F389158

General Info

Members Datasets Scaffolds Average Seq Length
289 168 578 348

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10278158|Ga0105243_102781582
Length 380
Sequence MHVIFMDILTSRGGWLHGDGGAEMSVLDPCLTRSRGPSGEPVVRLGVALLDDYLEFLAGRSRPNTVLAAAYDLKVFFAVVAKAPGQVAPADVLGFITAQRTGRVGERAVVQALEVDGELGGVSTTTAARRLSVVSGFFAFLQVRGDVATNPVPRGLPTRRQRSRPGQGVPLTRRTRRLPKILNPGEVDALTAALRTHRDRAMVAAMVLGGLRRCEVLGLRMEDLRVGERRVFIAEGKGGHQRLVPVSARFFVAVQAYLQAERPPGLGTDSVSVVLKGPRRGQPLAVRGLDEILSGARRRAGLDHATCHELRHTCLTRLREAGMALEAVQAQAGHASIEPTWIYLHLADDWLASQYRKAAEVIDAQVFAAHPAAAGIGGRR

Samples

Sample ID Description Type Environment
1 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
96 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
97 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
98 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
99 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
102 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
111 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
112 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
118 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
129 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
130 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
131 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
134 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
135 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
136 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
137 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
160 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
166 2643221711 Terrabacter sp. Root85 Isolate Unclassified
167 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
168 2891554331 Microbispora sp. CL1-1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.62
Metatranscriptomes 0
Isolates 1.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.84
Rhizosphere 91.7
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105243_10278158 3300009148 Bacteria 1506
2 JGI24744J21845_10006909 3300002077 Bacteria 2345
3 Ga0070658_10127856 3300005327 Bacteria 2116
4 Ga0070683_100079246 3300005329 Bacteria 3074
5 Ga0068869_100049712 3300005334 Bacteria 3037
6 Ga0068868_100067103 3300005338 Bacteria 2854
7 Ga0068868_100344776 3300005338 Bacteria 1274
8 Ga0070691_10035787 3300005341 Bacteria 2339
9 Ga0070661_100050255 3300005344 Bacteria 3051
10 Ga0070692_10019342 3300005345 Bacteria 3285
11 Ga0070675_100001863 3300005354 Bacteria 15540
12 Ga0070674_100024560 3300005356 Bacteria 3913
13 Ga0070659_100126954 3300005366 Bacteria 2070
14 Ga0070659_100223718 3300005366 Bacteria 1554
15 Ga0070709_10002509 3300005434 Bacteria 9935
16 Ga0070709_10072484 3300005434 Bacteria 2227
17 Ga0070709_10313906 3300005434 Bacteria 1148
18 Ga0070714_100009466 3300005435 Bacteria 7660
19 Ga0070714_100019589 3300005435 Bacteria 5516
20 Ga0070714_100057546 3300005435 Bacteria 3328
21 Ga0070714_100064051 3300005435 Bacteria 3163
22 Ga0070714_100108036 3300005435 Bacteria 2459
23 Ga0070714_100150880 3300005435 Bacteria 2094
