F385136

General Info

Members Datasets Scaffolds Average Seq Length
282 205 213 729

Family's Representative Sequence

Representative Sequence 3300046454|Ga0495592_0007758|Ga0495592_0007758_525_2789
Length 754
Sequence VAALEDATPADIPAEAREQHARLAEQIEEHRFRYYVRDAPVVSDADFDRLLRELEALEEEHPALRTPDSPTQKVAGAYETEFTSVRHRERLLSLDNAFTDEELSTWADRVAGELGAPDNTHSPYHFLCELKVDGLAVNLTYEQGRLTRAATRGDGRTGEDITQNVRTIADIPDRLAGERVPELVEIRGEVYFPGEKFEELNARLVEGGDKPFANPRNAAAGSLRQKDPRVTATRPLRMVVHGIGAREGFAIDCQSHAYELLREWGLPTARYNKVVGSLAAVREFIAYYGEHRHDVEHEIDGVVVKVDEIPLQGRLGSTSRAPRWAIAWKYAPEEVNTRLVDVRVGVGRTGRVTPYAVVEPVTVAGSEVEFATLHNQEVVKKKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGSEREFVMPAECPECGTALQPMKEGDIDLRCPNARYCPAQLRERIFYLAGRRCLDIEALGYVAATALTQPLDAEPPVRDEGDLFGLDIERLLPIRSHVLDQDTGLPKRDPKTGEEKIVTFFANQKGEPKKNALSMLENIAAAKERPLAQVITGLSIRHVGPVAAEALAREFRDLDRIKDAEEAELAAVDGVGPTIAASLKQWFAEDWHLEIIEKWRAAGVRFTEEGSDEGPRPLEGLTVVVTGTLQAHTRDGAKEALGSRGAKVTGSVSKKTDFVVVGDNPGSKYDKAVQLKVPVLDEDGFAVLLAEGAEAARQATVNPAETEGEQPAETPDGSEGTSGTESD

