F389833

General Info

Members Datasets Scaffolds Average Seq Length
290 156 580 416

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10090863|Ga0265338_100908632
Length 478
Sequence LPFLVSFPLHLNFIALGWASRLQWPPGAGRAYDSEEGGTGSQAWMVAKISRNVHRFPHQASAPVDLTLMRSRFFGVLASAVVFFLLPGETAVAQSTTLISLDQAIDLALVHNHSLKASRTLILQNQAQEITANLRPNPTLGVDTQFIPFFSPQDFSGTNLDQTQQFDIGLSYLFERGHKRQRRLQAARDQTAVTRAQITDAERTLAFNVGQQFVSVLLAESTLQFALEDLKDFQQTVDISQAQFKAGFIGEGDFLKIKLQLLQFQTDVSSARLARVQALVGLRQFLGYEAVPADFDVIGDLAYQTLQAKLEDLQMRALRERPDFRAAELGITAAQSQYLLAKANSKVDVTGTYDFNHVAGENTGSIFASFDLPIFNRNQGEIARTNYALAQAKEQEQSASDTVLSDVANAYEAVKSNDEVVQLYTSGYLKQAQDSRDISEYAYKRGAASLLDFLDAARSYRSTQLEQLKEALGTRNLP

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
56 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
57 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
58 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
99 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
100 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
103 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
104 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
105 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
106 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
107 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
110 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
111 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
112 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
115 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
116 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
117 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
118 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
119 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
127 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
128 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
129 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
138 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
139 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
140 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
141 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
142 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
145 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
156 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.28
Metatranscriptomes 1.72
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.45
Rhizosphere 96.55
Stem 0
Stem Tuber 0
Unclassified 13.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_10090863 3300028800 Bacteria 2525
2 LJNas_1000246 3300000546 Bacteria 9331
3 Ga0070683_100074324 3300005329 Bacteria 3174
4 Ga0070683_100173780 3300005329 Bacteria 2045
5 Ga0070690_100020061 3300005330 Bacteria 4068
6 Ga0068869_100083897 3300005334 Bacteria 2384
7 Ga0070680_100041217 3300005336 Bacteria 3743
8 Ga0070680_100059048 3300005336 Unclassified 3137
9 Ga0068868_100010638 3300005338 Bacteria 6668
10 Ga0070660_100048607 3300005339 Bacteria 3258
11 Ga0070661_100167342 3300005344 Bacteria 1668
12 Ga0070668_100003716 3300005347 Bacteria 11257
13 Ga0070709_10030036 3300005434 Bacteria 3258
14 Ga0070709_10044550 3300005434 Bacteria 2748
15 Ga0070709_10098496 3300005434 Bacteria 1943
16 Ga0070714_100010341 3300005435 Bacteria 7374
17 Ga0070714_100121161 3300005435 Bacteria 2327
