F384995

General Info

Members Datasets Scaffolds Average Seq Length
282 159 564 138

Family's Representative Sequence

Representative Sequence 3300026035|Ga0207703_10048220|Ga0207703_100482204
Length 165
Sequence VRERFLLFFLLTVIYTTSTLDLPMSRTTSTPFAFRLDQQSGVPVYRQIIDQVQAGIASGTLASGDQLPTVRQVAVDLAINPNTVLRAYRELEIRDVLETQQGTGTFISDRKMKHDGVERSRQLDQLASEFVARAGAGGFTVQELIENLRDRIPEQNPPAQEKRRK

Samples

Sample ID Description Type Environment
1 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
45 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
113 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
116 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
117 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
118 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
120 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
121 3300033544 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 Metagenome Unclassified
122 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
123 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
124 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
125 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
126 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
127 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
128 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
129 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
130 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
132 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
133 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
134 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
137 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
138 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
139 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
140 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
141 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
144 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
145 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
146 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
147 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
148 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
149 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
158 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
159 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.65
Metatranscriptomes 0.35
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.35
Nodule 0
Rhizoplane 1.77
Rhizosphere 96.81
Stem 0
Stem Tuber 0
Unclassified 35.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207703_10048220 3300026035 Unclassified 3437
2 Ga0070683_100118509 3300005329 Bacteria 2500
3 Ga0070677_10420845 3300005333 Unclassified 708
4 Ga0068869_100006789 3300005334 Bacteria 7276
5 Ga0070666_10139808 3300005335 Unclassified 1686
6 Ga0070666_10492695 3300005335 Bacteria 888
7 Ga0068868_101034873 3300005338 Bacteria 753
8 Ga0070660_100097954 3300005339 Bacteria 2321
9 Ga0070689_101667699 3300005340 Unclassified 580
10 Ga0070691_10511637 3300005341 Bacteria 696