24 Ga0070714_100178622 3300005435 Bacteria 1930
25 Ga0070714_100694534 3300005435 Bacteria 981
26 Ga0070713_100087648 3300005436 Bacteria 2670
27 Ga0070713_100102171 3300005436 Bacteria 2485
28 Ga0070713_100103598 3300005436 Bacteria 2469
29 Ga0070713_100164950 3300005436 Bacteria 1980
30 Ga0070713_100270248 3300005436 Bacteria 1557
31 Ga0070713_100506616 3300005436 Bacteria 1139
32 Ga0070710_10032627 3300005437 Bacteria 2822
33 Ga0070710_10045004 3300005437 Bacteria 2451
34 Ga0070711_100004084 3300005439 Bacteria 8583
35 Ga0070711_100102106 3300005439 Bacteria 2088
36 Ga0070711_100144341 3300005439 Bacteria 1788
37 Ga0070700_100034503 3300005441 Bacteria 3056
38 Ga0070700_100064911 3300005441 Bacteria 2313
39 Ga0070708_100020721 3300005445 Bacteria 5551
40 Ga0070708_100044160 3300005445 Bacteria 3918
41 Ga0070708_100074502 3300005445 Bacteria 3061
42 Ga0070708_100112161 3300005445 Bacteria 2507
43 Ga0070708_100138795 3300005445 Bacteria 2253
44 Ga0070708_100254208 3300005445 Bacteria 1651
45 Ga0070663_100073608 3300005455 Bacteria 2492
46 Ga0070662_100069453 3300005457 Bacteria 2593
47 Ga0070706_100079667 3300005467 Bacteria 3032
48 Ga0070706_100080558 3300005467 Bacteria 3016
49 Ga0070707_100060595 3300005468 Bacteria 3629
50 Ga0070707_100136637 3300005468 Bacteria 2385
51 Ga0070699_100069989 3300005518 Bacteria 3049
52 Ga0070699_100161218 3300005518 Bacteria 1985
53 Ga0070679_100156592 3300005530 Bacteria 2253
54 Ga0070684_100084376 3300005535 Bacteria 2816
55 Ga0070697_100016470 3300005536 Bacteria 5815
56 Ga0070697_100130395 3300005536 Bacteria 2108
57 Ga0070697_100186326 3300005536 Bacteria 1760
58 Ga0070672_100133043 3300005543 Bacteria 2046
59 Ga0070672_100302520 3300005543 Bacteria 1356
60 Ga0070664_100042701 3300005564 Bacteria 3827
61 Ga0070664_100081706 3300005564 Bacteria 2786
62 Ga0068857_100027150 3300005577 Bacteria 5050
63 Ga0068856_100110107 3300005614 Bacteria 2751
64 Ga0068861_100036299 3300005719 Bacteria 3657
65 Ga0068870_10124882 3300005840 Bacteria 1487
66 Ga0068862_100022375 3300005844 Bacteria 5289
67 Ga0070717_10020126 3300006028 Bacteria 5244
68 Ga0070717_10052815 3300006028 Bacteria 3349
69 Ga0070717_10055331 3300006028 Bacteria 3273
70 Ga0070717_10105499 3300006028 Bacteria 2398
71 Ga0070717_10138391 3300006028 Bacteria 2098
72 Ga0070717_10319795 3300006028 Bacteria 1382
73 Ga0070715_10018071 3300006163 Bacteria 2681
74 Ga0070716_100016914 3300006173 Bacteria 3772
75 Ga0070716_100027812 3300006173 Bacteria 3041
76 Ga0070716_100089501 3300006173 Bacteria 1859
77 Ga0070716_100099914 3300006173 Bacteria 1776
78 Ga0070712_100057059 3300006175 Bacteria 2741
79 Ga0070712_100087277 3300006175 Bacteria 2276
80 Ga0070712_100097365 3300006175 Bacteria 2168
81 Ga0070712_100099296 3300006175 Bacteria 2148
82 Ga0075428_100325182 3300006844 Bacteria 1652
83 Ga0075428_100390822 3300006844 Bacteria 1491
84 Ga0075433_10154450 3300006852 Bacteria 2042
85 Ga0075434_100105342 3300006871 Bacteria 2830
86 Ga0075434_100133758 3300006871 Bacteria 2499
87 Ga0068865_100040766 3300006881 Bacteria 3158
