F387156

General Info

Members Datasets Scaffolds Average Seq Length
285 177 250 477

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2897561785|2897562164
Length 545
Sequence GLLFEGFAGALTPINLLWVVIGAVLGTAVGVLPGLGSSMAVALLLPITFSLDPTAAFIMFAGIYFGGMFGDSTAAILLNTPGNSTAIATSFEGHRMARNGKAGKALATAAIGAFIGGLLATMLTVVAMPMLTALATLFGPAEYFALAVFAFLAISSVVSESIVRGLAALGIGLALTFIGIDGPSGTERYTFGLPQLFDGLSIVVITVGLLALGEVFAVAARIRGTNGAEKLLPRQRVWLSGRELRQALPALFRGTGFGVPFGIIPAGGAEVPTFLAYGTEKRLARRRGDTEFGTTGSLRGVAGPEAAGNATAGTAMGALLALGLPTSATAAIMIAAFQQYGLQPGPLLFERNADLVWTLLASLFIGLVVLLGINLGLAGLWVRLLRVPKPYLYAGIAVLSVLGVYAMGSSVVDVVVLLGIGLLGFLMRRARVPLAPVMIAVVLGPLAETELRRALAVSEGDAASLVSSPFTITLYSVLAVALVVSLVQHVRKRSVSARASTGSLGVQESGAGGANTGSAGVSAPSGTGTSDTGRGADPKGPPPRG

Samples

Sample ID Description Type Environment
1 2582580736 Prauserella sp. Am3 Isolate Unclassified
2 2643221553 Microbacterium sp. Root553 Isolate Unclassified
3 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
4 2773857759 Microbacterium sp. 1294 Isolate Unclassified
5 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
6 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
7 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
8 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
9 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
10 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
11 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
12 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
13 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
14 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
15 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
16 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
17 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
18 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
19 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
20 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
21 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
22 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
23 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
24 2920879853 Kocuria salina CV6 Isolate Unclassified
25 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
26 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
27 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
28 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
29 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
30 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
31 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
32 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
34 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
35 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
36 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
37 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
38 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
39 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
40 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
41 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
42 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
43 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
44 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
45 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
46 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
47 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
48 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
49 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
50 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
51 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
52 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
53 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
54 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
55 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
56 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
57 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
58 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
59 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
60 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
61 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
62 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
63 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
64 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
65 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
66 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
67 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
68 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
69 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
70 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
71 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
72 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
73 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
74 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
75 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
76 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
77 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
78 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
79 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
80 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
81 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
82 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
83 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
84 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
85 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
86 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
87 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
88 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
89 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
90 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
91 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
92 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
125 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
126 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
127 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
128 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
129 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
130 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
131 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
132 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
133 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
134 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
135 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
136 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
137 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
138 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
139 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
140 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
144 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
145 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
173 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
174 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
175 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
176 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
177 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.72
Metatranscriptomes 0
Isolates 12.28