Samples

Sample ID Description Type Environment
1 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
2 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
3 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
4 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
5 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
6 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
7 2643221548 Streptomyces sp. Root55 Isolate Unclassified
8 2643221578 Streptomyces sp. Root63 Isolate Unclassified
9 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
10 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
11 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
12 2643221647 Streptomyces sp. Root369 Isolate Unclassified
13 2643221670 Streptomyces sp. Root431 Isolate Unclassified
14 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
15 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
16 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
17 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
18 2643221714 Streptomyces sp. Root264 Isolate Unclassified
19 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
20 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
21 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
22 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
23 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
24 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
25 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
26 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
27 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
28 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
29 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
30 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
31 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
32 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
33 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
34 2862574272 Streptomyces sp. AcE210 Isolate Nodule
35 2867369537 Streptomyces sp. Z26 Isolate Unclassified
36 2867428634 Streptomyces sp. RP5T Isolate Unclassified
37 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
38 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
39 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
40 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
41 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
42 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
43 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
44 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
45 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
46 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
47 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
48 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
49 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
50 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
51 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
52 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
53 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
54 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
55 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
56 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
57 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
58 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
59 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
60 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
61 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
62 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
63 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
64 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
65 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
66 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
67 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
68 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
69 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
70 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
71 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
72 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
73 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
74 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
75 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
76 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
77 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
78 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
79 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
86 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
87 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
91 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
92 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
93 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
94 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
95 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
98 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
104 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
105 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
110 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
116 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
117 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
118 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
119 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
120 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
123 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
124 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
125 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
126 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
127 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
128 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
129 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
132 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
133 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
136 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
144 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
145 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
146 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
147 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
148 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
149 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
150 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
153 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
154 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
157 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
158 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
159 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
160 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
161 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
162 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
177 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
178 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
179 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
180 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
181 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
182 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
183 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
184 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
185 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
186 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
187 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
188 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
189 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
192 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
193 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
194 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
195 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
196 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
197 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
198 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
199 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
200 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
201 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
202 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
203 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
204 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
205 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.53
Metatranscriptomes 0
Isolates 24.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.32
Nodule 0.35
Rhizoplane 0
Rhizosphere 76.95
Stem 0
Stem Tuber 0
Unclassified 17.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10005585 3300003316 Bacteria 6842
2 rootH1_10009402 3300003323 Bacteria 6586
3 Ga0070671_100001260 3300005355 Bacteria 18979
4 Ga0070663_100001081 3300005455 Bacteria 14917
5 Ga0068853_100005154 3300005539 Bacteria 10213
6 Ga0075368_10012206 3300006042 Bacteria 3138
7 Ga0075363_100001832 3300006048 Bacteria 8347
8 Ga0075367_10001772 3300006178 Bacteria 9487
9 Ga0114129_10226756 3300009147 Bacteria 2518
10 Ga0105239_10013571 3300010375 Bacteria 9044
11 Ga0182008_10003491 3300014497 Bacteria 9480
12 Ga0182007_10001278 3300015262 Bacteria 13634
13 Ga0183367_1013 3300015688 Bacteria 334176
14 Ga0209758_1004298 3300025297 Bacteria 12011
