F385272

General Info

Members Datasets Scaffolds Average Seq Length
282 231 564 401

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2852677369|2852678291
Length 472
Sequence EDTSETHQPEAGAGGGILSGIRVLDCSIAMAGPFAAQRLGDLGADVIKVEPPAGEWQRHAPAGGANGNEINVSFLSLNRNKRSIALDLKSDDGRQVLRELVATSDVFLQNYRPGVAARLGVDYETLRAINPSIVYVSVSGYGEDGPYRMRPGQDLLLQAMSGAMLSTGRDGEPPQAAGQYLVDAVTASTAFEGVLAALFHRERTGEGQLVTVNMLDAITTLQMQELSVFTAGGVPQQRSAEPHAHVYIRSPYGSFATSDGFIVLAMPDLEELGRTIGEDSFIGLDTLDDSWRLRDEVFAKTAARLATNTSAHWLDAFSKTSIWAGPVYGYADLVADPQIAHNGTFVEYEHPTEGLVKTPGFPYKFSKTPARIDRGAPLTGEHTREILSELGHAAAHIEELAERGAIAVHATLDNVREQLGGAVSADGTALPGGSDAVLPGEGAPEPAAASTARLDASPGAHAANVGASAERS

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
105 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
111 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
112 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
113 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
114 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
115 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
116 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
119 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
120 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
121 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
122 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
126 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
127 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
128 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
129 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
130 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
136 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
161 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
166 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
174 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
177 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
180 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
181 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
182 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
183 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
184 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
185 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
186 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
187 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
188 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
189 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
190 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
191 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
192 2643221569 Achromobacter sp. Root565 Isolate Unclassified
193 2643221572 Leifsonia sp. Root60 Isolate Unclassified
194 2643221594 Achromobacter sp. Root170 Isolate Unclassified
195 2643221597 Microbacterium sp. Root180 Isolate Unclassified
196 2643221649 Leifsonia sp. Root4 Isolate Unclassified
197 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
198 2738541277 Variovorax sp. GV051 Isolate Unclassified
199 2738543019 Variovorax sp. GV040 Isolate Unclassified
200 2773857759 Microbacterium sp. 1294 Isolate Unclassified
201 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
202 2808606372 Agromyces sp. 23-23 Isolate Unclassified
