F384602

General Info

Members Datasets Scaffolds Average Seq Length
281 198 278 332

Family's Representative Sequence

Representative Sequence 3300050512|nmdc:mga0n895_119592_c1|nmdc:mga0n895_119592_c1_107_1216
Length 369
Sequence VLPTVSNGRFSNFTNVGDVFCAPREAVAMTDNKELVLVTGAGGFIGGALISSLRSRGFRHIRGVDVKPLNQWYQRFDAVENLSLDLNLKDNCETAARGATDIYNLAANMGGMGFIENNKALCMLSVLINTHMLQAAVDSGAKRFFYSSSACVYNADKQKTFEAPSLKEEDAYPALAEDGYGWEKLFSERMCRHFREDFGLYTRVARFHNVYGPWGTWYGGREKAPAAICRKVIEAKISGKHEIEIWGTGNQTRSFMFIDDCIKGIDMIMRSQIEEPINLGSSEAVTINQLVDLAEDFAGIKLKRNYDLTAPKGVNGRNSDNTLIQKHLQWEPDTPLRAGLEKTYRWIYDQYLARERGEPGVVREVVAGR

Samples

Sample ID Description Type Environment
1 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
74 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
75 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
76 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
77 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
110 3300028023 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
115 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
116 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
117 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
120 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
121 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
122 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
123 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
124 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
125 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
126 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
127 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
128 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
129 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
133 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
134 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
135 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
136 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
137 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
138 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
139 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
140 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
141 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
142 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
143 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
144 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
145 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
146 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
147 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
148 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
149 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
150 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
151 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
152 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
153 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
154 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
155 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
156 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
157 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
160 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
161 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
162 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
163 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
164 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
165 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
166 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
167 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
168 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
171 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
172 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
176 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
177 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
182 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
183 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
184 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
185 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
189 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
190 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
191 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
192 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
193 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
194 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
195 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
196 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
197 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
198 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.86
Metatranscriptomes 1.07
Isolates 1.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.36
Nodule 0
Rhizoplane 6.41
Rhizosphere 91.1
Stem 0
Stem Tuber 0
Unclassified 2.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100000415 3300005329 Bacteria 29521
2 Ga0070670_100009583 3300005331 Bacteria 8266
3 Ga0068869_100025265 3300005334 Bacteria 4123
4 Ga0068869_100083347 3300005334 Bacteria 2391
5 Ga0070666_10021051 3300005335 Bacteria 4223
6 Ga0070682_100013051 3300005337 Bacteria 4771
7 Ga0068868_100005806 3300005338 Bacteria 8696
8 Ga0068868_100026612 3300005338 Bacteria 4410
9 Ga0070660_100002738 3300005339 Bacteria 12114
10 Ga0070660_100165193 3300005339 Bacteria 1785
11 Ga0070689_100111138 3300005340 Bacteria 2179
12 Ga0070661_100013874 3300005344 Bacteria 5661
13 Ga0070669_100172609 3300005353 Bacteria 1687
14 Ga0070675_100374873 3300005354 Bacteria 1266
15 Ga0070688_100151848 3300005365 Bacteria 1584
16 Ga0070659_100027608 3300005366 Bacteria 4376
17 Ga0070667_100077739 3300005367 Bacteria 2834
18 Ga0070701_10122180 3300005438 Bacteria 1469
19 Ga0070711_100076670 3300005439 Bacteria 2371
20 Ga0070694_100218919 3300005444 Bacteria 1427
21 Ga0070708_100223999 3300005445 Bacteria 1764
22 Ga0070663_100423308 3300005455 Unclassified 1093
23 Ga0070678_100029042 3300005456 Bacteria 3782
24 Ga0070678_100098059 3300005456 Bacteria 2265