88 Ga0075436_100053988 3300006914 Bacteria 2773
89 Ga0075436_100098713 3300006914 Bacteria 2033
90 Ga0075436_100305413 3300006914 Bacteria 1141
91 Ga0075435_100013916 3300007076 Bacteria 6000
92 Ga0075435_100036778 3300007076 Bacteria 3893
93 Ga0111539_10142936 3300009094 Bacteria 2801
94 Ga0105245_10083761 3300009098 Bacteria 2920
95 Ga0114129_10208505 3300009147 Bacteria 2643
96 Ga0114129_10351700 3300009147 Bacteria 1952
97 Ga0105243_10053120 3300009148 Bacteria 3213
98 Ga0105248_10683477 3300009177 Bacteria 1158
99 Ga0105239_10656238 3300010375 Bacteria 1198
100 Ga0157372_10228013 3300013307 Bacteria 2159
101 Ga0157372_10680887 3300013307 Bacteria 1197
102 Ga0157375_10012626 3300013308 Bacteria 7496
103 Ga0157380_10224816 3300014326 Bacteria 1682
104 Ga0157380_10361085 3300014326 Bacteria 1363
105 Ga0157377_10117491 3300014745 Bacteria 1607
106 Ga0157376_10354915 3300014969 Bacteria 1404
107 Ga0213876_10023382 3300021384 Bacteria 3265
108 Ga0207692_10040090 3300025898 Bacteria 2309
109 Ga0207692_10040539 3300025898 Bacteria 2298
110 Ga0207692_10041621 3300025898 Bacteria 2276
111 Ga0207685_10016176 3300025905 Bacteria 2382
112 Ga0207685_10017880 3300025905 Bacteria 2304
113 Ga0207685_10046776 3300025905 Bacteria 1648
114 Ga0207699_10074253 3300025906 Bacteria 2088
115 Ga0207699_10168828 3300025906 Bacteria 1462
116 Ga0207699_10243598 3300025906 Bacteria 1236
117 Ga0207645_10019844 3300025907 Bacteria 4402
118 Ga0207643_10137961 3300025908 Bacteria 1455
119 Ga0207684_10039116 3300025910 Bacteria 4025
120 Ga0207684_10071016 3300025910 Bacteria 2959
121 Ga0207684_10292166 3300025910 Bacteria 1405
122 Ga0207693_10068959 3300025915 Bacteria 2768
123 Ga0207693_10076868 3300025915 Bacteria 2614
124 Ga0207693_10101143 3300025915 Bacteria 2260
125 Ga0207693_10122581 3300025915 Bacteria 2042
126 Ga0207663_10001083 3300025916 Bacteria 12492
127 Ga0207663_10079700 3300025916 Bacteria 2139
128 Ga0207663_10158881 3300025916 Bacteria 1593
129 Ga0207649_10043216 3300025920 Bacteria 2754
130 Ga0207649_10063071 3300025920 Bacteria 2338
131 Ga0207652_10121667 3300025921 Bacteria 2322
132 Ga0207646_10020921 3300025922 Bacteria 6054
133 Ga0207646_10117610 3300025922 Bacteria 2387
134 Ga0207659_10055033 3300025926 Bacteria 2843
135 Ga0207687_10054715 3300025927 Bacteria 2793
136 Ga0207700_10053182 3300025928 Bacteria 3032
137 Ga0207700_10055831 3300025928 Bacteria 2970
138 Ga0207700_10077570 3300025928 Bacteria 2581
139 Ga0207700_10077655 3300025928 Bacteria 2580
140 Ga0207700_10296351 3300025928 Bacteria 1395
141 Ga0207700_10438255 3300025928 Bacteria 1150
142 Ga0207664_10015113 3300025929 Bacteria 5592
143 Ga0207664_10067647 3300025929 Bacteria 2867
144 Ga0207664_10078205 3300025929 Bacteria 2682
145 Ga0207664_10088227 3300025929 Bacteria 2537
146 Ga0207664_10097931 3300025929 Bacteria 2417
147 Ga0207664_10112997 3300025929 Bacteria 2261
148 Ga0207664_10305124 3300025929 Bacteria 1401
149 Ga0207664_10413670 3300025929 Bacteria 1200
150 Ga0207690_10161706 3300025932 Bacteria 1670
151 Ga0207706_10031190 3300025933 Bacteria 4750
