F385279

General Info

Members Datasets Scaffolds Average Seq Length
282 218 564 341

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2901300506|2901302651
Length 373
Sequence VRRCGNRRFLFRIWGAGMMPDTPDATTPGPGGRGEDPARPELTPERLLQLGMGFWPAKTLLSAVELGVFTRLADGPLDAPTLTEALGLHPRSALDFLDALVALQVLERDDGKYRNASDSALFLDRNQPSYVGGLLEMANARLYPFWGALTEALRTGLPQNESKRGGNLFGSIYNNEQGLRGFLQAMTGISVGAARAMAQRFPWQDYRTFIDIGAAQGALPVQIALAHPHLQGGGFDLPVVGPVFEEYVRSHGLQDRLRFYPGDFFSDPCPTADVLVLGHILHDWDLTQKRELLAKCYAALKPGGCLIVYDAIIDDDRRQNAFGLMVSLNMLIETQGGFDYTGAQCTGWMREAGFSQVRVEPLLGADSMVIGTK

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
8 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
57 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
89 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
90 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
105 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
106 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
111 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
115 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
118 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
121 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
122 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
123 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
124 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
127 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
128 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
129 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
130 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
133 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
134 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
135 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
136 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
137 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
138 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
139 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
140 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
141 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
142 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
143 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
144 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
145 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
146 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
147 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
148 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
149 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
150 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
153 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
154 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
157 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
158 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
159 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
160 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
161 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
162 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
163 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
164 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
165 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
166 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
172 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
173 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
180 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
181 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
183 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