25 Ga0070662_100042307 3300005457 Bacteria 3254
26 Ga0070685_10056492 3300005466 Bacteria 2282
27 Ga0070707_100175291 3300005468 Bacteria 2090
28 Ga0070707_100444405 3300005468 Bacteria 1257
29 Ga0070707_100468597 3300005468 Bacteria 1221
30 Ga0070698_100172263 3300005471 Bacteria 2105
31 Ga0070684_100000372 3300005535 Bacteria 30984
32 Ga0070697_100263087 3300005536 Bacteria 1477
33 Ga0070672_100261689 3300005543 Unclassified 1459
34 Ga0070686_100006092 3300005544 Bacteria 6694
35 Ga0070686_100101495 3300005544 Bacteria 1945
36 Ga0070665_100006659 3300005548 Bacteria 11747
37 Ga0070665_100024928 3300005548 Bacteria 6028
38 Ga0068855_100003470 3300005563 Bacteria 19299
39 Ga0068855_100010773 3300005563 Bacteria 11036
40 Ga0068855_100021721 3300005563 Bacteria 7697
41 Ga0070664_100000856 3300005564 Bacteria 23540
42 Ga0068857_100027412 3300005577 Bacteria 5025
43 Ga0068856_100001996 3300005614 Bacteria 21270
44 Ga0070702_100039749 3300005615 Bacteria 2627
45 Ga0068859_100368138 3300005617 Bacteria 1532
46 Ga0068864_100067935 3300005618 Bacteria 3096
47 Ga0068861_100226109 3300005719 Bacteria 1584
48 Ga0068863_100001549 3300005841 Bacteria 22702
49 Ga0068863_100467045 3300005841 Bacteria 1240
50 Ga0068858_100012760 3300005842 Bacteria 7918
51 Ga0068858_100023134 3300005842 Bacteria 5796
52 Ga0068858_100166572 3300005842 Bacteria 2077
53 Ga0068860_100148897 3300005843 Bacteria 2253
54 Ga0068860_100267462 3300005843 Bacteria 1668
55 Ga0068860_100458018 3300005843 Bacteria 1269
56 Ga0068871_100091021 3300006358 Bacteria 2542
57 Ga0075430_100158853 3300006846 Bacteria 1882
58 Ga0075433_10023753 3300006852 Bacteria 5164
59 Ga0075433_10211084 3300006852 Bacteria 1725
60 Ga0075433_10397458 3300006852 Unclassified 1216
61 Ga0075434_100000124 3300006871 Bacteria 45591
62 Ga0075434_100012993 3300006871 Bacteria 7909
63 Ga0075434_100026635 3300006871 Bacteria 5666
64 Ga0075434_100097798 3300006871 Bacteria 2939
65 Ga0075436_100068630 3300006914 Bacteria 2449
66 Ga0097620_100368136 3300006931 Bacteria 1532
67 Ga0075435_100001161 3300007076 Bacteria 16818
68 Ga0075435_100009305 3300007076 Bacteria 7102
69 Ga0075435_100057938 3300007076 Unclassified 3135
70 Ga0105240_10000056 3300009093 Bacteria 224822
71 Ga0105240_10021640 3300009093 Bacteria 8549
72 Ga0111539_10001992 3300009094 Bacteria 27241
73 Ga0105245_10007657 3300009098 Bacteria 9459
74 Ga0105247_10007819 3300009101 Bacteria 6542
75 Ga0105247_10065076 3300009101 Bacteria 2267
76 Ga0114129_10027489 3300009147 Bacteria 8053
77 Ga0105243_10091537 3300009148 Bacteria 2505
78 Ga0105241_10059996 3300009174 Bacteria 2926
79 Ga0105241_10285216 3300009174 Bacteria 1412
80 Ga0105242_10003808 3300009176 Bacteria 11732
81 Ga0105242_10037844 3300009176 Bacteria 3877
82 Ga0105242_10270803 3300009176 Bacteria 1538
83 Ga0105248_10189651 3300009177 Bacteria 2316
84 Ga0105237_10035469 3300009545 Bacteria 5047
85 Ga0105237_10276083 3300009545 Bacteria 1683
86 Ga0105238_10000468 3300009551 Bacteria 42427
87 Ga0105249_10248850 3300009553 Bacteria 1761
88 Ga0105239_10037114 3300010375 Bacteria 5345
89 Ga0105246_10010928 3300011119 Bacteria 5629
90 Ga0105246_10028139 3300011119 Bacteria 3690
91 Ga0157369_10100914 3300013105 Bacteria 3076
92 Ga0157374_10000759 3300013296 Bacteria 28165
93 Ga0157374_10009938 3300013296 Bacteria 8170
94 Ga0157378_10041801 3300013297 Bacteria 4067
95 Ga0157378_10325553 3300013297 Bacteria 1494
96 Ga0163162_10002124 3300013306 Bacteria 18627
97 Ga0163162_10042854 3300013306 Bacteria 4531
98 Ga0157372_10098241 3300013307 Bacteria 3340
99 Ga0157375_10008677 3300013308 Bacteria 8907
100 Ga0157375_10199513 3300013308 Bacteria 2156
101 Ga0157375_10214454 3300013308 Bacteria 2083
102 Ga0157375_10352499 3300013308 Bacteria 1637
103 Ga0163163_10001491 3300014325 Bacteria 19819
104 Ga0163163_10032568 3300014325 Bacteria 5035
105 Ga0163163_10174774 3300014325 Bacteria 2194
106 Ga0157379_10081420 3300014968 Bacteria 2900
107 Ga0157376_10005068 3300014969 Bacteria 9190
108 Ga0157376_10006877 3300014969 Bacteria 8055
109 Ga0157376_10039404 3300014969 Bacteria 3853
110 Ga0163161_10035916 3300017792 Bacteria 3548
111 Ga0213873_10030884 3300021358 Bacteria 1329
112 Ga0213872_10003847 3300021361 Bacteria 8157
113 Ga0224570_100298 3300022730 Bacteria 3780
114 Ga0224572_1008704 3300024225 Bacteria 1881
115 Ga0207710_10029419 3300025900 Bacteria 2391
116 Ga0207710_10083260 3300025900 Bacteria 1487
117 Ga0207688_10041052 3300025901 Bacteria 2572
118 Ga0207680_10036445 3300025903 Bacteria 2833
119 Ga0207645_10060950 3300025907 Bacteria 2410
120 Ga0207705_10037580 3300025909 Bacteria 3465
121 Ga0207684_10008585 3300025910 Bacteria 9084
122 Ga0207684_10014045 3300025910 Bacteria 6917
123 Ga0207695_10000103 3300025913 Bacteria 257354
124 Ga0207695_10168769 3300025913 Bacteria 2115
125 Ga0207671_10033830 3300025914 Bacteria 3801
126 Ga0207693_10011639 3300025915 Bacteria 7117
127 Ga0207663_10057619 3300025916 Bacteria 2449
128 Ga0207663_10078429 3300025916 Bacteria 2153
129 Ga0207657_10001385 3300025919 Bacteria 25874
130 Ga0207657_10154009 3300025919 Bacteria 1870
131 Ga0207646_10264380 3300025922 Bacteria 1555
132 Ga0207659_10072632 3300025926 Bacteria 2516
133 Ga0207687_10003254 3300025927 Bacteria 11003
134 Ga0207644_10066069 3300025931 Bacteria 2632
135 Ga0207644_10320281 3300025931 Bacteria 1254
136 Ga0207686_10005912 3300025934 Bacteria 6570
137 Ga0207670_10171177 3300025936 Bacteria 1629
138 Ga0207704_10042000 3300025938 Bacteria 2688
139 Ga0207711_10047868 3300025941 Bacteria 3657
140 Ga0207711_10107417 3300025941 Bacteria 2478
141 Ga0207689_10040872 3300025942 Bacteria 3836
142 Ga0207661_10020518 3300025944 Bacteria 4940
143 Ga0207679_10003683 3300025945 Bacteria 9499
144 Ga0207667_10003797 3300025949 Bacteria 18593
145 Ga0207667_10004175 3300025949 Bacteria 17743
146 Ga0207677_10076141 3300026023 Bacteria 2387
147 Ga0207677_10096720 3300026023 Bacteria 2161
148 Ga0207703_10018504 3300026035 Bacteria 5439
149 Ga0207703_10019491 3300026035 Bacteria 5302
150 Ga0207703_10121116 3300026035 Bacteria 2246
151 Ga0207678_10012936 3300026067 Bacteria 7323
