F382635

General Info

Members Datasets Scaffolds Average Seq Length
278 228 181 483

Family's Representative Sequence

Representative Sequence 3300048925|Ga0496122_0000429|Ga0496122_0000429_59188_60729
Length 513
Sequence MADKAPETMETLSAKADTNFPAAHYPEVAMSKETDKQFVKEITSQSEDFSRWYLDVIKKADLMSYSPVRGCIVFKPDSYEIWELCQRFLDARFKETGHRNAYFPLFIPESFFQKEKDHIEGFNPELPWVTEAGGEKLEERLAIRPTSETMIGHMYAEWINSYRDLPMLINQWANVVRWEKRTQPFLRTSEFLWQEGHTAHEDEADARKETMQMLDIYRDFVENVLAIPVIVGQKTPSEKFAGAVDTYSIEAMMKDGKAVQAGTSHYLGTNFAVAFDIKYLNRDNVHTFAHTTSWGVSTRLIGAIIMVHGDDRGLVLPPKVAPTQVVMIPVGPPKTREAVVERIRELQAELKDAGIRVKVDDDTNQSPGWKFNEYEMRGIPLRIELGPRDMENGQVVVVTRVTGEKQVISQENLAAQVAALLDGAHEAMFLKAKQFRDERFSSVDTLEELSGFLEDTKGFALAGWCGSNACEAQVKEETGATSRNIPFDPHEHKKTCLVCGEAASHTVVFGRAY

Samples

Sample ID Description Type Environment
1 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
2 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
3 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
4 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
5 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
6 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
7 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
8 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
9 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
10 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
11 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
12 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
13 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
14 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
15 2671180694 Paenibacillus sp. A3 Isolate Unclassified
16 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
17 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
18 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
19 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
20 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
21 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
22 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
23 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
24 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
25 2818991459 Paenibacillus sp. 597 Isolate Unclassified
26 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
27 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
28 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
29 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
30 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
31 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
32 2857472729 Cohnella sp. R-74144 Isolate Unclassified
33 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
34 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
35 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
36 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
37 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
38 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
39 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
40 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
41 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
42 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
43 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
44 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
45 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
46 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
47 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
48 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
49 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
50 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
51 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
52 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
53 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
54 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
55 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
56 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
57 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
58 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
59 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
60 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
61 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
62 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