203 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
204 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
205 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
206 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
207 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
208 2818991435 Caulobacter henricii 536 Isolate Unclassified
209 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
210 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
211 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
212 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
213 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
214 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
215 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
216 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
217 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
218 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
219 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
220 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
221 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
222 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
223 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
224 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
225 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
226 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
227 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
228 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
229 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
230 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
231 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.69
Metatranscriptomes 0
Isolates 16.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.38
Nodule 0
Rhizoplane 3.55
Rhizosphere 76.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10043701 3300001989 Bacteria 1480
2 JGI25153J46596_10028897 3300003215 Bacteria 1913
3 Ga0055531_10000610 3300003794 Bacteria 30977
4 Ga0070676_10010594 3300005328 Bacteria 5002
5 Ga0070683_100002951 3300005329 Bacteria 13640
6 Ga0070670_100000576 3300005331 Bacteria 29012
7 Ga0070670_100016958 3300005331 Bacteria 6252
8 Ga0070666_10036913 3300005335 Bacteria 3246
9 Ga0070666_10037943 3300005335 Bacteria 3205
10 Ga0070680_100049985 3300005336 Bacteria 3410
11 Ga0068868_100000364 3300005338 Bacteria 30750
12 Ga0068868_100117952 3300005338 Bacteria 2162
13 Ga0070689_100053113 3300005340 Bacteria 3135
14 Ga0070661_100009597 3300005344 Bacteria 6704
15 Ga0070675_100000273 3300005354 Bacteria 34114
16 Ga0070671_100000473 3300005355 Bacteria 28021
17 Ga0070673_100000715 3300005364 Bacteria 18341
18 Ga0070667_100052198 3300005367 Bacteria 3449
19 Ga0070710_10022281 3300005437 Bacteria 3311
20 Ga0070700_100066596 3300005441 Bacteria 2286
21 Ga0070678_100002452 3300005456 Bacteria 10163
22 Ga0070678_100033205 3300005456 Bacteria 3580
23 Ga0068867_100038991 3300005459 Bacteria 3461
24 Ga0070685_10061485 3300005466 Bacteria 2199
25 Ga0070684_100024838 3300005535 Bacteria 5030
26 Ga0068853_100145566 3300005539 Bacteria 2129
27 Ga0070672_100000426 3300005543 Bacteria 24612
28 Ga0070665_100005166 3300005548 Bacteria 13509
29 Ga0068855_100336635 3300005563 Bacteria 1665