184 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
185 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
186 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
187 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
188 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
189 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
192 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
193 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
194 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
195 2901300506 Cupriavidus sp. UYMSc13B Isolate Unclassified
196 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
197 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
198 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
199 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
200 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
201 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
202 2526164713 Paraburkholderia phenoliruptrix JPY366 Isolate Nodule
203 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
204 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
205 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
206 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
207 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
208 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
209 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
210 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
211 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
212 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
213 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
214 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
215 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
216 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
217 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule
218 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.49
Metatranscriptomes 0
Isolates 8.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.87
Nodule 4.26
Rhizoplane 6.74
Rhizosphere 66.31
Stem 0
Stem Tuber 0
Unclassified 4.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10017417 3300001989 Bacteria 2592
2 JGI24735J21928_10000156 3300002067 Bacteria 23959
3 JGI24735J21928_10002206 3300002067 Bacteria 6838
4 JGI25156J39149_1000608 3300002705 Bacteria 19880
5 JGI25156J39149_1001999 3300002705 Bacteria 7816
6 JGI25165J46597_1000998 3300003214 Bacteria 18793
7 Ga0055533_1000111 3300003756 Bacteria 97611
8 Ga0055533_1000438 3300003756 Bacteria 15845
9 Ga0055532_1000026 3300003758 Bacteria 238584
10 Ga0055527_1000018 3300003760 Bacteria 238584
11 Ga0055535_1000020 3300003761 Bacteria 238584
12 Ga0055542_1000031 3300003762 Bacteria 238584
13 Ga0055529_1000036 3300003763 Bacteria 238584
14 Ga0070683_100393795 3300005329 Bacteria 1321
15 Ga0070666_10234737 3300005335 Bacteria 1296
16 Ga0070680_100002405 3300005336 Bacteria 13860
17 Ga0070671_100003404 3300005355 Bacteria 12408
18 Ga0070674_100011003 3300005356 Bacteria 5487
19 Ga0070667_100024423 3300005367 Bacteria 5020
20 Ga0070667_100407455 3300005367 Bacteria 1238
21 Ga0070709_10119419 3300005434 Bacteria 1784
22 Ga0070714_100129377 3300005435 Unclassified 2255
23 Ga0070705_100204307 3300005440 Bacteria 1357
24 Ga0070694_100038516 3300005444 Bacteria 3178
25 Ga0070694_100122733 3300005444 Bacteria 1866
26 Ga0070708_100113701 3300005445 Bacteria 2490
27 Ga0070663_100222568 3300005455 Bacteria 1482
28 Ga0070698_100087181 3300005471 Bacteria 3108
29 Ga0070698_100370899 3300005471 Unclassified 1363
30 Ga0070698_100436531 3300005471 Unclassified 1244