152 Ga0207669_10042281 3300025937 Bacteria 2659
153 Ga0207704_10032810 3300025938 Bacteria 2944
154 Ga0207665_10021391 3300025939 Bacteria 4253
155 Ga0207665_10054557 3300025939 Bacteria 2695
156 Ga0207665_10065130 3300025939 Bacteria 2477
157 Ga0207691_10143134 3300025940 Bacteria 2106
158 Ga0207691_10382160 3300025940 Bacteria 1202
159 Ga0207711_10072955 3300025941 Bacteria 2982
160 Ga0207689_10056671 3300025942 Bacteria 3225
161 Ga0207661_10075030 3300025944 Bacteria 2773
162 Ga0207679_10059223 3300025945 Bacteria 2841
163 Ga0207679_10071193 3300025945 Bacteria 2622
164 Ga0207668_10096551 3300025972 Bacteria 2185
165 Ga0207677_10034556 3300026023 Bacteria 3274
166 Ga0207678_10080019 3300026067 Bacteria 2797
167 Ga0207708_10018109 3300026075 Bacteria 5301
168 Ga0207708_10022295 3300026075 Bacteria 4782
169 Ga0207674_10027517 3300026116 Bacteria 6013
170 Ga0207675_100286520 3300026118 Bacteria 1601
171 Ga0207428_10069739 3300027907 Bacteria 2764
172 Ga0307513_10034468 3300031456 Bacteria 5680
173 Ga0307516_10074502 3300031730 Bacteria 3250
174 Ga0307413_10044460 3300031824 Bacteria 2625
175 Ga0307410_10034046 3300031852 Bacteria 3295
176 Ga0307410_10066465 3300031852 Bacteria 2484
177 Ga0307407_10042354 3300031903 Bacteria 2553
178 Ga0307409_100067460 3300031995 Bacteria 2825
179 Ga0307415_100077204 3300032126 Bacteria 2364
180 Ga0373949_0009596 3300035090 Bacteria 2120
181 Ga0373952_0002672 3300035092 Bacteria 3217
182 Ga0373941_0052838 3300035115 Bacteria 1297
183 Ga0373945_0030240 3300035116 Bacteria 1908
184 Ga0373957_0066093 3300035120 Bacteria 1408
185 Ga0373957_0096597 3300035120 Bacteria 1179
186 Ga0373943_0022499 3300035170 Bacteria 2922
187 Ga0373961_0018804 3300035241 Bacteria 1808
188 Ga0373962_0005944 3300035242 Bacteria 2945
189 Ga0373931_0035132 3300035691 Bacteria 2604
190 Ga0373935_0103362 3300035692 Bacteria 1881
191 Ga0373933_0053120 3300035724 Bacteria 2426
192 Ga0373933_0115251 3300035724 Bacteria 1679
193 Ga0373947_0040917 3300035725 Bacteria 2762
194 Ga0373937_0091068 3300036401 Bacteria 2825
195 Ga0373937_0126427 3300036401 Bacteria 2385
196 Ga0373937_0173018 3300036401 Bacteria 2026
197 Ga0373925_0006763 3300037068 Bacteria 8406
198 Ga0373925_0062394 3300037068 Bacteria 2802
199 Ga0436365_1773488 3300039437 Bacteria 2526
200 Ga0451843_0580884 3300041509 Bacteria 1618
201 Ga0451853_2805274 3300041512 Bacteria 3568
202 Ga0495603_0021763 3300046455 Bacteria 3882
203 Ga0495629_0046704 3300046459 Bacteria 3037
204 Ga0495641_0036429 3300046461 Bacteria 2312
205 Ga0495651_0028709 3300046462 Bacteria 4335
206 Ga0495580_0060226 3300046472 Bacteria 2667
207 Ga0495582_0057292 3300046473 Bacteria 2148
208 Ga0495664_0027581 3300046477 Bacteria 3312
209 Ga0495608_0046465 3300046511 Bacteria 2889
210 Ga0495608_0124602 3300046511 Bacteria 1651
211 Ga0495618_0076204 3300046514 Bacteria 2137
212 Ga0495618_0112640 3300046514 Bacteria 1742
213 Ga0495618_0142202 3300046514 Bacteria 1534
214 Ga0495630_0054620 3300046517 Bacteria 2992
215 Ga0495630_0136827 3300046517 Bacteria 1861