30 Ga0070664_100000631 3300005564 Bacteria 27005
31 Ga0070664_100146154 3300005564 Bacteria 2085
32 Ga0068857_100047714 3300005577 Bacteria 3803
33 Ga0068854_100000999 3300005578 Bacteria 17043
34 Ga0068854_100187761 3300005578 Bacteria 1618
35 Ga0068856_100056091 3300005614 Bacteria 3888
36 Ga0070702_100011292 3300005615 Bacteria 4437
37 Ga0068852_100000550 3300005616 Bacteria 24593
38 Ga0068859_100111672 3300005617 Bacteria 2796
39 Ga0068864_100072314 3300005618 Bacteria 3005
40 Ga0068864_100256866 3300005618 Bacteria 1624
41 Ga0068866_10019089 3300005718 Bacteria 3114
42 Ga0068851_10001770 3300005834 Bacteria 9433
43 Ga0068863_100003967 3300005841 Bacteria 14616
44 Ga0068860_100000536 3300005843 Bacteria 46390
45 Ga0068862_100035397 3300005844 Bacteria 4229
46 Ga0081539_10014851 3300005985 Bacteria 5719
47 Ga0097621_100000564 3300006237 Bacteria 26020
48 Ga0068871_100002293 3300006358 Bacteria 13028
49 Ga0075430_100003472 3300006846 Bacteria 13180
50 Ga0075431_100034226 3300006847 Bacteria 5234
51 Ga0068865_100127018 3300006881 Bacteria 1905
52 Ga0097620_100111664 3300006931 Bacteria 2796
53 Ga0105240_10030016 3300009093 Bacteria 7073
54 Ga0105240_10105691 3300009093 Bacteria 3417
55 Ga0111539_10219507 3300009094 Bacteria 2215
56 Ga0105243_10017091 3300009148 Bacteria 5486
57 Ga0105237_10018220 3300009545 Bacteria 7265
58 Ga0105238_10000376 3300009551 Bacteria 47943
59 Ga0105238_10015243 3300009551 Bacteria 7782
60 Ga0105249_10024598 3300009553 Bacteria 5413
61 Ga0105239_10032071 3300010375 Bacteria 5773
62 Ga0157374_10001097 3300013296 Bacteria 23308
63 Ga0157378_10002930 3300013297 Bacteria 15181
64 Ga0157378_10070540 3300013297 Bacteria 3138
65 Ga0163162_10003432 3300013306 Bacteria 15127
66 Ga0157375_10001460 3300013308 Bacteria 20335
67 Ga0157375_10389796 3300013308 Bacteria 1560
68 Ga0163163_10028902 3300014325 Bacteria 5329
69 Ga0182008_10110430 3300014497 Bacteria 1363
70 Ga0157379_10057471 3300014968 Bacteria 3477
71 Ga0157376_10000829 3300014969 Bacteria 20243
72 Ga0157376_10027114 3300014969 Bacteria 4537
73 Ga0157376_10058766 3300014969 Bacteria 3222
74 Ga0163161_10067952 3300017792 Bacteria 2603
75 Ga0163161_10085056 3300017792 Bacteria 2333
76 Ga0207666_1007041 3300025271 Bacteria 1472
77 Ga0209758_1000571 3300025297 Bacteria 57774
78 Ga0209050_1002036 3300025298 Bacteria 18705
79 Ga0209051_1023894 3300025303 Bacteria 2530
80 Ga0209257_1002211 3300025304 Bacteria 20060
81 Ga0207656_10006986 3300025321 Bacteria 4096
82 Ga0207682_10003108 3300025893 Bacteria 7273
83 Ga0207680_10033002 3300025903 Bacteria 2949
84 Ga0207680_10044971 3300025903 Bacteria 2600
85 Ga0207647_10003356 3300025904 Bacteria 12009
86 Ga0207645_10005738 3300025907 Bacteria 8957
87 Ga0207645_10016987 3300025907 Bacteria 4808
88 Ga0207705_10081299 3300025909 Bacteria 2362
89 Ga0207695_10308225 3300025913 Bacteria 1473
90 Ga0207671_10085579 3300025914 Bacteria 2369
91 Ga0207660_10074736 3300025917 Bacteria 2474
92 Ga0207662_10039957 3300025918 Bacteria 2755
93 Ga0207649_10001558 3300025920 Bacteria 13412
94 Ga0207694_10000019 3300025924 Bacteria 312382
95 Ga0207694_10024801 3300025924 Bacteria 4555
96 Ga0207650_10003120 3300025925 Bacteria 11419
97 Ga0207650_10015323 3300025925 Bacteria 5337