31 Ga0070699_100001179 3300005518 Bacteria 24224
32 Ga0070697_100031214 3300005536 Bacteria 4284
33 Ga0070697_100098416 3300005536 Unclassified 2427
34 Ga0070672_100044770 3300005543 Bacteria 3419
35 Ga0070686_100080389 3300005544 Bacteria 2157
36 Ga0070704_100064704 3300005549 Bacteria 2629
37 Ga0068855_100078165 3300005563 Bacteria 3839
38 Ga0068857_100109419 3300005577 Bacteria 2483
39 Ga0070702_100096504 3300005615 Bacteria 1804
40 Ga0068858_100209337 3300005842 Bacteria 1845
41 Ga0068860_100175268 3300005843 Bacteria 2072
42 Ga0081540_1005313 3300005983 Bacteria 9634
43 Ga0070716_100027739 3300006173 Bacteria 3045
44 Ga0075428_100012962 3300006844 Bacteria 9272
45 Ga0075428_100117470 3300006844 Bacteria 2898
46 Ga0075430_100067530 3300006846 Bacteria 3001
47 Ga0075431_100208698 3300006847 Bacteria 1996
48 Ga0075429_100098908 3300006880 Unclassified 2545
49 Ga0075435_100370829 3300007076 Bacteria 1229
50 Ga0099794_10068953 3300007265 Bacteria 1730
51 Ga0105251_10000167 3300009011 Bacteria 67775
52 Ga0105240_10372590 3300009093 Bacteria 1614
53 Ga0111539_10005500 3300009094 Bacteria 16394
54 Ga0111539_10211442 3300009094 Bacteria 2260
55 Ga0114129_10098035 3300009147 Bacteria 4057
56 Ga0114129_10174232 3300009147 Bacteria 2931
57 Ga0114129_10519975 3300009147 Unclassified 1552
58 Ga0105243_10266237 3300009148 Bacteria 1537
59 Ga0105248_10036563 3300009177 Bacteria 5493
60 Ga0105238_10041064 3300009551 Bacteria 4686
61 Ga0105249_10320708 3300009553 Unclassified 1560
62 Ga0157370_10098911 3300013104 Bacteria 2734
63 Ga0157369_10101958 3300013105 Bacteria 3059
64 Ga0157369_10157914 3300013105 Bacteria 2395
65 Ga0157369_10261304 3300013105 Bacteria 1805
66 Ga0157378_10053753 3300013297 Bacteria 3586
67 Ga0163162_10114451 3300013306 Unclassified 2796
68 Ga0157375_10304296 3300013308 Bacteria 1758
69 Ga0157379_10051250 3300014968 Bacteria 3687
70 Ga0157379_10262325 3300014968 Bacteria 1570
71 Ga0213872_10045563 3300021361 Bacteria 1996
72 Ga0213874_10017366 3300021377 Bacteria 1929
73 Ga0213876_10062271 3300021384 Bacteria 1969
74 Ga0209674_100014 3300025226 Bacteria 704989
75 Ga0209674_100020 3300025226 Bacteria 672397
76 Ga0209672_100013 3300025228 Bacteria 740693
77 Ga0209147_100013 3300025229 Bacteria 660057
78 Ga0207427_102110 3300025231 Bacteria 5802
79 Ga0209258_100016 3300025242 Bacteria 668622
80 Ga0209258_101162 3300025242 Bacteria 10758
81 Ga0209148_1000020 3300025254 Bacteria 740693
82 Ga0209759_1000010 3300025256 Bacteria 430463
83 Ga0209759_1000083 3300025256 Bacteria 169561
84 Ga0209759_1004933 3300025256 Bacteria 4828
85 Ga0209233_1000153 3300025261 Bacteria 169839
86 Ga0209455_1000017 3300025272 Bacteria 740693
87 Ga0207426_1006989 3300025302 Bacteria 4794
88 Ga0207713_1000353 3300025735 Bacteria 50352
89 Ga0207647_10000602 3300025904 Bacteria 28003
90 Ga0207647_10017601 3300025904 Bacteria 4856
91 Ga0207685_10005741 3300025905 Unclassified 3309
92 Ga0207699_10184209 3300025906 Unclassified 1405
93 Ga0207646_10193918 3300025922 Bacteria 1835
94 Ga0207694_10145366 3300025924 Bacteria 1908
95 Ga0207664_10111919 3300025929 Unclassified 2272
96 Ga0207670_10091872 3300025936 Bacteria 2147
97 Ga0207669_10013892 3300025937 Bacteria 4019
98 Ga0207665_10096992 3300025939 Unclassified 2052
99 Ga0207691_10021023 3300025940 Bacteria 6166
100 Ga0207711_10018306 3300025941 Bacteria 5822
101 Ga0207711_10041402 3300025941 Bacteria 3923
102 Ga0207703_10093082 3300026035 Bacteria 2538
103 Ga0207678_10131432 3300026067 Bacteria 2136
104 Ga0207641_10003108 3300026088 Bacteria 14930
105 Ga0207674_10121376 3300026116 Bacteria 2581
106 Ga0209371_1008575 3300027312 Bacteria 3370