15 Ga0207678_10014256 3300026067 Bacteria 6987
16 Ga0209813_10003043 3300027866 Bacteria 3895
17 Ga0207428_10048235 3300027907 Bacteria 3417
18 Ga0307517_10001603 3300028786 Bacteria 37617
19 Ga0307517_10007472 3300028786 Bacteria 15904
20 Ga0307515_10000423 3300028794 Bacteria 101947
21 Ga0307511_10067013 3300030521 Bacteria 2669
22 Ga0307511_10075633 3300030521 Bacteria 2415
23 Ga0307512_10004807 3300030522 Bacteria 14498
24 Ga0307512_10015082 3300030522 Bacteria 7181
25 Ga0265332_10023797 3300031238 Bacteria 2699
26 Ga0265316_10005867 3300031344 Bacteria 11836
27 Ga0307509_10023087 3300031507 Bacteria 6994
28 Ga0307509_10132519 3300031507 Bacteria 2444
29 Ga0307514_10007529 3300031649 Bacteria 9379
30 Ga0316575_10000007 3300031665 Bacteria 79369
31 Ga0265342_10000432 3300031712 Bacteria 45867
32 Ga0307516_10053244 3300031730 Bacteria 3958
33 Ga0307516_10084018 3300031730 Bacteria 3023
34 Ga0307518_10007723 3300031838 Bacteria 7691
35 Ga0307507_10025470 3300033179 Bacteria 6416
36 Ga0307507_10108815 3300033179 Bacteria 2276
37 Ga0307510_10008041 3300033180 Bacteria 12553
38 Ga0307510_10091520 3300033180 Bacteria 2883
39 Ga0373932_0000106 3300035112 Bacteria 22777
40 Ga0316574_0003336 3300035398 Bacteria 8264
41 Ga0316574_0057480 3300035398 Bacteria 2435
42 Ga0373931_0000010 3300035691 Bacteria 334069
43 Ga0316582_0034282 3300036647 Bacteria 3125
44 Ga0395900_0116820 3300037418 Bacteria 2738
45 Ga0395898_0000967 3300037466 Bacteria 45516
46 Ga0395898_0023813 3300037466 Bacteria 6183
47 Ga0400490_09031 3300038726 Bacteria 9306
48 Ga0400490_22530 3300038726 Bacteria 7494
49 Ga0439457_000078 3300042014 Bacteria 21545
50 Ga0439457_004558 3300042014 Bacteria 3595
51 Ga0450903_000030 3300042138 Bacteria 28715
52 Ga0466972_0001639 3300044658 Bacteria 10964
53 Ga0466963_0093253 3300044694 Bacteria 2052
54 Ga0466967_0003200 3300045976 Bacteria 10569
55 Ga0466967_0028677 3300045976 Bacteria 4650
56 Ga0495592_0007758 3300046454 Bacteria 8041
57 Ga0495592_0034872 3300046454 Bacteria 3791
58 Ga0495603_0001130 3300046455 Bacteria 15560
59 Ga0495603_0001613 3300046455 Bacteria 13249
60 Ga0495603_0007100 3300046455 Bacteria 6720
61 Ga0495603_0018777 3300046455 Bacteria 4185
62 Ga0495603_0027204 3300046455 Bacteria 3452
63 Ga0495629_0007873 3300046459 Bacteria 7842
64 Ga0495651_0001513 3300046462 Bacteria 17988
65 Ga0495580_0011823 3300046472 Bacteria 6737
66 Ga0495580_0021896 3300046472 Bacteria 4712
67 Ga0495582_0025879 3300046473 Bacteria 3215
68 Ga0495605_0008695 3300046474 Bacteria 5733
69 Ga0495639_0007196 3300046475 Bacteria 4776
70 Ga0495662_0013256 3300046476 Bacteria 4012
71 Ga0495664_0012710 3300046477 Bacteria 4768
72 Ga0495585_0033814 3300046492 Bacteria 2892
73 Ga0495594_0000462 3300046499 Bacteria 20712
74 Ga0495594_0015635 3300046499 Bacteria 3989
75 Ga0495606_0033927 3300046507 Bacteria 3511
76 Ga0495608_0008222 3300046511 Bacteria 7326
77 Ga0495616_0023511 3300046513 Bacteria 3315
78 Ga0495620_0019351 3300046515 Bacteria 3350
79 Ga0495628_0009865 3300046516 Bacteria 8135
80 Ga0495628_0016193 3300046516 Bacteria 6220
81 Ga0495630_0044607 3300046517 Bacteria 3313
82 Ga0495632_0028469 3300046519 Bacteria 2916
83 Ga0495643_0011019 3300046522 Bacteria 5530
84 Ga0495666_0008857 3300046526 Bacteria 5041
85 Ga0495652_0046546 3300046529 Bacteria 3723
86 Ga0495665_0010468 3300046531 Bacteria 5019
87 Ga0495640_0000204 3300046533 Bacteria 39439
88 Ga0495640_0001693 3300046533 Bacteria 17475
89 Ga0495640_0020846 3300046533 Bacteria 4817
90 Ga0495597_0030014 3300046542 Bacteria 2479
91 Ga0495645_0008566 3300046543 Bacteria 7142
92 Ga0495645_0020165 3300046543 Bacteria 4806
93 Ga0495645_0032380 3300046543 Bacteria 3814
94 Ga0495633_0013271 3300046558 Bacteria 4347
95 Ga0495668_0027291 3300046616 Bacteria 3235
96 Ga0495634_0002887 3300046642 Bacteria 14098
97 Ga0495634_0007061 3300046642 Bacteria 8472
98 Ga0495625_0016955 3300046660 Bacteria 5713
99 Ga0495625_0026962 3300046660 Bacteria 4332
100 Ga0495635_0001694 3300046663 Bacteria 14848
101 Ga0495588_0001452 3300046674 Bacteria 10161
102 Ga0495657_0003330 3300046675 Bacteria 13162
103 Ga0495657_0011851 3300046675 Bacteria 6499
104 Ga0495657_0038984 3300046675 Bacteria 3266
105 Ga0495623_0013476 3300046679 Bacteria 5301
106 Ga0495646_0000569 3300046680 Bacteria 20036
107 Ga0495646_0010302 3300046680 Bacteria 5945
108 Ga0495613_0001019 3300046689 Bacteria 21310
109 Ga0495613_0001219 3300046689 Bacteria 19659
110 Ga0495613_0007687 3300046689 Bacteria 8020
111 Ga0495613_0008324 3300046689 Bacteria 7700
112 Ga0495649_0022645 3300046694 Bacteria 3515
113 Ga0495589_0005596 3300046794 Bacteria 6626
114 Ga0495589_0017289 3300046794 Bacteria 3702
115 Ga0495600_0005553 3300046809 Bacteria 7611
116 Ga0495581_0001763 3300047315 Bacteria 12076
117 Ga0495581_0030733 3300047315 Bacteria 3111
118 Ga0495604_0002998 3300047317 Bacteria 13511
119 Ga0495604_0003576 3300047317 Bacteria 12389
120 Ga0495604_0010751 3300047317 Bacteria 7267
121 Ga0495636_0003259 3300047318 Bacteria 6290
122 Ga0495636_0003391 3300047318 Bacteria 6179
123 Ga0495674_0041107 3300047319 Bacteria 4132
124 Ga0495674_0054433 3300047319 Bacteria 3514
125 Ga0495676_0010966 3300047321 Bacteria 8194
126 Ga0495676_0014190 3300047321 Bacteria 7132
127 Ga0495676_0014861 3300047321 Bacteria 6950
128 Ga0495676_0016270 3300047321 Bacteria 6604
129 Ga0495676_0029952 3300047321 Bacteria 4626
130 Ga0495676_0038154 3300047321 Bacteria 3992
131 Ga0495676_0080129 3300047321 Bacteria 2480
132 Ga0495683_0027723 3300047323 Bacteria 2896
133 Ga0495687_015941 3300047443 Bacteria 3796
134 Ga0495687_038910 3300047443 Bacteria 2107
135 Ga0495675_0011863 3300047444 Bacteria 5477
136 Ga0495675_0013612 3300047444 Bacteria 5140
137 Ga0495675_0018514 3300047444 Bacteria 4421
138 Ga0495685_002366 3300047447 Bacteria 5902
139 Ga0495685_003038 3300047447 Bacteria 5317
140 Ga0495681_0000229 3300047470 Bacteria 46641
141 Ga0495686_0008118 3300047472 Bacteria 7763
142 Ga0495602_0035303 3300048088 Bacteria 4664
143 Ga0495602_0044205 3300048088 Bacteria 4043
144 Ga0495614_0000547 3300048089 Bacteria 15554
145 Ga0495614_0010134 3300048089 Bacteria 4159
146 Ga0495626_0007937 3300048091 Bacteria 5870
147 Ga0501031_0001454 3300049568 Bacteria 14701
148 Ga0501032_0016709 3300049569 Bacteria 5155
149 Ga0501032_0016824 3300049569 Bacteria 5138
150 Ga0501032_0027404 3300049569 Bacteria 3915
151 Ga0501033_0004199 3300049570 Bacteria 11594
152 Ga0501033_0017986 3300049570 Bacteria 5336
153 Ga0501033_0023895 3300049570 Bacteria 4610
154 Ga0501034_0021859 3300049571 Bacteria 6518
155 Ga0501034_0031890 3300049571 Bacteria 5353
156 Ga0501036_0000892 3300049572 Bacteria 22310
157 Ga0501036_0003870 3300049572 Bacteria 12006
158 Ga0501036_0023126 3300049572 Bacteria 5232
159 Ga0501036_0073319 3300049572 Bacteria 2894
160 Ga0501037_0002995 3300049573 Bacteria 12263
161 Ga0501037_0010738 3300049573 Bacteria 6729
162 Ga0501038_0005006 3300049574 Bacteria 12302
163 Ga0501038_0018356 3300049574 Bacteria 6316
164 Ga0501038_0039083 3300049574 Bacteria 4152
165 Ga0501038_0048886 3300049574 Bacteria 3659
166 Ga0501039_0002014 3300049575 Bacteria 15031
167 Ga0501039_0004659 3300049575 Bacteria 10368
168 Ga0501040_0046743 3300049576 Bacteria 2954
169 Ga0501041_0007878 3300049577 Bacteria 6259
170 Ga0501043_0002751 3300049579 Bacteria 14712
171 Ga0501043_0004044 3300049579 Bacteria 11995
172 Ga0501043_0016178 3300049579 Bacteria 5851
173 Ga0501043_0048930 3300049579 Bacteria 3323
174 Ga0501046_0002328 3300049580 Bacteria 17909
175 Ga0501047_0000029 3300049581 Bacteria 218396
176 Ga0501047_0002355 3300049581 Bacteria 18074
177 Ga0501047_0027558 3300049581 Bacteria 5473
178 Ga0501048_0015983 3300049582 Bacteria 5535
179 Ga0501067_0007498 3300049583 Bacteria 6060
180 Ga0501068_0003480 3300049584 Bacteria 8484
181 Ga0501069_0015217 3300049585 Bacteria 4122
182 Ga0501070_0002575 3300049586 Bacteria 15857
183 Ga0501070_0014895 3300049586 Bacteria 6540
184 Ga0501071_0002511 3300049587 Bacteria 11165
185 Ga0501072_0003842 3300049588 Bacteria 11351
186 Ga0501073_0056599 3300049589 Bacteria 2742
187 Ga0501074_0003155 3300049590 Bacteria 11623
188 Ga0501076_0005034 3300049592 Bacteria 9458
189 Ga0501077_0008166 3300049593 Bacteria 6470
190 Ga0501079_0002937 3300049741 Bacteria 12453
191 Ga0501079_0003884 3300049741 Bacteria 11022
192 Ga0501080_0057054 3300049742 Bacteria 3636
193 Ga0501083_0015551 3300049744 Bacteria 5327
194 Ga0501035_0003354 3300049822 Bacteria 15344
195 Ga0501035_0005501 3300049822 Bacteria 11969
196 Ga0501035_0028655 3300049822 Bacteria 5082
197 Ga0501035_0039109 3300049822 Bacteria 4294
198 Ga0501044_0002994 3300049823 Bacteria 19135
199 Ga0501044_0007200 3300049823 Bacteria 12236
200 Ga0501044_0016225 3300049823 Bacteria 8007
201 Ga0501044_0031952 3300049823 Bacteria 5535
202 Ga0501044_0121419 3300049823 Bacteria 2613
203 nmdc:mga0yw44_2580_c1 3300050492 Bacteria 7789
204 nmdc:mga06z11_3340_c1 3300050494 Bacteria 6212
205 nmdc:mga04h51_3335_c1 3300050495 Bacteria 3895
206 Ga0500566_0000211 3300053094 Bacteria 30837
207 Ga0500640_007417 3300053095 Bacteria 4264
208 Ga0500650_0019456 3300053098 Bacteria 2963
209 Ga0500553_014627 3300053101 Bacteria 3975
210 Ga0500573_0017264 3300053140 Bacteria 4108
211 Ga0500624_001279 3300053157 Bacteria 4364
212 Ga0500634_0000454 3300053161 Bacteria 13306
213 Ga0501082_0018484 3300060353 Bacteria 6004