152 Ga0207641_10000521 3300026088 Bacteria 43168
153 Ga0207648_10141242 3300026089 Bacteria 2122
154 Ga0207648_10252655 3300026089 Bacteria 1572
155 Ga0207648_10338976 3300026089 Bacteria 1353
156 Ga0207674_10003087 3300026116 Bacteria 20586
157 Ga0207683_10007183 3300026121 Bacteria 9548
158 Ga0207698_10123325 3300026142 Bacteria 2198
159 Ga0207428_10176499 3300027907 Bacteria 1615
160 Ga0265356_1000222 3300028017 Bacteria 10764
161 Ga0265357_1001309 3300028023 Bacteria 1795
162 Ga0268266_10000529 3300028379 Bacteria 53323
163 Ga0268266_10013913 3300028379 Bacteria 6927
164 Ga0268266_10540476 3300028379 Bacteria 1115
165 Ga0268264_10081801 3300028381 Bacteria 2761
166 Ga0268264_10254485 3300028381 Bacteria 1633
167 Ga0268264_10312923 3300028381 Bacteria 1482
168 Ga0307515_10019035 3300028794 Bacteria 12390
169 Ga0265338_10015618 3300028800 Bacteria 8321
170 Ga0265338_10229358 3300028800 Bacteria 1382
171 Ga0316177_1080725 3300030731 Bacteria 2007
172 Ga0316181_1293921 3300030744 Bacteria 2353
173 Ga0265762_1006011 3300030760 Unclassified 2174
174 Ga0265760_10000005 3300031090 Bacteria 144834
175 Ga0265760_10006007 3300031090 Bacteria 3470
176 Ga0265325_10000842 3300031241 Bacteria 22229
177 Ga0265339_10003997 3300031249 Bacteria 10192
178 Ga0265331_10000792 3300031250 Bacteria 26282
179 Ga0307513_10000001 3300031456 Bacteria 1660464
180 Ga0265313_10001268 3300031595 Bacteria 23991
181 Ga0265314_10000078 3300031711 Bacteria 145069
182 Ga0265342_10057759 3300031712 Bacteria 2295
183 Ga0373945_0019449 3300035116 Bacteria 2319
184 Ga0373931_0033303 3300035691 Bacteria 2670
185 Ga0373935_0052540 3300035692 Bacteria 2591
186 Ga0373925_0004909 3300037068 Bacteria 10056
187 Ga0436364_1526472 3300037853 Bacteria 10253
188 Ga0436365_0843190 3300039437 Bacteria 8691
189 Ga0436365_1298762 3300039437 Bacteria 1768
190 Ga0436362_0018242 3300039453 Bacteria 1392
191 Ga0439438_031897 3300041405 Bacteria 1399
192 Ga0439439_0027028 3300041406 Bacteria 1448
193 Ga0439449_0014618 3300042007 Bacteria 2950
194 Ga0439457_003769 3300042014 Bacteria 4070
195 Ga0451577_0041405 3300042876 Bacteria 4135
196 Ga0453683_0234729 3300044673 Bacteria 1167
197 Ga0466966_0063941 3300044684 Bacteria 2318
198 Ga0466961_0026221 3300044693 Bacteria 3748
199 Ga0466971_0006661 3300044719 Bacteria 5025
200 Ga0466971_0029157 3300044719 Bacteria 2468
201 Ga0466957_0017943 3300044842 Bacteria 4151
202 Ga0466959_0038939 3300045049 Bacteria 3513
203 Ga0451576_0126086 3300045051 Bacteria 2667
204 Ga0451576_0396376 3300045051 Bacteria 1447
205 Ga0466958_0018589 3300045836 Bacteria 4036
206 Ga0466958_0028786 3300045836 Bacteria 3296
207 Ga0495592_0040409 3300046454 Bacteria 3501
208 Ga0495603_0006017 3300046455 Bacteria 7252
209 Ga0495603_0038271 3300046455 Bacteria 2877
210 Ga0495641_0023385 3300046461 Bacteria 3071
211 Ga0495580_0000459 3300046472 Bacteria 33787
212 Ga0495582_0000284 3300046473 Bacteria 28081
213 Ga0495582_0030277 3300046473 Bacteria 2971
214 Ga0495639_0043935 3300046475 Bacteria 2019
215 Ga0495594_0005848 3300046499 Bacteria 6320
216 Ga0495618_0089040 3300046514 Bacteria 1974
217 Ga0495666_0173626 3300046526 Bacteria 996
218 Ga0495645_0130783 3300046543 Bacteria 1759
219 Ga0495635_0065796 3300046663 Bacteria 2487
220 Ga0495647_0011202 3300046681 Bacteria 3068
221 Ga0495613_0102448 3300046689 Bacteria 2067
222 Ga0495613_0116701 3300046689 Bacteria 1919
223 Ga0495613_0207295 3300046689 Bacteria 1380
224 Ga0495581_0027009 3300047315 Bacteria 3329
225 Ga0495674_0005479 3300047319 Bacteria 12193
226 Ga0495672_0057600 3300047320 Bacteria 2256
227 Ga0495676_0019246 3300047321 Bacteria 6007
228 Ga0495676_0208193 3300047321 Bacteria 1355
229 Ga0496101_0004202 3300048904 Bacteria 9022
230 Ga0496102_0001000 3300048905 Bacteria 26564
231 Ga0496103_0093622 3300048906 Bacteria 1897
232 Ga0496104_0010305 3300048907 Bacteria 8345
233 Ga0496104_0054312 3300048907 Bacteria 3786
234 Ga0496104_0083704 3300048907 Unclassified 3043
235 Ga0496106_0000465 3300048909 Bacteria 29040
236 Ga0496107_0004274 3300048910 Bacteria 9668
237 Ga0496108_0059458 3300048911 Bacteria 3213
238 Ga0496109_0011425 3300048912 Bacteria 7632
239 Ga0496109_0124504 3300048912 Bacteria 2403
240 Ga0496110_0001416 3300048913 Bacteria 17332
241 Ga0496110_0084434 3300048913 Bacteria 2834
242 Ga0496111_0003700 3300048914 Bacteria 9507
243 Ga0496112_0001832 3300048915 Bacteria 16722
244 Ga0496113_0011490 3300048916 Bacteria 5910
245 Ga0496114_0007570 3300048917 Bacteria 8589
246 Ga0496115_0022792 3300048918 Bacteria 4855
247 Ga0501032_0000359 3300049569 Bacteria 37996
248 Ga0501033_0000072 3300049570 Bacteria 95370
249 Ga0501038_0000359 3300049574 Bacteria 39223
250 Ga0501067_0013871 3300049583 Bacteria 4461
251 Ga0501072_0042946 3300049588 Bacteria 3553
252 Ga0501073_0000276 3300049589 Bacteria 33990
253 Ga0501074_0000182 3300049590 Bacteria 33963
254 Ga0501074_0003515 3300049590 Bacteria 11124
255 Ga0501079_0135521 3300049741 Bacteria 1917
256 Ga0501080_0075441 3300049742 Bacteria 3136
257 Ga0501080_0078642 3300049742 Bacteria 3067
258 nmdc:mga05p37_41393_c1 3300050507 Bacteria 5656
259 nmdc:mga05p37_597_c1 3300050507 Bacteria 37256
260 nmdc:mga08y16_304797_c1 3300050511 Bacteria 1641
261 nmdc:mga08y16_7462_c1 3300050511 Bacteria 11454
262 nmdc:mga0n895_119592_c1 3300050512 Bacteria 2655
263 nmdc:mga0n895_12725_c1 3300050512 Bacteria 7555
264 nmdc:mga0n895_205927_c1 3300050512 Bacteria 1998
265 nmdc:mga0n895_34294_c1 3300050512 Bacteria 4884
266 nmdc:mga0n895_4569_c1 3300050512 Bacteria 11399
267 nmdc:mga0n895_65826_c1 3300050512 Unclassified 3588
268 nmdc:mga0rr50_2298_c1 3300050513 Bacteria 10725
269 nmdc:mga0rr50_35033_c1 3300050513 Bacteria 3124
270 nmdc:mga08x19_58455_c1 3300050514 Bacteria 2494
271 nmdc:mga0a205_267731_c1 3300050515 Bacteria 1586
272 nmdc:mga0a205_413768_c1 3300050515 Bacteria 1211
273 nmdc:mga0a205_7259_c1 3300050515 Bacteria 10023
274 Ga0495601_0000353 3300053077 Bacteria 24084
275 Ga0495612_0023070 3300053078 Bacteria 2494
276 Ga0495619_0254730 3300053085 Bacteria 1216
277 Ga0500616_0002341 3300053153 Bacteria 15961
278 Ga0501082_0274053 3300060353 Bacteria 1469