107 Ga0209588_1024643 3300027671 Bacteria 1900
108 Ga0268264_10090103 3300028381 Bacteria 2642
109 Ga0268256_1008968 3300030500 Bacteria 3370
110 Ga0265325_10001430 3300031241 Bacteria 16788
111 Ga0265331_10007450 3300031250 Bacteria 6328
112 Ga0265313_10006219 3300031595 Bacteria 8530
113 Ga0307508_10049720 3300031616 Bacteria 3734
114 Ga0265314_10113299 3300031711 Archaea 1720
115 Ga0265342_10136460 3300031712 Archaea 1371
116 Ga0307516_10006497 3300031730 Bacteria 13691
117 Ga0307412_10202141 3300031911 Bacteria 1510
118 Ga0373937_0017185 3300036401 Bacteria 6439
119 Ga0395900_0202266 3300037418 Bacteria 2009
120 Ga0395905_0000029 3300037471 Bacteria 293016
121 Ga0395905_0099474 3300037471 Bacteria 2731
122 Ga0395905_0116913 3300037471 Bacteria 2506
123 Ga0436364_0610382 3300037853 Bacteria 2095
124 Ga0436364_0694223 3300037853 Bacteria 1445
125 Ga0436364_0812430 3300037853 Bacteria 2616
126 Ga0436365_1013878 3300039437 Bacteria 3508
127 Ga0436365_1761497 3300039437 Bacteria 6172
128 Ga0436360_0013144 3300039438 Bacteria 1945
129 Ga0436361_0187505 3300039447 Bacteria 1832
130 Ga0436361_0204163 3300039447 Bacteria 16983
131 Ga0436361_1216709 3300039447 Bacteria 2475
132 Ga0436363_0659157 3300039450 Bacteria 8421
133 Ga0436362_1114585 3300039453 Bacteria 1265
134 Ga0466969_0059766 3300044656 Bacteria 1853
135 Ga0466966_0104427 3300044684 Bacteria 1750
136 Ga0466966_0186541 3300044684 Bacteria 1257
137 Ga0466961_0002467 3300044693 Bacteria 11472
138 Ga0466963_0048644 3300044694 Bacteria 2803
139 Ga0466957_0011555 3300044842 Bacteria 5099
140 Ga0466958_0153383 3300045836 Bacteria 1453
141 Ga0466967_0016259 3300045976 Bacteria 5860
142 Ga0495603_0002931 3300046455 Bacteria 10085
143 Ga0495590_0002458 3300046457 Bacteria 7669
144 Ga0495629_0013638 3300046459 Bacteria 5864
145 Ga0495629_0034442 3300046459 Bacteria 3580
146 Ga0495651_0188762 3300046462 Bacteria 1452
147 Ga0495653_0130133 3300046463 Bacteria 1783
148 Ga0495650_0001210 3300046471 Bacteria 27205
149 Ga0495650_0061594 3300046471 Bacteria 1502
150 Ga0495580_0000910 3300046472 Bacteria 25805
151 Ga0495580_0004700 3300046472 Bacteria 11452
152 Ga0495580_0024792 3300046472 Bacteria 4386
153 Ga0495582_0008325 3300046473 Bacteria 5723
154 Ga0495605_0104749 3300046474 Bacteria 1296
155 Ga0495639_0022319 3300046475 Bacteria 2776
156 Ga0495664_0189076 3300046477 Bacteria 1248
157 Ga0495585_0029835 3300046492 Bacteria 3103
158 Ga0495594_0036840 3300046499 Bacteria 2669
159 Ga0495596_0033067 3300046500 Bacteria 2059
160 Ga0495583_0086845 3300046506 Bacteria 1352
161 Ga0495606_0004880 3300046507 Bacteria 13136
162 Ga0495606_0148820 3300046507 Bacteria 1376
163 Ga0495618_0004977 3300046514 Bacteria 8119
164 Ga0495620_0035718 3300046515 Bacteria 2231
165 Ga0495628_0005598 3300046516 Bacteria 10995
166 Ga0495628_0253069 3300046516 Bacteria 1314
167 Ga0495666_0000886 3300046526 Bacteria 14008
168 Ga0495642_0004883 3300046528 Bacteria 5179
169 Ga0495642_0090051 3300046528 Bacteria 1298
170 Ga0495652_0153361 3300046529 Bacteria 1797
171 Ga0495654_0065889 3300046530 Bacteria 1728
172 Ga0495665_0114939 3300046531 Bacteria 1410
173 Ga0495586_0202021 3300046535 Bacteria 1127
174 Ga0495597_0005561 3300046542 Bacteria 6654
175 Ga0495645_0009414 3300046543 Bacteria 6826
176 Ga0495622_0023678 3300046557 Bacteria 2864
177 Ga0495667_0081196 3300046559 Bacteria 2108
178 Ga0495667_0182945 3300046559 Bacteria 1344
179 Ga0495635_0032803 3300046663 Bacteria 3602
180 Ga0495588_0065714 3300046674 Bacteria 1882
181 Ga0495588_0125542 3300046674 Bacteria 1353
182 Ga0495657_0151092 3300046675 Bacteria 1442
183 Ga0495613_0013141 3300046689 Bacteria 6152
