F385289

General Info

Members Datasets Scaffolds Average Seq Length
282 232 564 373

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006425503|3006429120
Length 443
Sequence GTPESPTAGTATTSTGTGMTTTTNASTSANTTTTTNTNTTTTSNGTGTAHTAPGSATDVTGLTGAFTALYGTAPEGVWAAPGRVNLIGEHTDYNDGFVLPLALPHTARAAVARRADGALRLHSADVPGGVVEVAAGELAPGARDLGWAAYPAGVVWALREAGHEAGGIDLHLRSAVPTGAGLSSSAALETVTALAVNDLYGLGLPPGELARLAQRAENDFVGVPCGIMDQTASACCAEGHALHLDTRDLTRRQVPFDLAAEGLRLLVVDTRVSHDLADGAYAERRASCEEAARRLGVPALRDVTPEELAQAPGRLAGPGEETLFRRARHVVTENRRVEEVVALLAAGDTHAVGPLLTAGHASLRDDFEVSCAELDLAVGTACAAGALGARMTGGGFGGSAIVLVTEAAAVTVAEAVSAAFAAAGHRAPRIFPAVPSAGARRLA

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
68 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
70 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
106 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
107 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
115 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
116 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
117 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
118 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
119 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
120 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
121 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
122 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
123 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
124 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
131 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
132 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
133 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
134 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
135 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
136 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
137 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
138 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
143 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
144 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
145 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
146 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
147 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
148 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
149 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
150 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
156 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
157 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
158 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
159 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
160 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
161 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
182 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
183 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
184 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
185 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
186 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
187 2643221548 Streptomyces sp. Root55 Isolate Unclassified
188 2643221647 Streptomyces sp. Root369 Isolate Unclassified
189 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
190 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
191 2671180195 Frankia sp. CcI49 Isolate Nodule
192 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
193 2773857922 Frankia sp. CcI49 Isolate Nodule
194 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
195 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