63 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
64 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
65 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
66 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
67 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
68 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
69 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
70 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
71 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
72 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
73 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
74 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
75 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
76 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
77 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
78 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
79 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
80 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
81 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
82 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
83 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
84 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
85 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
86 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
87 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
88 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
89 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
90 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
91 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
92 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
93 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
94 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
95 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
96 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
97 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
98 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
99 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
100 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
101 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
102 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
103 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
104 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
105 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
106 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
107 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
108 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
109 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
110 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
111 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
112 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
113 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
114 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
115 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
116 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
117 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
118 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
119 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
120 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
121 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
122 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
123 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
124 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
125 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
126 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
127 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
128 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
129 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
130 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
131 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
132 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
133 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
134 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
135 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
136 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
139 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
140 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
141 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
142 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
143 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
144 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
160 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
165 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
166 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
167 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
168 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
169 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
170 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
171 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
172 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
173 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
174 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
175 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
176 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
177 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
178 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
179 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
180 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
181 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
182 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
183 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
184 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
185 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
186 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
187 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
188 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
189 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
190 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
191 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
192 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
193 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
194 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
195 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
196 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
197 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
198 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
199 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
200 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
201 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
202 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
203 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
204 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
205 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
206 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
207 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
208 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
209 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
210 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
211 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
212 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
214 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
215 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
216 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
217 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
218 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
219 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
220 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
221 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
222 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
223 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
224 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
225 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
226 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
227 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
228 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 64.75
Metatranscriptomes 0.36
Isolates 34.89

Biome Distribution

Category Percentage (%)
Aerial Root 0.72
Bulb 0
Endosphere 7.55
Nodule 0.72
Rhizoplane 3.6
Rhizosphere 60.43
Stem 0
Stem Tuber 0
Unclassified 26.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1005833 3300003578 Bacteria 5490