216 Ga0495652_0018936 3300046529 Bacteria 6135
217 Ga0495652_0069482 3300046529 Bacteria 2948
218 Ga0495652_0090202 3300046529 Bacteria 2508
219 Ga0495665_0041578 3300046531 Bacteria 2447
220 Ga0495645_0099116 3300046543 Bacteria 2073
221 Ga0495667_0039396 3300046559 Bacteria 3142
222 Ga0495667_0045512 3300046559 Bacteria 2905
223 Ga0495667_0057799 3300046559 Bacteria 2549
224 Ga0495634_0052883 3300046642 Bacteria 2721
225 Ga0495635_0085555 3300046663 Bacteria 2157
226 Ga0495613_0148091 3300046689 Bacteria 1675
227 Ga0495624_0042554 3300046690 Bacteria 2902
228 Ga0495581_0036689 3300047315 Bacteria 2836
229 Ga0495581_0037109 3300047315 Bacteria 2819
230 Ga0495674_0040583 3300047319 Bacteria 4162
231 Ga0495674_0060567 3300047319 Bacteria 3302
232 Ga0495674_0099828 3300047319 Bacteria 2471
233 Ga0495674_0136946 3300047319 Bacteria 2059
234 Ga0495676_0004350 3300047321 Bacteria 12934
235 Ga0495676_0219514 3300047321 Bacteria 1311
236 Ga0495680_0035872 3300047322 Bacteria 3988
237 Ga0495680_0036631 3300047322 Bacteria 3937
238 Ga0495680_0124915 3300047322 Bacteria 1896
239 Ga0495680_0137089 3300047322 Bacteria 1793
240 Ga0495675_0247314 3300047444 Bacteria 1072
241 Ga0495684_0093410 3300047471 Bacteria 2278
242 Ga0495684_0120826 3300047471 Bacteria 1973
243 Ga0495593_0032074 3300047673 Bacteria 2866
244 Ga0495593_0033250 3300047673 Bacteria 2808
245 Ga0495602_0075730 3300048088 Bacteria 2855
246 Ga0495602_0217346 3300048088 Bacteria 1445
247 Ga0495602_0219267 3300048088 Bacteria 1437
248 Ga0496101_0050308 3300048904 Bacteria 2999
249 Ga0496104_0107878 3300048907 Bacteria 2668
250 Ga0496105_0059647 3300048908 Bacteria 3148
251 Ga0496105_0114852 3300048908 Bacteria 2221
252 Ga0496105_0278026 3300048908 Bacteria 1351
253 Ga0496106_0152071 3300048909 Bacteria 1826
254 Ga0496107_0035976 3300048910 Bacteria 3551
255 Ga0496109_0084868 3300048912 Bacteria 2922
256 Ga0496111_0308457 3300048914 Bacteria 1173
257 Ga0496112_0042423 3300048915 Bacteria 4451
258 Ga0496114_0003813 3300048917 Bacteria 11625
259 Ga0496114_0018291 3300048917 Bacteria 5665
260 Ga0496115_0291086 3300048918 Bacteria 1340
261 Ga0496115_0292598 3300048918 Bacteria 1335
262 Ga0501036_0065152 3300049572 Bacteria 3084
263 Ga0501039_0188922 3300049575 Bacteria 1620
264 Ga0501040_0129191 3300049576 Bacteria 1776
265 Ga0501041_0102163 3300049577 Bacteria 1775
266 Ga0501042_0033790 3300049578 Bacteria 3626
267 Ga0501042_0284500 3300049578 Bacteria 1194
268 Ga0501075_0325140 3300049591 Bacteria 1172
269 Ga0501081_0071891 3300049743 Bacteria 2412
270 Ga0501035_0101066 3300049822 Bacteria 2531
271 nmdc:mga05p37_318985_c1 3300050507 Bacteria 1840
272 nmdc:mga05p37_598039_c1 3300050507 Bacteria 1246
273 nmdc:mga08y16_105735_c1 3300050511 Bacteria 2930
274 nmdc:mga0n895_107095_c1 3300050512 Bacteria 2809
275 nmdc:mga0n895_63199_c1 3300050512 Bacteria 3661
276 nmdc:mga0rr50_41401_c1 3300050513 Bacteria 3357
277 nmdc:mga0rr50_58852_c1 3300050513 Bacteria 2882
278 nmdc:mga08x19_136797_c1 3300050514 Bacteria 1652
279 nmdc:mga08x19_39470_c1 3300050514 Bacteria 3001