196 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
197 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
198 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
199 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
200 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
201 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
202 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
203 2867428634 Streptomyces sp. RP5T Isolate Unclassified
204 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
205 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
206 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
207 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
208 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
209 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
210 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
211 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
212 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
213 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
214 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
215 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
216 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
217 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
218 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
219 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
220 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
221 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
222 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
223 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
224 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
225 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
226 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
227 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
228 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
229 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
230 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
231 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
232 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.5
Metatranscriptomes 1.06
Isolates 18.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.84
Nodule 1.42
Rhizoplane 4.96
Rhizosphere 80.85
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10015341 3300003316 Bacteria 4654
2 rootL2_10014460 3300003322 Bacteria 4454
3 JGI25160J50197_1026354 3300003354 Bacteria 1604
4 Ga0006562J51391_1016268 3300003578 Bacteria 12520
5 Ga0006562J51391_1016273 3300003578 Bacteria 7870
6 Ga0070658_10085329 3300005327 Bacteria 2596
7 Ga0070682_100004604 3300005337 Bacteria 7667
8 Ga0070689_100011906 3300005340 Bacteria 6246
9 Ga0070661_100137044 3300005344 Bacteria 1842
10 Ga0070692_10074344 3300005345 Bacteria 1817
11 Ga0070675_100132088 3300005354 Bacteria 2128
12 Ga0070671_100148323 3300005355 Bacteria 1980
13 Ga0070667_100171943 3300005367 Bacteria 1913
14 Ga0070713_100028978 3300005436 Bacteria 4377
15 Ga0070711_100017988 3300005439 Bacteria 4506
16 Ga0070705_100027507 3300005440 Bacteria 3106
17 Ga0070700_100057361 3300005441 Bacteria 2444
18 Ga0070663_100004909 3300005455 Bacteria 7894
19 Ga0070685_10015766 3300005466 Bacteria 4017
20 Ga0070707_100010618 3300005468 Bacteria 8577
21 Ga0070698_100031170 3300005471 Bacteria 5528
22 Ga0068853_100119977 3300005539 Bacteria 2344
23 Ga0068853_100137894 3300005539 Bacteria 2188
24 Ga0070672_100144239 3300005543 Bacteria 1966
25 Ga0070686_100053840 3300005544 Bacteria 2572
26 Ga0070696_100017124 3300005546 Bacteria 4891
27 Ga0070665_100006607 3300005548 Bacteria 11785