2 Ga0055538_1000195 3300003751 Bacteria 36745
3 Ga0055532_1000380 3300003758 Bacteria 22834
4 Ga0055535_1002959 3300003761 Bacteria 5244
5 Ga0055541_1001772 3300003841 Bacteria 4528
6 Ga0070676_10003104 3300005328 Bacteria 8586
7 Ga0070690_100023617 3300005330 Bacteria 3773
8 Ga0070670_100068595 3300005331 Bacteria 3043
9 Ga0070691_10015292 3300005341 Bacteria 3526
10 Ga0070668_100053812 3300005347 Bacteria 3103
11 Ga0070674_100005808 3300005356 Bacteria 7167
12 Ga0070714_100029532 3300005435 Bacteria 4558
13 Ga0070705_100014368 3300005440 Bacteria 4070
14 Ga0070700_100022843 3300005441 Bacteria 3653
15 Ga0070694_100053288 3300005444 Bacteria 2737
16 Ga0068867_100005853 3300005459 Bacteria 8720
17 Ga0070706_100002705 3300005467 Bacteria 17737
18 Ga0070707_100050870 3300005468 Bacteria 3972
19 Ga0070707_100089749 3300005468 Bacteria 2974
20 Ga0070698_100009872 3300005471 Bacteria 10206
21 Ga0070684_100066671 3300005535 Bacteria 3160
22 Ga0070697_100068205 3300005536 Bacteria 2911
23 Ga0070697_100155233 3300005536 Bacteria 1931
24 Ga0070686_100001788 3300005544 Bacteria 11989
25 Ga0070695_100018240 3300005545 Bacteria 4260
26 Ga0070665_100047163 3300005548 Bacteria 4325
27 Ga0070704_100052424 3300005549 Bacteria 2878
28 Ga0070702_100001503 3300005615 Bacteria 9580
29 Ga0068859_100079559 3300005617 Bacteria 3318
30 Ga0068859_100113366 3300005617 Bacteria 2775
31 Ga0068861_100064006 3300005719 Bacteria 2828
32 Ga0068861_100073297 3300005719 Bacteria 2660
33 Ga0068861_100085143 3300005719 Bacteria 2482
34 Ga0068861_100089635 3300005719 Bacteria 2424
35 Ga0068858_100012813 3300005842 Bacteria 7906
36 Ga0097621_100008459 3300006237 Bacteria 7415
37 Ga0097621_100030653 3300006237 Bacteria 4260
38 Ga0068871_100004321 3300006358 Bacteria 9870
39 Ga0068871_100042691 3300006358 Bacteria 3642
40 Ga0068871_100060755 3300006358 Bacteria 3083
41 Ga0075431_100256707 3300006847 Bacteria 1775
42 Ga0075434_100197281 3300006871 Bacteria 2033
43 Ga0097620_100079561 3300006931 Bacteria 3318
44 Ga0097620_100113365 3300006931 Bacteria 2775
45 Ga0075435_100001687 3300007076 Bacteria 14347
46 Ga0105244_10004292 3300009036 Bacteria 9867
47 Ga0105244_10032511 3300009036 Bacteria 2761
48 Ga0105240_10012965 3300009093 Bacteria 11482
49 Ga0111539_10014701 3300009094 Bacteria 9767
50 Ga0105245_10025695 3300009098 Bacteria 5178
51 Ga0105245_10137713 3300009098 Bacteria 2296
52 Ga0105247_10007764 3300009101 Bacteria 6564
53 Ga0114129_10031083 3300009147 Bacteria 7552
54 Ga0105242_10014843 3300009176 Bacteria 6034
55 Ga0105242_10081934 3300009176 Bacteria 2699
56 Ga0105248_10049492 3300009177 Bacteria 4713
57 Ga0105246_10014382 3300011119 Bacteria 4977
58 Ga0157372_10232037 3300013307 Bacteria 2140
59 Ga0163163_10007691 3300014325 Bacteria 9522
60 Ga0163163_10014076 3300014325 Bacteria 7345
61 Ga0182005_1000176 3300015265 Bacteria 43754
62 Ga0213876_10009042 3300021384 Bacteria 5365
63 Ga0209784_100037 3300025224 Bacteria 259956
64 Ga0209784_100081 3300025224 Bacteria 135445
65 Ga0209566_100076 3300025225 Bacteria 161921
66 Ga0209566_100118 3300025225 Bacteria 105475
67 Ga0209566_100693 3300025225 Bacteria 19615
68 Ga0209147_100029 3300025229 Bacteria 376498
69 Ga0209437_100832 3300025233 Bacteria 13469
70 Ga0209258_100613 3300025242 Bacteria 28752
71 Ga0209675_1003801 3300025291 Bacteria 6977
72 Ga0209676_1001602 3300025292 Bacteria 20127
73 Ga0209676_1006109 3300025292 Bacteria 6046
74 Ga0209676_1016973 3300025292 Bacteria 2598
75 Ga0209025_1001802 3300025294 Bacteria 25388
76 Ga0209025_1002790 3300025294 Bacteria 17629
77 Ga0209025_1006012 3300025294 Bacteria 9632
78 Ga0209025_1007806 3300025294 Bacteria 7865
79 Ga0207426_1007241 3300025302 Bacteria 4674
80 Ga0207645_10003613 3300025907 Bacteria 11702
81 Ga0207646_10167269 3300025922 Bacteria 1985
82 Ga0207681_10021938 3300025923 Bacteria 4066
83 Ga0207664_10009764 3300025929 Bacteria 6751
84 Ga0207664_10027100 3300025929 Bacteria 4340
85 Ga0207706_10047487 3300025933 Bacteria 3798
86 Ga0207706_10048105 3300025933 Bacteria 3772
87 Ga0207686_10018019 3300025934 Bacteria 3991
88 Ga0207669_10009532 3300025937 Bacteria 4632
89 Ga0207704_10047357 3300025938 Bacteria 2569
90 Ga0207691_10075930 3300025940 Bacteria 3029
91 Ga0207689_10117589 3300025942 Bacteria 2186
92 Ga0207651_10071896 3300025960 Bacteria 2454
93 Ga0207712_10066026 3300025961 Bacteria 2585