Biome Distribution

Category Percentage (%)
Aerial Root 0.35
Bulb 0
Endosphere 0.7
Nodule 0
Rhizoplane 0
Rhizosphere 87.02
Stem 0
Stem Tuber 0
Unclassified 11.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000839 3300003203 Bacteria 14447
2 JGI25406J46586_10008494 3300003203 Bacteria 4646
3 rootH2_10076913 3300003320 Bacteria 4176
4 Ga0065714_10012234 3300005288 Bacteria 2444
5 Ga0065712_10013439 3300005290 Bacteria 2644
6 Ga0065715_10161674 3300005293 Bacteria 1623
7 Ga0070690_100016088 3300005330 Bacteria 4473
8 Ga0070670_100002768 3300005331 Bacteria 14488
9 Ga0070677_10004906 3300005333 Bacteria 4391
10 Ga0068869_100004957 3300005334 Bacteria 8330
11 Ga0068869_100011180 3300005334 Bacteria 5882
12 Ga0068869_100028604 3300005334 Bacteria 3897
13 Ga0070666_10016186 3300005335 Bacteria 4768
14 Ga0070666_10057436 3300005335 Bacteria 2629
15 Ga0070668_100018390 3300005347 Bacteria 5246
16 Ga0070669_100008251 3300005353 Bacteria 7437
17 Ga0070669_100014653 3300005353 Bacteria 5581
18 Ga0070669_100043731 3300005353 Bacteria 3263
19 Ga0070669_100114200 3300005353 Bacteria 2053
20 Ga0070675_100012849 3300005354 Bacteria 6571
21 Ga0070675_100094964 3300005354 Bacteria 2503
22 Ga0070671_100014368 3300005355 Bacteria 6396
23 Ga0070671_100021400 3300005355 Bacteria 5281
24 Ga0070673_100005544 3300005364 Bacteria 8091
25 Ga0070673_100084785 3300005364 Bacteria 2578
26 Ga0070659_100016507 3300005366 Bacteria 5544
27 Ga0070667_100162459 3300005367 Bacteria 1968
28 Ga0070667_100166267 3300005367 Bacteria 1946
29 Ga0070667_100166802 3300005367 Bacteria 1942
30 Ga0070710_10049325 3300005437 Bacteria 2355
31 Ga0070701_10014111 3300005438 Bacteria 3655
32 Ga0070701_10020097 3300005438 Bacteria 3166
33 Ga0070705_100009060 3300005440 Bacteria 4941
34 Ga0070700_100010419 3300005441 Bacteria 5133
35 Ga0070700_100012316 3300005441 Bacteria 4767
36 Ga0070663_100039997 3300005455 Bacteria 3280
37 Ga0070663_100109196 3300005455 Bacteria 2076
38 Ga0070678_100083414 3300005456 Bacteria 2429
39 Ga0068867_100012033 3300005459 Bacteria 6110
40 Ga0070685_10003653 3300005466 Bacteria 7804
41 Ga0070672_100034450 3300005543 Bacteria 3842
42 Ga0070672_100036223 3300005543 Bacteria 3758
43 Ga0070686_100026408 3300005544 Bacteria 3506
44 Ga0070686_100029107 3300005544 Bacteria 3356
45 Ga0070695_100004118 3300005545 Bacteria 8496
46 Ga0070704_100093450 3300005549 Bacteria 2248
47 Ga0070664_100017424 3300005564 Bacteria 5898
48 Ga0070702_100062643 3300005615 Bacteria 2169
49 Ga0070702_100125155 3300005615 Bacteria 1615
50 Ga0068859_100113573 3300005617 Bacteria 2772
51 Ga0068861_100000304 3300005719 Bacteria 27558
52 Ga0068861_100011152 3300005719 Bacteria 6240
53 Ga0068851_10025074 3300005834 Bacteria 2923
54 Ga0068870_10005280 3300005840 Bacteria 5627
55 Ga0068870_10028416 3300005840 Bacteria 2809
56 Ga0068863_100059135 3300005841 Bacteria 3627
57 Ga0068863_100152263 3300005841 Bacteria 2213
58 Ga0068858_100012391 3300005842 Bacteria 8040
59 Ga0068858_100042591 3300005842 Bacteria 4209
60 Ga0068860_100037665 3300005843 Bacteria 4629
61 Ga0068860_100160445 3300005843 Bacteria 2168
62 Ga0068862_100003413 3300005844 Bacteria 13698
63 Ga0068862_100033590 3300005844 Bacteria 4338
64 Ga0068862_100051878 3300005844 Bacteria 3509
65 Ga0081539_10000561 3300005985 Bacteria 76621
66 Ga0081539_10006449 3300005985 Bacteria 11248
67 Ga0075364_10037330 3300006051 Bacteria 3145
68 Ga0075432_10015289 3300006058 Bacteria 2616
69 Ga0075428_100017045 3300006844 Bacteria 8027
70 Ga0075428_100062768 3300006844 Bacteria 4067
71 Ga0075430_100007357 3300006846 Bacteria 9301
72 Ga0075430_100008568 3300006846 Bacteria 8627
73 Ga0075430_100023727 3300006846 Bacteria 5224
74 Ga0075431_100053092 3300006847 Bacteria 4179
75 Ga0075433_10005182 3300006852 Bacteria 10210
76 Ga0075434_100006370 3300006871 Bacteria 10817
77 Ga0075434_100021481 3300006871 Bacteria 6273
78 Ga0075434_100022973 3300006871 Bacteria 6071
79 Ga0097620_100113569 3300006931 Bacteria 2772
80 Ga0075435_100014641 3300007076 Bacteria 5874
81 Ga0075435_100051354 3300007076 Bacteria 3321
82 Ga0111539_10001895 3300009094 Bacteria 27840
83 Ga0111539_10005583 3300009094 Bacteria 16267
84 Ga0111539_10022889 3300009094 Bacteria 7672
85 Ga0111539_10045948 3300009094 Bacteria 5226
86 Ga0114129_10010593 3300009147 Bacteria 13146
87 Ga0114129_10109281 3300009147 Bacteria 3817
88 Ga0105242_10036970 3300009176 Bacteria 3920
89 Ga0105242_10063500 3300009176 Bacteria 3041
90 Ga0105249_10048266 3300009553 Bacteria 3881
91 Ga0105246_10063170 3300011119 Bacteria 2582
92 Ga0157375_10045977 3300013308 Bacteria 4252
93 Ga0157375_10213158 3300013308 Bacteria 2089
94 Ga0163163_10052087 3300014325 Bacteria 4037
95 Ga0163163_10075642 3300014325 Bacteria 3361
96 Ga0157380_10008438 3300014326 Bacteria 7356
97 Ga0157380_10018603 3300014326 Bacteria 5160
98 Ga0157380_10027151 3300014326 Bacteria 4352
99 Ga0157380_10065520 3300014326 Bacteria 2920
100 Ga0157380_10068861 3300014326 Bacteria 2854
101 Ga0157377_10066399 3300014745 Bacteria 2074
102 Ga0157379_10048229 3300014968 Bacteria 3801
103 Ga0157376_10054102 3300014969 Bacteria 3345
104 Ga0207697_10031069 3300025315 Bacteria 2185
105 Ga0207656_10003564 3300025321 Bacteria 5366
106 Ga0207682_10001725 3300025893 Bacteria 10019
107 Ga0207682_10007660 3300025893 Bacteria 4297
108 Ga0207682_10022140 3300025893 Bacteria 2503
109 Ga0207688_10004412 3300025901 Bacteria 7656
110 Ga0207688_10008615 3300025901 Bacteria 5555
111 Ga0207645_10010048 3300025907 Bacteria 6516
112 Ga0207645_10017082 3300025907 Bacteria 4794
113 Ga0207643_10002380 3300025908 Bacteria 10215
114 Ga0207662_10014183 3300025918 Bacteria 4466
115 Ga0207662_10020288 3300025918 Bacteria 3791
116 Ga0207681_10008310 3300025923 Bacteria 6348
117 Ga0207681_10011524 3300025923 Bacteria 5431
118 Ga0207659_10000557 3300025926 Bacteria 22369
119 Ga0207659_10014300 3300025926 Bacteria 5113
120 Ga0207659_10036228 3300025926 Bacteria 3416
121 Ga0207659_10045887 3300025926 Bacteria 3083
122 Ga0207659_10072349 3300025926 Bacteria 2520
123 Ga0207659_10139615 3300025926 Bacteria 1880
124 Ga0207644_10007165 3300025931 Bacteria 7264