18 Ga0070713_100001068 3300005436 Bacteria 17517
19 Ga0070713_100002633 3300005436 Bacteria 11707
20 Ga0070713_100008353 3300005436 Bacteria 7342
21 Ga0070713_100017131 3300005436 Bacteria 5470
22 Ga0070713_100021164 3300005436 Bacteria 4997
23 Ga0070710_10001433 3300005437 Bacteria 11266
24 Ga0070711_100000181 3300005439 Bacteria 33192
25 Ga0070711_100000272 3300005439 Bacteria 26766
26 Ga0070711_100027052 3300005439 Bacteria 3762
27 Ga0070711_100030162 3300005439 Unclassified 3587
28 Ga0070663_100059087 3300005455 Bacteria 2756
29 Ga0070663_100076389 3300005455 Bacteria 2450
30 Ga0070678_100046888 3300005456 Bacteria 3102
31 Ga0070681_10003509 3300005458 Bacteria 14690
32 Ga0070681_10010504 3300005458 Bacteria 9143
33 Ga0070679_100048483 3300005530 Bacteria 4232
34 Ga0070679_100075440 3300005530 Bacteria 3361
35 Ga0070679_100096141 3300005530 Bacteria 2950
36 Ga0070684_100143432 3300005535 Unclassified 2161
37 Ga0070697_100026276 3300005536 Bacteria 4649
38 Ga0068853_100019453 3300005539 Bacteria 5629
39 Ga0068853_100167056 3300005539 Unclassified 1989
40 Ga0070665_100052957 3300005548 Bacteria 4071
41 Ga0070664_100014678 3300005564 Bacteria 6396
42 Ga0068854_100017931 3300005578 Bacteria 4745
43 Ga0068854_100081420 3300005578 Unclassified 2391
44 Ga0068856_100010354 3300005614 Bacteria 9057
45 Ga0068856_100034330 3300005614 Bacteria 4968
46 Ga0068856_100093113 3300005614 Bacteria 2999
47 Ga0068852_100029113 3300005616 Bacteria 4531
48 Ga0068851_10050129 3300005834 Bacteria 2119
49 Ga0068863_100068568 3300005841 Bacteria 3355
50 Ga0068858_100010237 3300005842 Bacteria 8897
51 Ga0068858_100021679 3300005842 Bacteria 6004
52 Ga0068858_100169399 3300005842 Bacteria 2059
53 Ga0068858_100189375 3300005842 Bacteria 1944
54 Ga0068860_100045518 3300005843 Bacteria 4184
55 Ga0070717_10012056 3300006028 Bacteria 6585
56 Ga0070717_10044739 3300006028 Unclassified 3617
57 Ga0070715_10002623 3300006163 Bacteria 5557
58 Ga0070715_10015863 3300006163 Bacteria 2818
59 Ga0070716_100002278 3300006173 Bacteria 8837
60 Ga0070716_100025109 3300006173 Bacteria 3176
61 Ga0070712_100000164 3300006175 Bacteria 35998
62 Ga0070712_100000342 3300006175 Bacteria 26253
63 Ga0070712_100006915 3300006175 Bacteria 7068
64 Ga0070712_100036768 3300006175 Bacteria 3334
65 Ga0070712_100152812 3300006175 Unclassified 1774
66 Ga0097621_100000395 3300006237 Bacteria 30394
67 Ga0097621_100147337 3300006237 Unclassified 2016
68 Ga0097621_100296943 3300006237 Bacteria 1426
69 Ga0068871_100000105 3300006358 Bacteria 50666
70 Ga0068871_100005149 3300006358 Bacteria 9141
71 Ga0099794_10021401 3300007265 Bacteria 2938
72 Ga0105240_10006332 3300009093 Bacteria 17424
73 Ga0105240_10011434 3300009093 Bacteria 12364
74 Ga0105240_10057021 3300009093 Bacteria 4884
75 Ga0105240_10310575 3300009093 Bacteria 1801
76 Ga0105240_10460009 3300009093 Unclassified 1422
77 Ga0105245_10009997 3300009098 Bacteria 8261
78 Ga0105245_10013657 3300009098 Bacteria 7074
79 Ga0105241_10001007 3300009174 Bacteria 21393
80 Ga0105241_10007927 3300009174 Bacteria 7809
81 Ga0105248_10033795 3300009177 Bacteria 5715
82 Ga0105237_10040738 3300009545 Bacteria 4684
83 Ga0105237_10056744 3300009545 Bacteria 3919
84 Ga0105238_10002124 3300009551 Bacteria 20011
85 Ga0105238_10040299 3300009551 Bacteria 4734