184 Ga0495613_0069265 3300046689 Bacteria 2572
185 Ga0495649_0026946 3300046694 Bacteria 3191
186 Ga0495589_0005150 3300046794 Bacteria 6917
187 Ga0495589_0052642 3300046794 Bacteria 2011
188 Ga0495600_0114714 3300046809 Bacteria 1754
189 Ga0495581_0006826 3300047315 Bacteria 6622
190 Ga0495604_0002460 3300047317 Bacteria 14809
191 Ga0495604_0016302 3300047317 Bacteria 5938
192 Ga0495604_0066330 3300047317 Bacteria 2746
193 Ga0495604_0232515 3300047317 Bacteria 1264
194 Ga0495674_0146202 3300047319 Bacteria 1984
195 Ga0495680_0011226 3300047322 Bacteria 7954
196 Ga0495680_0218207 3300047322 Bacteria 1363
197 Ga0495683_0000623 3300047323 Bacteria 26480
198 Ga0495683_0004017 3300047323 Bacteria 8447
199 Ga0495687_007946 3300047443 Bacteria 6160
200 Ga0495687_038274 3300047443 Bacteria 2129
201 Ga0495675_0011575 3300047444 Bacteria 5538
202 Ga0495675_0047391 3300047444 Bacteria 2734
203 Ga0495675_0071122 3300047444 Bacteria 2196
204 Ga0495684_0023636 3300047471 Bacteria 4726
205 Ga0495593_0020019 3300047673 Bacteria 3747
206 Ga0495593_0032835 3300047673 Bacteria 2828
207 Ga0495602_0023411 3300048088 Bacteria 6020
208 Ga0495602_0065627 3300048088 Bacteria 3132
209 Ga0496100_0007823 3300048903 Bacteria 5930
210 Ga0496100_0050241 3300048903 Bacteria 2701
211 Ga0496101_0005003 3300048904 Bacteria 8418
212 Ga0496101_0182933 3300048904 Bacteria 1614
213 Ga0496102_0000258 3300048905 Bacteria 68544
214 Ga0496102_0031815 3300048905 Bacteria 4736
215 Ga0496103_0000326 3300048906 Bacteria 43556
216 Ga0496104_0028830 3300048907 Bacteria 5146
217 Ga0496106_0003588 3300048909 Bacteria 11566
218 Ga0496107_0001254 3300048910 Bacteria 15535
219 Ga0496109_0148061 3300048912 Bacteria 2197
220 Ga0496110_0008899 3300048913 Bacteria 8093
221 Ga0496111_0001957 3300048914 Bacteria 12225
222 Ga0496113_0000927 3300048916 Bacteria 15540
223 Ga0496113_0094800 3300048916 Bacteria 2306
224 Ga0496114_0000981 3300048917 Bacteria 21347
225 Ga0496115_0000379 3300048918 Bacteria 36717
226 Ga0496115_0009720 3300048918 Bacteria 7163
227 Ga0496115_0069760 3300048918 Bacteria 2848
228 Ga0496116_0009602 3300048919 Bacteria 8234
229 Ga0496117_0007366 3300048920 Bacteria 10769
230 Ga0496118_0004498 3300048921 Bacteria 16483
231 Ga0496121_0004621 3300048924 Bacteria 18325
232 Ga0496121_0039550 3300048924 Bacteria 4152
233 Ga0496122_0001672 3300048925 Bacteria 34402
234 Ga0496122_0037503 3300048925 Bacteria 3900
235 Ga0496123_0009691 3300048926 Bacteria 8636
236 Ga0496124_0004052 3300048927 Bacteria 17378
237 Ga0496125_0004681 3300048928 Bacteria 15592
238 Ga0496126_0000073 3300048929 Bacteria 236027
239 Ga0496126_0005843 3300048929 Bacteria 13905
240 Ga0501047_0004185 3300049581 Bacteria 13580
241 Ga0501071_0273154 3300049587 Bacteria 1278
242 Ga0501044_0277433 3300049823 Bacteria 1611
243 nmdc:mga0yw44_89241_c1 3300050492 Bacteria 1945
244 nmdc:mga05p37_217471_c1 3300050507 Bacteria 2307
245 nmdc:mga05p37_345942_c1 3300050507 Bacteria 1752
246 nmdc:mga05p37_68646_c1 3300050507 Bacteria 4359
247 nmdc:mga0qj67_59469_c1 3300050509 Bacteria 3030
248 nmdc:mga06r32_313243_c1 3300050510 Bacteria 1555
249 nmdc:mga06r32_536200_c1 3300050510 Bacteria 1145
250 nmdc:mga08y16_38415_c1 3300050511 Bacteria 5027
251 nmdc:mga0n895_60217_c1 3300050512 Bacteria 3746
252 nmdc:mga0a205_245842_c1 3300050515 Bacteria 1669
253 nmdc:mga0a205_30385_c1 3300050515 Bacteria 5172
254 Ga0500572_000637 3300053111 Bacteria 11626
255 Ga0500559_0000226 3300053136 Bacteria 45182
256 Ga0500568_0030702 3300053139 Bacteria 2223
257 Ga0500636_0047624 3300053177 Bacteria 2525
258 Ga0500636_0164359 3300053177 Bacteria 1207