125 Ga0207690_10016338 3300025932 Bacteria 4512
126 Ga0207706_10017346 3300025933 Bacteria 6486
127 Ga0207706_10058882 3300025933 Bacteria 3383
128 Ga0207686_10013484 3300025934 Bacteria 4524
129 Ga0207686_10035371 3300025934 Bacteria 2998
130 Ga0207709_10039110 3300025935 Bacteria 2831
131 Ga0207669_10065990 3300025937 Bacteria 2248
132 Ga0207704_10036341 3300025938 Bacteria 2833
133 Ga0207704_10047787 3300025938 Bacteria 2561
134 Ga0207691_10010692 3300025940 Bacteria 8809
135 Ga0207691_10016395 3300025940 Bacteria 7034
136 Ga0207691_10021795 3300025940 Bacteria 6048
137 Ga0207691_10097080 3300025940 Bacteria 2634
138 Ga0207691_10141058 3300025940 Bacteria 2124
139 Ga0207689_10003005 3300025942 Bacteria 15556
140 Ga0207689_10044778 3300025942 Bacteria 3659
141 Ga0207689_10131647 3300025942 Bacteria 2058
142 Ga0207679_10014808 3300025945 Bacteria 5137
143 Ga0207651_10005070 3300025960 Bacteria 6719
144 Ga0207651_10005509 3300025960 Bacteria 6510
145 Ga0207651_10039751 3300025960 Bacteria 3105
146 Ga0207668_10088080 3300025972 Bacteria 2273
147 Ga0207668_10152765 3300025972 Bacteria 1789
148 Ga0207703_10008351 3300026035 Bacteria 8185
149 Ga0207678_10059610 3300026067 Bacteria 3284
150 Ga0207678_10075767 3300026067 Bacteria 2882
151 Ga0207708_10002053 3300026075 Bacteria 14830
152 Ga0207708_10014150 3300026075 Bacteria 5965
153 Ga0207708_10015659 3300026075 Bacteria 5689
154 Ga0207641_10032491 3300026088 Bacteria 4332
155 Ga0207641_10107937 3300026088 Bacteria 2463
156 Ga0207648_10001228 3300026089 Bacteria 28750
157 Ga0207648_10014441 3300026089 Bacteria 7300
158 Ga0207648_10062188 3300026089 Bacteria 3255
159 Ga0207648_10144905 3300026089 Bacteria 2095
160 Ga0207674_10061161 3300026116 Bacteria 3806
161 Ga0207674_10077391 3300026116 Bacteria 3332
162 Ga0207675_100002528 3300026118 Bacteria 18077
163 Ga0207675_100007350 3300026118 Bacteria 10406
164 Ga0207675_100082570 3300026118 Bacteria 3014
165 Ga0207675_100135983 3300026118 Bacteria 2332
166 Ga0207683_10052137 3300026121 Bacteria 3584
167 Ga0207428_10016869 3300027907 Bacteria 6275
168 Ga0207428_10024919 3300027907 Bacteria 5016
169 Ga0207428_10046171 3300027907 Bacteria 3504
170 Ga0207428_10078395 3300027907 Bacteria 2585
171 Ga0207428_10087907 3300027907 Bacteria 2417
172 Ga0268265_10058680 3300028380 Bacteria 2939
173 Ga0268265_10059442 3300028380 Bacteria 2924
174 Ga0268265_10096094 3300028380 Bacteria 2380
175 Ga0268264_10097922 3300028381 Bacteria 2543
176 Ga0268264_10113826 3300028381 Bacteria 2374
177 Ga0307408_100033461 3300031548 Bacteria 3591
178 Ga0307408_100108009 3300031548 Bacteria 2132
179 Ga0307410_10143497 3300031852 Bacteria 1769
180 Ga0307410_10168928 3300031852 Bacteria 1646
181 Ga0307406_10000031 3300031901 Bacteria 87391
182 Ga0307412_10038044 3300031911 Bacteria 3095
183 Ga0307412_10073761 3300031911 Bacteria 2336
184 Ga0307411_10073999 3300032005 Bacteria 2320
185 Ga0439466_0008228 3300041411 Bacteria 3933
186 Ga0439465_0009893 3300041413 Bacteria 3003
187 Ga0439433_0000694 3300041999 Bacteria 6529
188 Ga0439442_000259 3300042002 Bacteria 12917
189 Ga0439432_020697 3300042006 Bacteria 2184
190 Ga0439449_0000538 3300042007 Bacteria 14157
191 Ga0439452_019686 3300042010 Bacteria 1781
192 Ga0439435_0020406 3300042436 Bacteria 1709
193 Ga0450918_000599 3300042531 Bacteria 7726
194 Ga0466970_0000137 3300044765 Bacteria 33747
195 Ga0495658_0011849 3300046683 Bacteria 4398
196 Ga0496116_0015543 3300048919 Bacteria 6012
197 Ga0496117_0006456 3300048920 Bacteria 11856
198 Ga0496117_0029277 3300048920 Bacteria 4248
199 Ga0496118_0004451 3300048921 Bacteria 16613
200 Ga0496118_0014473 3300048921 Bacteria 7383
201 Ga0496120_0000326 3300048923 Bacteria 79061
202 Ga0496122_0000443 3300048925 Bacteria 86652
203 Ga0496122_0002971 3300048925 Bacteria 23104
204 Ga0496123_0000003 3300048926 Bacteria 866556
205 Ga0496124_0006476 3300048927 Bacteria 12743
206 Ga0496124_0013601 3300048927 Bacteria 7935
207 Ga0496124_0121923 3300048927 Bacteria 2082
208 Ga0496125_0000077 3300048928 Bacteria 232629
209 Ga0496125_0005211 3300048928 Bacteria 14588
210 Ga0496126_0028672 3300048929 Bacteria 5301
211 Ga0501034_0000070 3300049571 Bacteria 180933
212 Ga0501036_0029258 3300049572 Bacteria 4656
213 Ga0501037_0167145 3300049573 Unclassified 1565
214 Ga0501039_0023928 3300049575 Bacteria 4689
215 Ga0501040_0094509 3300049576 Bacteria 2080
216 Ga0501041_0015650 3300049577 Bacteria 4506
217 Ga0501046_0082220 3300049580 Bacteria 2488
218 Ga0501046_0093417 3300049580 Bacteria 2312
219 Ga0501048_0023310 3300049582 Bacteria 4526
220 Ga0501048_0099636 3300049582 Bacteria 2050
221 Ga0501071_0058981 3300049587 Bacteria 2776
222 Ga0501075_0090886 3300049591 Bacteria 2316
223 Ga0501076_0030958 3300049592 Bacteria 4170
224 Ga0501076_0051760 3300049592 Bacteria 3251
225 Ga0501077_0062357 3300049593 Bacteria 2366
226 Ga0501079_0043870 3300049741 Bacteria 3452
227 Ga0501080_0129145 3300049742 Bacteria 2340
228 Ga0501081_0098261 3300049743 Bacteria 2067
229 Ga0501045_0055306 3300049824 Bacteria 2902
230 nmdc:mga00v17_7972_c1 3300050491 Bacteria 5678
231 nmdc:mga0qj67_201445_c1 3300050509 Bacteria 1617
232 nmdc:mga0qj67_44540_c1 3300050509 Bacteria 3498
233 nmdc:mga06r32_113505_c1 3300050510 Bacteria 2667
234 nmdc:mga06r32_118137_c1 3300050510 Bacteria 2614
235 nmdc:mga08y16_39100_c1 3300050511 Bacteria 4978
236 nmdc:mga08y16_67632_c1 3300050511 Bacteria 3727
237 nmdc:mga08y16_7714_c1 3300050511 Bacteria 11270
238 nmdc:mga0n895_27201_c1 3300050512 Bacteria 5430
239 nmdc:mga0n895_3782_c1 3300050512 Bacteria 12255
240 nmdc:mga0n895_9497_c1 3300050512 Bacteria 8513
241 nmdc:mga0rr50_11691_c1 3300050513 Bacteria 5635
242 nmdc:mga0rr50_46262_c1 3300050513 Bacteria 3203
243 nmdc:mga0a205_22308_c1 3300050515 Bacteria 5995
244 nmdc:mga0a205_2635_c1 3300050515 Bacteria 15848
245 nmdc:mga0a205_33952_c1 3300050515 Bacteria 4893
246 nmdc:mga0a205_906_c2 3300050515 Bacteria 21167
247 Ga0590071_000009 3300059421 Bacteria 52100
248 Ga0590074_000680 3300059423 Bacteria 5166
249 Ga0590075_000141 3300059424 Bacteria 19058
250 Ga0590077_001266 3300059426 Bacteria 6049