94 Ga0207668_10129109 3300025972 Bacteria 1927
95 Ga0207677_10085939 3300026023 Bacteria 2272
96 Ga0207708_10005377 3300026075 Bacteria 9436
97 Ga0207708_10014741 3300026075 Bacteria 5850
98 Ga0207648_10010052 3300026089 Bacteria 9002
99 Ga0207648_10064710 3300026089 Bacteria 3187
100 Ga0207675_100002362 3300026118 Bacteria 18685
101 Ga0207675_100045811 3300026118 Bacteria 4085
102 Ga0207675_100110235 3300026118 Bacteria 2597
103 Ga0207683_10087623 3300026121 Bacteria 2769
104 Ga0268266_10012249 3300028379 Bacteria 7420
105 Ga0268265_10036032 3300028380 Bacteria 3620
106 Ga0268265_10164016 3300028380 Bacteria 1891
107 Ga0265330_10018150 3300031235 Bacteria 3234
108 Ga0265320_10054891 3300031240 Bacteria 1920
109 Ga0307408_100000561 3300031548 Bacteria 32112
110 Ga0316579_10058856 3300031691 Bacteria 1806
111 Ga0373928_0000791 3300035084 Bacteria 6146
112 Ga0373929_0000778 3300035085 Bacteria 6209
113 Ga0373940_0004354 3300035088 Bacteria 2987
114 Ga0373949_0002047 3300035090 Bacteria 5337
115 Ga0373952_0014118 3300035092 Bacteria 1594
116 Ga0373932_0005748 3300035112 Bacteria 2919
117 Ga0373939_0000689 3300035114 Bacteria 8374
118 Ga0373941_0000529 3300035115 Bacteria 7656
119 Ga0373960_0000539 3300035121 Bacteria 7595
120 Ga0373943_0078800 3300035170 Bacteria 1685
121 Ga0373942_0001399 3300035207 Bacteria 6232
122 Ga0373961_0004157 3300035241 Bacteria 3518
123 Ga0373931_0006366 3300035691 Bacteria 5512
124 Ga0316582_0107618 3300036647 Bacteria 1853
125 Ga0436364_0375714 3300037853 Bacteria 19868
126 Ga0436364_1115226 3300037853 Bacteria 24775
127 Ga0436365_0650080 3300039437 Bacteria 1909
128 Ga0436365_1613873 3300039437 Bacteria 15614
129 Ga0436365_1645917 3300039437 Bacteria 5902
130 Ga0439436_0003318 3300041404 Bacteria 4879
131 Ga0439433_0011086 3300041999 Bacteria 1972
132 Ga0439449_0000070 3300042007 Bacteria 32061
133 Ga0439462_0000390 3300042015 Bacteria 8443
134 Ga0466969_0000367 3300044656 Bacteria 24701
135 Ga0466968_0011615 3300044735 Bacteria 3434
136 Ga0466959_0023666 3300045049 Bacteria 4546
137 Ga0496100_0032260 3300048903 Bacteria 3264
138 Ga0496104_0017896 3300048907 Bacteria 6461
139 Ga0496105_0103699 3300048908 Bacteria 2349
140 Ga0496108_0007619 3300048911 Bacteria 8767
141 Ga0496109_0036788 3300048912 Bacteria 4420
142 Ga0496110_0220279 3300048913 Bacteria 1725
143 Ga0496112_0070288 3300048915 Bacteria 3459
144 Ga0496114_0000913 3300048917 Bacteria 22113
145 Ga0496115_0074701 3300048918 Bacteria 2753
146 Ga0496116_0000796 3300048919 Bacteria 39991
147 Ga0496116_0007999 3300048919 Bacteria 9258
148 Ga0496116_0030646 3300048919 Bacteria 3860
149 Ga0496116_0035188 3300048919 Bacteria 3520
150 Ga0496116_0043937 3300048919 Bacteria 3040
151 Ga0496116_0104758 3300048919 Bacteria 1680
152 Ga0496117_0033126 3300048920 Bacteria 3911
153 Ga0496117_0089976 3300048920 Bacteria 1980
154 Ga0496118_0007193 3300048921 Bacteria 11898
155 Ga0496119_0000072 3300048922 Bacteria 153582
156 Ga0496120_0000094 3300048923 Bacteria 146405
157 Ga0496120_0087728 3300048923 Bacteria 1669
158 Ga0496121_0000007 3300048924 Bacteria 942516
159 Ga0496122_0000429 3300048925 Bacteria 88472
160 Ga0496122_0013531 3300048925 Bacteria 7978
161 Ga0496122_0038856 3300048925 Bacteria 3804
162 Ga0496123_0012141 3300048926 Bacteria 7376
163 Ga0496123_0021711 3300048926 Bacteria 4978
164 Ga0496124_0000340 3300048927 Bacteria 85365
165 Ga0496124_0002167 3300048927 Bacteria 26310
166 Ga0496124_0122033 3300048927 Bacteria 2081
167 Ga0496124_0197467 3300048927 Bacteria 1533
168 Ga0496125_0000339 3300048928 Bacteria 89561
169 Ga0496125_0002142 3300048928 Bacteria 26480
170 Ga0496125_0018312 3300048928 Bacteria 6654
171 Ga0496126_0008307 3300048929 Bacteria 11210
172 Ga0496126_0009838 3300048929 Bacteria 10121
173 Ga0496126_0010866 3300048929 Bacteria 9487
174 Ga0501034_0005360 3300049571 Bacteria 14041
175 Ga0501043_0036575 3300049579 Bacteria 3863
176 Ga0501047_0002381 3300049581 Bacteria 17984
177 Ga0501044_0006978 3300049823 Bacteria 12427
178 nmdc:mga08y16_9432_c1 3300050511 Bacteria 10235
179 nmdc:mga0n895_62945_c1 3300050512 Bacteria 3668
180 nmdc:mga0rr50_128878_c1 3300050513 Bacteria 2023
181 nmdc:mga0rr50_558_c1 3300050513 Bacteria 19971

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048913 Ga0496110_0220279 Ga0496110_0220279_412_1710 424