280 nmdc:mga08x19_95887_c1 3300050514 Bacteria 1963
281 nmdc:mga0a205_152582_c1 3300050515 Bacteria 2209
282 Ga0495612_0054930 3300053078 Bacteria 1641
283 Ga0495619_0074310 3300053085 Bacteria 2279
284 Ga0501082_0323038 3300060353 Bacteria 1345
285 Ga0530510_0111950 3300061734 Bacteria 2000
286 2644609705 2643221711 Bacteria 4865335
287 2644609819 2643221711 Bacteria 4865335
288 2819424360 2818991318 Bacteria 5266538
289 2891555099 2891554331 Bacteria 8812224
290 Ga0105243_10278158
291 JGI24744J21845_10006909
292 Ga0070658_10127856
293 Ga0070683_100079246
294 Ga0068869_100049712
295 Ga0068868_100067103
296 Ga0068868_100344776
297 Ga0070691_10035787
298 Ga0070661_100050255
299 Ga0070692_10019342
300 Ga0070675_100001863
301 Ga0070674_100024560
302 Ga0070659_100126954
303 Ga0070659_100223718
304 Ga0070709_10002509
305 Ga0070709_10072484
306 Ga0070709_10313906
307 Ga0070714_100009466
308 Ga0070714_100019589
309 Ga0070714_100057546
310 Ga0070714_100064051
311 Ga0070714_100108036
312 Ga0070714_100150880
313 Ga0070714_100178622
314 Ga0070714_100694534
315 Ga0070713_100087648
316 Ga0070713_100102171
317 Ga0070713_100103598
318 Ga0070713_100164950
319 Ga0070713_100270248
320 Ga0070713_100506616
321 Ga0070710_10032627
322 Ga0070710_10045004
323 Ga0070711_100004084
324 Ga0070711_100102106
325 Ga0070711_100144341
326 Ga0070700_100034503
327 Ga0070700_100064911
328 Ga0070708_100020721
329 Ga0070708_100044160
330 Ga0070708_100074502
331 Ga0070708_100112161
332 Ga0070708_100138795
333 Ga0070708_100254208
334 Ga0070663_100073608
335 Ga0070662_100069453
336 Ga0070706_100079667
337 Ga0070706_100080558
338 Ga0070707_100060595
339 Ga0070707_100136637
340 Ga0070699_100069989
341 Ga0070699_100161218
342 Ga0070679_100156592
343 Ga0070684_100084376
344 Ga0070697_100016470
345 Ga0070697_100130395
346 Ga0070697_100186326
347 Ga0070672_100133043
348 Ga0070672_100302520
349 Ga0070664_100042701
350 Ga0070664_100081706
351 Ga0068857_100027150
352 Ga0068856_100110107
353 Ga0068861_100036299
354 Ga0068870_10124882
355 Ga0068862_100022375
356 Ga0070717_10020126
357 Ga0070717_10052815
358 Ga0070717_10055331
359 Ga0070717_10105499
360 Ga0070717_10138391
361 Ga0070717_10319795
362 Ga0070715_10018071
363 Ga0070716_100016914
364 Ga0070716_100027812
365 Ga0070716_100089501
366 Ga0070716_100099914
367 Ga0070712_100057059
368 Ga0070712_100087277
369 Ga0070712_100097365
370 Ga0070712_100099296
371 Ga0075428_100325182
372 Ga0075428_100390822
373 Ga0075433_10154450
374 Ga0075434_100105342
375 Ga0075434_100133758
376 Ga0068865_100040766
377 Ga0075436_100053988
378 Ga0075436_100098713
379 Ga0075436_100305413
380 Ga0075435_100013916
381 Ga0075435_100036778
382 Ga0111539_10142936
383 Ga0105245_10083761
384 Ga0114129_10208505
385 Ga0114129_10351700
386 Ga0105243_10053120
387 Ga0105248_10683477
388 Ga0105239_10656238
389 Ga0157372_10228013
390 Ga0157372_10680887
391 Ga0157375_10012626
392 Ga0157380_10224816
393 Ga0157380_10361085
394 Ga0157377_10117491
395 Ga0157376_10354915
396 Ga0213876_10023382
397 Ga0207692_10040090
398 Ga0207692_10040539
399 Ga0207692_10041621