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049591 Ga0501075_0090886 Ga0501075_0090886_44_1246 385
2 3300050509 nmdc:mga0qj67_201445_c1 nmdc:mga0qj67_201445_c1_324_1565 386
3 3300006846 Ga0075430_100008568 Ga0075430_1000085684 416
4 3300009147 Ga0114129_10010593 Ga0114129_100105937 416
5 3300005347 Ga0070668_100018390 Ga0070668_1000183902 434
6 3300006847 Ga0075431_100053092 Ga0075431_1000530923 434
7 3300025940 Ga0207691_10141058 Ga0207691_101410582 434
8 3300049571 Ga0501034_0000070 Ga0501034_0000070_156702_158228 434
9 3300050510 nmdc:mga06r32_113505_c1 nmdc:mga06r32_113505_c1_1039_2535 434
10 3300031901 Ga0307406_10000031 Ga0307406_1000003140 435
11 3300048927 Ga0496124_0121923 Ga0496124_0121923_65_1594 435
12 3300003320 rootH2_10076913 rootH2_100769134 436
13 3300006058 Ga0075432_10015289 Ga0075432_100152892 436
14 3300009094 Ga0111539_10001895 Ga0111539_1000189513 436
15 3300027907 Ga0207428_10046171 Ga0207428_100461712 436
16 3300049573 Ga0501037_0167145 Ga0501037_0167145_36_1406 437
17 3300049582 Ga0501048_0099636 Ga0501048_0099636_13_1380 437
18 3300049741 Ga0501079_0043870 Ga0501079_0043870_50_1408 437
19 3300031911 Ga0307412_10073761 Ga0307412_100737611 439
20 3300041411 Ga0439466_0008228 Ga0439466_0008228_572_2068 439
21 3300059421 Ga0590071_000009 Ga0590071_000009_35387_36862 441
22 3300059423 Ga0590074_000680 Ga0590074_000680_1383_2858 441
23 3300059424 Ga0590075_000141 Ga0590075_000141_3212_4687 441
24 3300059426 Ga0590077_001266 Ga0590077_001266_1472_2947 441
25 3300005354 Ga0070675_100012849 Ga0070675_1000128493 442
26 3300005844 Ga0068862_100051878 Ga0068862_1000518783 442
27 3300025926 Ga0207659_10045887 Ga0207659_100458872 442
28 3300028380 Ga0268265_10096094 Ga0268265_100960942 442
29 3300048927 Ga0496124_0013601 Ga0496124_0013601_1241_2758 443
30 3300005288 Ga0065714_10012234 Ga0065714_100122342 445
31 3300006051 Ga0075364_10037330 Ga0075364_100373301 446
32 3300014969 Ga0157376_10054102 Ga0157376_100541022 446
33 3300048919 Ga0496116_0015543 Ga0496116_0015543_541_2082 446
34 3300048920 Ga0496117_0029277 Ga0496117_0029277_1836_3377 446
35 3300048921 Ga0496118_0004451 Ga0496118_0004451_7764_9305 446
36 3300048923 Ga0496120_0000326 Ga0496120_0000326_15926_17467 446
37 3300048925 Ga0496122_0000443 Ga0496122_0000443_44875_46416 446
38 3300048926 Ga0496123_0000003 Ga0496123_0000003_173557_175098 446
39 3300048927 Ga0496124_0006476 Ga0496124_0006476_2969_4510 446
40 3300048928 Ga0496125_0005211 Ga0496125_0005211_4021_5562 446
41 3300048929 Ga0496126_0028672 Ga0496126_0028672_2718_4259 446
42 3300050491 nmdc:mga00v17_7972_c1 nmdc:mga00v17_7972_c1_132_1667 446
43 iso_pu_bacteria 2984580707 2984581841 446
44 3300025960 Ga0207651_10039751 Ga0207651_100397512 447
45 3300006846 Ga0075430_100007357 Ga0075430_1000073575 449
46 3300009094 Ga0111539_10005583 Ga0111539_100055835 449
47 3300027907 Ga0207428_10024919 Ga0207428_100249193 449
48 3300050509 nmdc:mga0qj67_44540_c1 nmdc:mga0qj67_44540_c1_302_1699 449
49 3300050511 nmdc:mga08y16_7714_c1 nmdc:mga08y16_7714_c1_8772_10169 449
50 3300009094 Ga0111539_10045948 Ga0111539_100459483 450
51 3300005364 Ga0070673_100084785 Ga0070673_1000847852 451
52 3300027907 Ga0207428_10078395 Ga0207428_100783952 451
53 3300050511 nmdc:mga08y16_39100_c1 nmdc:mga08y16_39100_c1_1069_2568 451
54 3300025926 Ga0207659_10036228 Ga0207659_100362282 452
55 3300044765 Ga0466970_0000137 Ga0466970_0000137_10319_11929 454
56 iso_pu_bacteria 2857632687 2857633421 454
57 iso_pu_bacteria 2870801768 2870803733 454
58 iso_pu_bacteria 2870804320 2870805686 454
59 iso_pu_bacteria 2893684298 2893686250 454
60 iso_pu_bacteria 2920879853 2920880487 454
61 iso_pu_bacteria 2953998280 2953998655 454
62 iso_pu_bacteria 8054107350 8054109399 454
63 3300006844 Ga0075428_100062768 Ga0075428_1000627683 455
64 3300006846 Ga0075430_100023727 Ga0075430_1000237276 455
65 3300025926 Ga0207659_10000557 Ga0207659_1000055715 455
66 3300031548 Ga0307408_100033461 Ga0307408_1000334613 455
67 3300031852 Ga0307410_10143497 Ga0307410_101434972 455
68 3300042002 Ga0439442_000259 Ga0439442_000259_6215_7723 455
69 3300042010 Ga0439452_019686 Ga0439452_019686_69_1577 455
70 3300042531 Ga0450918_000599 Ga0450918_000599_137_1645 455