28 Ga0070664_100094962 3300005564 Bacteria 2586
29 Ga0068857_100192110 3300005577 Bacteria 1859
30 Ga0068854_100138428 3300005578 Bacteria 1865
31 Ga0068856_100010200 3300005614 Bacteria 9134
32 Ga0070702_100012432 3300005615 Bacteria 4266
33 Ga0068852_100059828 3300005616 Bacteria 3305
34 Ga0068864_100011429 3300005618 Bacteria 7332
35 Ga0068864_100137178 3300005618 Bacteria 2204
36 Ga0068861_100417394 3300005719 Bacteria 1195
37 Ga0068851_10002943 3300005834 Bacteria 7524
38 Ga0068870_10000614 3300005840 Bacteria 13559
39 Ga0068863_100004813 3300005841 Bacteria 13297
40 Ga0068863_100044000 3300005841 Bacteria 4239
41 Ga0068863_100046334 3300005841 Bacteria 4126
42 Ga0068858_100248028 3300005842 Bacteria 1691
43 Ga0068860_100200546 3300005843 Bacteria 1933
44 Ga0075363_100007887 3300006048 Bacteria 4928
45 Ga0075367_10007696 3300006178 Bacteria 5535
46 Ga0097621_100104585 3300006237 Bacteria 2386
47 Ga0068871_100144142 3300006358 Bacteria 2027
48 Ga0075431_100064371 3300006847 Bacteria 3786
49 Ga0075433_10038030 3300006852 Bacteria 4154
50 Ga0075434_100043299 3300006871 Bacteria 4464
51 Ga0075429_100049720 3300006880 Bacteria 3647
52 Ga0075436_100026729 3300006914 Bacteria 3974
53 Ga0075435_100068499 3300007076 Bacteria 2891
54 Ga0105240_10260624 3300009093 Bacteria 2000
55 Ga0105245_10054355 3300009098 Bacteria 3596
56 Ga0105247_10018074 3300009101 Bacteria 4228
57 Ga0114129_10213863 3300009147 Bacteria 2605
58 Ga0114129_10528406 3300009147 Bacteria 1537
59 Ga0105243_10074750 3300009148 Bacteria 2749
60 Ga0105243_10084186 3300009148 Bacteria 2604
61 Ga0105241_10019334 3300009174 Bacteria 5022
62 Ga0105248_10023919 3300009177 Bacteria 6791
63 Ga0105248_10025384 3300009177 Bacteria 6589
64 Ga0105237_10065993 3300009545 Bacteria 3614
65 Ga0105238_10153807 3300009551 Bacteria 2275
66 Ga0105239_10095790 3300010375 Bacteria 3278
67 Ga0105246_10006687 3300011119 Bacteria 7048
68 Ga0157374_10182159 3300013296 Bacteria 2052
69 Ga0157372_10031083 3300013307 Bacteria 5846
70 Ga0157372_10088611 3300013307 Bacteria 3514
71 Ga0163163_10005539 3300014325 Bacteria 10935
72 Ga0163163_10144331 3300014325 Bacteria 2423
73 Ga0182008_10000608 3300014497 Bacteria 26318
74 Ga0182008_10093602 3300014497 Bacteria 1483
75 Ga0157377_10052814 3300014745 Bacteria 2296
76 Ga0157379_10008184 3300014968 Bacteria 9079
77 Ga0157376_10069409 3300014969 Bacteria 2988
78 Ga0182007_10001426 3300015262 Bacteria 12836
79 Ga0206354_10757468 3300020081 Bacteria 3031
80 Ga0207426_1001234 3300025302 Bacteria 22502
81 Ga0207426_1004172 3300025302 Bacteria 7214
82 Ga0207426_1030770 3300025302 Bacteria 1757
83 Ga0207426_1036382 3300025302 Bacteria 1565
84 Ga0207656_10001682 3300025321 Bacteria 7348
85 Ga0207688_10007599 3300025901 Bacteria 5900
86 Ga0207647_10005250 3300025904 Bacteria 9535
87 Ga0207699_10041088 3300025906 Bacteria 2668
88 Ga0207645_10023626 3300025907 Bacteria 3991
89 Ga0207643_10000204 3300025908 Bacteria 41257
90 Ga0207705_10045408 3300025909 Bacteria 3157
91 Ga0207684_10037500 3300025910 Bacteria 4113
92 Ga0207654_10010773 3300025911 Bacteria 4656
93 Ga0207662_10214440 3300025918 Bacteria 1251
94 Ga0207657_10023397 3300025919 Bacteria 5753
95 Ga0207649_10003561 3300025920 Bacteria 8509
96 Ga0207646_10011418 3300025922 Bacteria 8611
97 Ga0207650_10002710 3300025925 Bacteria 12237
98 Ga0207644_10025966 3300025931 Bacteria 4031
99 Ga0207691_10181560 3300025940 Bacteria 1839
100 Ga0207689_10000223 3300025942 Bacteria 50338
101 Ga0207661_10060674 3300025944 Bacteria 3052
102 Ga0207661_10112199 3300025944 Bacteria 2307
103 Ga0207679_10012429 3300025945 Bacteria 5552