11 Ga0070661_100384226 3300005344 Unclassified 1107
12 Ga0070661_100391108 3300005344 Unclassified 1098
13 Ga0070692_10436091 3300005345 Bacteria 835
14 Ga0070675_100999201 3300005354 Unclassified 768
15 Ga0070671_101517757 3300005355 Unclassified 593
16 Ga0070674_100242067 3300005356 Unclassified 1413
17 Ga0070673_100212833 3300005364 Bacteria 1670
18 Ga0070659_100180143 3300005366 Bacteria 1734
19 Ga0070667_100044755 3300005367 Bacteria 3718
20 Ga0070667_101513782 3300005367 Bacteria 630
21 Ga0070709_10113252 3300005434 Bacteria 1827
22 Ga0070713_100543102 3300005436 Unclassified 1100
23 Ga0070663_100008503 3300005455 Bacteria 6317
24 Ga0070678_100304220 3300005456 Unclassified 1356
25 Ga0070662_100011674 3300005457 Bacteria 5798
26 Ga0070681_10333994 3300005458 Unclassified 1425
27 Ga0068867_100364283 3300005459 Unclassified 1210
28 Ga0068867_100562063 3300005459 Bacteria 990
29 Ga0070685_10190317 3300005466 Bacteria 1327
30 Ga0070685_10684252 3300005466 Unclassified 746
31 Ga0070685_11089913 3300005466 Bacteria 603
32 Ga0070679_100282790 3300005530 Bacteria 1611
33 Ga0070679_100940903 3300005530 Bacteria 808
34 Ga0070684_100507625 3300005535 Bacteria 1117
35 Ga0070684_100655209 3300005535 Bacteria 977
36 Ga0070684_100910275 3300005535 Bacteria 824
37 Ga0070684_102029688 3300005535 Unclassified 543
38 Ga0070697_100863178 3300005536 Unclassified 802
39 Ga0068853_100272901 3300005539 Bacteria 1558
40 Ga0070693_100490554 3300005547 Bacteria 870
41 Ga0070665_101326895 3300005548 Bacteria 729
42 Ga0068855_100622659 3300005563 Bacteria 1162
43 Ga0070664_100350160 3300005564 Bacteria 1343
44 Ga0068857_100008815 3300005577 Bacteria 8736
45 Ga0068857_101203647 3300005577 Bacteria 734
46 Ga0068854_100440785 3300005578 Bacteria 1086
47 Ga0068856_100016843 3300005614 Bacteria 7082
48 Ga0068856_101210285 3300005614 Unclassified 772
49 Ga0068856_101351133 3300005614 Unclassified 727
50 Ga0068852_101386749 3300005616 Bacteria 725
51 Ga0068852_101770859 3300005616 Unclassified 640
52 Ga0068859_100044049 3300005617 Bacteria 4485
53 Ga0068859_100814212 3300005617 Bacteria 1021
54 Ga0068859_101457578 3300005617 Unclassified 755
55 Ga0068864_100215753 3300005618 Bacteria 1769
56 Ga0068864_100558004 3300005618 Bacteria 1108
57 Ga0068864_100977980 3300005618 Bacteria 838
58 Ga0068866_10108251 3300005718 Unclassified 1546
59 Ga0068863_100357666 3300005841 Bacteria 1423
60 Ga0068863_100459914 3300005841 Bacteria 1250
61 Ga0068858_100062286 3300005842 Unclassified 3449
62 Ga0068858_100259476 3300005842 Bacteria 1652
63 Ga0068858_100321171 3300005842 Bacteria 1480
64 Ga0068858_100454360 3300005842 Bacteria 1235
65 Ga0068860_100193536 3300005843 Bacteria 1968
66 Ga0081540_1084058 3300005983 Bacteria 1422
67 Ga0070717_10006252 3300006028 Bacteria 8744
68 Ga0097621_100044835 3300006237 Bacteria 3569
69 Ga0097621_100166189 3300006237 Bacteria 1900
70 Ga0097621_100366958 3300006237 Unclassified 1284
71 Ga0097621_100509591 3300006237 Unclassified 1091
72 Ga0068871_100336255 3300006358 Bacteria 1333
73 Ga0068871_100367901 3300006358 Bacteria 1275