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047443 Ga0495687_038910 Ga0495687_038910_124_2091 637
2 3300031238 Ga0265332_10023797 Ga0265332_100237973 656
3 3300031712 Ga0265342_10000432 Ga0265342_1000043217 656
4 3300044694 Ga0466963_0093253 Ga0466963_0093253_20_1996 658
5 3300035398 Ga0316574_0003336 Ga0316574_0003336_3342_5348 662
6 3300036647 Ga0316582_0034282 Ga0316582_0034282_294_2300 662
7 3300005355 Ga0070671_100001260 Ga0070671_10000126011 664
8 3300035112 Ga0373932_0000106 Ga0373932_0000106_4923_6932 664
9 3300035691 Ga0373931_0000010 Ga0373931_0000010_77941_79950 664
10 3300050492 nmdc:mga0yw44_2580_c1 nmdc:mga0yw44_2580_c1_4422_6431 664
11 3300038726 Ga0400490_22530 Ga0400490_22530_2232_4250 665
12 3300053094 Ga0500566_0000211 Ga0500566_0000211_15518_17560 665
13 3300010375 Ga0105239_10013571 Ga0105239_100135714 667
14 3300037418 Ga0395900_0116820 Ga0395900_0116820_260_2281 667
15 3300035398 Ga0316574_0057480 Ga0316574_0057480_65_2089 668
16 3300049579 Ga0501043_0048930 Ga0501043_0048930_60_2165 668
17 3300049741 Ga0501079_0002937 Ga0501079_0002937_3918_6023 668
18 3300009147 Ga0114129_10226756 Ga0114129_102267561 669
19 3300027907 Ga0207428_10048235 Ga0207428_100482352 669
20 3300038726 Ga0400490_09031 Ga0400490_09031_4534_6564 669
21 3300005455 Ga0070663_100001081 Ga0070663_1000010818 672
22 3300026067 Ga0207678_10014256 Ga0207678_100142562 672
23 3300031344 Ga0265316_10005867 Ga0265316_100058672 673
24 3300031665 Ga0316575_10000007 Ga0316575_1000000741 685
25 3300049822 Ga0501035_0005501 Ga0501035_0005501_5744_8011 708
26 3300049823 Ga0501044_0031952 Ga0501044_0031952_1153_3420 708
27 3300049569 Ga0501032_0016824 Ga0501032_0016824_2669_4900 709
28 3300049572 Ga0501036_0003870 Ga0501036_0003870_5825_8056 709
29 3300049573 Ga0501037_0010738 Ga0501037_0010738_1168_3399 709
30 3300049581 Ga0501047_0027558 Ga0501047_0027558_2790_5021 709
31 3300049586 Ga0501070_0014895 Ga0501070_0014895_162_2393 709
32 3300046543 Ga0495645_0020165 Ga0495645_0020165_810_3107 711
33 3300047444 Ga0495675_0011863 Ga0495675_0011863_1552_3849 711
34 3300005539 Ga0068853_100005154 Ga0068853_1000051546 712
35 3300028786 Ga0307517_10001603 Ga0307517_1000160318 712
36 3300053101 Ga0500553_014627 Ga0500553_014627_1600_3819 712
37 iso_pu_bacteria 3006321560 3006322691 713
38 3300047447 Ga0495685_002366 Ga0495685_002366_3310_5562 714
39 iso_pu_bacteria 2643221601 2644018074 714
40 iso_pu_bacteria 2643221631 2644176640 714
41 iso_pu_bacteria 2616644941 2616903380 715
42 iso_pu_bacteria 2818991472 2819740556 715
43 iso_pu_bacteria 2919468124 2919472368 716
44 3300046472 Ga0495580_0011823 Ga0495580_0011823_294_2513 717
45 3300046511 Ga0495608_0008222 Ga0495608_0008222_497_2716 717
46 3300046516 Ga0495628_0016193 Ga0495628_0016193_3724_5943 717
47 3300046517 Ga0495630_0044607 Ga0495630_0044607_497_2716 717
48 3300046526 Ga0495666_0008857 Ga0495666_0008857_1159_3378 717
49 3300046531 Ga0495665_0010468 Ga0495665_0010468_1286_3505 717
50 3300046533 Ga0495640_0001693 Ga0495640_0001693_11638_13857 717
51 3300046543 Ga0495645_0008566 Ga0495645_0008566_3695_5914 717
52 3300046680 Ga0495646_0010302 Ga0495646_0010302_1159_3378 717
53 3300046794 Ga0495589_0005596 Ga0495589_0005596_3762_5969 717
54 3300047317 Ga0495604_0010751 Ga0495604_0010751_3312_5531 717
55 3300047321 Ga0495676_0029952 Ga0495676_0029952_1338_3545 717
56 3300048088 Ga0495602_0044205 Ga0495602_0044205_1737_3956 717
57 3300049568 Ga0501031_0001454 Ga0501031_0001454_5818_8061 717
58 3300049569 Ga0501032_0016709 Ga0501032_0016709_2663_4906 717
59 3300049570 Ga0501033_0017986 Ga0501033_0017986_250_2493 717
60 3300049571 Ga0501034_0031890 Ga0501034_0031890_402_2645 717
61 3300049572 Ga0501036_0023126 Ga0501036_0023126_2489_4732 717
62 3300049573 Ga0501037_0002995 Ga0501037_0002995_3615_5858 717
63 3300049575 Ga0501039_0004659 Ga0501039_0004659_2446_4689 717
64 3300049576 Ga0501040_0046743 Ga0501040_0046743_378_2621 717
65 3300049577 Ga0501041_0007878 Ga0501041_0007878_2545_4788 717
66 3300049579 Ga0501043_0004044 Ga0501043_0004044_9503_11746 717
67 3300049580 Ga0501046_0002328 Ga0501046_0002328_10533_12776 717
68 3300049581 Ga0501047_0002355 Ga0501047_0002355_2152_4395 717