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046526 Ga0495666_0173626 Ga0495666_0173626_82_972 296
2 3300026142 Ga0207698_10123325 Ga0207698_101233251 299
3 3300013297 Ga0157378_10325553 Ga0157378_103255532 300
4 3300027907 Ga0207428_10176499 Ga0207428_101764992 300
5 3300050511 nmdc:mga08y16_304797_c1 nmdc:mga08y16_304797_c1_365_1354 300
6 3300046689 Ga0495613_0102448 Ga0495613_0102448_1132_2052 302
7 3300005468 Ga0070707_100175291 Ga0070707_1001752912 306
8 3300025922 Ga0207646_10264380 Ga0207646_102643802 306
9 3300025931 Ga0207644_10320281 Ga0207644_103202811 306
10 3300039453 Ga0436362_0018242 Ga0436362_0018242_324_1340 306
11 3300047321 Ga0495676_0208193 Ga0495676_0208193_247_1335 307
12 3300026089 Ga0207648_10252655 Ga0207648_102526552 310
13 3300021358 Ga0213873_10030884 Ga0213873_100308841 311
14 3300047320 Ga0495672_0057600 Ga0495672_0057600_621_1610 314
15 3300009094 Ga0111539_10001992 Ga0111539_1000199210 315
16 3300044684 Ga0466966_0063941 Ga0466966_0063941_1024_2007 315
17 3300044693 Ga0466961_0026221 Ga0466961_0026221_2440_3423 315
18 3300044719 Ga0466971_0006661 Ga0466971_0006661_2231_3214 315
19 3300044719 Ga0466971_0029157 Ga0466971_0029157_842_1825 315
20 3300044842 Ga0466957_0017943 Ga0466957_0017943_2361_3344 315
21 3300045049 Ga0466959_0038939 Ga0466959_0038939_775_1758 315
22 3300045836 Ga0466958_0018589 Ga0466958_0018589_2511_3494 315
23 3300045836 Ga0466958_0028786 Ga0466958_0028786_977_1960 315
24 3300050507 nmdc:mga05p37_597_c1 nmdc:mga05p37_597_c1_4844_5818 315
25 3300050511 nmdc:mga08y16_7462_c1 nmdc:mga08y16_7462_c1_5454_6473 315
26 3300050512 nmdc:mga0n895_12725_c1 nmdc:mga0n895_12725_c1_6355_7329 315
27 3300050515 nmdc:mga0a205_7259_c1 nmdc:mga0a205_7259_c1_4278_5252 315
28 3300028800 Ga0265338_10229358 Ga0265338_102293581 317
29 3300053085 Ga0495619_0254730 Ga0495619_0254730_171_1169 318
30 3300005468 Ga0070707_100444405 Ga0070707_1004444052 319
31 3300005339 Ga0070660_100165193 Ga0070660_1001651933 320
32 3300025909 Ga0207705_10037580 Ga0207705_100375802 320
33 3300025919 Ga0207657_10154009 Ga0207657_101540093 320
34 iso_pu_bacteria 2861520306 2861520973 320
35 iso_pu_bacteria 8056054917 8056055117 320
36 iso_pu_bacteria 8057568493 8057568630 320
37 3300048912 Ga0496109_0124504 Ga0496109_0124504_1165_2136 321
38 3300049590 Ga0501074_0003515 Ga0501074_0003515_8145_9119 322
39 3300005468 Ga0070707_100468597 Ga0070707_1004685972 323
40 3300028794 Ga0307515_10019035 Ga0307515_100190356 323
41 3300049569 Ga0501032_0000359 Ga0501032_0000359_18594_19574 323
42 3300049570 Ga0501033_0000072 Ga0501033_0000072_18613_19593 323
43 3300053153 Ga0500616_0002341 Ga0500616_0002341_7066_8061 323
44 3300005544 Ga0070686_100006092 Ga0070686_1000060923 324
45 3300014325 Ga0163163_10174774 Ga0163163_101747742 324
46 3300025910 Ga0207684_10008585 Ga0207684_100085854 324
47 3300025910 Ga0207684_10014045 Ga0207684_100140453 324
48 3300028023 Ga0265357_1001309 Ga0265357_10013091 324
49 3300030731 Ga0316177_1080725 Ga0316177_10807252 324
50 3300030744 Ga0316181_1293921 Ga0316181_12939212 324
51 3300031456 Ga0307513_10000001 Ga0307513_100000011368 324
52 3300041405 Ga0439438_031897 Ga0439438_031897_127_1110 324
53 3300041406 Ga0439439_0027028 Ga0439439_0027028_265_1248 324
54 3300042007 Ga0439449_0014618 Ga0439449_0014618_1766_2749 324
55 3300042014 Ga0439457_003769 Ga0439457_003769_1119_2102 324
56 3300042876 Ga0451577_0041405 Ga0451577_0041405_2365_3339 324
57 3300044673 Ga0453683_0234729 Ga0453683_0234729_16_990 324
58 3300045051 Ga0451576_0126086 Ga0451576_0126086_567_1541 324
59 3300035692 Ga0373935_0052540 Ga0373935_0052540_482_1495 325
60 3300050507 nmdc:mga05p37_41393_c1 nmdc:mga05p37_41393_c1_2266_3246 325
61 3300006846 Ga0075430_100158853 Ga0075430_1001588532 326
62 3300005471 Ga0070698_100172263 Ga0070698_1001722631 327
63 3300028800 Ga0265338_10015618 Ga0265338_100156185 327
64 3300031241 Ga0265325_10000842 Ga0265325_1000084212 327
65 3300031249 Ga0265339_10003997 Ga0265339_100039976 327
66 3300031250 Ga0265331_10000792 Ga0265331_1000079213 327
67 3300031595 Ga0265313_10001268 Ga0265313_1000126812 327
68 3300031711 Ga0265314_10000078 Ga0265314_10000078104 327
69 3300031712 Ga0265342_10057759 Ga0265342_100577591 327
70 3300049742 Ga0501080_0075441 Ga0501080_0075441_205_1197 327