98 Ga0207659_10001321 3300025926 Bacteria 14813
99 Ga0207644_10001543 3300025931 Bacteria 14844
100 Ga0207644_10105026 3300025931 Bacteria 2127
101 Ga0207706_10182400 3300025933 Bacteria 1843
102 Ga0207709_10044232 3300025935 Bacteria 2689
103 Ga0207670_10048566 3300025936 Bacteria 2833
104 Ga0207704_10100349 3300025938 Bacteria 1928
105 Ga0207691_10000932 3300025940 Bacteria 29045
106 Ga0207661_10001447 3300025944 Bacteria 16013
107 Ga0207679_10002049 3300025945 Bacteria 12509
108 Ga0207679_10187914 3300025945 Bacteria 1715
109 Ga0207651_10013464 3300025960 Bacteria 4682
110 Ga0207712_10024320 3300025961 Bacteria 4009
111 Ga0207712_10088933 3300025961 Bacteria 2269
112 Ga0207640_10002704 3300025981 Bacteria 9486
113 Ga0207640_10097172 3300025981 Bacteria 2055
114 Ga0207677_10001158 3300026023 Bacteria 14398
115 Ga0207708_10070707 3300026075 Bacteria 2672
116 Ga0207702_10064687 3300026078 Bacteria 3130
117 Ga0207641_10000785 3300026088 Bacteria 33910
118 Ga0207641_10048314 3300026088 Bacteria 3591
119 Ga0207648_10018125 3300026089 Bacteria 6377
120 Ga0207676_10021491 3300026095 Bacteria 4734
121 Ga0207676_10224006 3300026095 Bacteria 1677
122 Ga0207674_10066926 3300026116 Bacteria 3617
123 Ga0207683_10000347 3300026121 Bacteria 42208
124 Ga0207683_10039061 3300026121 Bacteria 4140
125 Ga0207698_10001127 3300026142 Bacteria 15561
126 Ga0268266_10002386 3300028379 Bacteria 20296
127 Ga0268265_10029014 3300028380 Bacteria 3967
128 Ga0268264_10000521 3300028381 Bacteria 48744
129 Ga0265332_10000764 3300031238 Bacteria 19763
130 Ga0265328_10001330 3300031239 Bacteria 11406
131 Ga0265331_10005210 3300031250 Bacteria 7884
132 Ga0265314_10002897 3300031711 Bacteria 17030
133 Ga0307412_10095760 3300031911 Bacteria 2088
134 Ga0307416_100180487 3300032002 Bacteria 1978
135 Ga0307510_10000008 3300033180 Bacteria 433990
136 Ga0439436_0024865 3300041404 Bacteria 1765
137 Ga0439461_0000725 3300041410 Bacteria 4803
138 Ga0439457_007059 3300042014 Bacteria 2710
139 Ga0439462_0002243 3300042015 Bacteria 4462
140 Ga0439446_0002828 3300042156 Bacteria 4220
141 Ga0439434_0008439 3300042435 Bacteria 3020
142 Ga0466965_0011853 3300044683 Bacteria 4092
143 Ga0466960_0046849 3300044901 Bacteria 2071
144 Ga0495603_0000443 3300046455 Bacteria 22692
145 Ga0495603_0005431 3300046455 Bacteria 7609
146 Ga0495629_0001226 3300046459 Bacteria 20132
147 Ga0495629_0007028 3300046459 Bacteria 8294
148 Ga0495650_0001825 3300046471 Bacteria 19103
149 Ga0495605_0011852 3300046474 Bacteria 4851
150 Ga0495594_0002693 3300046499 Bacteria 9223
151 Ga0495594_0077285 3300046499 Bacteria 1857
152 Ga0495606_0044290 3300046507 Bacteria 2961
153 Ga0495610_0000019 3300046512 Bacteria 351524
154 Ga0495632_0000844 3300046519 Bacteria 27026
155 Ga0495642_0057966 3300046528 Bacteria 1603
156 Ga0495622_0024999 3300046557 Bacteria 2789
157 Ga0495656_0001933 3300046615 Bacteria 6836
158 Ga0495588_0000985 3300046674 Bacteria 12447
159 Ga0495613_0007301 3300046689 Bacteria 8232
160 Ga0495676_0000546 3300047321 Bacteria 30919
161 Ga0495676_0003286 3300047321 Bacteria 14611
162 Ga0495687_033874 3300047443 Bacteria 2313
163 Ga0495686_0002742 3300047472 Bacteria 16101
164 Ga0495614_0000247 3300048089 Bacteria 21181
165 Ga0495615_0000200 3300048090 Bacteria 14054