69 3300049582 Ga0501048_0015983 Ga0501048_0015983_2368_4611 717
70 3300049583 Ga0501067_0007498 Ga0501067_0007498_2727_4970 717
71 3300049584 Ga0501068_0003480 Ga0501068_0003480_1791_4034 717
72 3300049585 Ga0501069_0015217 Ga0501069_0015217_250_2493 717
73 3300049587 Ga0501071_0002511 Ga0501071_0002511_6233_8476 717
74 3300049588 Ga0501072_0003842 Ga0501072_0003842_6361_8604 717
75 3300049589 Ga0501073_0056599 Ga0501073_0056599_250_2493 717
76 3300049592 Ga0501076_0005034 Ga0501076_0005034_6815_9058 717
77 3300049593 Ga0501077_0008166 Ga0501077_0008166_2616_4859 717
78 3300049741 Ga0501079_0003884 Ga0501079_0003884_2674_4917 717
79 3300049744 Ga0501083_0015551 Ga0501083_0015551_2684_4927 717
80 3300049822 Ga0501035_0003354 Ga0501035_0003354_12342_14585 717
81 3300049823 Ga0501044_0002994 Ga0501044_0002994_14053_16296 717
82 3300060353 Ga0501082_0018484 Ga0501082_0018484_2695_4938 717
83 3300047317 Ga0495604_0003576 Ga0495604_0003576_2791_5028 718
84 iso_pu_bacteria 2643221587 2643944046 718
85 iso_pu_bacteria 2643221670 2644387005 718
86 iso_pu_bacteria 2643221677 2644434783 718
87 iso_pu_bacteria 2918501144 2918506633 718
88 3300046522 Ga0495643_0011019 Ga0495643_0011019_1674_3923 719
89 3300046679 Ga0495623_0013476 Ga0495623_0013476_2235_4562 719
90 3300047317 Ga0495604_0002998 Ga0495604_0002998_5584_7911 719
91 3300047323 Ga0495683_0027723 Ga0495683_0027723_384_2633 719
92 3300047444 Ga0495675_0013612 Ga0495675_0013612_1180_3507 719
93 3300047472 Ga0495686_0008118 Ga0495686_0008118_5000_7249 719
94 3300053161 Ga0500634_0000454 Ga0500634_0000454_10266_12539 719
95 iso_pu_bacteria 2554235005 2554256133 719
96 iso_pu_bacteria 2582581312 2585297579 719
97 iso_pu_bacteria 2643221548 2643764121 719
98 iso_pu_bacteria 2643221578 2643902132 719
99 iso_pu_bacteria 2643221673 2644406713 719
100 iso_pu_bacteria 2643221682 2644461446 719
101 iso_pu_bacteria 2808606982 2811844257 719
102 iso_pu_bacteria 2818991463 2819694519 719
103 iso_pu_bacteria 2862178590 2862186537 719
104 iso_pu_bacteria 2867369537 2867373974 719
105 iso_pu_bacteria 2873151551 2873153942 719
106 iso_pu_bacteria 2875391855 2875396848 719
107 iso_pu_bacteria 2946045630 2946047724 719
108 iso_pu_bacteria 2966598605 2966600760 719
109 iso_pu_bacteria 3006493962 3006496740 719
110 iso_pu_bacteria 8056829672 8056834076 719
111 3300046454 Ga0495592_0007758 Ga0495592_0007758_525_2789 720
112 3300046455 Ga0495603_0018777 Ga0495603_0018777_1241_3505 720
113 3300046455 Ga0495603_0027204 Ga0495603_0027204_530_2713 720
114 3300046476 Ga0495662_0013256 Ga0495662_0013256_108_2291 720
115 3300046492 Ga0495585_0033814 Ga0495585_0033814_81_2342 720
116 3300046499 Ga0495594_0015635 Ga0495594_0015635_923_3160 720
117 3300046516 Ga0495628_0009865 Ga0495628_0009865_5176_7440 720
118 3300046519 Ga0495632_0028469 Ga0495632_0028469_502_2739 720
119 3300046529 Ga0495652_0046546 Ga0495652_0046546_1173_3437 720
120 3300046533 Ga0495640_0000204 Ga0495640_0000204_12796_15060 720
121 3300046642 Ga0495634_0007061 Ga0495634_0007061_6142_8406 720
122 3300046675 Ga0495657_0003330 Ga0495657_0003330_3938_6202 720
123 3300046675 Ga0495657_0011851 Ga0495657_0011851_1094_3277 720
124 3300046689 Ga0495613_0001019 Ga0495613_0001019_16121_18304 720
125 3300047318 Ga0495636_0003391 Ga0495636_0003391_1551_3734 720
126 3300047321 Ga0495676_0038154 Ga0495676_0038154_1004_3268 720
127 3300049569 Ga0501032_0027404 Ga0501032_0027404_377_2593 720
128 3300049570 Ga0501033_0023895 Ga0501033_0023895_995_3211 720
129 3300049571 Ga0501034_0021859 Ga0501034_0021859_715_2931 720
130 3300049572 Ga0501036_0073319 Ga0501036_0073319_618_2834 720
131 3300049574 Ga0501038_0039083 Ga0501038_0039083_1450_3666 720
132 3300049581 Ga0501047_0000029 Ga0501047_0000029_107842_110121 720
133 3300049822 Ga0501035_0039109 Ga0501035_0039109_962_3178 720
134 iso_pu_bacteria 2582581313 2585311274 720
135 iso_pu_bacteria 2582581314 2585317853 720
136 iso_pu_bacteria 2616644814 2616700479 720
137 iso_pu_bacteria 2643221647 2644269456 720
138 iso_pu_bacteria 2643221678 2644437896 720
139 iso_pu_bacteria 2643221714 2644633468 720
140 iso_pu_bacteria 2784746763 2785341077 720