71 3300005563 Ga0068855_100010773 Ga0068855_1000107737 328
72 3300014969 Ga0157376_10006877 Ga0157376_100068772 328
73 3300025934 Ga0207686_10005912 Ga0207686_100059124 328
74 3300025941 Ga0207711_10047868 Ga0207711_100478682 328
75 3300025949 Ga0207667_10003797 Ga0207667_100037972 328
76 3300026035 Ga0207703_10019491 Ga0207703_100194912 328
77 3300026089 Ga0207648_10338976 Ga0207648_103389762 328
78 3300028379 Ga0268266_10013913 Ga0268266_100139132 328
79 3300028381 Ga0268264_10081801 Ga0268264_100818012 328
80 3300037853 Ga0436364_1526472 Ga0436364_1526472_7474_8463 328
81 3300039437 Ga0436365_0843190 Ga0436365_0843190_5913_6902 328
82 3300039437 Ga0436365_1298762 Ga0436365_1298762_243_1232 328
83 3300048907 Ga0496104_0054312 Ga0496104_0054312_1783_2793 328
84 3300049588 Ga0501072_0042946 Ga0501072_0042946_542_1534 328
85 3300049741 Ga0501079_0135521 Ga0501079_0135521_625_1617 328
86 3300060353 Ga0501082_0274053 Ga0501082_0274053_299_1291 328
87 3300021361 Ga0213872_10003847 Ga0213872_100038475 329
88 3300005334 Ga0068869_100025265 Ga0068869_1000252654 330
89 3300005335 Ga0070666_10021051 Ga0070666_100210513 330
90 3300005337 Ga0070682_100013051 Ga0070682_1000130513 330
91 3300005338 Ga0068868_100005806 Ga0068868_1000058065 330
92 3300005339 Ga0070660_100002738 Ga0070660_10000273810 330
93 3300005353 Ga0070669_100172609 Ga0070669_1001726092 330
94 3300005365 Ga0070688_100151848 Ga0070688_1001518482 330
95 3300005366 Ga0070659_100027608 Ga0070659_1000276085 330
96 3300005367 Ga0070667_100077739 Ga0070667_1000777393 330
97 3300005438 Ga0070701_10122180 Ga0070701_101221802 330
98 3300005439 Ga0070711_100076670 Ga0070711_1000766702 330
99 3300005444 Ga0070694_100218919 Ga0070694_1002189192 330
100 3300005456 Ga0070678_100029042 Ga0070678_1000290423 330
101 3300005456 Ga0070678_100098059 Ga0070678_1000980592 330
102 3300005457 Ga0070662_100042307 Ga0070662_1000423072 330
103 3300005466 Ga0070685_10056492 Ga0070685_100564922 330
104 3300005544 Ga0070686_100101495 Ga0070686_1001014952 330
105 3300005563 Ga0068855_100003470 Ga0068855_1000034705 330
106 3300005563 Ga0068855_100021721 Ga0068855_1000217212 330
107 3300005614 Ga0068856_100001996 Ga0068856_10000199611 330
108 3300005615 Ga0070702_100039749 Ga0070702_1000397491 330
109 3300005618 Ga0068864_100067935 Ga0068864_1000679351 330
110 3300005719 Ga0068861_100226109 Ga0068861_1002261092 330
111 3300005842 Ga0068858_100166572 Ga0068858_1001665722 330
112 3300006871 Ga0075434_100000124 Ga0075434_10000012426 330
113 3300006914 Ga0075436_100068630 Ga0075436_1000686302 330
114 3300007076 Ga0075435_100001161 Ga0075435_10000116110 330
115 3300009098 Ga0105245_10007657 Ga0105245_100076577 330
116 3300009101 Ga0105247_10007819 Ga0105247_100078194 330
117 3300009148 Ga0105243_10091537 Ga0105243_100915373 330
118 3300009174 Ga0105241_10059996 Ga0105241_100599962 330
119 3300009176 Ga0105242_10037844 Ga0105242_100378443 330
120 3300009177 Ga0105248_10189651 Ga0105248_101896512 330
121 3300009545 Ga0105237_10035469 Ga0105237_100354696 330
122 3300009551 Ga0105238_10000468 Ga0105238_1000046840 330
123 3300010375 Ga0105239_10037114 Ga0105239_100371145 330
124 3300011119 Ga0105246_10010928 Ga0105246_100109283 330
125 3300013105 Ga0157369_10100914 Ga0157369_101009142 330
126 3300013296 Ga0157374_10009938 Ga0157374_100099386 330
127 3300013306 Ga0163162_10042854 Ga0163162_100428545 330
128 3300013307 Ga0157372_10098241 Ga0157372_100982412 330
129 3300013308 Ga0157375_10008677 Ga0157375_100086776 330
130 3300014325 Ga0163163_10032568 Ga0163163_100325682 330
131 3300014968 Ga0157379_10081420 Ga0157379_100814205 330
132 3300014969 Ga0157376_10005068 Ga0157376_100050683 330
133 3300025900 Ga0207710_10029419 Ga0207710_100294192 330
134 3300025901 Ga0207688_10041052 Ga0207688_100410524 330
135 3300025903 Ga0207680_10036445 Ga0207680_100364453 330
136 3300025907 Ga0207645_10060950 Ga0207645_100609502 330
137 3300025914 Ga0207671_10033830 Ga0207671_100338302 330
138 3300025916 Ga0207663_10057619 Ga0207663_100576193 330
139 3300025919 Ga0207657_10001385 Ga0207657_100013857 330
140 3300025927 Ga0207687_10003254 Ga0207687_100032545 330
141 3300025941 Ga0207711_10107417 Ga0207711_101074172 330
142 3300025942 Ga0207689_10040872 Ga0207689_100408724 330
143 3300025949 Ga0207667_10004175 Ga0207667_1000417514 330