86 Ga0105238_10174279 3300009551 Bacteria 2127
87 Ga0105249_10014461 3300009553 Bacteria 6976
88 Ga0105249_10048955 3300009553 Bacteria 3854
89 Ga0157373_10003057 3300013100 Bacteria 12628
90 Ga0157373_10007560 3300013100 Bacteria 8076
91 Ga0157369_10017358 3300013105 Bacteria 8090
92 Ga0157369_10032254 3300013105 Bacteria 5762
93 Ga0157369_10152202 3300013105 Bacteria 2445
94 Ga0157374_10003607 3300013296 Bacteria 13033
95 Ga0157374_10007548 3300013296 Bacteria 9279
96 Ga0157374_10187677 3300013296 Bacteria 2021
97 Ga0157378_10102924 3300013297 Bacteria 2608
98 Ga0163162_10001151 3300013306 Bacteria 24684
99 Ga0163162_10039081 3300013306 Bacteria 4739
100 Ga0163162_10226183 3300013306 Bacteria 2001
101 Ga0157372_10000497 3300013307 Bacteria 43246
102 Ga0157372_10018571 3300013307 Bacteria 7480
103 Ga0157372_10056054 3300013307 Bacteria 4403
104 Ga0157372_10069441 3300013307 Bacteria 3962
105 Ga0157375_10022079 3300013308 Bacteria 5853
106 Ga0157379_10000722 3300014968 Bacteria 26745
107 Ga0157376_10009920 3300014969 Bacteria 6946
108 Ga0224569_100816 3300022732 Bacteria 2633
109 Ga0224572_1002920 3300024225 Bacteria 2827
110 Ga0224572_1009174 3300024225 Bacteria 1841
111 Ga0228598_1000186 3300024227 Bacteria 11236
112 Ga0228598_1004273 3300024227 Bacteria 3025
113 Ga0228598_1007455 3300024227 Unclassified 2226
114 Ga0228598_1014762 3300024227 Bacteria 1544
115 Ga0207656_10026785 3300025321 Unclassified 2353
116 Ga0207692_10005326 3300025898 Bacteria 5148
117 Ga0207685_10014055 3300025905 Bacteria 2496
118 Ga0207699_10071508 3300025906 Bacteria 2122
119 Ga0207699_10140920 3300025906 Unclassified 1585
120 Ga0207645_10004653 3300025907 Bacteria 10108
121 Ga0207705_10000024 3300025909 Bacteria 259977
122 Ga0207654_10008664 3300025911 Bacteria 5155
123 Ga0207654_10011546 3300025911 Unclassified 4507
124 Ga0207707_10001653 3300025912 Bacteria 20580
125 Ga0207707_10003747 3300025912 Bacteria 13476
126 Ga0207707_10040632 3300025912 Unclassified 4062
127 Ga0207695_10000398 3300025913 Bacteria 97114
128 Ga0207695_10013578 3300025913 Bacteria 9701
129 Ga0207695_10015998 3300025913 Bacteria 8806
130 Ga0207695_10019429 3300025913 Bacteria 7825
131 Ga0207695_10064720 3300025913 Bacteria 3763
132 Ga0207695_10068369 3300025913 Unclassified 3640
133 Ga0207695_10285333 3300025913 Bacteria 1544
134 Ga0207671_10075221 3300025914 Bacteria 2525
135 Ga0207693_10000020 3300025915 Bacteria 132847
136 Ga0207693_10000411 3300025915 Bacteria 38941
137 Ga0207693_10036521 3300025915 Bacteria 3873
138 Ga0207693_10094017 3300025915 Bacteria 2350
139 Ga0207693_10125051 3300025915 Bacteria 2021
140 Ga0207693_10147000 3300025915 Bacteria 1853
141 Ga0207660_10031792 3300025917 Bacteria 3639
142 Ga0207649_10041115 3300025920 Unclassified 2813
143 Ga0207652_10016293 3300025921 Bacteria 6066
144 Ga0207652_10080158 3300025921 Bacteria 2853
145 Ga0207694_10003241 3300025924 Bacteria 12967
146 Ga0207694_10003688 3300025924 Bacteria 12128
147 Ga0207687_10001000 3300025927 Bacteria 19174
148 Ga0207687_10008360 3300025927 Bacteria 6771
149 Ga0207700_10004111 3300025928 Bacteria 8536
150 Ga0207700_10011856 3300025928 Bacteria 5584
151 Ga0207700_10017117 3300025928 Bacteria 4833
152 Ga0207700_10059677 3300025928 Unclassified 2886
153 Ga0207664_10000031 3300025929 Bacteria 179373
154 Ga0207664_10001361 3300025929 Bacteria 16057