74 Ga0068871_101088931 3300006358 Unclassified 747
75 Ga0097620_100044049 3300006931 Bacteria 4485
76 Ga0097620_100814418 3300006931 Bacteria 1021
77 Ga0097620_101457094 3300006931 Unclassified 755
78 Ga0105240_10122475 3300009093 Bacteria 3130
79 Ga0105240_10122946 3300009093 Unclassified 3123
80 Ga0105240_10270953 3300009093 Bacteria 1954
81 Ga0105240_10305816 3300009093 Bacteria 1817
82 Ga0105240_10800003 3300009093 Unclassified 1021
83 Ga0105240_11171686 3300009093 Bacteria 815
84 Ga0105245_10005517 3300009098 Bacteria 11112
85 Ga0105245_10008601 3300009098 Bacteria 8905
86 Ga0105245_10060841 3300009098 Bacteria 3402
87 Ga0105245_10632377 3300009098 Unclassified 1099
88 Ga0105247_10410459 3300009101 Bacteria 967
89 Ga0114129_10379177 3300009147 Bacteria 1868
90 Ga0105243_11551833 3300009148 Unclassified 687
91 Ga0105243_12240504 3300009148 Unclassified 583
92 Ga0105241_10008715 3300009174 Bacteria 7451
93 Ga0105241_10040617 3300009174 Bacteria 3513
94 Ga0105241_10049187 3300009174 Unclassified 3210
95 Ga0105241_11277924 3300009174 Unclassified 698
96 Ga0105242_10306518 3300009176 Unclassified 1451
97 Ga0105242_10380250 3300009176 Bacteria 1312
98 Ga0105242_11124741 3300009176 Bacteria 801
99 Ga0105248_10060631 3300009177 Unclassified 4248
100 Ga0105248_12447583 3300009177 Unclassified 595
101 Ga0105237_11066181 3300009545 Unclassified 815
102 Ga0105238_10438739 3300009551 Unclassified 1302
103 Ga0105238_10795725 3300009551 Bacteria 961
104 Ga0105238_11417232 3300009551 Bacteria 722
105 Ga0105238_11870120 3300009551 Unclassified 633
106 Ga0105238_12123419 3300009551 Unclassified 596
107 Ga0105249_10276778 3300009553 Bacteria 1674
108 Ga0105249_10287815 3300009553 Bacteria 1643
109 Ga0105239_10091045 3300010375 Bacteria 3366
110 Ga0157371_10213091 3300013102 Bacteria 1386
111 Ga0157370_10072381 3300013104 Bacteria 3252
112 Ga0157370_10395891 3300013104 Bacteria 1272
113 Ga0157369_10031838 3300013105 Bacteria 5803
114 Ga0157369_10252851 3300013105 Bacteria 1839
115 Ga0157369_12576048 3300013105 Unclassified 514
116 Ga0157374_10622582 3300013296 Bacteria 1090
117 Ga0157374_10792785 3300013296 Unclassified 963
118 Ga0157374_12894910 3300013296 Unclassified 507
119 Ga0157378_10013698 3300013297 Bacteria 7093
120 Ga0157378_10073427 3300013297 Bacteria 3075
121 Ga0157378_10258687 3300013297 Bacteria 1669
122 Ga0157378_11264071 3300013297 Unclassified 779
123 Ga0163162_12608224 3300013306 Unclassified 581
124 Ga0157372_10122683 3300013307 Unclassified 2986
125 Ga0157372_10132556 3300013307 Bacteria 2868
126 Ga0157372_10219314 3300013307 Bacteria 2205
127 Ga0157375_10156252 3300013308 Bacteria 2420
128 Ga0157375_10383411 3300013308 Unclassified 1572
129 Ga0157375_11337690 3300013308 Bacteria 843
130 Ga0157375_13249867 3300013308 Bacteria 542
131 Ga0163163_11076345 3300014325 Unclassified 867
132 Ga0163163_11253888 3300014325 Unclassified 804
133 Ga0157380_13364876 3300014326 Bacteria 511
134 Ga0157379_11774184 3300014968 Bacteria 606
135 Ga0157379_12113721 3300014968 Unclassified 558