104 Ga0207679_10259796 3300025945 Bacteria 1481
105 Ga0207640_10105172 3300025981 Bacteria 1988
106 Ga0207658_10138360 3300025986 Bacteria 1967
107 Ga0207677_10011268 3300026023 Bacteria 5090
108 Ga0207703_10323655 3300026035 Bacteria 1412
109 Ga0207639_10110523 3300026041 Bacteria 2239
110 Ga0207678_10002516 3300026067 Bacteria 16688
111 Ga0207708_10013026 3300026075 Bacteria 6204
112 Ga0207702_10007108 3300026078 Bacteria 9577
113 Ga0207641_10029800 3300026088 Bacteria 4513
114 Ga0207641_10043609 3300026088 Bacteria 3768
115 Ga0207641_10069581 3300026088 Bacteria 3022
116 Ga0207676_10007069 3300026095 Bacteria 7955
117 Ga0207676_10064488 3300026095 Bacteria 2914
118 Ga0207683_10000804 3300026121 Bacteria 28698
119 Ga0209371_1028353 3300027312 Bacteria 1250
120 Ga0207428_10033322 3300027907 Bacteria 4232
121 Ga0268266_10061226 3300028379 Bacteria 3246
122 Ga0268256_1032270 3300030500 Bacteria 1250
123 Ga0307513_10008358 3300031456 Bacteria 13256
124 Ga0307508_10002248 3300031616 Bacteria 20579
125 Ga0307508_10013477 3300031616 Bacteria 7477
126 Ga0307514_10051014 3300031649 Bacteria 3208
127 Ga0307405_10097202 3300031731 Bacteria 1965
128 Ga0307406_10002642 3300031901 Bacteria 9756
129 Ga0307409_100074276 3300031995 Bacteria 2716
130 Ga0307416_100035731 3300032002 Bacteria 3800
131 Ga0307415_100000010 3300032126 Bacteria 88681
132 Ga0373935_0087386 3300035692 Bacteria 2036
133 Ga0395898_0004515 3300037466 Bacteria 15209
134 Ga0395898_0035415 3300037466 Bacteria 4963
135 Ga0395898_0098006 3300037466 Bacteria 2815
136 Ga0439436_0000843 3300041404 Bacteria 8375
137 Ga0451853_0593855 3300041512 Bacteria 2155
138 Ga0451853_2699856 3300041512 Bacteria 1724
139 Ga0439449_0049819 3300042007 Bacteria 1549
140 Ga0439457_000016 3300042014 Bacteria 35777
141 Ga0450894_000694 3300042131 Bacteria 5597
142 Ga0450898_008210 3300042134 Bacteria 1642
143 Ga0450899_000580 3300042135 Bacteria 4154
144 Ga0450906_000868 3300042145 Bacteria 6658
145 Ga0450908_009641 3300042184 Bacteria 1790
146 Ga0466969_0005563 3300044656 Bacteria 6701
147 Ga0466963_0010078 3300044694 Bacteria 5713
148 Ga0466959_0101384 3300045049 Bacteria 2060
149 Ga0466959_0262983 3300045049 Bacteria 1187
150 Ga0466967_0015341 3300045976 Bacteria 6001
151 Ga0495603_0000882 3300046455 Bacteria 17240
152 Ga0495603_0014993 3300046455 Bacteria 4686
153 Ga0495603_0024207 3300046455 Bacteria 3671
154 Ga0495603_0035092 3300046455 Bacteria 3014
155 Ga0495629_0005160 3300046459 Bacteria 9770
156 Ga0495629_0011327 3300046459 Bacteria 6478
157 Ga0495651_0019571 3300046462 Bacteria 5250
158 Ga0495653_0075605 3300046463 Bacteria 2506
159 Ga0495664_0032381 3300046477 Bacteria 3067
160 Ga0495585_0030635 3300046492 Bacteria 3059
161 Ga0495594_0001837 3300046499 Bacteria 11047
162 Ga0495594_0026852 3300046499 Bacteria 3100
163 Ga0495618_0009549 3300046514 Bacteria 5859
164 Ga0495630_0167099 3300046517 Bacteria 1675
165 Ga0495652_0039510 3300046529 Bacteria 4080
166 Ga0495652_0077534 3300046529 Bacteria 2754
167 Ga0495622_0002334 3300046557 Bacteria 9236
168 Ga0495634_0027380 3300046642 Bacteria 3965
169 Ga0495635_0021468 3300046663 Bacteria 4501
170 Ga0495588_0093030 3300046674 Bacteria 1580
171 Ga0495657_0018102 3300046675 Bacteria 5105
172 Ga0495599_0161682 3300046678 Bacteria 1384
173 Ga0495623_0097372 3300046679 Bacteria 1797
174 Ga0495624_0094917 3300046690 Bacteria 1838
175 Ga0495636_0013388 3300047318 Bacteria 3256
176 Ga0495676_0003194 3300047321 Bacteria 14809
177 Ga0495676_0003639 3300047321 Bacteria 13983
178 Ga0495675_0097430 3300047444 Bacteria 1843