2 3300041999 Ga0439433_0011086 Ga0439433_0011086_44_1333 429
3 3300048927 Ga0496124_0197467 Ga0496124_0197467_47_1336 429
4 3300048903 Ga0496100_0032260 Ga0496100_0032260_14_1339 441
5 iso_pu_bacteria 8046991243 8046997942 455
6 iso_pu_bacteria 2788500588 2791213572 467
7 iso_pu_bacteria 2818991451 2819627334 467
8 iso_pu_bacteria 2881644220 2881648810 467
9 iso_pu_bacteria 2904606771 2904607689 467
10 iso_pu_bacteria 2939593269 2939596203 467
11 iso_pu_bacteria 3001267043 3001270894 467
12 iso_pu_bacteria 3001272096 3001276528 467
13 iso_pu_bacteria 8055531788 8055534529 467
14 iso_pu_bacteria 2852673933 2852673948 468
15 iso_pu_bacteria 2928510474 2928510523 468
16 iso_pu_bacteria 3006988479 3006992086 468
17 3300003751 Ga0055538_1000195 Ga0055538_100019522 471
18 3300009036 Ga0105244_10032511 Ga0105244_100325111 471
19 3300025224 Ga0209784_100081 Ga0209784_10008177 471
20 3300025292 Ga0209676_1001602 Ga0209676_10016028 471
21 3300025292 Ga0209676_1006109 Ga0209676_10061095 471
22 3300025292 Ga0209676_1016973 Ga0209676_10169732 471
23 3300025294 Ga0209025_1001802 Ga0209025_10018027 471
24 3300025294 Ga0209025_1002790 Ga0209025_10027906 471
25 3300005331 Ga0070670_100068595 Ga0070670_1000685952 472
26 3300005617 Ga0068859_100079559 Ga0068859_1000795592 472
27 3300006871 Ga0075434_100197281 Ga0075434_1001972811 472
28 3300006931 Ga0097620_100079561 Ga0097620_1000795612 472
29 3300014325 Ga0163163_10007691 Ga0163163_100076916 472
30 3300050512 nmdc:mga0n895_62945_c1 nmdc:mga0n895_62945_c1_321_1775 472
31 iso_pu_bacteria 2818991442 2819574461 472
32 iso_pu_bacteria 2821136567 2821137836 472
33 iso_pu_bacteria 2904467357 2904467413 472
34 3300031235 Ga0265330_10018150 Ga0265330_100181503 473
35 3300031691 Ga0316579_10058856 Ga0316579_100588562 473
36 3300036647 Ga0316582_0107618 Ga0316582_0107618_284_1714 473
37 3300048919 Ga0496116_0035188 Ga0496116_0035188_1136_2584 473
38 3300048925 Ga0496122_0013531 Ga0496122_0013531_2137_3585 473
39 3300048926 Ga0496123_0012141 Ga0496123_0012141_2390_3838 473
40 3300048927 Ga0496124_0002167 Ga0496124_0002167_5610_7058 473
41 3300048928 Ga0496125_0002142 Ga0496125_0002142_5915_7363 473
42 3300015265 Ga0182005_1000176 Ga0182005_100017614 474
43 3300025302 Ga0207426_1007241 Ga0207426_10072413 474
44 3300031240 Ga0265320_10054891 Ga0265320_100548912 474
45 3300031548 Ga0307408_100000561 Ga0307408_10000056112 474
46 3300048924 Ga0496121_0000007 Ga0496121_0000007_213364_214839 474
47 3300025929 Ga0207664_10009764 Ga0207664_100097647 476
48 iso_pu_bacteria 2510917027 2511180709 477
49 iso_pu_bacteria 2857460504 2857463273 477
50 iso_pu_bacteria 2857465823 2857468520 477
51 iso_pu_bacteria 2898907183 2898908262 477
52 iso_pu_bacteria 2915597211 2915599610 477
53 iso_pu_bacteria 2915606848 2915612239 477
54 iso_pu_bacteria 2929183550 2929184764 477
55 iso_pu_bacteria 2524023129 2524186325 478
56 iso_pu_bacteria 2548877040 2550906063 478
57 iso_pu_bacteria 2563366752 2563929666 478
58 iso_pu_bacteria 2571042143 2571529516 478
59 iso_pu_bacteria 2571042588 2573039816 478
60 iso_pu_bacteria 2576861424 2578337452 478
61 iso_pu_bacteria 2579778775 2580932658 478
62 iso_pu_bacteria 2585428059 2587738127 478
63 iso_pu_bacteria 2600255286 2601638492 478
64 iso_pu_bacteria 2619619294 2621275781 478
65 iso_pu_bacteria 2643221676 2644421400 478
66 iso_pu_bacteria 2721755693 2723603542 478
67 iso_pu_bacteria 2728368933 2728531580 478
68 iso_pu_bacteria 2728369359 2730139537 478
69 iso_pu_bacteria 2751185905 2753808148 478
70 iso_pu_bacteria 2791355222 2793183004 478
71 iso_pu_bacteria 2802428803 2802435940 478
72 iso_pu_bacteria 2818991459 2819670145 478
73 iso_pu_bacteria 2857453340 2857456896 478
74 iso_pu_bacteria 2857472729 2857472864 478
75 iso_pu_bacteria 2857591370 2857597077 478
76 iso_pu_bacteria 2865002811 2865005972 478
77 iso_pu_bacteria 2881636855 2881637204 478
78 iso_pu_bacteria 2888578766 2888581396 478
79 iso_pu_bacteria 2889049205 2889049979 478
80 iso_pu_bacteria 2889276214 2889279467 478
81 iso_pu_bacteria 2904113452 2904115074 478
82 iso_pu_bacteria 2904595352 2904596796 478
83 iso_pu_bacteria 2904755435 2904756968 478
84 iso_pu_bacteria 2907202186 2907203773 478
85 iso_pu_bacteria 2919425241 2919430993 478
86 iso_pu_bacteria 2925326138 2925329969 478
87 iso_pu_bacteria 2929206907 2929210320 478