259 2901302651 2901300506 Bacteria 8463898
260 2501076202 2501025501 Bacteria 7768574
261 2511105280 2510917015 Bacteria 7950052
262 2513556594 2513237082 Bacteria 8640282
263 2513566279 2513237083 Bacteria 8410967
264 2514048370 2513237166 Bacteria 10373764
265 2515679949 2515154122 Bacteria 8609520
266 2527076721 2526164713 Bacteria 6780608
267 2644001440 2643221598 Bacteria 4578346
268 2792835126 2791355137 Bacteria 9654227
269 2879103327 2879099564 Bacteria 10442239
270 2885277980 2885270888 Bacteria 9831543
271 2902690362 2902682994 Bacteria 8951596
272 2904488783 2904483920 Bacteria 7545285
273 2904623140 2904615490 Bacteria 10047340
274 2904693984 2904690495 Bacteria 9412302
275 2906635949 2906635258 Bacteria 8601019
276 2906663953 2906660503 Bacteria 8595048
277 2908764657 2908756301 Bacteria 8864324
278 2919529392 2919527303 Bacteria 7718827
279 642596346 642555112 Bacteria 8676562
280 8003962607 8003955200 Bacteria 8601927
281 8055268666 8055266321 Bacteria 7999742
282 8055302673 8055301274 Bacteria 8587385
283 JGI24739J22299_10017417
284 JGI24735J21928_10000156
285 JGI24735J21928_10002206
286 JGI25156J39149_1000608
287 JGI25156J39149_1001999
288 JGI25165J46597_1000998
289 Ga0055533_1000111
290 Ga0055533_1000438
291 Ga0055532_1000026
292 Ga0055527_1000018
293 Ga0055535_1000020
294 Ga0055542_1000031
295 Ga0055529_1000036
296 Ga0070683_100393795
297 Ga0070666_10234737
298 Ga0070680_100002405
299 Ga0070671_100003404
300 Ga0070674_100011003
301 Ga0070667_100024423
302 Ga0070667_100407455
303 Ga0070709_10119419
304 Ga0070714_100129377
305 Ga0070705_100204307
306 Ga0070694_100038516
307 Ga0070694_100122733
308 Ga0070708_100113701
309 Ga0070663_100222568
310 Ga0070698_100087181
311 Ga0070698_100370899
312 Ga0070698_100436531
313 Ga0070699_100001179
314 Ga0070697_100031214
315 Ga0070697_100098416
316 Ga0070672_100044770
317 Ga0070686_100080389
318 Ga0070704_100064704
319 Ga0068855_100078165
320 Ga0068857_100109419
321 Ga0070702_100096504
322 Ga0068858_100209337
323 Ga0068860_100175268
324 Ga0081540_1005313
325 Ga0070716_100027739
326 Ga0075428_100012962
327 Ga0075428_100117470
328 Ga0075430_100067530
329 Ga0075431_100208698
330 Ga0075429_100098908
331 Ga0075435_100370829
332 Ga0099794_10068953
333 Ga0105251_10000167
334 Ga0105240_10372590
335 Ga0111539_10005500
336 Ga0111539_10211442
337 Ga0114129_10098035
338 Ga0114129_10174232
339 Ga0114129_10519975
340 Ga0105243_10266237
341 Ga0105248_10036563
342 Ga0105238_10041064
343 Ga0105249_10320708
344 Ga0157370_10098911
345 Ga0157369_10101958
346 Ga0157369_10157914
347 Ga0157369_10261304
348 Ga0157378_10053753
349 Ga0163162_10114451
350 Ga0157375_10304296
351 Ga0157379_10051250
352 Ga0157379_10262325
353 Ga0213872_10045563
354 Ga0213874_10017366
355 Ga0213876_10062271
356 Ga0209674_100014
357 Ga0209674_100020
358 Ga0209672_100013
359 Ga0209147_100013
360 Ga0207427_102110
361 Ga0209258_100016
362 Ga0209258_101162
363 Ga0209148_1000020
364 Ga0209759_1000010
365 Ga0209759_1000083
366 Ga0209759_1004933
367 Ga0209233_1000153
368 Ga0209455_1000017
369 Ga0207426_1006989
370 Ga0207713_1000353
371 Ga0207647_10000602
372 Ga0207647_10017601
373 Ga0207685_10005741
374 Ga0207699_10184209
375 Ga0207646_10193918
376 Ga0207694_10145366
377 Ga0207664_10111919
378 Ga0207670_10091872
379 Ga0207669_10013892
380 Ga0207665_10096992
381 Ga0207691_10021023
382 Ga0207711_10018306
383 Ga0207711_10041402
384 Ga0207703_10093082
385 Ga0207678_10131432
386 Ga0207641_10003108
387 Ga0207674_10121376
388 Ga0209371_1008575
389 Ga0209588_1024643
390 Ga0268264_10090103
391 Ga0268256_1008968
392 Ga0265325_10001430
393 Ga0265331_10007450
394 Ga0265313_10006219