400 Ga0207685_10016176
401 Ga0207685_10017880
402 Ga0207685_10046776
403 Ga0207699_10074253
404 Ga0207699_10168828
405 Ga0207699_10243598
406 Ga0207645_10019844
407 Ga0207643_10137961
408 Ga0207684_10039116
409 Ga0207684_10071016
410 Ga0207684_10292166
411 Ga0207693_10068959
412 Ga0207693_10076868
413 Ga0207693_10101143
414 Ga0207693_10122581
415 Ga0207663_10001083
416 Ga0207663_10079700
417 Ga0207663_10158881
418 Ga0207649_10043216
419 Ga0207649_10063071
420 Ga0207652_10121667
421 Ga0207646_10020921
422 Ga0207646_10117610
423 Ga0207659_10055033
424 Ga0207687_10054715
425 Ga0207700_10053182
426 Ga0207700_10055831
427 Ga0207700_10077570
428 Ga0207700_10077655
429 Ga0207700_10296351
430 Ga0207700_10438255
431 Ga0207664_10015113
432 Ga0207664_10067647
433 Ga0207664_10078205
434 Ga0207664_10088227
435 Ga0207664_10097931
436 Ga0207664_10112997
437 Ga0207664_10305124
438 Ga0207664_10413670
439 Ga0207690_10161706
440 Ga0207706_10031190
441 Ga0207669_10042281
442 Ga0207704_10032810
443 Ga0207665_10021391
444 Ga0207665_10054557
445 Ga0207665_10065130
446 Ga0207691_10143134
447 Ga0207691_10382160
448 Ga0207711_10072955
449 Ga0207689_10056671
450 Ga0207661_10075030
451 Ga0207679_10059223
452 Ga0207679_10071193
453 Ga0207668_10096551
454 Ga0207677_10034556
455 Ga0207678_10080019
456 Ga0207708_10018109
457 Ga0207708_10022295
458 Ga0207674_10027517
459 Ga0207675_100286520
460 Ga0207428_10069739
461 Ga0307513_10034468
462 Ga0307516_10074502
463 Ga0307413_10044460
464 Ga0307410_10034046
465 Ga0307410_10066465
466 Ga0307407_10042354
467 Ga0307409_100067460
468 Ga0307415_100077204
469 Ga0373949_0009596
470 Ga0373952_0002672
471 Ga0373941_0052838
472 Ga0373945_0030240
473 Ga0373957_0066093
474 Ga0373957_0096597
475 Ga0373943_0022499
476 Ga0373961_0018804
477 Ga0373962_0005944
478 Ga0373931_0035132
479 Ga0373935_0103362
480 Ga0373933_0053120
481 Ga0373933_0115251
482 Ga0373947_0040917
483 Ga0373937_0091068
484 Ga0373937_0126427
485 Ga0373937_0173018
486 Ga0373925_0006763
487 Ga0373925_0062394
488 Ga0436365_1773488
489 Ga0451843_0580884
490 Ga0451853_2805274
491 Ga0495603_0021763
492 Ga0495629_0046704
493 Ga0495641_0036429
494 Ga0495651_0028709
495 Ga0495580_0060226
496 Ga0495582_0057292
497 Ga0495664_0027581
498 Ga0495608_0046465
499 Ga0495608_0124602
500 Ga0495618_0076204
501 Ga0495618_0112640
502 Ga0495618_0142202
503 Ga0495630_0054620
504 Ga0495630_0136827
505 Ga0495652_0018936
506 Ga0495652_0069482
507 Ga0495652_0090202
508 Ga0495665_0041578
509 Ga0495645_0099116
510 Ga0495667_0039396
511 Ga0495667_0045512
512 Ga0495667_0057799
513 Ga0495634_0052883
514 Ga0495635_0085555
515 Ga0495613_0148091
516 Ga0495624_0042554
517 Ga0495581_0036689
518 Ga0495581_0037109
519 Ga0495674_0040583
520 Ga0495674_0060567
521 Ga0495674_0099828
522 Ga0495674_0136946
523 Ga0495676_0004350
524 Ga0495676_0219514
525 Ga0495680_0035872
526 Ga0495680_0036631
527 Ga0495680_0124915
528 Ga0495680_0137089
529 Ga0495675_0247314
530 Ga0495684_0093410
531 Ga0495684_0120826
532 Ga0495593_0032074
533 Ga0495593_0033250
534 Ga0495602_0075730
535 Ga0495602_0217346