166 Ga0496101_0046609 3300048904 Bacteria 3109
167 Ga0496104_0069640 3300048907 Bacteria 3344
168 Ga0496104_0255499 3300048907 Bacteria 1665
169 Ga0496104_0312595 3300048907 Bacteria 1484
170 Ga0496108_0002435 3300048911 Bacteria 14871
171 Ga0496109_0003411 3300048912 Bacteria 13296
172 Ga0496110_0000699 3300048913 Bacteria 23154
173 Ga0496114_0040603 3300048917 Bacteria 3852
174 Ga0496114_0178377 3300048917 Bacteria 1854
175 Ga0496116_0030815 3300048919 Bacteria 3848
176 Ga0496119_0049247 3300048922 Bacteria 2607
177 Ga0496122_0004130 3300048925 Bacteria 18363
178 Ga0496122_0006362 3300048925 Bacteria 13583
179 Ga0496122_0117650 3300048925 Bacteria 1724
180 Ga0496123_0002858 3300048926 Bacteria 20366
181 Ga0496124_0012214 3300048927 Bacteria 8496
182 Ga0496125_0002647 3300048928 Bacteria 22880
183 Ga0496125_0002967 3300048928 Bacteria 21335
184 Ga0496125_0015143 3300048928 Bacteria 7473
185 Ga0496126_0040908 3300048929 Bacteria 4294
186 Ga0496126_0065338 3300048929 Bacteria 3256
187 Ga0501033_0036746 3300049570 Bacteria 3669
188 Ga0501034_0007433 3300049571 Bacteria 11662
189 Ga0501034_0066033 3300049571 Bacteria 3631
190 Ga0501036_0079113 3300049572 Bacteria 2781
191 Ga0501037_0103951 3300049573 Bacteria 2048
192 Ga0501038_0032412 3300049574 Bacteria 4610
193 Ga0501039_0019342 3300049575 Bacteria 5219
194 Ga0501040_0017137 3300049576 Bacteria 4808
195 Ga0501043_0017204 3300049579 Bacteria 5671
196 Ga0501043_0065345 3300049579 Bacteria 2857
197 Ga0501046_0029859 3300049580 Bacteria 4429
198 Ga0501047_0003933 3300049581 Bacteria 13963
199 Ga0501067_0003711 3300049583 Bacteria 8416
200 Ga0501068_0119263 3300049584 Bacteria 1644
201 Ga0501072_0010390 3300049588 Bacteria 7093
202 Ga0501073_0002362 3300049589 Bacteria 14126
203 Ga0501074_0002618 3300049590 Bacteria 12593
204 Ga0501074_0128266 3300049590 Bacteria 1815
205 Ga0501074_0189161 3300049590 Bacteria 1468
206 Ga0501076_0002727 3300049592 Bacteria 12216
207 Ga0501077_0032637 3300049593 Bacteria 3314
208 Ga0501079_0005770 3300049741 Bacteria 9256
209 Ga0501080_0003800 3300049742 Bacteria 13339
210 Ga0501080_0012759 3300049742 Bacteria 7708
211 Ga0501080_0033416 3300049742 Bacteria 4800
212 Ga0501081_0000560 3300049743 Bacteria 21149
213 Ga0501083_0002419 3300049744 Bacteria 12762
214 Ga0501035_0043413 3300049822 Bacteria 4052
215 Ga0501035_0045308 3300049822 Bacteria 3957
216 Ga0501044_0063977 3300049823 Bacteria 3756
217 Ga0501044_0227177 3300049823 Bacteria 1816
218 nmdc:mga00v17_49621_c1 3300050491 Bacteria 2547
219 nmdc:mga0qj67_163233_c1 3300050509 Bacteria 1808
220 nmdc:mga0qj67_81007_c1 3300050509 Bacteria 2602
221 nmdc:mga06r32_117663_c1 3300050510 Bacteria 2619
222 nmdc:mga06r32_524419_c1 3300050510 Bacteria 1160
223 Ga0500643_003610 3300053087 Bacteria 7348
224 Ga0500658_0025076 3300053134 Bacteria 2290
225 Ga0500559_0000405 3300053136 Bacteria 31024
226 Ga0500559_0001297 3300053136 Bacteria 14433
227 Ga0500573_0009388 3300053140 Bacteria 5426
228 Ga0500577_0001083 3300053142 Bacteria 7006
229 Ga0500588_0006894 3300053146 Bacteria 2599
230 Ga0500616_0000010 3300053153 Bacteria 761410
231 Ga0500622_0001692 3300053156 Bacteria 17162
232 Ga0500622_0009894 3300053156 Bacteria 5261
233 Ga0500636_0001131 3300053177 Bacteria 14293