136 Ga0157376_10428806 3300014969 Bacteria 1285
137 Ga0157376_10567403 3300014969 Unclassified 1125
138 Ga0157376_10643597 3300014969 Unclassified 1060
139 Ga0157376_10862556 3300014969 Unclassified 921
140 Ga0157376_11536195 3300014969 Unclassified 699
141 Ga0157376_12200784 3300014969 Unclassified 590
142 Ga0157376_12607527 3300014969 Unclassified 545
143 Ga0157376_12713288 3300014969 Unclassified 535
144 Ga0207697_10095245 3300025315 Bacteria 1265
145 Ga0207710_10145435 3300025900 Bacteria 1147
146 Ga0207680_10423153 3300025903 Bacteria 943
147 Ga0207680_10856592 3300025903 Bacteria 651
148 Ga0207699_10098778 3300025906 Bacteria 1848
149 Ga0207645_10158138 3300025907 Bacteria 1482
150 Ga0207645_10853130 3300025907 Bacteria 619
151 Ga0207654_10016331 3300025911 Bacteria 3864
152 Ga0207654_10051847 3300025911 Unclassified 2363
153 Ga0207707_10618334 3300025912 Unclassified 915
154 Ga0207695_10282929 3300025913 Bacteria 1552
155 Ga0207695_10542844 3300025913 Bacteria 1044
156 Ga0207695_10662012 3300025913 Bacteria 925
157 Ga0207695_10794995 3300025913 Unclassified 826
158 Ga0207671_10766659 3300025914 Unclassified 766
159 Ga0207657_10073729 3300025919 Bacteria 2883
160 Ga0207649_10311663 3300025920 Unclassified 1154
161 Ga0207649_11017961 3300025920 Unclassified 652
162 Ga0207652_10358260 3300025921 Bacteria 1317
163 Ga0207694_10024978 3300025924 Unclassified 4540
164 Ga0207694_10057973 3300025924 Bacteria 3012
165 Ga0207694_11121905 3300025924 Unclassified 665
166 Ga0207694_11314447 3300025924 Unclassified 611
167 Ga0207650_10268299 3300025925 Bacteria 1386
168 Ga0207650_11680660 3300025925 Bacteria 538
169 Ga0207659_11020921 3300025926 Unclassified 712
170 Ga0207659_11608113 3300025926 Unclassified 555
171 Ga0207687_10007394 3300025927 Bacteria 7230
172 Ga0207687_10010718 3300025927 Bacteria 5987
173 Ga0207687_10377312 3300025927 Unclassified 1161
174 Ga0207687_10385954 3300025927 Unclassified 1149
175 Ga0207700_10025809 3300025928 Bacteria 4087
176 Ga0207644_11088083 3300025931 Unclassified 672
177 Ga0207690_10163968 3300025932 Bacteria 1659
178 Ga0207706_10002748 3300025933 Bacteria 17108
179 Ga0207686_10601673 3300025934 Bacteria 865
180 Ga0207686_10680922 3300025934 Bacteria 816
181 Ga0207686_10956340 3300025934 Bacteria 693
182 Ga0207670_10277472 3300025936 Bacteria 1305
183 Ga0207670_10672111 3300025936 Bacteria 855
184 Ga0207691_10062790 3300025940 Bacteria 3370
185 Ga0207691_10433142 3300025940 Bacteria 1120
186 Ga0207711_10242346 3300025941 Bacteria 1653
187 Ga0207711_10250273 3300025941 Bacteria 1627
188 Ga0207711_10420702 3300025941 Unclassified 1243
189 Ga0207689_10077943 3300025942 Bacteria 2723
190 Ga0207689_10281822 3300025942 Bacteria 1376
191 Ga0207689_10433127 3300025942 Bacteria 1098
192 Ga0207689_11004343 3300025942 Bacteria 704
193 Ga0207689_11077851 3300025942 Unclassified 677
194 Ga0207661_10055867 3300025944 Bacteria 3168
195 Ga0207661_10241842 3300025944 Bacteria 1602
196 Ga0207661_10366530 3300025944 Bacteria 1302
197 Ga0207661_10391856 3300025944 Bacteria 1258
198 Ga0207661_11328244 3300025944 Unclassified 660