155 Ga0207664_10016288 3300025929 Bacteria 5421
156 Ga0207706_10011295 3300025933 Bacteria 8140
157 Ga0207665_10002930 3300025939 Bacteria 11431
158 Ga0207665_10004107 3300025939 Bacteria 9708
159 Ga0207665_10127045 3300025939 Bacteria 1806
160 Ga0207711_10007186 3300025941 Bacteria 9333
161 Ga0207711_10018187 3300025941 Bacteria 5843
162 Ga0207689_10032610 3300025942 Bacteria 4331
163 Ga0207661_10134691 3300025944 Unclassified 2121
164 Ga0207661_10180025 3300025944 Unclassified 1846
165 Ga0207667_10000802 3300025949 Bacteria 40809
166 Ga0207667_10001656 3300025949 Bacteria 28065
167 Ga0207667_10005505 3300025949 Bacteria 15440
168 Ga0207667_10006303 3300025949 Bacteria 14391
169 Ga0207712_10039236 3300025961 Unclassified 3243
170 Ga0207668_10007298 3300025972 Bacteria 6565
171 Ga0207640_10093865 3300025981 Unclassified 2085
172 Ga0207677_10003557 3300026023 Bacteria 8257
173 Ga0207703_10006847 3300026035 Bacteria 9078
174 Ga0207703_10050659 3300026035 Bacteria 3362
175 Ga0207678_10000203 3300026067 Bacteria 52330
176 Ga0207678_10000765 3300026067 Bacteria 29351
177 Ga0207702_10001466 3300026078 Bacteria 23418
178 Ga0207702_10005687 3300026078 Bacteria 10873
179 Ga0207702_10037811 3300026078 Bacteria 4041
180 Ga0207702_10252762 3300026078 Unclassified 1656
181 Ga0207648_10031718 3300026089 Bacteria 4670
182 Ga0207674_10005435 3300026116 Bacteria 15129
183 Ga0207675_100159978 3300026118 Bacteria 2147
184 Ga0207683_10064922 3300026121 Bacteria 3217
185 Ga0209588_1009757 3300027671 Bacteria 2873
186 Ga0265356_1000042 3300028017 Bacteria 20781
187 Ga0268266_10042692 3300028379 Bacteria 3874
188 Ga0268265_10038049 3300028380 Bacteria 3536
189 Ga0268264_10209666 3300028381 Bacteria 1788
190 Ga0265318_10036966 3300028577 Bacteria 1872
191 Ga0265323_10007603 3300028653 Bacteria 4496
192 Ga0265338_10001623 3300028800 Bacteria 35998
193 Ga0265338_10003417 3300028800 Bacteria 22394
194 Ga0265338_10019930 3300028800 Bacteria 7082
195 Ga0265338_10071936 3300028800 Unclassified 2955
196 Ga0265338_10107744 3300028800 Bacteria 2252
197 Ga0265762_1000521 3300030760 Bacteria 6732
198 Ga0265760_10000491 3300031090 Bacteria 11104
199 Ga0265760_10003365 3300031090 Bacteria 4664
200 Ga0265760_10004573 3300031090 Unclassified 3964
201 Ga0265760_10008046 3300031090 Bacteria 3012
202 Ga0265330_10015971 3300031235 Bacteria 3469
203 Ga0265340_10001601 3300031247 Bacteria 12997
204 Ga0265340_10002684 3300031247 Bacteria 10120
205 Ga0265340_10063083 3300031247 Unclassified 1769
206 Ga0265339_10006515 3300031249 Bacteria 7653
207 Ga0265339_10011141 3300031249 Bacteria 5551
208 Ga0265339_10040180 3300031249 Bacteria 2601
209 Ga0265339_10047893 3300031249 Unclassified 2346
210 Ga0265331_10003246 3300031250 Bacteria 10598
211 Ga0265316_10010129 3300031344 Bacteria 8606
212 Ga0265316_10031120 3300031344 Unclassified 4366
213 Ga0265316_10050150 3300031344 Unclassified 3284
214 Ga0265316_10085618 3300031344 Unclassified 2411
215 Ga0265313_10013438 3300031595 Plasmid 4914
216 Ga0265314_10000276 3300031711 Bacteria 74723
217 Ga0265314_10002186 3300031711 Bacteria 20449
218 Ga0265314_10009114 3300031711 Bacteria 8427
219 Ga0265342_10001464 3300031712 Bacteria 21962
220 Ga0265342_10010263 3300031712 Bacteria 6520
221 Ga0265342_10019725 3300031712 Unclassified 4338