234 Ga0501084_0003560 3300054114 Bacteria 12646
235 Ga0501082_0006403 3300060353 Bacteria 10214
236 Ga0501082_0007135 3300060353 Bacteria 9631
237 2852678291 2852677369 Bacteria 3768884
238 2585153545 2582581280 Bacteria 5994497
239 2585197349 2582581293 Bacteria 5907401
240 2599904303 2599185292 Bacteria 6290804
241 2643780227 2643221552 Bacteria 5708754
242 2643859459 2643221569 Bacteria 6064337
243 2643877189 2643221572 Bacteria 3614809
244 2643982957 2643221594 Bacteria 5811388
245 2643997150 2643221597 Bacteria 3347721
246 2644278293 2643221649 Bacteria 3867359
247 2644384244 2643221669 Bacteria 3611286
248 2738721110 2738541277 Bacteria 7458140
249 2739280309 2738543019 Bacteria 7459457
250 2774382210 2773857759 Bacteria 2963774
251 2774396654 2773857762 Bacteria 5971770
252 2808903591 2808606372 Bacteria 4649509
253 2809033544 2808606395 Bacteria 6020352
254 2809225459 2808606447 Bacteria 3572005
255 2812349495 2811994878 Bacteria 5992952
256 2816423448 2816332119 Bacteria 8120218
257 2816503835 2816332139 Bacteria 9138787
258 2819536671 2818991435 Bacteria 5433759
259 2819645832 2818991454 Bacteria 5563326
260 2828307128 2828305725 Bacteria 4916900
261 2844853362 2844852863 Bacteria 3849151
262 2846955492 2846952575 Bacteria 6587527
263 2848299265 2848297114 Bacteria 3608511
264 2848862629 2848858292 Bacteria 7391279
265 2857726815 2857723135 Bacteria 4217853
266 2857736482 2857733635 Bacteria 3532004
267 2862996566 2862993130 Bacteria 3860849
268 2889792423 2889790730 Bacteria 5689708
269 2895662007 2895660088 Bacteria 3782833
270 2897805087 2897803580 Bacteria 7000062
271 2905930547 2905926851 Bacteria 4423176
272 2929167127 2929160207 Bacteria 9075316
273 2939662416 2939660829 Bacteria 3784848
274 2939664357 2939660829 Bacteria 3784848
275 2945970239 2945968032 Bacteria 4111363
276 2946006687 2946003308 Bacteria 3857229
277 2946791318 2946787523 Bacteria 4366789
278 2964328384 2964326757 Bacteria 3290868
279 8023626698 8023623736 Bacteria 8593882
280 8055035388 8055034563 Bacteria 3562128
281 8055040111 8055037949 Bacteria 3337834
282 8056038650 8056037122 Bacteria 3854319
283 JGI24739J22299_10043701
284 JGI25153J46596_10028897
285 Ga0055531_10000610
286 Ga0070676_10010594
287 Ga0070683_100002951
288 Ga0070670_100000576
289 Ga0070670_100016958
290 Ga0070666_10036913
291 Ga0070666_10037943
292 Ga0070680_100049985
293 Ga0068868_100000364
294 Ga0068868_100117952
295 Ga0070689_100053113
296 Ga0070661_100009597
297 Ga0070675_100000273
298 Ga0070671_100000473
299 Ga0070673_100000715
300 Ga0070667_100052198
301 Ga0070710_10022281
302 Ga0070700_100066596
303 Ga0070678_100002452
304 Ga0070678_100033205
305 Ga0068867_100038991
306 Ga0070685_10061485
307 Ga0070684_100024838
308 Ga0068853_100145566
309 Ga0070672_100000426
310 Ga0070665_100005166
311 Ga0068855_100336635
312 Ga0070664_100000631
313 Ga0070664_100146154
314 Ga0068857_100047714
315 Ga0068854_100000999
316 Ga0068854_100187761
317 Ga0068856_100056091
318 Ga0070702_100011292
319 Ga0068852_100000550
320 Ga0068859_100111672
321 Ga0068864_100072314
322 Ga0068864_100256866
323 Ga0068866_10019089
324 Ga0068851_10001770
325 Ga0068863_100003967
326 Ga0068860_100000536
327 Ga0068862_100035397
328 Ga0081539_10014851