536 Ga0495602_0219267
537 Ga0496101_0050308
538 Ga0496104_0107878
539 Ga0496105_0059647
540 Ga0496105_0114852
541 Ga0496105_0278026
542 Ga0496106_0152071
543 Ga0496107_0035976
544 Ga0496109_0084868
545 Ga0496111_0308457
546 Ga0496112_0042423
547 Ga0496114_0003813
548 Ga0496114_0018291
549 Ga0496115_0291086
550 Ga0496115_0292598
551 Ga0501036_0065152
552 Ga0501039_0188922
553 Ga0501040_0129191
554 Ga0501041_0102163
555 Ga0501042_0033790
556 Ga0501042_0284500
557 Ga0501075_0325140
558 Ga0501081_0071891
559 Ga0501035_0101066
560 nmdc:mga05p37_318985_c1
561 nmdc:mga05p37_598039_c1
562 nmdc:mga08y16_105735_c1
563 nmdc:mga0n895_107095_c1
564 nmdc:mga0n895_63199_c1
565 nmdc:mga0rr50_41401_c1
566 nmdc:mga0rr50_58852_c1
567 nmdc:mga08x19_136797_c1
568 nmdc:mga08x19_39470_c1
569 nmdc:mga08x19_95887_c1
570 nmdc:mga0a205_152582_c1
571 Ga0495612_0054930
572 Ga0495619_0074310
573 Ga0501082_0323038
574 Ga0530510_0111950
575 2644609705
576 2644609819
577 2819424360
578 2891555099

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00589

Phage_integrase

Phage integrase family

180

349

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nrw-assembly1.cif.gz_A crystal structure of the n-terminal domain of phage integrase/site-specific recombinase (tnp) from haloarcula marismortui, northeast structural genomics consortium target hmr208a 0.8493 26 123
2kob-assembly1.cif.gz_A solution nmr structure of clolep_01837 (fragment 61-160) from clostridium leptum. northeast structural genomics consortium target qlr8a 0.8367 26 127
2kkp-assembly1.cif.gz_A solution nmr structure of the phage integrase sam-like domain from moth 1796 from moorella thermoacetica. northeast structural genomics consortium target mtr39k (residues 64-171). 0.8293 60 135
2oxo-assembly1.cif.gz_A crystallization and structure determination of the core-binding domain of bacteriophage lambda integrase 0.7999 26 129
2oxo-assembly1.cif.gz_A crystallization and structure determination of the core-binding domain of bacteriophage lambda integrase 0.7542 26 129
ID Description Score Start End Superfamily
4a8eA02 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8872 149 296 1.10.443.10
af_P0A8P6_5_99_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.8635 24 127 1.10.150.130
af_P32053_96_209_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.8465 26 127 1.10.150.130
af_P76168_47_165_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.8418 26 127 1.10.150.130
3nrwA00 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.8401 26 123 1.10.150.130
ID Description Score Start End GO Terms
AF-T1BEG8-F1-model_v4 Phage integrase family protein 0.9638 148 265 GO:0003677
GO:0006310
GO:0015074
AF-A0A7K0A8B5-F1-model_v4 Tyrosine-type recombinase/integrase 0.9537 159 270 GO:0003677
GO:0006310
GO:0015074
AF-T1BEG8-F1-model_v4 Phage integrase family protein 0.9403 148 265 GO:0003677
GO:0006310
GO:0015074
AF-A0A7K0A8B5-F1-model_v4 Tyrosine-type recombinase/integrase 0.9367 159 270 GO:0003677
GO:0006310
GO:0015074
AF-X7V3E7-F1-model_v4 deleted 0.9207 148 290

Map