222 Ga0373936_0000203 3300035113 Bacteria 19800
223 Ga0373945_0009670 3300035116 Bacteria 3162
224 Ga0373953_0013248 3300035117 Bacteria 2941
225 Ga0373956_0008780 3300035119 Bacteria 4094
226 Ga0373957_0020905 3300035120 Bacteria 2317
227 Ga0373943_0001053 3300035170 Bacteria 12241
228 Ga0373943_0072805 3300035170 Bacteria 1744
229 Ga0373955_0001001 3300035172 Bacteria 11999
230 Ga0373955_0126579 3300035172 Bacteria 1489
231 Ga0373924_0006408 3300035410 Bacteria 4216
232 Ga0373924_0023642 3300035410 Unclassified 2414
233 Ga0373927_0000213 3300035695 Bacteria 46171
234 Ga0373927_0005896 3300035695 Bacteria 8395
235 Ga0373933_0000271 3300035724 Bacteria 33675
236 Ga0373947_0000516 3300035725 Bacteria 22506
237 Ga0373937_0000001 3300036401 Bacteria 478903
238 Ga0373937_0003041 3300036401 Bacteria 14071
239 Ga0373937_0184744 3300036401 Bacteria 1958
240 Ga0373925_0007793 3300037068 Bacteria 7796
241 Ga0373925_0035400 3300037068 Bacteria 3683
242 Ga0466959_0077494 3300045049 Bacteria 2399
243 Ga0466967_0017802 3300045976 Bacteria 5656
244 Ga0495592_0001700 3300046454 Bacteria 15471
245 Ga0495651_0000389 3300046462 Bacteria 33943
246 Ga0495580_0000027 3300046472 Bacteria 81294
247 Ga0495580_0002519 3300046472 Bacteria 15983
248 Ga0495580_0006068 3300046472 Bacteria 9890
249 Ga0495580_0026005 3300046472 Bacteria 4271
250 Ga0495582_0000997 3300046473 Bacteria 15865
251 Ga0495664_0002601 3300046477 Bacteria 9704
252 Ga0495664_0067479 3300046477 Bacteria 2134
253 Ga0495628_0000883 3300046516 Bacteria 27641
254 Ga0495628_0124191 3300046516 Unclassified 1978
255 Ga0495630_0001397 3300046517 Bacteria 16692
256 Ga0495630_0181670 3300046517 Bacteria 1604
257 Ga0495652_0005527 3300046529 Bacteria 11888
258 Ga0495587_0001178 3300046536 Bacteria 17245
259 Ga0495587_0022546 3300046536 Bacteria 3877
260 Ga0495645_0003419 3300046543 Bacteria 10762
261 Ga0495645_0019439 3300046543 Bacteria 4891
262 Ga0495667_0000846 3300046559 Bacteria 19793
263 Ga0495634_0065324 3300046642 Bacteria 2412
264 Ga0495599_0006185 3300046678 Bacteria 7216
265 Ga0495599_0081542 3300046678 Bacteria 2021
266 Ga0495646_0032877 3300046680 Bacteria 3226
267 Ga0495658_0044056 3300046683 Bacteria 2499
268 Ga0495613_0049671 3300046689 Bacteria 3095
269 Ga0495604_0044885 3300047317 Bacteria 3451
270 Ga0495604_0053803 3300047317 Unclassified 3109
271 Ga0495674_0000882 3300047319 Bacteria 28766
272 Ga0495674_0001062 3300047319 Bacteria 26427
273 Ga0495680_0005661 3300047322 Bacteria 11705
274 Ga0495675_0000455 3300047444 Bacteria 27052
275 Ga0495684_0000887 3300047471 Bacteria 24239
276 Ga0495602_0000086 3300048088 Bacteria 90226
277 Ga0495602_0059281 3300048088 Bacteria 3343
278 Ga0495602_0156897 3300048088 Unclassified 1781
279 Ga0496101_0022449 3300048904 Bacteria 4344
280 Ga0496102_0258011 3300048905 Bacteria 1643
281 Ga0496103_0089267 3300048906 Bacteria 1944
282 Ga0496104_0032623 3300048907 Unclassified 4848
283 Ga0496104_0157323 3300048907 Unclassified 2181
284 Ga0496105_0098373 3300048908 Bacteria 2416
285 Ga0496106_0118548 3300048909 Bacteria 2067
286 Ga0496112_0005362 3300048915 Bacteria 11080
287 Ga0496112_0218129 3300048915 Unclassified 1864
288 Ga0496115_0010615 3300048918 Bacteria 6888
289 Ga0495601_0010379 3300053077 Bacteria 5541
290 Ga0495619_0066995 3300053085 Unclassified 2397
291 Ga0265338_10090863