141 iso_pu_bacteria 2784746768 2785371672 720
142 iso_pu_bacteria 2786546132 2786672783 720
143 iso_pu_bacteria 2802429296 2804848024 720
144 iso_pu_bacteria 2808606359 2808844138 720
145 iso_pu_bacteria 2808606375 2808913745 720
146 iso_pu_bacteria 2811994879 2812355832 720
147 iso_pu_bacteria 2811994917 2812478631 720
148 iso_pu_bacteria 2852635781 2852639593 720
149 iso_pu_bacteria 2862281513 2862284609 720
150 iso_pu_bacteria 2862507626 2862511312 720
151 iso_pu_bacteria 2862574272 2862577374 720
152 iso_pu_bacteria 2867428634 2867433006 720
153 iso_pu_bacteria 2877676314 2877678918 720
154 iso_pu_bacteria 2912723979 2912730046 720
155 iso_pu_bacteria 2935390628 2935392009 720
156 iso_pu_bacteria 2946064051 2946069956 720
157 iso_pu_bacteria 2946072368 2946077863 720
158 iso_pu_bacteria 2954002825 2954005668 720
159 iso_pu_bacteria 2954380949 2954383882 720
160 iso_pu_bacteria 2954673503 2954679087 720
161 iso_pu_bacteria 2954682443 2954685066 720
162 iso_pu_bacteria 2954691527 2954694681 720
163 iso_pu_bacteria 2954701450 2954709885 720
164 iso_pu_bacteria 2954711539 2954714185 720
165 iso_pu_bacteria 2954721474 2954724136 720
166 iso_pu_bacteria 2954731030 2954737703 720
167 iso_pu_bacteria 2954740390 2954743032 720
168 iso_pu_bacteria 2954749733 2954756538 720
169 iso_pu_bacteria 2954759201 2954761990 720
170 iso_pu_bacteria 2990059506 2990060640 720
171 iso_pu_bacteria 3006393351 3006394025 720
172 iso_pu_bacteria 3006486233 3006488854 720
173 iso_pu_bacteria 8008574985 8008577043 720
174 iso_pu_bacteria 8025413630 8025416283 720
175 3300049574 Ga0501038_0048886 Ga0501038_0048886_493_2739 721
176 3300049579 Ga0501043_0016178 Ga0501043_0016178_2412_4658 721
177 3300049823 Ga0501044_0016225 Ga0501044_0016225_978_3224 721
178 3300030521 Ga0307511_10067013 Ga0307511_100670131 723
179 3300037466 Ga0395898_0000967 Ga0395898_0000967_30955_33147 723
180 3300046455 Ga0495603_0001130 Ga0495603_0001130_2396_4591 723
181 3300046455 Ga0495603_0007100 Ga0495603_0007100_2864_5059 723
182 3300046459 Ga0495629_0007873 Ga0495629_0007873_2761_4956 723
183 3300046499 Ga0495594_0000462 Ga0495594_0000462_3046_5241 723
184 3300046689 Ga0495613_0001219 Ga0495613_0001219_2422_4617 723
185 3300047318 Ga0495636_0003259 Ga0495636_0003259_2606_4798 723
186 3300047321 Ga0495676_0014190 Ga0495676_0014190_4274_6469 723
187 3300047321 Ga0495676_0016270 Ga0495676_0016270_2022_4217 723
188 3300048089 Ga0495614_0000547 Ga0495614_0000547_10968_13163 723
189 iso_pu_bacteria 2912757875 2912762901 723
190 iso_pu_bacteria 8025530807 8025535240 723
191 3300003316 rootH1_10005585 rootH1_100055852 724
192 3300003323 rootH1_10009402 rootH1_100094028 724
193 3300006042 Ga0075368_10012206 Ga0075368_100122062 724
194 3300006048 Ga0075363_100001832 Ga0075363_1000018323 724
195 3300006178 Ga0075367_10001772 Ga0075367_100017722 724
196 3300014497 Ga0182008_10003491 Ga0182008_100034917 724
197 3300015262 Ga0182007_10001278 Ga0182007_1000127811 724
198 3300015688 Ga0183367_1013 Ga0183367_1013237 724
199 3300025297 Ga0209758_1004298 Ga0209758_10042983 724
200 3300027866 Ga0209813_10003043 Ga0209813_100030432 724
201 3300028786 Ga0307517_10007472 Ga0307517_1000747211 724
202 3300028794 Ga0307515_10000423 Ga0307515_1000042321 724
203 3300030521 Ga0307511_10075633 Ga0307511_100756331 724
204 3300030522 Ga0307512_10004807 Ga0307512_1000480710 724
205 3300030522 Ga0307512_10015082 Ga0307512_100150822 724
206 3300031507 Ga0307509_10023087 Ga0307509_100230871 724
207 3300031507 Ga0307509_10132519 Ga0307509_101325191 724
208 3300031649 Ga0307514_10007529 Ga0307514_100075292 724
209 3300031730 Ga0307516_10053244 Ga0307516_100532442 724
210 3300031730 Ga0307516_10084018 Ga0307516_100840182 724
211 3300031838 Ga0307518_10007723 Ga0307518_100077232 724
212 3300033179 Ga0307507_10025470 Ga0307507_100254707 724
213 3300033179 Ga0307507_10108815 Ga0307507_101088151 724
214 3300033180 Ga0307510_10008041 Ga0307510_100080419 724
215 3300033180 Ga0307510_10091520 Ga0307510_100915201 724
216 3300037466 Ga0395898_0023813 Ga0395898_0023813_1119_3311 724
217 3300042014 Ga0439457_000078 Ga0439457_000078_15714_17930 724
218 3300042014 Ga0439457_004558 Ga0439457_004558_632_2827 724