179 Ga0495684_0010446 3300047471 Bacteria 7180
180 Ga0495684_0043413 3300047471 Bacteria 3442
181 Ga0495602_0110123 3300048088 Bacteria 2239
182 Ga0495614_0000349 3300048089 Bacteria 18391
183 Ga0496102_0006094 3300048905 Bacteria 10280
184 Ga0496104_0014759 3300048907 Bacteria 7059
185 Ga0496105_0036932 3300048908 Bacteria 4025
186 Ga0496106_0010441 3300048909 Bacteria 6858
187 Ga0496106_0069227 3300048909 Bacteria 2693
188 Ga0496108_0021369 3300048911 Bacteria 5318
189 Ga0496109_0009727 3300048912 Bacteria 8207
190 Ga0496109_0171688 3300048912 Bacteria 2034
191 Ga0496110_0033851 3300048913 Bacteria 4423
192 Ga0496111_0001628 3300048914 Bacteria 13010
193 Ga0496111_0016615 3300048914 Bacteria 5074
194 Ga0496112_0160243 3300048915 Bacteria 2216
195 Ga0496113_0121738 3300048916 Bacteria 2040
196 Ga0501031_0021148 3300049568 Bacteria 4244
197 Ga0501032_0012000 3300049569 Bacteria 6203
198 Ga0501032_0025139 3300049569 Bacteria 4106
199 Ga0501032_0078964 3300049569 Bacteria 2191
200 Ga0501034_0033066 3300049571 Bacteria 5251
201 Ga0501036_0032166 3300049572 Bacteria 4432
202 Ga0501036_0183871 3300049572 Bacteria 1759
203 Ga0501037_0055825 3300049573 Bacteria 2887
204 Ga0501038_0000244 3300049574 Bacteria 46048
205 Ga0501038_0025419 3300049574 Bacteria 5279
206 Ga0501038_0066837 3300049574 Bacteria 3060
207 Ga0501043_0011928 3300049579 Bacteria 6800
208 Ga0501043_0016261 3300049579 Bacteria 5835
209 Ga0501046_0034044 3300049580 Bacteria 4113
210 Ga0501047_0035594 3300049581 Bacteria 4809
211 Ga0501047_0063164 3300049581 Bacteria 3572
212 Ga0501047_0072977 3300049581 Bacteria 3304
213 Ga0501047_0163508 3300049581 Bacteria 2097
214 Ga0501047_0418929 3300049581 Bacteria 1171
215 Ga0501048_0107732 3300049582 Bacteria 1967
216 Ga0501067_0169530 3300049583 Bacteria 1216
217 Ga0501080_0115413 3300049742 Bacteria 2490
218 Ga0501035_0009584 3300049822 Bacteria 9005
219 Ga0501035_0009681 3300049822 Bacteria 8963
220 Ga0501044_0016977 3300049823 Bacteria 7809
221 Ga0501044_0130297 3300049823 Bacteria 2509
222 nmdc:mga06z11_2081_c1 3300050494 Bacteria 7594
223 nmdc:mga05p37_58801_c1 3300050507 Bacteria 4734
224 nmdc:mga06r32_89321_c1 3300050510 Bacteria 3008
225 nmdc:mga08y16_11933_c1 3300050511 Bacteria 9125
226 nmdc:mga08x19_13868_c1 3300050514 Bacteria 4881
227 nmdc:mga0a205_16772_c1 3300050515 Bacteria 6859
228 nmdc:mga0a205_20234_c1 3300050515 Bacteria 6277
229 Ga0495619_0108711 3300053085 Bacteria 1893
230 Ga0495619_0232259 3300053085 Bacteria 1278
231 3006429120 3006425503 Bacteria 6491253
232 2554258082 2554235005 Bacteria 6457341
233 2585300147 2582581312 Bacteria 7308206
234 2585308677 2582581313 Bacteria 10042643
235 2616904020 2616644941 Bacteria 8510691
236 2643765666 2643221548 Bacteria 8053412
237 2644264075 2643221647 Bacteria 10741251
238 2644436953 2643221678 Bacteria 9540101
239 2644459778 2643221682 Bacteria 6743283
240 2671836571 2671180195 Bacteria 9757215
241 2689993429 2687453743 Bacteria 8361025
242 2774854727 2773857922 Bacteria 9757215
243 2785343554 2784746763 Bacteria 9783172
244 2785369257 2784746768 Bacteria 10036182
245 2793980133 2791355406 Bacteria 11364898
246 2808841847 2808606359 Bacteria 9866990
247 2819697898 2818991463 Bacteria 7948711
248 2862179583 2862178590 Bacteria 8583590
249 2862285456 2862281513 Bacteria 9621493
250 2862391615 2862382967 Bacteria 10317375
251 2863404932 2863404153 Bacteria 9672205
252 2867430594 2867428634 Bacteria 9590268
253 2877681293 2877676314 Bacteria 9512378
254 2919469709 2919468124 Bacteria 9133025
255 2954007708 2954002825 Bacteria 9173742
256 2954386436 2954380949 Bacteria 10050426