292 LJNas_1000246
293 Ga0070683_100074324
294 Ga0070683_100173780
295 Ga0070690_100020061
296 Ga0068869_100083897
297 Ga0070680_100041217
298 Ga0070680_100059048
299 Ga0068868_100010638
300 Ga0070660_100048607
301 Ga0070661_100167342
302 Ga0070668_100003716
303 Ga0070709_10030036
304 Ga0070709_10044550
305 Ga0070709_10098496
306 Ga0070714_100010341
307 Ga0070714_100121161
308 Ga0070713_100001068
309 Ga0070713_100002633
310 Ga0070713_100008353
311 Ga0070713_100017131
312 Ga0070713_100021164
313 Ga0070710_10001433
314 Ga0070711_100000181
315 Ga0070711_100000272
316 Ga0070711_100027052
317 Ga0070711_100030162
318 Ga0070663_100059087
319 Ga0070663_100076389
320 Ga0070678_100046888
321 Ga0070681_10003509
322 Ga0070681_10010504
323 Ga0070679_100048483
324 Ga0070679_100075440
325 Ga0070679_100096141
326 Ga0070684_100143432
327 Ga0070697_100026276
328 Ga0068853_100019453
329 Ga0068853_100167056
330 Ga0070665_100052957
331 Ga0070664_100014678
332 Ga0068854_100017931
333 Ga0068854_100081420
334 Ga0068856_100010354
335 Ga0068856_100034330
336 Ga0068856_100093113
337 Ga0068852_100029113
338 Ga0068851_10050129
339 Ga0068863_100068568
340 Ga0068858_100010237
341 Ga0068858_100021679
342 Ga0068858_100169399
343 Ga0068858_100189375
344 Ga0068860_100045518
345 Ga0070717_10012056
346 Ga0070717_10044739
347 Ga0070715_10002623
348 Ga0070715_10015863
349 Ga0070716_100002278
350 Ga0070716_100025109
351 Ga0070712_100000164
352 Ga0070712_100000342
353 Ga0070712_100006915
354 Ga0070712_100036768
355 Ga0070712_100152812
356 Ga0097621_100000395
357 Ga0097621_100147337
358 Ga0097621_100296943
359 Ga0068871_100000105
360 Ga0068871_100005149
361 Ga0099794_10021401
362 Ga0105240_10006332
363 Ga0105240_10011434
364 Ga0105240_10057021
365 Ga0105240_10310575
366 Ga0105240_10460009
367 Ga0105245_10009997
368 Ga0105245_10013657
369 Ga0105241_10001007
370 Ga0105241_10007927
371 Ga0105248_10033795
372 Ga0105237_10040738
373 Ga0105237_10056744
374 Ga0105238_10002124
375 Ga0105238_10040299
376 Ga0105238_10174279
377 Ga0105249_10014461
378 Ga0105249_10048955
379 Ga0157373_10003057
380 Ga0157373_10007560
381 Ga0157369_10017358
382 Ga0157369_10032254
383 Ga0157369_10152202
384 Ga0157374_10003607
385 Ga0157374_10007548
386 Ga0157374_10187677
387 Ga0157378_10102924
388 Ga0163162_10001151
389 Ga0163162_10039081
390 Ga0163162_10226183
391 Ga0157372_10000497
392 Ga0157372_10018571
393 Ga0157372_10056054
394 Ga0157372_10069441
395 Ga0157375_10022079
396 Ga0157379_10000722
397 Ga0157376_10009920
398 Ga0224569_100816
399 Ga0224572_1002920
400 Ga0224572_1009174
401 Ga0228598_1000186
402 Ga0228598_1004273
403 Ga0228598_1007455
404 Ga0228598_1014762
405 Ga0207656_10026785
406 Ga0207692_10005326
407 Ga0207685_10014055
408 Ga0207699_10071508
409 Ga0207699_10140920
410 Ga0207645_10004653
411 Ga0207705_10000024
412 Ga0207654_10008664
413 Ga0207654_10011546
414 Ga0207707_10001653
415 Ga0207707_10003747
416 Ga0207707_10040632
417 Ga0207695_10000398
418 Ga0207695_10013578
419 Ga0207695_10015998
420 Ga0207695_10019429
421 Ga0207695_10064720
422 Ga0207695_10068369
423 Ga0207695_10285333
424 Ga0207671_10075221
425 Ga0207693_10000020
426 Ga0207693_10000411
427 Ga0207693_10036521
428 Ga0207693_10094017
429 Ga0207693_10125051
430 Ga0207693_10147000
431 Ga0207660_10031792
432 Ga0207649_10041115
433 Ga0207652_10016293