199 Ga0207667_10872211 3300025949 Bacteria 893
200 Ga0207651_11245624 3300025960 Unclassified 668
201 Ga0207712_11265899 3300025961 Bacteria 659
202 Ga0207677_10521214 3300026023 Bacteria 1031
203 Ga0207703_10133364 3300026035 Bacteria 2147
204 Ga0207703_10365521 3300026035 Bacteria 1331
205 Ga0207703_10997157 3300026035 Bacteria 803
206 Ga0207639_10129619 3300026041 Bacteria 2086
207 Ga0207678_10007925 3300026067 Bacteria 9364
208 Ga0207702_10038309 3300026078 Bacteria 4015
209 Ga0207702_10220969 3300026078 Bacteria 1765
210 Ga0207702_11167238 3300026078 Bacteria 764
211 Ga0207702_11588221 3300026078 Unclassified 647
212 Ga0207641_10360886 3300026088 Unclassified 1387
213 Ga0207641_10405762 3300026088 Unclassified 1309
214 Ga0207648_10377378 3300026089 Bacteria 1282
215 Ga0207648_10459253 3300026089 Bacteria 1161
216 Ga0207676_10175372 3300026095 Bacteria 1872
217 Ga0207676_10503729 3300026095 Bacteria 1150
218 Ga0207674_10058486 3300026116 Bacteria 3904
219 Ga0207675_101095594 3300026118 Bacteria 816
220 Ga0207698_10611472 3300026142 Bacteria 1075
221 Ga0265354_1011992 3300028016 Bacteria 823
222 Ga0268266_10395204 3300028379 Unclassified 1306
223 Ga0268266_10792783 3300028379 Bacteria 915
224 Ga0268264_10144473 3300028381 Unclassified 2125
225 Ga0265323_10000102 3300028653 Bacteria 48958
226 Ga0265336_10208722 3300028666 Unclassified 580
227 Ga0265338_10689125 3300028800 Unclassified 706
228 Ga0265760_10103522 3300031090 Bacteria 901
229 Ga0265330_10192884 3300031235 Bacteria 862
230 Ga0265316_10085680 3300031344 Bacteria 2410
231 Ga0265316_10205981 3300031344 Bacteria 1456
232 Ga0316215_1000370 3300033544 Bacteria 5544
233 Ga0373926_0288845 3300035083 Unclassified 639
234 Ga0373936_0324154 3300035113 Bacteria 698
235 Ga0373945_0020671 3300035116 Bacteria 2255
236 Ga0373954_0001614 3300035118 Bacteria 9214
237 Ga0373946_0021941 3300035171 Bacteria 2481
238 Ga0373927_0001777 3300035695 Bacteria 16078
239 Ga0373933_0767290 3300035724 Unclassified 635
240 Ga0373947_0000987 3300035725 Bacteria 17371
241 Ga0373937_0835292 3300036401 Bacteria 869
242 Ga0373937_0997670 3300036401 Unclassified 786
243 Ga0373925_0000970 3300037068 Bacteria 26079
244 Ga0373925_0284666 3300037068 Bacteria 1332
245 Ga0436364_0008754 3300037853 Bacteria 2489
246 Ga0436364_0640779 3300037853 Unclassified 2425
247 Ga0451577_0538676 3300042876 Unclassified 1060
248 Ga0451577_0803304 3300042876 Unclassified 850
249 Ga0466961_0784073 3300044693 Bacteria 569
250 Ga0451576_0416566 3300045051 Unclassified 1409
251 Ga0495651_0640290 3300046462 Bacteria 667
252 Ga0495651_0804485 3300046462 Bacteria 580
253 Ga0495662_0499869 3300046476 Unclassified 596
254 Ga0495664_0013042 3300046477 Bacteria 4712
255 Ga0495664_0321517 3300046477 Bacteria 933
256 Ga0495585_0367307 3300046492 Unclassified 697
257 Ga0495594_0257072 3300046499 Bacteria 995
258 Ga0495618_0069155 3300046514 Bacteria 2245
259 Ga0495628_0023842 3300046516 Bacteria 5017
260 Ga0495628_0202800 3300046516 Bacteria 1494
261 Ga0495652_0060390 3300046529 Bacteria 3204