71 3300048920 Ga0496117_0006456 Ga0496117_0006456_10074_11591 455
72 3300048925 Ga0496122_0002971 Ga0496122_0002971_6810_8327 455
73 3300050510 nmdc:mga06r32_118137_c1 nmdc:mga06r32_118137_c1_1019_2533 455
74 iso_pu_bacteria 2582580736 2583148641 455
75 iso_pu_bacteria 2842888712 2842891769 455
76 iso_pu_bacteria 2848551377 2848553109 455
77 3300005834 Ga0068851_10025074 Ga0068851_100250742 456
78 3300025321 Ga0207656_10003564 Ga0207656_100035642 456
79 3300005290 Ga0065712_10013439 Ga0065712_100134392 457
80 3300005293 Ga0065715_10161674 Ga0065715_101616741 457
81 3300005334 Ga0068869_100004957 Ga0068869_1000049575 457
82 3300005335 Ga0070666_10016186 Ga0070666_100161862 457
83 3300005353 Ga0070669_100043731 Ga0070669_1000437312 457
84 3300005367 Ga0070667_100166267 Ga0070667_1001662672 457
85 3300005438 Ga0070701_10014111 Ga0070701_100141112 457
86 3300005456 Ga0070678_100083414 Ga0070678_1000834142 457
87 3300005544 Ga0070686_100026408 Ga0070686_1000264083 457
88 3300005840 Ga0068870_10028416 Ga0068870_100284162 457
89 3300009176 Ga0105242_10036970 Ga0105242_100369702 457
90 3300013308 Ga0157375_10045977 Ga0157375_100459772 457
91 3300014325 Ga0163163_10075642 Ga0163163_100756422 457
92 3300014326 Ga0157380_10027151 Ga0157380_100271512 457
93 3300014326 Ga0157380_10065520 Ga0157380_100655202 457
94 3300025893 Ga0207682_10022140 Ga0207682_100221402 457
95 3300025901 Ga0207688_10008615 Ga0207688_100086155 457
96 3300025926 Ga0207659_10014300 Ga0207659_100143004 457
97 3300025933 Ga0207706_10058882 Ga0207706_100588822 457
98 3300025934 Ga0207686_10013484 Ga0207686_100134842 457
99 3300025938 Ga0207704_10036341 Ga0207704_100363412 457
100 3300025940 Ga0207691_10016395 Ga0207691_100163953 457
101 3300025940 Ga0207691_10097080 Ga0207691_100970802 457
102 3300025942 Ga0207689_10131647 Ga0207689_101316472 457
103 3300025960 Ga0207651_10005070 Ga0207651_100050705 457
104 3300025972 Ga0207668_10088080 Ga0207668_100880802 457
105 3300026075 Ga0207708_10014150 Ga0207708_100141502 457
106 3300026089 Ga0207648_10001228 Ga0207648_1000122816 457
107 3300026089 Ga0207648_10014441 Ga0207648_100144416 457
108 3300026116 Ga0207674_10061161 Ga0207674_100611612 457
109 3300026118 Ga0207675_100007350 Ga0207675_1000073505 457
110 3300026118 Ga0207675_100135983 Ga0207675_1001359832 457
111 3300026121 Ga0207683_10052137 Ga0207683_100521372 457
112 3300031911 Ga0307412_10038044 Ga0307412_100380443 457
113 3300041999 Ga0439433_0000694 Ga0439433_0000694_1034_2542 457
114 3300042006 Ga0439432_020697 Ga0439432_020697_585_2093 457
115 3300042007 Ga0439449_0000538 Ga0439449_0000538_11303_12811 457
116 3300048928 Ga0496125_0000077 Ga0496125_0000077_152346_153899 457
117 iso_pu_bacteria 2857720070 2857720635 457
118 iso_pu_bacteria 2904430863 2904431867 457
119 iso_pu_bacteria 2904501621 2904504379 457
120 iso_pu_bacteria 2908674828 2908676601 457
121 iso_pu_bacteria 2909074476 2909077276 457
122 iso_pu_bacteria 2919039151 2919041674 457
123 iso_pu_bacteria 2928090899 2928091412 457
124 iso_pu_bacteria 2928500415 2928502917 457
125 iso_pu_bacteria 2995726249 2995726452 457
126 3300005353 Ga0070669_100114200 Ga0070669_1001142002 458
127 3300005438 Ga0070701_10020097 Ga0070701_100200972 458
128 3300005440 Ga0070705_100009060 Ga0070705_1000090604 458
129 3300005441 Ga0070700_100010419 Ga0070700_1000104194 458
130 3300005545 Ga0070695_100004118 Ga0070695_1000041181 458
131 3300005549 Ga0070704_100093450 Ga0070704_1000934502 458
132 3300005615 Ga0070702_100062643 Ga0070702_1000626432 458
133 3300005719 Ga0068861_100000304 Ga0068861_10000030430 458
134 3300025907 Ga0207645_10017082 Ga0207645_100170824 458
135 3300025918 Ga0207662_10020288 Ga0207662_100202883 458
136 3300025945 Ga0207679_10014808 Ga0207679_100148082 458
137 3300026075 Ga0207708_10002053 Ga0207708_1000205311 458
138 3300026089 Ga0207648_10062188 Ga0207648_100621882 458
139 3300026118 Ga0207675_100002528 Ga0207675_1000025282 458
140 3300031548 Ga0307408_100108009 Ga0307408_1001080091 458
141 3300031852 Ga0307410_10168928 Ga0307410_101689282 458
142 3300049576 Ga0501040_0094509 Ga0501040_0094509_80_1594 458
143 3300049580 Ga0501046_0093417 Ga0501046_0093417_447_1946 458