219 3300042138 Ga0450903_000030 Ga0450903_000030_10175_12367 724
220 3300044658 Ga0466972_0001639 Ga0466972_0001639_2376_4571 724
221 3300045976 Ga0466967_0003200 Ga0466967_0003200_3948_6140 724
222 3300045976 Ga0466967_0028677 Ga0466967_0028677_1186_3381 724
223 3300046454 Ga0495592_0034872 Ga0495592_0034872_1292_3484 724
224 3300046455 Ga0495603_0001613 Ga0495603_0001613_6819_9014 724
225 3300046462 Ga0495651_0001513 Ga0495651_0001513_3543_5735 724
226 3300046472 Ga0495580_0021896 Ga0495580_0021896_2171_4366 724
227 3300046473 Ga0495582_0025879 Ga0495582_0025879_379_2571 724
228 3300046474 Ga0495605_0008695 Ga0495605_0008695_575_2770 724
229 3300046475 Ga0495639_0007196 Ga0495639_0007196_1285_3480 724
230 3300046477 Ga0495664_0012710 Ga0495664_0012710_1284_3476 724
231 3300046507 Ga0495606_0033927 Ga0495606_0033927_1293_3488 724
232 3300046513 Ga0495616_0023511 Ga0495616_0023511_723_2918 724
233 3300046515 Ga0495620_0019351 Ga0495620_0019351_566_2761 724
234 3300046533 Ga0495640_0020846 Ga0495640_0020846_2186_4381 724
235 3300046542 Ga0495597_0030014 Ga0495597_0030014_171_2366 724
236 3300046543 Ga0495645_0032380 Ga0495645_0032380_1175_3367 724
237 3300046558 Ga0495633_0013271 Ga0495633_0013271_1064_3259 724
238 3300046616 Ga0495668_0027291 Ga0495668_0027291_49_2244 724
239 3300046642 Ga0495634_0002887 Ga0495634_0002887_2730_4922 724
240 3300046660 Ga0495625_0016955 Ga0495625_0016955_2175_4367 724
241 3300046660 Ga0495625_0026962 Ga0495625_0026962_1858_4065 724
242 3300046663 Ga0495635_0001694 Ga0495635_0001694_10147_12339 724
243 3300046674 Ga0495588_0001452 Ga0495588_0001452_7235_9427 724
244 3300046675 Ga0495657_0038984 Ga0495657_0038984_552_2747 724
245 3300046680 Ga0495646_0000569 Ga0495646_0000569_5303_7495 724
246 3300046689 Ga0495613_0007687 Ga0495613_0007687_2994_5186 724
247 3300046689 Ga0495613_0008324 Ga0495613_0008324_141_2336 724
248 3300046694 Ga0495649_0022645 Ga0495649_0022645_24_2219 724
249 3300046794 Ga0495589_0017289 Ga0495589_0017289_584_2776 724
250 3300046809 Ga0495600_0005553 Ga0495600_0005553_2378_4570 724
251 3300047315 Ga0495581_0001763 Ga0495581_0001763_3420_5612 724
252 3300047315 Ga0495581_0030733 Ga0495581_0030733_176_2371 724
253 3300047319 Ga0495674_0041107 Ga0495674_0041107_773_2968 724
254 3300047319 Ga0495674_0054433 Ga0495674_0054433_1038_3233 724
255 3300047321 Ga0495676_0010966 Ga0495676_0010966_282_2474 724
256 3300047321 Ga0495676_0014861 Ga0495676_0014861_2767_4962 724
257 3300047321 Ga0495676_0080129 Ga0495676_0080129_115_2310 724
258 3300047443 Ga0495687_015941 Ga0495687_015941_22_2217 724
259 3300047444 Ga0495675_0018514 Ga0495675_0018514_1530_3722 724
260 3300047447 Ga0495685_003038 Ga0495685_003038_2440_4632 724
261 3300047470 Ga0495681_0000229 Ga0495681_0000229_25126_27318 724
262 3300048088 Ga0495602_0035303 Ga0495602_0035303_1411_3603 724
263 3300048089 Ga0495614_0010134 Ga0495614_0010134_1893_4085 724
264 3300048091 Ga0495626_0007937 Ga0495626_0007937_2884_5079 724
265 3300049570 Ga0501033_0004199 Ga0501033_0004199_8667_10862 724
266 3300049572 Ga0501036_0000892 Ga0501036_0000892_19893_22088 724
267 3300049574 Ga0501038_0005006 Ga0501038_0005006_6067_8259 724
268 3300049574 Ga0501038_0018356 Ga0501038_0018356_4021_6216 724
269 3300049575 Ga0501039_0002014 Ga0501039_0002014_3567_5762 724
270 3300049579 Ga0501043_0002751 Ga0501043_0002751_10034_12229 724
271 3300049586 Ga0501070_0002575 Ga0501070_0002575_8301_10496 724
272 3300049590 Ga0501074_0003155 Ga0501074_0003155_3828_6023 724
273 3300049742 Ga0501080_0057054 Ga0501080_0057054_125_2320 724
274 3300049822 Ga0501035_0028655 Ga0501035_0028655_374_2569 724
275 3300049823 Ga0501044_0007200 Ga0501044_0007200_6924_9119 724
276 3300049823 Ga0501044_0121419 Ga0501044_0121419_70_2262 724
277 3300050494 nmdc:mga06z11_3340_c1 nmdc:mga06z11_3340_c1_860_3052 724
278 3300050495 nmdc:mga04h51_3335_c1 nmdc:mga04h51_3335_c1_637_2829 724
279 3300053095 Ga0500640_007417 Ga0500640_007417_861_3053 724
280 3300053098 Ga0500650_0019456 Ga0500650_0019456_664_2856 724
281 3300053140 Ga0500573_0017264 Ga0500573_0017264_1263_3455 724
282 3300053157 Ga0500624_001279 Ga0500624_001279_2005_4197 724