434 Ga0207652_10080158
435 Ga0207694_10003241
436 Ga0207694_10003688
437 Ga0207687_10001000
438 Ga0207687_10008360
439 Ga0207700_10004111
440 Ga0207700_10011856
441 Ga0207700_10017117
442 Ga0207700_10059677
443 Ga0207664_10000031
444 Ga0207664_10001361
445 Ga0207664_10016288
446 Ga0207706_10011295
447 Ga0207665_10002930
448 Ga0207665_10004107
449 Ga0207665_10127045
450 Ga0207711_10007186
451 Ga0207711_10018187
452 Ga0207689_10032610
453 Ga0207661_10134691
454 Ga0207661_10180025
455 Ga0207667_10000802
456 Ga0207667_10001656
457 Ga0207667_10005505
458 Ga0207667_10006303
459 Ga0207712_10039236
460 Ga0207668_10007298
461 Ga0207640_10093865
462 Ga0207677_10003557
463 Ga0207703_10006847
464 Ga0207703_10050659
465 Ga0207678_10000203
466 Ga0207678_10000765
467 Ga0207702_10001466
468 Ga0207702_10005687
469 Ga0207702_10037811
470 Ga0207702_10252762
471 Ga0207648_10031718
472 Ga0207674_10005435
473 Ga0207675_100159978
474 Ga0207683_10064922
475 Ga0209588_1009757
476 Ga0265356_1000042
477 Ga0268266_10042692
478 Ga0268265_10038049
479 Ga0268264_10209666
480 Ga0265318_10036966
481 Ga0265323_10007603
482 Ga0265338_10001623
483 Ga0265338_10003417
484 Ga0265338_10019930
485 Ga0265338_10071936
486 Ga0265338_10107744
487 Ga0265762_1000521
488 Ga0265760_10000491
489 Ga0265760_10003365
490 Ga0265760_10004573
491 Ga0265760_10008046
492 Ga0265330_10015971
493 Ga0265340_10001601
494 Ga0265340_10002684
495 Ga0265340_10063083
496 Ga0265339_10006515
497 Ga0265339_10011141
498 Ga0265339_10040180
499 Ga0265339_10047893
500 Ga0265331_10003246
501 Ga0265316_10010129
502 Ga0265316_10031120
503 Ga0265316_10050150
504 Ga0265316_10085618
505 Ga0265313_10013438
506 Ga0265314_10000276
507 Ga0265314_10002186
508 Ga0265314_10009114
509 Ga0265342_10001464
510 Ga0265342_10010263
511 Ga0265342_10019725
512 Ga0373936_0000203
513 Ga0373945_0009670
514 Ga0373953_0013248
515 Ga0373956_0008780
516 Ga0373957_0020905
517 Ga0373943_0001053
518 Ga0373943_0072805
519 Ga0373955_0001001
520 Ga0373955_0126579
521 Ga0373924_0006408
522 Ga0373924_0023642
523 Ga0373927_0000213
524 Ga0373927_0005896
525 Ga0373933_0000271
526 Ga0373947_0000516
527 Ga0373937_0000001
528 Ga0373937_0003041
529 Ga0373937_0184744
530 Ga0373925_0007793
531 Ga0373925_0035400
532 Ga0466959_0077494
533 Ga0466967_0017802
534 Ga0495592_0001700
535 Ga0495651_0000389
536 Ga0495580_0000027
537 Ga0495580_0002519
538 Ga0495580_0006068
539 Ga0495580_0026005
540 Ga0495582_0000997
541 Ga0495664_0002601
542 Ga0495664_0067479
543 Ga0495628_0000883
544 Ga0495628_0124191
545 Ga0495630_0001397
546 Ga0495630_0181670
547 Ga0495652_0005527
548 Ga0495587_0001178
549 Ga0495587_0022546
550 Ga0495645_0003419
551 Ga0495645_0019439
552 Ga0495667_0000846
553 Ga0495634_0065324
554 Ga0495599_0006185
555 Ga0495599_0081542
556 Ga0495646_0032877
557 Ga0495658_0044056
558 Ga0495613_0049671
559 Ga0495604_0044885
560 Ga0495604_0053803
561 Ga0495674_0000882
562 Ga0495674_0001062
563 Ga0495680_0005661
564 Ga0495675_0000455
565 Ga0495684_0000887
566 Ga0495602_0000086
567 Ga0495602_0059281
568 Ga0495602_0156897
569 Ga0496101_0022449
570 Ga0496102_0258011
571 Ga0496103_0089267
572 Ga0496104_0032623
573 Ga0496104_0157323
574 Ga0496105_0098373
575 Ga0496106_0118548
576 Ga0496112_0005362
577 Ga0496112_0218129
578 Ga0496115_0010615
579 Ga0495601_0010379
580 Ga0495619_0066995