144 iso_pu_bacteria 2857479173 2857480919 458
145 iso_pu_bacteria 2906799679 2906800910 458
146 3300005353 Ga0070669_100008251 Ga0070669_1000082514 459
147 3300005354 Ga0070675_100094964 Ga0070675_1000949642 459
148 3300025926 Ga0207659_10072349 Ga0207659_100723492 459
149 3300026116 Ga0207674_10077391 Ga0207674_100773912 459
150 3300046683 Ga0495658_0011849 Ga0495658_0011849_1483_2964 459
151 3300049572 Ga0501036_0029258 Ga0501036_0029258_1254_2768 459
152 3300049575 Ga0501039_0023928 Ga0501039_0023928_1866_3380 459
153 3300049577 Ga0501041_0015650 Ga0501041_0015650_1606_3120 459
154 3300049580 Ga0501046_0082220 Ga0501046_0082220_739_2253 459
155 3300049582 Ga0501048_0023310 Ga0501048_0023310_1398_2912 459
156 3300049587 Ga0501071_0058981 Ga0501071_0058981_417_1931 459
157 3300049592 Ga0501076_0051760 Ga0501076_0051760_455_1969 459
158 3300049593 Ga0501077_0062357 Ga0501077_0062357_70_1584 459
159 3300049742 Ga0501080_0129145 Ga0501080_0129145_278_1792 459
160 3300049743 Ga0501081_0098261 Ga0501081_0098261_521_2035 459
161 3300049824 Ga0501045_0055306 Ga0501045_0055306_324_1838 459
162 3300005331 Ga0070670_100002768 Ga0070670_1000027681 460
163 3300005841 Ga0068863_100059135 Ga0068863_1000591352 460
164 3300005844 Ga0068862_100033590 Ga0068862_1000335902 460
165 3300006871 Ga0075434_100006370 Ga0075434_1000063705 460
166 3300007076 Ga0075435_100014641 Ga0075435_1000146413 460
167 3300009147 Ga0114129_10109281 Ga0114129_101092811 460
168 3300025923 Ga0207681_10008310 Ga0207681_100083104 460
169 3300026088 Ga0207641_10107937 Ga0207641_101079372 460
170 3300050512 nmdc:mga0n895_3782_c1 nmdc:mga0n895_3782_c1_6383_7888 460
171 3300050513 nmdc:mga0rr50_11691_c1 nmdc:mga0rr50_11691_c1_2720_4225 460
172 3300050515 nmdc:mga0a205_2635_c1 nmdc:mga0a205_2635_c1_6132_7637 460
173 iso_pu_bacteria 2643221553 2643783793 460
174 iso_pu_bacteria 2747842429 2747954381 460
175 iso_pu_bacteria 2773857759 2774383245 460
176 iso_pu_bacteria 2852677369 2852679724 460
177 iso_pu_bacteria 2908678064 2908678128 460
178 iso_pu_bacteria 2977251589 2977253419 460
179 3300005334 Ga0068869_100011180 Ga0068869_1000111802 461
180 3300005355 Ga0070671_100021400 Ga0070671_1000214005 461
181 3300005364 Ga0070673_100005544 Ga0070673_1000055446 461
182 3300005367 Ga0070667_100162459 Ga0070667_1001624592 461
183 3300005455 Ga0070663_100039997 Ga0070663_1000399971 461
184 3300005543 Ga0070672_100036223 Ga0070672_1000362232 461
185 3300005842 Ga0068858_100012391 Ga0068858_1000123915 461
186 3300006871 Ga0075434_100021481 Ga0075434_1000214814 461
187 3300014325 Ga0163163_10052087 Ga0163163_100520873 461
188 3300025893 Ga0207682_10007660 Ga0207682_100076603 461
189 3300025926 Ga0207659_10139615 Ga0207659_101396152 461
190 3300025931 Ga0207644_10007165 Ga0207644_100071657 461
191 3300025940 Ga0207691_10021795 Ga0207691_100217954 461
192 3300025942 Ga0207689_10044778 Ga0207689_100447782 461
193 3300025960 Ga0207651_10005509 Ga0207651_100055093 461
194 3300026035 Ga0207703_10008351 Ga0207703_100083516 461
195 3300026067 Ga0207678_10059610 Ga0207678_100596102 461
196 3300028381 Ga0268264_10097922 Ga0268264_100979222 461
197 3300050512 nmdc:mga0n895_27201_c1 nmdc:mga0n895_27201_c1_1906_3411 461
198 3300050515 nmdc:mga0a205_906_c2 nmdc:mga0a205_906_c2_1963_3468 461
199 iso_pu_bacteria 2808606368 2808883438 461
200 iso_pu_bacteria 2852677369 2852680273 461
201 iso_pu_bacteria 2852677369 2852680519 461
202 iso_pu_bacteria 2897561785 2897562164 461
203 3300025923 Ga0207681_10011524 Ga0207681_100115244 462
204 3300026118 Ga0207675_100082570 Ga0207675_1000825702 462
205 3300028380 Ga0268265_10058680 Ga0268265_100586802 462
206 3300048921 Ga0496118_0014473 Ga0496118_0014473_5386_6924 462
207 iso_pu_bacteria 2808606306 2808630350 462
208 iso_pu_bacteria 2932398195 2932401233 462
209 iso_pu_bacteria 8055037949 8055039685 462
210 3300005330 Ga0070690_100016088 Ga0070690_1000160882 463
211 3300005333 Ga0070677_10004906 Ga0070677_100049063 463
212 3300005334 Ga0068869_100028604 Ga0068869_1000286042 463
213 3300005335 Ga0070666_10057436 Ga0070666_100574362 463
214 3300005353 Ga0070669_100014653 Ga0070669_1000146534 463
215 3300005355 Ga0070671_100014368 Ga0070671_1000143682 463