262 Ga0495652_0409191 3300046529 Unclassified 958
263 Ga0495586_0185921 3300046535 Unclassified 1176
264 Ga0495645_0003487 3300046543 Bacteria 10667
265 Ga0495599_0129804 3300046678 Unclassified 1565
266 Ga0495599_0441808 3300046678 Bacteria 771
267 Ga0495646_0211553 3300046680 Unclassified 1052
268 Ga0495658_0747887 3300046683 Unclassified 626
269 Ga0495624_0079577 3300046690 Bacteria 2032
270 Ga0495600_0377497 3300046809 Unclassified 885
271 Ga0495674_0054779 3300047319 Bacteria 3500
272 Ga0495674_1206994 3300047319 Unclassified 571
273 Ga0495674_1277097 3300047319 Bacteria 552
274 Ga0496102_0885802 3300048905 Unclassified 814
275 Ga0496104_0179300 3300048907 Bacteria 2029
276 Ga0496112_0542865 3300048915 Bacteria 1097
277 Ga0496112_0888245 3300048915 Bacteria 814
278 Ga0496115_0233870 3300048918 Bacteria 1515
279 nmdc:mga0rr50_1442893_c1 3300050513 Unclassified 582
280 Ga0495601_0088537 3300053077 Bacteria 1991
281 Ga0495619_0215272 3300053085 Unclassified 1331
282 Ga0500644_0012903 3300053088 Bacteria 2322
283 Ga0207703_10048220
284 Ga0070683_100118509
285 Ga0070677_10420845
286 Ga0068869_100006789
287 Ga0070666_10139808
288 Ga0070666_10492695
289 Ga0068868_101034873
290 Ga0070660_100097954
291 Ga0070689_101667699
292 Ga0070691_10511637
293 Ga0070661_100384226
294 Ga0070661_100391108
295 Ga0070692_10436091
296 Ga0070675_100999201
297 Ga0070671_101517757
298 Ga0070674_100242067
299 Ga0070673_100212833
300 Ga0070659_100180143
301 Ga0070667_100044755
302 Ga0070667_101513782
303 Ga0070709_10113252
304 Ga0070713_100543102
305 Ga0070663_100008503
306 Ga0070678_100304220
307 Ga0070662_100011674
308 Ga0070681_10333994
309 Ga0068867_100364283
310 Ga0068867_100562063
311 Ga0070685_10190317
312 Ga0070685_10684252
313 Ga0070685_11089913
314 Ga0070679_100282790
315 Ga0070679_100940903
316 Ga0070684_100507625
317 Ga0070684_100655209
318 Ga0070684_100910275
319 Ga0070684_102029688
320 Ga0070697_100863178
321 Ga0068853_100272901
322 Ga0070693_100490554
323 Ga0070665_101326895
324 Ga0068855_100622659
325 Ga0070664_100350160
326 Ga0068857_100008815
327 Ga0068857_101203647
328 Ga0068854_100440785
329 Ga0068856_100016843
330 Ga0068856_101210285
331 Ga0068856_101351133
332 Ga0068852_101386749
333 Ga0068852_101770859
334 Ga0068859_100044049
335 Ga0068859_100814212
336 Ga0068859_101457578
337 Ga0068864_100215753
338 Ga0068864_100558004
339 Ga0068864_100977980
340 Ga0068866_10108251
341 Ga0068863_100357666
342 Ga0068863_100459914
343 Ga0068858_100062286
344 Ga0068858_100259476
345 Ga0068858_100321171
346 Ga0068858_100454360
347 Ga0068860_100193536
348 Ga0081540_1084058
349 Ga0070717_10006252
350 Ga0097621_100044835
351 Ga0097621_100166189
352 Ga0097621_100366958
353 Ga0097621_100509591
354 Ga0068871_100336255
355 Ga0068871_100367901
356 Ga0068871_101088931
357 Ga0097620_100044049
358 Ga0097620_100814418
359 Ga0097620_101457094
360 Ga0105240_10122475
361 Ga0105240_10122946
362 Ga0105240_10270953
363 Ga0105240_10305816
364 Ga0105240_10800003
365 Ga0105240_11171686
366 Ga0105245_10005517
367 Ga0105245_10008601
368 Ga0105245_10060841