144 3300026023 Ga0207677_10076141 Ga0207677_100761412 330
145 3300026035 Ga0207703_10121116 Ga0207703_101211161 330
146 3300026121 Ga0207683_10007183 Ga0207683_100071834 330
147 3300035116 Ga0373945_0019449 Ga0373945_0019449_751_1746 330
148 3300037068 Ga0373925_0004909 Ga0373925_0004909_1449_2444 330
149 3300046455 Ga0495603_0006017 Ga0495603_0006017_5833_6828 330
150 3300046461 Ga0495641_0023385 Ga0495641_0023385_1317_2312 330
151 3300046473 Ga0495582_0030277 Ga0495582_0030277_1061_2056 330
152 3300046475 Ga0495639_0043935 Ga0495639_0043935_373_1368 330
153 3300046663 Ga0495635_0065796 Ga0495635_0065796_1024_2019 330
154 3300046681 Ga0495647_0011202 Ga0495647_0011202_1540_2535 330
155 3300046689 Ga0495613_0207295 Ga0495613_0207295_76_1071 330
156 3300047319 Ga0495674_0005479 Ga0495674_0005479_765_1760 330
157 3300047321 Ga0495676_0019246 Ga0495676_0019246_1495_2490 330
158 3300048904 Ga0496101_0004202 Ga0496101_0004202_1485_2480 330
159 3300048905 Ga0496102_0001000 Ga0496102_0001000_1362_2357 330
160 3300048906 Ga0496103_0093622 Ga0496103_0093622_886_1881 330
161 3300048907 Ga0496104_0010305 Ga0496104_0010305_4491_5486 330
162 3300048909 Ga0496106_0000465 Ga0496106_0000465_3218_4213 330
163 3300048910 Ga0496107_0004274 Ga0496107_0004274_5289_6284 330
164 3300048911 Ga0496108_0059458 Ga0496108_0059458_123_1118 330
165 3300048912 Ga0496109_0011425 Ga0496109_0011425_6515_7510 330
166 3300048913 Ga0496110_0001416 Ga0496110_0001416_14114_15109 330
167 3300048914 Ga0496111_0003700 Ga0496111_0003700_2081_3076 330
168 3300048915 Ga0496112_0001832 Ga0496112_0001832_6367_7362 330
169 3300048916 Ga0496113_0011490 Ga0496113_0011490_2498_3493 330
170 3300048917 Ga0496114_0007570 Ga0496114_0007570_6188_7183 330
171 3300048918 Ga0496115_0022792 Ga0496115_0022792_589_1584 330
172 3300050512 nmdc:mga0n895_4569_c1 nmdc:mga0n895_4569_c1_7579_8574 330
173 3300050513 nmdc:mga0rr50_2298_c1 nmdc:mga0rr50_2298_c1_5374_6369 330
174 3300050514 nmdc:mga08x19_58455_c1 nmdc:mga08x19_58455_c1_1006_2001 330
175 3300050515 nmdc:mga0a205_267731_c1 nmdc:mga0a205_267731_c1_338_1333 330
176 3300053077 Ga0495601_0000353 Ga0495601_0000353_4324_5319 330
177 3300053078 Ga0495612_0023070 Ga0495612_0023070_1030_2025 330
178 3300013306 Ga0163162_10002124 Ga0163162_100021244 331
179 3300031090 Ga0265760_10000005 Ga0265760_1000000541 331
180 3300049574 Ga0501038_0000359 Ga0501038_0000359_6771_7769 331
181 3300049583 Ga0501067_0013871 Ga0501067_0013871_418_1416 331
182 3300049589 Ga0501073_0000276 Ga0501073_0000276_6791_7789 331
183 3300049590 Ga0501074_0000182 Ga0501074_0000182_26176_27174 331
184 3300005334 Ga0068869_100083347 Ga0068869_1000833473 332
185 3300005842 Ga0068858_100023134 Ga0068858_1000231344 332
186 3300009147 Ga0114129_10027489 Ga0114129_100274894 332
187 3300013308 Ga0157375_10214454 Ga0157375_102144542 332
188 3300026035 Ga0207703_10018504 Ga0207703_100185042 332
189 3300006852 Ga0075433_10023753 Ga0075433_100237532 333
190 3300005445 Ga0070708_100223999 Ga0070708_1002239992 334
191 3300005536 Ga0070697_100263087 Ga0070697_1002630871 334
192 3300005548 Ga0070665_100006659 Ga0070665_10000665911 334
193 3300005548 Ga0070665_100024928 Ga0070665_1000249286 334
194 3300005841 Ga0068863_100001549 Ga0068863_10000154911 334
195 3300005842 Ga0068858_100012760 Ga0068858_1000127608 334
196 3300005843 Ga0068860_100148897 Ga0068860_1001488972 334
197 3300005843 Ga0068860_100267462 Ga0068860_1002674622 334
198 3300006852 Ga0075433_10211084 Ga0075433_102110842 334
199 3300006852 Ga0075433_10397458 Ga0075433_103974581 334
200 3300006871 Ga0075434_100012993 Ga0075434_1000129935 334
201 3300006871 Ga0075434_100026635 Ga0075434_1000266353 334
202 3300006871 Ga0075434_100097798 Ga0075434_1000977982 334
203 3300007076 Ga0075435_100009305 Ga0075435_1000093053 334
204 3300007076 Ga0075435_100057938 Ga0075435_1000579382 334
205 3300009093 Ga0105240_10000056 Ga0105240_1000005697 334
206 3300009093 Ga0105240_10021640 Ga0105240_100216404 334
207 3300009101 Ga0105247_10065076 Ga0105247_100650762 334
208 3300009176 Ga0105242_10003808 Ga0105242_100038083 334
209 3300009545 Ga0105237_10276083 Ga0105237_102760832 334
210 3300009553 Ga0105249_10248850 Ga0105249_102488502 334
211 3300013297 Ga0157378_10041801 Ga0157378_100418013 334