395 Ga0307508_10049720
396 Ga0265314_10113299
397 Ga0265342_10136460
398 Ga0307516_10006497
399 Ga0307412_10202141
400 Ga0373937_0017185
401 Ga0395900_0202266
402 Ga0395905_0000029
403 Ga0395905_0099474
404 Ga0395905_0116913
405 Ga0436364_0610382
406 Ga0436364_0694223
407 Ga0436364_0812430
408 Ga0436365_1013878
409 Ga0436365_1761497
410 Ga0436360_0013144
411 Ga0436361_0187505
412 Ga0436361_0204163
413 Ga0436361_1216709
414 Ga0436363_0659157
415 Ga0436362_1114585
416 Ga0466969_0059766
417 Ga0466966_0104427
418 Ga0466966_0186541
419 Ga0466961_0002467
420 Ga0466963_0048644
421 Ga0466957_0011555
422 Ga0466958_0153383
423 Ga0466967_0016259
424 Ga0495603_0002931
425 Ga0495590_0002458
426 Ga0495629_0013638
427 Ga0495629_0034442
428 Ga0495651_0188762
429 Ga0495653_0130133
430 Ga0495650_0001210
431 Ga0495650_0061594
432 Ga0495580_0000910
433 Ga0495580_0004700
434 Ga0495580_0024792
435 Ga0495582_0008325
436 Ga0495605_0104749
437 Ga0495639_0022319
438 Ga0495664_0189076
439 Ga0495585_0029835
440 Ga0495594_0036840
441 Ga0495596_0033067
442 Ga0495583_0086845
443 Ga0495606_0004880
444 Ga0495606_0148820
445 Ga0495618_0004977
446 Ga0495620_0035718
447 Ga0495628_0005598
448 Ga0495628_0253069
449 Ga0495666_0000886
450 Ga0495642_0004883
451 Ga0495642_0090051
452 Ga0495652_0153361
453 Ga0495654_0065889
454 Ga0495665_0114939
455 Ga0495586_0202021
456 Ga0495597_0005561
457 Ga0495645_0009414
458 Ga0495622_0023678
459 Ga0495667_0081196
460 Ga0495667_0182945
461 Ga0495635_0032803
462 Ga0495588_0065714
463 Ga0495588_0125542
464 Ga0495657_0151092
465 Ga0495613_0013141
466 Ga0495613_0069265
467 Ga0495649_0026946
468 Ga0495589_0005150
469 Ga0495589_0052642
470 Ga0495600_0114714
471 Ga0495581_0006826
472 Ga0495604_0002460
473 Ga0495604_0016302
474 Ga0495604_0066330
475 Ga0495604_0232515
476 Ga0495674_0146202
477 Ga0495680_0011226
478 Ga0495680_0218207
479 Ga0495683_0000623
480 Ga0495683_0004017
481 Ga0495687_007946
482 Ga0495687_038274
483 Ga0495675_0011575
484 Ga0495675_0047391
485 Ga0495675_0071122
486 Ga0495684_0023636
487 Ga0495593_0020019
488 Ga0495593_0032835
489 Ga0495602_0023411
490 Ga0495602_0065627
491 Ga0496100_0007823
492 Ga0496100_0050241
493 Ga0496101_0005003
494 Ga0496101_0182933
495 Ga0496102_0000258
496 Ga0496102_0031815
497 Ga0496103_0000326
498 Ga0496104_0028830
499 Ga0496106_0003588
500 Ga0496107_0001254
501 Ga0496109_0148061
502 Ga0496110_0008899
503 Ga0496111_0001957
504 Ga0496113_0000927
505 Ga0496113_0094800
506 Ga0496114_0000981
507 Ga0496115_0000379
508 Ga0496115_0009720
509 Ga0496115_0069760
510 Ga0496116_0009602
511 Ga0496117_0007366
512 Ga0496118_0004498
513 Ga0496121_0004621
514 Ga0496121_0039550
515 Ga0496122_0001672
516 Ga0496122_0037503
517 Ga0496123_0009691
518 Ga0496124_0004052
519 Ga0496125_0004681
520 Ga0496126_0000073
521 Ga0496126_0005843
522 Ga0501047_0004185
523 Ga0501071_0273154
524 Ga0501044_0277433
525 nmdc:mga0yw44_89241_c1
526 nmdc:mga05p37_217471_c1
527 nmdc:mga05p37_345942_c1
528 nmdc:mga05p37_68646_c1
529 nmdc:mga0qj67_59469_c1
530 nmdc:mga06r32_313243_c1
531 nmdc:mga06r32_536200_c1
532 nmdc:mga08y16_38415_c1
533 nmdc:mga0n895_60217_c1
534 nmdc:mga0a205_245842_c1
535 nmdc:mga0a205_30385_c1
536 Ga0500572_000637
537 Ga0500559_0000226
538 Ga0500568_0030702
539 Ga0500636_0047624
540 Ga0500636_0164359
541 2901302651
542 2501076202
543 2511105280
544 2513556594
545 2513566279
546 2514048370
547 2515679949
548 2527076721
549 2644001440
550 2792835126
551 2879103327
552 2885277980
553 2902690362
554 2904488783
555 2904623140
556 2904693984
557 2906635949
558 2906663953
559 2908764657
560 2919529392
561 642596346
562 8003962607
563 8055268666
564 8055302673