329 Ga0097621_100000564
330 Ga0068871_100002293
331 Ga0075430_100003472
332 Ga0075431_100034226
333 Ga0068865_100127018
334 Ga0097620_100111664
335 Ga0105240_10030016
336 Ga0105240_10105691
337 Ga0111539_10219507
338 Ga0105243_10017091
339 Ga0105237_10018220
340 Ga0105238_10000376
341 Ga0105238_10015243
342 Ga0105249_10024598
343 Ga0105239_10032071
344 Ga0157374_10001097
345 Ga0157378_10002930
346 Ga0157378_10070540
347 Ga0163162_10003432
348 Ga0157375_10001460
349 Ga0157375_10389796
350 Ga0163163_10028902
351 Ga0182008_10110430
352 Ga0157379_10057471
353 Ga0157376_10000829
354 Ga0157376_10027114
355 Ga0157376_10058766
356 Ga0163161_10067952
357 Ga0163161_10085056
358 Ga0207666_1007041
359 Ga0209758_1000571
360 Ga0209050_1002036
361 Ga0209051_1023894
362 Ga0209257_1002211
363 Ga0207656_10006986
364 Ga0207682_10003108
365 Ga0207680_10033002
366 Ga0207680_10044971
367 Ga0207647_10003356
368 Ga0207645_10005738
369 Ga0207645_10016987
370 Ga0207705_10081299
371 Ga0207695_10308225
372 Ga0207671_10085579
373 Ga0207660_10074736
374 Ga0207662_10039957
375 Ga0207649_10001558
376 Ga0207694_10000019
377 Ga0207694_10024801
378 Ga0207650_10003120
379 Ga0207650_10015323
380 Ga0207659_10001321
381 Ga0207644_10001543
382 Ga0207644_10105026
383 Ga0207706_10182400
384 Ga0207709_10044232
385 Ga0207670_10048566
386 Ga0207704_10100349
387 Ga0207691_10000932
388 Ga0207661_10001447
389 Ga0207679_10002049
390 Ga0207679_10187914
391 Ga0207651_10013464
392 Ga0207712_10024320
393 Ga0207712_10088933
394 Ga0207640_10002704
395 Ga0207640_10097172
396 Ga0207677_10001158
397 Ga0207708_10070707
398 Ga0207702_10064687
399 Ga0207641_10000785
400 Ga0207641_10048314
401 Ga0207648_10018125
402 Ga0207676_10021491
403 Ga0207676_10224006
404 Ga0207674_10066926
405 Ga0207683_10000347
406 Ga0207683_10039061
407 Ga0207698_10001127
408 Ga0268266_10002386
409 Ga0268265_10029014
410 Ga0268264_10000521
411 Ga0265332_10000764
412 Ga0265328_10001330
413 Ga0265331_10005210
414 Ga0265314_10002897
415 Ga0307412_10095760
416 Ga0307416_100180487
417 Ga0307510_10000008
418 Ga0439436_0024865
419 Ga0439461_0000725
420 Ga0439457_007059
421 Ga0439462_0002243
422 Ga0439446_0002828
423 Ga0439434_0008439
424 Ga0466965_0011853
425 Ga0466960_0046849
426 Ga0495603_0000443
427 Ga0495603_0005431
428 Ga0495629_0001226
429 Ga0495629_0007028
430 Ga0495650_0001825
431 Ga0495605_0011852
432 Ga0495594_0002693
433 Ga0495594_0077285
434 Ga0495606_0044290
435 Ga0495610_0000019
436 Ga0495632_0000844
437 Ga0495642_0057966
438 Ga0495622_0024999
439 Ga0495656_0001933
440 Ga0495588_0000985
441 Ga0495613_0007301
442 Ga0495676_0000546
443 Ga0495676_0003286
444 Ga0495687_033874
445 Ga0495686_0002742
446 Ga0495614_0000247
447 Ga0495615_0000200
448 Ga0496101_0046609
449 Ga0496104_0069640
450 Ga0496104_0255499
451 Ga0496104_0312595
452 Ga0496108_0002435
453 Ga0496109_0003411
454 Ga0496110_0000699
455 Ga0496114_0040603
456 Ga0496114_0178377
457 Ga0496116_0030815
458 Ga0496119_0049247
459 Ga0496122_0004130
460 Ga0496122_0006362
461 Ga0496122_0117650
462 Ga0496123_0002858
463 Ga0496124_0012214
464 Ga0496125_0002647
465 Ga0496125_0002967
466 Ga0496125_0015143
467 Ga0496126_0040908
468 Ga0496126_0065338
469 Ga0501033_0036746
470 Ga0501034_0007433
471 Ga0501034_0066033
472 Ga0501036_0079113