212 3300013308 Ga0157375_10199513 Ga0157375_101995132 334
213 3300022730 Ga0224570_100298 Ga0224570_1002982 334
214 3300024225 Ga0224572_1008704 Ga0224572_10087041 334
215 3300025900 Ga0207710_10083260 Ga0207710_100832601 334
216 3300025913 Ga0207695_10000103 Ga0207695_1000010398 334
217 3300025913 Ga0207695_10168769 Ga0207695_101687692 334
218 3300025915 Ga0207693_10011639 Ga0207693_100116393 334
219 3300025916 Ga0207663_10078429 Ga0207663_100784293 334
220 3300026088 Ga0207641_10000521 Ga0207641_1000052111 334
221 3300028017 Ga0265356_1000222 Ga0265356_10002221 334
222 3300028379 Ga0268266_10000529 Ga0268266_1000052948 334
223 3300028379 Ga0268266_10540476 Ga0268266_105404761 334
224 3300028381 Ga0268264_10254485 Ga0268264_102544851 334
225 3300030760 Ga0265762_1006011 Ga0265762_10060112 334
226 3300031090 Ga0265760_10006007 Ga0265760_100060072 334
227 3300035691 Ga0373931_0033303 Ga0373931_0033303_561_1586 334
228 3300045051 Ga0451576_0396376 Ga0451576_0396376_42_1094 334
229 3300046454 Ga0495592_0040409 Ga0495592_0040409_1897_2919 334
230 3300046455 Ga0495603_0038271 Ga0495603_0038271_1166_2200 334
231 3300046472 Ga0495580_0000459 Ga0495580_0000459_3219_4244 334
232 3300046473 Ga0495582_0000284 Ga0495582_0000284_663_1688 334
233 3300046499 Ga0495594_0005848 Ga0495594_0005848_2948_3982 334
234 3300046514 Ga0495618_0089040 Ga0495618_0089040_144_1166 334
235 3300047315 Ga0495581_0027009 Ga0495581_0027009_1957_2991 334
236 3300049742 Ga0501080_0078642 Ga0501080_0078642_1858_2862 334
237 3300050512 nmdc:mga0n895_119592_c1 nmdc:mga0n895_119592_c1_107_1216 334
238 3300050512 nmdc:mga0n895_205927_c1 nmdc:mga0n895_205927_c1_526_1551 334
239 3300050512 nmdc:mga0n895_34294_c1 nmdc:mga0n895_34294_c1_3815_4840 334
240 3300050512 nmdc:mga0n895_65826_c1 nmdc:mga0n895_65826_c1_532_1554 334
241 3300050513 nmdc:mga0rr50_35033_c1 nmdc:mga0rr50_35033_c1_463_1572 334
242 3300050515 nmdc:mga0a205_413768_c1 nmdc:mga0a205_413768_c1_99_1124 334
243 3300046543 Ga0495645_0130783 Ga0495645_0130783_169_1218 335
244 3300005329 Ga0070683_100000415 Ga0070683_1000004156 336
245 3300005331 Ga0070670_100009583 Ga0070670_1000095831 336
246 3300005338 Ga0068868_100026612 Ga0068868_1000266122 336
247 3300005340 Ga0070689_100111138 Ga0070689_1001111381 336
248 3300005344 Ga0070661_100013874 Ga0070661_1000138745 336
249 3300005354 Ga0070675_100374873 Ga0070675_1003748731 336
250 3300005455 Ga0070663_100423308 Ga0070663_1004233081 336
251 3300005535 Ga0070684_100000372 Ga0070684_1000003727 336
252 3300005543 Ga0070672_100261689 Ga0070672_1002616891 336
253 3300005564 Ga0070664_100000856 Ga0070664_10000085611 336
254 3300005577 Ga0068857_100027412 Ga0068857_1000274123 336
255 3300005617 Ga0068859_100368138 Ga0068859_1003681382 336
256 3300005841 Ga0068863_100467045 Ga0068863_1004670452 336
257 3300005843 Ga0068860_100458018 Ga0068860_1004580182 336
258 3300006358 Ga0068871_100091021 Ga0068871_1000910211 336
259 3300006931 Ga0097620_100368136 Ga0097620_1003681362 336
260 3300009174 Ga0105241_10285216 Ga0105241_102852161 336
261 3300009176 Ga0105242_10270803 Ga0105242_102708031 336
262 3300011119 Ga0105246_10028139 Ga0105246_100281392 336
263 3300013296 Ga0157374_10000759 Ga0157374_1000075922 336
264 3300013308 Ga0157375_10352499 Ga0157375_103524992 336
265 3300014325 Ga0163163_10001491 Ga0163163_100014914 336
266 3300014969 Ga0157376_10039404 Ga0157376_100394043 336
267 3300017792 Ga0163161_10035916 Ga0163161_100359162 336
268 3300025926 Ga0207659_10072632 Ga0207659_100726323 336
269 3300025931 Ga0207644_10066069 Ga0207644_100660692 336
270 3300025936 Ga0207670_10171177 Ga0207670_101711771 336
271 3300025938 Ga0207704_10042000 Ga0207704_100420002 336
272 3300025944 Ga0207661_10020518 Ga0207661_100205184 336
273 3300025945 Ga0207679_10003683 Ga0207679_100036836 336
274 3300026023 Ga0207677_10096720 Ga0207677_100967202 336
275 3300026067 Ga0207678_10012936 Ga0207678_100129365 336
276 3300026089 Ga0207648_10141242 Ga0207648_101412422 336
277 3300026116 Ga0207674_10003087 Ga0207674_1000308719 336
278 3300028381 Ga0268264_10312923 Ga0268264_103129231 336
279 3300046689 Ga0495613_0116701 Ga0495613_0116701_126_1310 336
280 3300048907 Ga0496104_0083704 Ga0496104_0083704_1823_2878 336
281 3300048913 Ga0496110_0084434 Ga0496110_0084434_1722_2732 336