369 Ga0105245_10632377
370 Ga0105247_10410459
371 Ga0114129_10379177
372 Ga0105243_11551833
373 Ga0105243_12240504
374 Ga0105241_10008715
375 Ga0105241_10040617
376 Ga0105241_10049187
377 Ga0105241_11277924
378 Ga0105242_10306518
379 Ga0105242_10380250
380 Ga0105242_11124741
381 Ga0105248_10060631
382 Ga0105248_12447583
383 Ga0105237_11066181
384 Ga0105238_10438739
385 Ga0105238_10795725
386 Ga0105238_11417232
387 Ga0105238_11870120
388 Ga0105238_12123419
389 Ga0105249_10276778
390 Ga0105249_10287815
391 Ga0105239_10091045
392 Ga0157371_10213091
393 Ga0157370_10072381
394 Ga0157370_10395891
395 Ga0157369_10031838
396 Ga0157369_10252851
397 Ga0157369_12576048
398 Ga0157374_10622582
399 Ga0157374_10792785
400 Ga0157374_12894910
401 Ga0157378_10013698
402 Ga0157378_10073427
403 Ga0157378_10258687
404 Ga0157378_11264071
405 Ga0163162_12608224
406 Ga0157372_10122683
407 Ga0157372_10132556
408 Ga0157372_10219314
409 Ga0157375_10156252
410 Ga0157375_10383411
411 Ga0157375_11337690
412 Ga0157375_13249867
413 Ga0163163_11076345
414 Ga0163163_11253888
415 Ga0157380_13364876
416 Ga0157379_11774184
417 Ga0157379_12113721
418 Ga0157376_10428806
419 Ga0157376_10567403
420 Ga0157376_10643597
421 Ga0157376_10862556
422 Ga0157376_11536195
423 Ga0157376_12200784
424 Ga0157376_12607527
425 Ga0157376_12713288
426 Ga0207697_10095245
427 Ga0207710_10145435
428 Ga0207680_10423153
429 Ga0207680_10856592
430 Ga0207699_10098778
431 Ga0207645_10158138
432 Ga0207645_10853130
433 Ga0207654_10016331
434 Ga0207654_10051847
435 Ga0207707_10618334
436 Ga0207695_10282929
437 Ga0207695_10542844
438 Ga0207695_10662012
439 Ga0207695_10794995
440 Ga0207671_10766659
441 Ga0207657_10073729
442 Ga0207649_10311663
443 Ga0207649_11017961
444 Ga0207652_10358260
445 Ga0207694_10024978
446 Ga0207694_10057973
447 Ga0207694_11121905
448 Ga0207694_11314447
449 Ga0207650_10268299
450 Ga0207650_11680660
451 Ga0207659_11020921
452 Ga0207659_11608113
453 Ga0207687_10007394
454 Ga0207687_10010718
455 Ga0207687_10377312
456 Ga0207687_10385954
457 Ga0207700_10025809
458 Ga0207644_11088083
459 Ga0207690_10163968
460 Ga0207706_10002748
461 Ga0207686_10601673
462 Ga0207686_10680922
463 Ga0207686_10956340
464 Ga0207670_10277472
465 Ga0207670_10672111
466 Ga0207691_10062790
467 Ga0207691_10433142
468 Ga0207711_10242346
469 Ga0207711_10250273
470 Ga0207711_10420702
471 Ga0207689_10077943
472 Ga0207689_10281822
473 Ga0207689_10433127
474 Ga0207689_11004343
475 Ga0207689_11077851
476 Ga0207661_10055867
477 Ga0207661_10241842
478 Ga0207661_10366530
479 Ga0207661_10391856
480 Ga0207661_11328244
481 Ga0207667_10872211
482 Ga0207651_11245624
483 Ga0207712_11265899
484 Ga0207677_10521214
485 Ga0207703_10133364
486 Ga0207703_10365521
487 Ga0207703_10997157
488 Ga0207639_10129619
489 Ga0207678_10007925
490 Ga0207702_10038309
491 Ga0207702_10220969
492 Ga0207702_11167238
493 Ga0207702_11588221
494 Ga0207641_10360886
495 Ga0207641_10405762
496 Ga0207648_10377378
497 Ga0207648_10459253
498 Ga0207676_10175372
499 Ga0207676_10503729
500 Ga0207674_10058486
501 Ga0207675_101095594