473 Ga0501037_0103951
474 Ga0501038_0032412
475 Ga0501039_0019342
476 Ga0501040_0017137
477 Ga0501043_0017204
478 Ga0501043_0065345
479 Ga0501046_0029859
480 Ga0501047_0003933
481 Ga0501067_0003711
482 Ga0501068_0119263
483 Ga0501072_0010390
484 Ga0501073_0002362
485 Ga0501074_0002618
486 Ga0501074_0128266
487 Ga0501074_0189161
488 Ga0501076_0002727
489 Ga0501077_0032637
490 Ga0501079_0005770
491 Ga0501080_0003800
492 Ga0501080_0012759
493 Ga0501080_0033416
494 Ga0501081_0000560
495 Ga0501083_0002419
496 Ga0501035_0043413
497 Ga0501035_0045308
498 Ga0501044_0063977
499 Ga0501044_0227177
500 nmdc:mga00v17_49621_c1
501 nmdc:mga0qj67_163233_c1
502 nmdc:mga0qj67_81007_c1
503 nmdc:mga06r32_117663_c1
504 nmdc:mga06r32_524419_c1
505 Ga0500643_003610
506 Ga0500658_0025076
507 Ga0500559_0000405
508 Ga0500559_0001297
509 Ga0500573_0009388
510 Ga0500577_0001083
511 Ga0500588_0006894
512 Ga0500616_0000010
513 Ga0500622_0001692
514 Ga0500622_0009894
515 Ga0500636_0001131
516 Ga0501084_0003560
517 Ga0501082_0006403
518 Ga0501082_0007135
519 2852678291
520 2585153545
521 2585197349
522 2599904303
523 2643780227
524 2643859459
525 2643877189
526 2643982957
527 2643997150
528 2644278293
529 2644384244
530 2738721110
531 2739280309
532 2774382210
533 2774396654
534 2808903591
535 2809033544
536 2809225459
537 2812349495
538 2816423448
539 2816503835
540 2819536671
541 2819645832
542 2828307128
543 2844853362
544 2846955492
545 2848299265
546 2848862629
547 2857726815
548 2857736482
549 2862996566
550 2889792423
551 2895662007
552 2897805087
553 2905930547
554 2929167127
555 2939662416
556 2939664357
557 2945970239
558 2946006687
559 2946791318
560 2964328384
561 8023626698
562 8055035388
563 8055040111
564 8056038650

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

18

383

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yit-assembly3.cif.gz_E-2 crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9009 2 368
5yit-assembly1.cif.gz_A crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.8982 1 373
1pt8-assembly1.cif.gz_B crystal structure of the yfdw gene product of e. coli, in complex with oxalate and acetyl-coa 0.8963 1 391
5yit-assembly1.cif.gz_B crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.8934 1 373
2vjp-assembly1.cif.gz_B formyl-coa transferase mutant variant w48f 0.8927 1 392
ID Description Score Start End Superfamily
af_Q4V9F2_1_227_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9246 23 238 3.40.50.10540
4hl6D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9234 1 376 3.40.50.10540
4hl6D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9172 1 376 3.40.50.10540
4ed9A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9045 1 376 3.40.50.10540
af_O06543_1_217_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9011 2 228 3.40.50.10540
ID Description Score Start End GO Terms
AF-A0A263DKA8-F1-model_v4 CoA transferase 0.9633 3 393 GO:0008410
AF-A0A263DKA8-F1-model_v4 CoA transferase 0.9609 3 393 GO:0008410
AF-A0A2P8DGC6-F1-model_v4 Crotonobetainyl-CoA:carnitine CoA-transferase CaiB-like acyl-CoA transferase 0.958 2 393 GO:0008410
AF-A0A382PD49-F1-model_v4 CoA transferase 0.958 2 314 GO:0008410
AF-A0A7C6ZN15-F1-model_v4 CoA transferase 0.9571 57 392 GO:0008410

Map