216 3300005366 Ga0070659_100016507 Ga0070659_1000165073 463
217 3300005367 Ga0070667_100166802 Ga0070667_1001668022 463
218 3300005441 Ga0070700_100012316 Ga0070700_1000123163 463
219 3300005455 Ga0070663_100109196 Ga0070663_1001091962 463
220 3300005459 Ga0068867_100012033 Ga0068867_1000120334 463
221 3300005466 Ga0070685_10003653 Ga0070685_100036536 463
222 3300005543 Ga0070672_100034450 Ga0070672_1000344502 463
223 3300005544 Ga0070686_100029107 Ga0070686_1000291073 463
224 3300005564 Ga0070664_100017424 Ga0070664_1000174244 463
225 3300005615 Ga0070702_100125155 Ga0070702_1001251551 463
226 3300005617 Ga0068859_100113573 Ga0068859_1001135732 463
227 3300005719 Ga0068861_100011152 Ga0068861_1000111524 463
228 3300005840 Ga0068870_10005280 Ga0068870_100052803 463
229 3300005841 Ga0068863_100152263 Ga0068863_1001522632 463
230 3300005842 Ga0068858_100042591 Ga0068858_1000425912 463
231 3300005843 Ga0068860_100037665 Ga0068860_1000376652 463
232 3300005844 Ga0068862_100003413 Ga0068862_10000341310 463
233 3300006852 Ga0075433_10005182 Ga0075433_100051825 463
234 3300006871 Ga0075434_100022973 Ga0075434_1000229735 463
235 3300006931 Ga0097620_100113569 Ga0097620_1001135692 463
236 3300007076 Ga0075435_100051354 Ga0075435_1000513541 463
237 3300009094 Ga0111539_10022889 Ga0111539_100228895 463
238 3300009176 Ga0105242_10063500 Ga0105242_100635002 463
239 3300009553 Ga0105249_10048266 Ga0105249_100482662 463
240 3300011119 Ga0105246_10063170 Ga0105246_100631701 463
241 3300013308 Ga0157375_10213158 Ga0157375_102131582 463
242 3300014326 Ga0157380_10008438 Ga0157380_100084384 463
243 3300014326 Ga0157380_10018603 Ga0157380_100186032 463
244 3300014745 Ga0157377_10066399 Ga0157377_100663992 463
245 3300014968 Ga0157379_10048229 Ga0157379_100482292 463
246 3300025315 Ga0207697_10031069 Ga0207697_100310692 463
247 3300025893 Ga0207682_10001725 Ga0207682_100017257 463
248 3300025901 Ga0207688_10004412 Ga0207688_100044124 463
249 3300025907 Ga0207645_10010048 Ga0207645_100100481 463
250 3300025908 Ga0207643_10002380 Ga0207643_100023805 463
251 3300025918 Ga0207662_10014183 Ga0207662_100141832 463
252 3300025932 Ga0207690_10016338 Ga0207690_100163383 463
253 3300025933 Ga0207706_10017346 Ga0207706_100173464 463
254 3300025934 Ga0207686_10035371 Ga0207686_100353712 463
255 3300025935 Ga0207709_10039110 Ga0207709_100391101 463
256 3300025937 Ga0207669_10065990 Ga0207669_100659902 463
257 3300025938 Ga0207704_10047787 Ga0207704_100477872 463
258 3300025940 Ga0207691_10010692 Ga0207691_100106922 463
259 3300025942 Ga0207689_10003005 Ga0207689_100030055 463
260 3300025972 Ga0207668_10152765 Ga0207668_101527651 463
261 3300026067 Ga0207678_10075767 Ga0207678_100757672 463
262 3300026075 Ga0207708_10015659 Ga0207708_100156592 463
263 3300026088 Ga0207641_10032491 Ga0207641_100324913 463
264 3300026089 Ga0207648_10144905 Ga0207648_101449052 463
265 3300027907 Ga0207428_10016869 Ga0207428_100168695 463
266 3300028380 Ga0268265_10059442 Ga0268265_100594422 463
267 3300042436 Ga0439435_0020406 Ga0439435_0020406_107_1672 463
268 3300050511 nmdc:mga08y16_67632_c1 nmdc:mga08y16_67632_c1_1861_3372 463
269 3300050512 nmdc:mga0n895_9497_c1 nmdc:mga0n895_9497_c1_5166_6677 463
270 3300050513 nmdc:mga0rr50_46262_c1 nmdc:mga0rr50_46262_c1_48_1559 463
271 3300050515 nmdc:mga0a205_22308_c1 nmdc:mga0a205_22308_c1_2646_4157 463
272 3300050515 nmdc:mga0a205_33952_c1 nmdc:mga0a205_33952_c1_1858_3357 463
273 3300005843 Ga0068860_100160445 Ga0068860_1001604452 464
274 3300028381 Ga0268264_10113826 Ga0268264_101138262 464
275 3300049592 Ga0501076_0030958 Ga0501076_0030958_1411_2904 464
276 3300003203 JGI25406J46586_10008494 JGI25406J46586_100084944 465
277 3300005437 Ga0070710_10049325 Ga0070710_100493252 465
278 3300005985 Ga0081539_10006449 Ga0081539_1000644915 465
279 3300014326 Ga0157380_10068861 Ga0157380_100688612 465
280 3300027907 Ga0207428_10087907 Ga0207428_100879072 465
281 3300041413 Ga0439465_0009893 Ga0439465_0009893_472_2007 465
282 3300003203 JGI25406J46586_10000839 JGI25406J46586_1000083912 467
283 3300005985 Ga0081539_10000561 Ga0081539_1000056157 467
284 3300006844 Ga0075428_100017045 Ga0075428_1000170453 467
285 3300032005 Ga0307411_10073999 Ga0307411_100739992 467