257 2954697113 2954691527 Bacteria 10720516
258 2954705023 2954701450 Bacteria 10834262
259 2954716419 2954711539 Bacteria 10867210
260 2954726363 2954721474 Bacteria 10456478
261 2954735447 2954731030 Bacteria 10243860
262 2954745288 2954740390 Bacteria 10229294
263 2954754302 2954749733 Bacteria 10366972
264 2954764262 2954759201 Bacteria 9358192
265 2966602745 2966598605 Bacteria 7676064
266 2990061456 2990059506 Bacteria 9321252
267 2997454576 2997451912 Bacteria 8492419
268 2997601003 2997600082 Bacteria 9896405
269 3006324288 3006321560 Bacteria 8247479
270 3006394564 3006393351 Bacteria 6615579
271 8003862202 8003856774 Bacteria 7675274
272 8008579021 8008574985 Bacteria 7815457
273 8047896652 8047893842 Bacteria 11723082
274 8048134658 8048127548 Bacteria 11053136
275 8048362283 8048356638 Bacteria 11044339
276 8048373665 8048369669 Bacteria 11666822
277 8048384577 8048379754 Bacteria 11877923
278 8048412258 8048406513 Bacteria 8936924
279 8054164121 8054160619 Bacteria 7783213
280 8056668804 8056667051 Bacteria 6953971
281 8056668814 8056667051 Bacteria 6953971
282 8056833707 8056829672 Bacteria 9045328
283 rootH1_10015341
284 rootL2_10014460
285 JGI25160J50197_1026354
286 Ga0006562J51391_1016268
287 Ga0006562J51391_1016273
288 Ga0070658_10085329
289 Ga0070682_100004604
290 Ga0070689_100011906
291 Ga0070661_100137044
292 Ga0070692_10074344
293 Ga0070675_100132088
294 Ga0070671_100148323
295 Ga0070667_100171943
296 Ga0070713_100028978
297 Ga0070711_100017988
298 Ga0070705_100027507
299 Ga0070700_100057361
300 Ga0070663_100004909
301 Ga0070685_10015766
302 Ga0070707_100010618
303 Ga0070698_100031170
304 Ga0068853_100119977
305 Ga0068853_100137894
306 Ga0070672_100144239
307 Ga0070686_100053840
308 Ga0070696_100017124
309 Ga0070665_100006607
310 Ga0070664_100094962
311 Ga0068857_100192110
312 Ga0068854_100138428
313 Ga0068856_100010200
314 Ga0070702_100012432
315 Ga0068852_100059828
316 Ga0068864_100011429
317 Ga0068864_100137178
318 Ga0068861_100417394
319 Ga0068851_10002943
320 Ga0068870_10000614
321 Ga0068863_100004813
322 Ga0068863_100044000
323 Ga0068863_100046334
324 Ga0068858_100248028
325 Ga0068860_100200546
326 Ga0075363_100007887
327 Ga0075367_10007696
328 Ga0097621_100104585
329 Ga0068871_100144142
330 Ga0075431_100064371
331 Ga0075433_10038030
332 Ga0075434_100043299
333 Ga0075429_100049720
334 Ga0075436_100026729
335 Ga0075435_100068499
336 Ga0105240_10260624
337 Ga0105245_10054355
338 Ga0105247_10018074
339 Ga0114129_10213863
340 Ga0114129_10528406
341 Ga0105243_10074750
342 Ga0105243_10084186
343 Ga0105241_10019334
344 Ga0105248_10023919
345 Ga0105248_10025384
346 Ga0105237_10065993
347 Ga0105238_10153807
348 Ga0105239_10095790
349 Ga0105246_10006687
350 Ga0157374_10182159
351 Ga0157372_10031083
352 Ga0157372_10088611
353 Ga0163163_10005539
354 Ga0163163_10144331
355 Ga0182008_10000608
356 Ga0182008_10093602
357 Ga0157377_10052814
358 Ga0157379_10008184
359 Ga0157376_10069409
360 Ga0182007_10001426
361 Ga0206354_10757468
362 Ga0207426_1001234
363 Ga0207426_1004172
364 Ga0207426_1030770
365 Ga0207426_1036382
366 Ga0207656_10001682
367 Ga0207688_10007599
368 Ga0207647_10005250
369 Ga0207699_10041088
370 Ga0207645_10023626
371 Ga0207643_10000204
372 Ga0207705_10045408
373 Ga0207684_10037500
374 Ga0207654_10010773
375 Ga0207662_10214440
376 Ga0207657_10023397
377 Ga0207649_10003561
378 Ga0207646_10011418
379 Ga0207650_10002710
380 Ga0207644_10025966
381 Ga0207691_10181560
382 Ga0207689_10000223
383 Ga0207661_10060674
384 Ga0207661_10112199
385 Ga0207679_10012429
386 Ga0207679_10259796
387 Ga0207640_10105172