502 Ga0207698_10611472
503 Ga0265354_1011992
504 Ga0268266_10395204
505 Ga0268266_10792783
506 Ga0268264_10144473
507 Ga0265323_10000102
508 Ga0265336_10208722
509 Ga0265338_10689125
510 Ga0265760_10103522
511 Ga0265330_10192884
512 Ga0265316_10085680
513 Ga0265316_10205981
514 Ga0316215_1000370
515 Ga0373926_0288845
516 Ga0373936_0324154
517 Ga0373945_0020671
518 Ga0373954_0001614
519 Ga0373946_0021941
520 Ga0373927_0001777
521 Ga0373933_0767290
522 Ga0373947_0000987
523 Ga0373937_0835292
524 Ga0373937_0997670
525 Ga0373925_0000970
526 Ga0373925_0284666
527 Ga0436364_0008754
528 Ga0436364_0640779
529 Ga0451577_0538676
530 Ga0451577_0803304
531 Ga0466961_0784073
532 Ga0451576_0416566
533 Ga0495651_0640290
534 Ga0495651_0804485
535 Ga0495662_0499869
536 Ga0495664_0013042
537 Ga0495664_0321517
538 Ga0495585_0367307
539 Ga0495594_0257072
540 Ga0495618_0069155
541 Ga0495628_0023842
542 Ga0495628_0202800
543 Ga0495652_0060390
544 Ga0495652_0409191
545 Ga0495586_0185921
546 Ga0495645_0003487
547 Ga0495599_0129804
548 Ga0495599_0441808
549 Ga0495646_0211553
550 Ga0495658_0747887
551 Ga0495624_0079577
552 Ga0495600_0377497
553 Ga0495674_0054779
554 Ga0495674_1206994
555 Ga0495674_1277097
556 Ga0496102_0885802
557 Ga0496104_0179300
558 Ga0496112_0542865
559 Ga0496112_0888245
560 Ga0496115_0233870
561 nmdc:mga0rr50_1442893_c1
562 Ga0495601_0088537
563 Ga0495619_0215272
564 Ga0500644_0012903

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

44

107

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u0y-assembly1.cif.gz_A crystal structure of the dna-binding domains of yvoa in complex with palindromic operator dna 0.9297 14 87
4tv7-assembly1.cif.gz_A crystal structure of bacillus subtilis gabr at 2.05 angstroms resolution 0.9182 13 87
4h0e-assembly1.cif.gz_A crystal structure of mutant orr3 in complex with ntd of arar 0.9166 21 87
4tv7-assembly2.cif.gz_C crystal structure of bacillus subtilis gabr at 2.05 angstroms resolution 0.9144 13 87
4mgr-assembly1.cif.gz_B the crystal structure of bacillus subtilis gabr, an autorepressor and plp- and gaba-dependent transcriptional activator of gabt 0.9095 11 87
ID Description Score Start End Superfamily
2wv0D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9532 21 88 1.10.10.10
2wv0I01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9418 21 88 1.10.10.10
af_Q2G1P1_1_44_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9415 44 87 1.10.10.10
4hamA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.935 13 87 1.10.10.10
2wv0E01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9326 21 88 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A1C5CIU2-F1-model_v4 GntR family transcriptional regulator 0.9643 11 88 GO:0003677
GO:0003700
AF-A0A7K3S837-F1-model_v4 GntR family transcriptional regulator 0.9603 11 88 GO:0003677
GO:0003700
AF-A0A7C7S764-F1-model_v4 deleted 0.9568 11 90
AF-A0A353B023-F1-model_v4 PLP-dependent aminotransferase family protein 0.9554 13 88 GO:0003677
GO:0003700
GO:0008483
GO:0009058
GO:0030170
AF-A0A173TWY5-F1-model_v4 deleted 0.9487 11 90

Map