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03119

DNA_ligase_ZBD

NAD-dependent DNA ligase C4 zinc finger domain

422

450

0.98

PF12826

HHH_2

Helix-hairpin-helix motif

560

623

0.98

PF03120

DNA_ligase_OB

NAD-dependent DNA ligase OB-fold domain

336

414

0.97

PF01653

DNA_ligase_aden

NAD-dependent DNA ligase adenylation domain

79

333

0.96

PF00533

BRCT

BRCA1 C Terminus (BRCT) domain

640

716

0.95

PF14520

HHH_5

Helix-hairpin-helix domain

563

613

0.95

PF12738

PTCB-BRCT

twin BRCT domain

648

709

0.93

PF22745

Nlig-Ia

DNA ligase-like, N-terminal NAD+-binding domain

15

75

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bac-assembly1.cif.gz_A-2 structural basis for the inhibition of bacterial nad+ dependent dna ligase 0.9347 74 318
6ksd-assembly1.cif.gz_A structural basis for domain rotation during adenylation of active site k123 and fragment library screening against nad+ -dependent dna ligase from mycobacterium tuberculosis 0.9327 8 321
6lw8-assembly1.cif.gz_A structural basis for domain rotation during adenylation of active site k123 and fragment library screening against nad+ -dependent dna ligase from mycobacterium tuberculosis 0.9322 7 321
6krh-assembly1.cif.gz_A structural basis for domain rotation during adenylation of active site k123 and fragment library screening against nad+ -dependent dna ligase from mycobacterium tuberculosis 0.9313 7 319
6kdu-assembly1.cif.gz_A structural basis for domain rotation during adenylation of active site k123 and fragment library screening against nad+ -dependent dna ligase from mycobacterium tuberculosis 0.9312 7 321
ID Description Score Start End Superfamily
af_P9WNV1_524_596_1.10.150.20 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 1.003 547 618 1.10.150.20
af_P9WNV1_524_596_1.10.150.20 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9755 547 618 1.10.150.20
4cc5A02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1; 0.9743 86 318 3.30.1490.70
5tt5A01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9709 9 66 1.10.287.610
af_Q2G1Y0_497_576_1.10.150.20 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9707 546 623 1.10.150.20
ID Description Score Start End GO Terms
AF-A0A358HP82-F1-model_v4 DNA ligase (NAD(+)) LigA 0.9914 117 235 GO:0003911
GO:0006281
AF-A0A540WI88-F1-model_v4 NAD-dependent DNA ligase LigA (EC 6.5.1.2) 0.979 134 259 GO:0003911
AF-A0A377DQG5-F1-model_v4 DNA ligase (EC 6.5.1.2) 0.9759 154 314 GO:0003911
AF-A0A1V4S330-F1-model_v4 NAD-dependent DNA ligase N-terminal domain-containing protein 0.9725 68 319 GO:0003911
AF-A0A529UDK6-F1-model_v4 deleted 0.9718 127 314

Feature Viewer

pLDDT pTM Quality
87.01 0.62 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map