388 Ga0207658_10138360
389 Ga0207677_10011268
390 Ga0207703_10323655
391 Ga0207639_10110523
392 Ga0207678_10002516
393 Ga0207708_10013026
394 Ga0207702_10007108
395 Ga0207641_10029800
396 Ga0207641_10043609
397 Ga0207641_10069581
398 Ga0207676_10007069
399 Ga0207676_10064488
400 Ga0207683_10000804
401 Ga0209371_1028353
402 Ga0207428_10033322
403 Ga0268266_10061226
404 Ga0268256_1032270
405 Ga0307513_10008358
406 Ga0307508_10002248
407 Ga0307508_10013477
408 Ga0307514_10051014
409 Ga0307405_10097202
410 Ga0307406_10002642
411 Ga0307409_100074276
412 Ga0307416_100035731
413 Ga0307415_100000010
414 Ga0373935_0087386
415 Ga0395898_0004515
416 Ga0395898_0035415
417 Ga0395898_0098006
418 Ga0439436_0000843
419 Ga0451853_0593855
420 Ga0451853_2699856
421 Ga0439449_0049819
422 Ga0439457_000016
423 Ga0450894_000694
424 Ga0450898_008210
425 Ga0450899_000580
426 Ga0450906_000868
427 Ga0450908_009641
428 Ga0466969_0005563
429 Ga0466963_0010078
430 Ga0466959_0101384
431 Ga0466959_0262983
432 Ga0466967_0015341
433 Ga0495603_0000882
434 Ga0495603_0014993
435 Ga0495603_0024207
436 Ga0495603_0035092
437 Ga0495629_0005160
438 Ga0495629_0011327
439 Ga0495651_0019571
440 Ga0495653_0075605
441 Ga0495664_0032381
442 Ga0495585_0030635
443 Ga0495594_0001837
444 Ga0495594_0026852
445 Ga0495618_0009549
446 Ga0495630_0167099
447 Ga0495652_0039510
448 Ga0495652_0077534
449 Ga0495622_0002334
450 Ga0495634_0027380
451 Ga0495635_0021468
452 Ga0495588_0093030
453 Ga0495657_0018102
454 Ga0495599_0161682
455 Ga0495623_0097372
456 Ga0495624_0094917
457 Ga0495636_0013388
458 Ga0495676_0003194
459 Ga0495676_0003639
460 Ga0495675_0097430
461 Ga0495684_0010446
462 Ga0495684_0043413
463 Ga0495602_0110123
464 Ga0495614_0000349
465 Ga0496102_0006094
466 Ga0496104_0014759
467 Ga0496105_0036932
468 Ga0496106_0010441
469 Ga0496106_0069227
470 Ga0496108_0021369
471 Ga0496109_0009727
472 Ga0496109_0171688
473 Ga0496110_0033851
474 Ga0496111_0001628
475 Ga0496111_0016615
476 Ga0496112_0160243
477 Ga0496113_0121738
478 Ga0501031_0021148
479 Ga0501032_0012000
480 Ga0501032_0025139
481 Ga0501032_0078964
482 Ga0501034_0033066
483 Ga0501036_0032166
484 Ga0501036_0183871
485 Ga0501037_0055825
486 Ga0501038_0000244
487 Ga0501038_0025419
488 Ga0501038_0066837
489 Ga0501043_0011928
490 Ga0501043_0016261
491 Ga0501046_0034044
492 Ga0501047_0035594
493 Ga0501047_0063164
494 Ga0501047_0072977
495 Ga0501047_0163508
496 Ga0501047_0418929
497 Ga0501048_0107732
498 Ga0501067_0169530
499 Ga0501080_0115413
500 Ga0501035_0009584
501 Ga0501035_0009681
502 Ga0501044_0016977
503 Ga0501044_0130297
504 nmdc:mga06z11_2081_c1
505 nmdc:mga05p37_58801_c1
506 nmdc:mga06r32_89321_c1
507 nmdc:mga08y16_11933_c1
508 nmdc:mga08x19_13868_c1
509 nmdc:mga0a205_16772_c1
510 nmdc:mga0a205_20234_c1
511 Ga0495619_0108711
512 Ga0495619_0232259
513 3006429120
514 2554258082
515 2585300147
516 2585308677
517 2616904020
518 2643765666
519 2644264075
520 2644436953
521 2644459778
522 2671836571
523 2689993429
524 2774854727
525 2785343554
526 2785369257
527 2793980133
528 2808841847
529 2819697898
530 2862179583
531 2862285456
532 2862391615
533 2863404932
534 2867430594
535 2877681293
536 2919469709
537 2954007708
538 2954386436
539 2954697113
540 2954705023
541 2954716419
542 2954726363
543 2954735447
544 2954745288
545 2954754302
546 2954764262
547 2966602745
548 2990061456
549 2997454576
550 2997601003
551 3006324288
552 3006394564
553 8003862202
554 8008579021
555 8047896652
556 8048134658
557 8048362283
558 8048373665
559 8048384577
560 8048412258
561 8054164121
562 8056668804
563 8056668814
564 8056833707