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02321

OEP

Outer membrane efflux protein

101

287

0.99

PF02321

OEP

Outer membrane efflux protein

310

476

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f1m-assembly2.cif.gz_C conformational flexibility in the multidrug efflux system protein acra 0.9582 134 204
2f1m-assembly1.cif.gz_B conformational flexibility in the multidrug efflux system protein acra 0.911 134 204
6wxh-assembly1.cif.gz_B colicin e1 fragment in nanodisc-embedded tolc 0.7693 19 408
7akz-assembly1.cif.gz_A deciphering the role of the channel constrictions in the opening mechanism of mexab-oprm efflux pump from pseudomonas aeruginosa 0.7673 20 406
6zre-assembly2.cif.gz_B deciphering the role of the channel constrictions in the opening mechanism of mexab-oprm efflux pump from pseudomonas aeruginosa 0.7606 20 406
ID Description Score Start End Superfamily
2f1mC03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9589 134 201 1.10.287.470
1t5eA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9322 138 192 1.10.287.470
2f1mA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9277 138 201 1.10.287.470
1t5eG03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9266 138 192 1.10.287.470
1t5eB03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9234 138 192 1.10.287.470
ID Description Score Start End GO Terms
AF-H5SCJ3-F1-model_v4 Hypothetical conserved protein 0.886 4 410 GO:0015562
AF-A0A4Q7ITQ5-F1-model_v4 Uncharacterized protein 0.8813 227 405 GO:0015562
AF-A0A5C6AWU6-F1-model_v4 Cobalt-zinc-cadmium resistance protein CzcC 0.8804 1 405 GO:0015562
AF-A0A5C5WB80-F1-model_v4 Cobalt-zinc-cadmium resistance protein CzcC 0.8682 6 406 GO:0015562
AF-A0A2T2UK37-F1-model_v4 TolC family protein 0.8665 118 406 GO:0009279
GO:0015288
GO:0015562
GO:1990281

Map