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01970

TctA

Tripartite tricarboxylate transporter TctA family

16

439

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jbw-assembly2.cif.gz_H crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.2318 174 343
5oge-assembly3.cif.gz_H-2 crystal structure of a nucleotide sugar transporter 0.2253 133 454
5oge-assembly3.cif.gz_H-2 crystal structure of a nucleotide sugar transporter 0.2204 133 454
4mm4-assembly2.cif.gz_B crystal structure of leubat (delta13 mutant) in complex with paroxetine 0.2121 46 459
7php-assembly1.cif.gz_A structure of multidrug and toxin compound extrusion (mate) transporter norm by nabfab-fiducial assisted cryo-em 0.2111 46 452
ID Description Score Start End Superfamily
af_Q8MS66_16_213_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3546 174 398 1.20.1250.20
af_P9WJX1_16_194_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.339 172 415 1.20.1250.20
af_P9WJX1_16_194_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3339 172 415 1.20.1250.20
af_Q8MS66_16_213_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3272 174 398 1.20.1250.20
af_Q4DWN2_110_302_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3146 174 394 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A382P608-F1-model_v4 DUF112 domain-containing protein 0.8497 111 455 GO:0016020
AF-A0A7Z9JGG0-F1-model_v4 C4-dicarboxylate ABC transporter permease 0.8381 68 429 GO:0016020
AF-A0A3D2QLS6-F1-model_v4 DUF112 domain-containing protein 0.8351 152 454 GO:0016020
AF-A0A382P608-F1-model_v4 DUF112 domain-containing protein 0.822 111 455 GO:0016020
AF-A0A1I5DJ62-F1-model_v4 TctA family transporter 0.8195 5 455 GO:0016020

Feature Viewer

pLDDT pTM Quality
71.9 0.62 Medium
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Predicted Structure (AlphaFold2)

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