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10509

GalKase_gal_bdg

Galactokinase galactose-binding signature

64

113

0.95

PF08544

GHMP_kinases_C

GHMP kinases C terminal

340

422

0.94

PF00288

GHMP_kinases_N

GHMP kinases N terminal domain

149

237

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ter-assembly3.cif.gz_C crystal structure of a galactokinase from bifidobacterium infantis in complex with galactose 0.9561 2 318
6tep-assembly4.cif.gz_B crystal structure of a galactokinase from bifidobacterium infantis in complex with adp 0.9558 3 318
6tep-assembly3.cif.gz_C crystal structure of a galactokinase from bifidobacterium infantis in complex with adp 0.9488 3 318
6tep-assembly2.cif.gz_D crystal structure of a galactokinase from bifidobacterium infantis in complex with adp 0.9466 3 318
6ter-assembly3.cif.gz_C crystal structure of a galactokinase from bifidobacterium infantis in complex with galactose 0.9359 2 318
ID Description Score Start End Superfamily
af_P9WN63_1_186_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9658 20 201 3.30.230.10
af_P0A6T3_2_205_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9554 4 198 3.30.230.10
1s4eB01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9518 25 196 3.30.230.10
1s4eE01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9443 19 196 3.30.230.10
af_P9WN63_1_186_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9405 20 201 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A2V1NH34-F1-model_v4 Galactokinase (EC 2.7.1.6) (Galactose kinase) 0.9893 1 323 GO:0000287
GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A6G4XNY9-F1-model_v4 Galactokinase (EC 2.7.1.6) (Galactose kinase) 0.9881 4 322 GO:0000287
GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A7Y0BC12-F1-model_v4 Galactokinase (EC 2.7.1.6) (Galactose kinase) 0.987 6 322 GO:0000287
GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A2V1NH34-F1-model_v4 Galactokinase (EC 2.7.1.6) (Galactose kinase) 0.9863 1 323 GO:0000287
GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A6I5C3P5-F1-model_v4 Galactokinase (EC 2.7.1.6) 0.9861 94 322 GO:0004335
GO:0005524
GO:0005829
GO:0006012

Map