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

36

280

0.86

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

37

343

0.82

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

37

222

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2c5a-assembly1.cif.gz_B gdp-mannose-3', 5' -epimerase (arabidopsis thaliana),y174f, with gdp-beta-l-galactose bound in the active site 0.9271 1 332
2c54-assembly1.cif.gz_B gdp-mannose-3', 5' -epimerase (arabidopsis thaliana),k178r, with gdp-beta-l-gulose and gdp-4-keto-beta-l-gulose bound in active site. 0.9232 1 332
2c59-assembly1.cif.gz_B gdp-mannose-3', 5' -epimerase (arabidopsis thaliana), with gdp-alpha-d-mannose and gdp-beta-l-galactose bound in the active site. 0.9224 1 332
2c5e-assembly1.cif.gz_B gdp-mannose-3', 5' -epimerase (arabidopsis thaliana), k217a, with gdp-alpha-d-mannose bound in the active site. 0.9223 1 332
4zrn-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (tm0509) with udp-glucose from hyperthermophilic eubacterium thermotoga maritima 0.9119 4 318
ID Description Score Start End Superfamily
2c59B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9451 4 302 3.40.50.720
af_Q93VR3_28_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9378 4 299 3.40.50.720
2c59B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.935 4 302 3.40.50.720
af_Q93VR3_28_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9285 4 299 3.40.50.720
2p5yA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8978 4 249 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3N5UCA1-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9703 2 283 GO:0006012
GO:0016853
AF-A0A380TDU8-F1-model_v4 Nucleoside-diphosphate-sugar epimerase 0.9702 2 323 GO:0016020
AF-X1J0X5-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9686 113 322
AF-A0A848X053-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9677 2 291
AF-A0A2V5T1R3-F1-model_v4 NAD-dependent dehydratase 0.9658 23 323 GO:0050577

Feature Viewer

pLDDT pTM Quality
89.19 0.89 High
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Predicted Structure (AlphaFold2)

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