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00891

Methyltransf_2

O-methyltransferase domain

146

355

0.96

PF08100

Dimerisation

Dimerisation domain

39

125

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8tjj-assembly1.cif.gz_A sam-dependent methyltransferase redm bound to sam 0.9633 12 343
8tjj-assembly1.cif.gz_A sam-dependent methyltransferase redm bound to sam 0.9604 12 343
8tjk-assembly1.cif.gz_B sam-dependent methyltransferase redm bound to sah 0.943 12 343
8tji-assembly1.cif.gz_A sam-dependent methyltransferase redm, apo 0.9429 12 343
8tjk-assembly1.cif.gz_B sam-dependent methyltransferase redm bound to sah 0.9401 12 343
ID Description Score Start End Superfamily
af_O53764_91_339_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9727 97 343 3.40.50.150
af_O53764_1_85_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.968 11 88 1.10.10.10
af_O53764_91_339_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9613 97 343 3.40.50.150
af_B3GSH5_14_95_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9484 16 94 1.10.10.10
6clwA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.921 159 342 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A7W0QN85-F1-model_v4 Methyltransferase 0.989 250 343 GO:0008171
GO:0032259
AF-A0A7W0QN85-F1-model_v4 Methyltransferase 0.9787 250 343 GO:0008171
GO:0032259
AF-A0A7Z7IQ35-F1-model_v4 3-hydroxy-5-methyl-1-naphthoate 3-O-methyltransferase (EC 2.1.1.302) 0.9746 14 343 GO:0008171
GO:0032259
AF-A0A3M0ZBX7-F1-model_v4 Methyltransferase domain-containing protein 0.9497 152 342 GO:0008171
GO:0032259
AF-A0A7Y3CGT0-F1-model_v4 SAM-dependent methyltransferase 0.949 177 343 GO:0008171
GO:0032259

Map