88 iso_pu_bacteria 2938649242 2938652145 478
89 iso_pu_bacteria 2939702853 2939703525 478
90 iso_pu_bacteria 2968558590 2968561481 478
91 iso_pu_bacteria 2971403814 2971409325 478
92 iso_pu_bacteria 2971410472 2971411698 478
93 iso_pu_bacteria 2971511577 2971511919 478
94 iso_pu_bacteria 2980176882 2980177059 478
95 iso_pu_bacteria 2988225383 2988226551 478
96 iso_pu_bacteria 2996632988 2996638578 478
97 iso_pu_bacteria 648028048 648169851 478
98 iso_pu_bacteria 8002317523 8002321806 478
99 iso_pu_bacteria 8054465665 8054469060 478
100 iso_pu_bacteria 8054795415 8054795972 478
101 iso_pu_bacteria 8056533031 8056539670 478
102 iso_pu_bacteria 8057473075 8057474067 478
103 iso_pu_bacteria 8057733483 8057737904 478
104 iso_pu_bacteria 8057977335 8057978699 478
105 iso_pu_bacteria 8055632911 8055635476 479
106 3300005328 Ga0070676_10003104 Ga0070676_100031042 480
107 3300005341 Ga0070691_10015292 Ga0070691_100152923 480
108 3300005347 Ga0070668_100053812 Ga0070668_1000538122 480
109 3300005440 Ga0070705_100014368 Ga0070705_1000143683 480
110 3300005441 Ga0070700_100022843 Ga0070700_1000228433 480
111 3300005444 Ga0070694_100053288 Ga0070694_1000532882 480
112 3300005459 Ga0068867_100005853 Ga0068867_1000058537 480
113 3300005467 Ga0070706_100002705 Ga0070706_1000027055 480
114 3300005468 Ga0070707_100050870 Ga0070707_1000508704 480
115 3300005468 Ga0070707_100089749 Ga0070707_1000897492 480
116 3300005471 Ga0070698_100009872 Ga0070698_1000098723 480
117 3300005535 Ga0070684_100066671 Ga0070684_1000666713 480
118 3300005536 Ga0070697_100068205 Ga0070697_1000682052 480
119 3300005536 Ga0070697_100155233 Ga0070697_1001552332 480
120 3300005545 Ga0070695_100018240 Ga0070695_1000182403 480
121 3300005549 Ga0070704_100052424 Ga0070704_1000524242 480
122 3300005615 Ga0070702_100001503 Ga0070702_1000015033 480
123 3300005617 Ga0068859_100113366 Ga0068859_1001133662 480
124 3300005719 Ga0068861_100073297 Ga0068861_1000732972 480
125 3300006358 Ga0068871_100042691 Ga0068871_1000426911 480
126 3300006847 Ga0075431_100256707 Ga0075431_1002567072 480
127 3300006931 Ga0097620_100113365 Ga0097620_1001133652 480
128 3300009093 Ga0105240_10012965 Ga0105240_100129654 480
129 3300009094 Ga0111539_10014701 Ga0111539_100147012 480
130 3300009147 Ga0114129_10031083 Ga0114129_100310831 480
131 3300013307 Ga0157372_10232037 Ga0157372_102320372 480
132 3300021384 Ga0213876_10009042 Ga0213876_100090422 480
133 3300025907 Ga0207645_10003613 Ga0207645_100036138 480
134 3300025922 Ga0207646_10167269 Ga0207646_101672692 480
135 3300025933 Ga0207706_10048105 Ga0207706_100481052 480
136 3300025938 Ga0207704_10047357 Ga0207704_100473572 480
137 3300025960 Ga0207651_10071896 Ga0207651_100718962 480
138 3300025972 Ga0207668_10129109 Ga0207668_101291092 480
139 3300026075 Ga0207708_10005377 Ga0207708_100053777 480
140 3300026089 Ga0207648_10010052 Ga0207648_100100523 480
141 3300026118 Ga0207675_100002362 Ga0207675_10000236214 480
142 3300028380 Ga0268265_10164016 Ga0268265_101640162 480
143 3300037853 Ga0436364_0375714 Ga0436364_0375714_7329_8801 480
144 3300037853 Ga0436364_1115226 Ga0436364_1115226_16678_18150 480
145 3300039437 Ga0436365_0650080 Ga0436365_0650080_101_1573 480
146 3300039437 Ga0436365_1613873 Ga0436365_1613873_4851_6323 480
147 3300049571 Ga0501034_0005360 Ga0501034_0005360_3430_4875 480
148 3300049579 Ga0501043_0036575 Ga0501043_0036575_2087_3532 480
149 3300049581 Ga0501047_0002381 Ga0501047_0002381_10563_12008 480
150 3300049823 Ga0501044_0006978 Ga0501044_0006978_9114_10559 480
151 3300050511 nmdc:mga08y16_9432_c1 nmdc:mga08y16_9432_c1_388_1842 480
152 3300050513 nmdc:mga0rr50_128878_c1 nmdc:mga0rr50_128878_c1_469_1968 480
153 iso_pu_bacteria 2512564039 2512734578 480
154 iso_pu_bacteria 2821111986 2821113540 480
155 iso_pu_bacteria 2864733723 2864734173 480
156 iso_pu_bacteria 2885526491 2885526909 480
157 iso_pu_bacteria 2889042446 2889044837 480
158 iso_pu_bacteria 2904162308 2904165434 480
159 iso_pu_bacteria 2904490793 2904491723 480
160 iso_pu_bacteria 2919160200 2919160980 480
161 iso_pu_bacteria 2931384279 2931388273 480
162 iso_pu_bacteria 2939679117 2939681358 480
163 iso_pu_bacteria 2945991243 2945993120 480
164 3300003758 Ga0055532_1000380 Ga0055532_100038012 481
165 3300005330 Ga0070690_100023617 Ga0070690_1000236172 481
166 3300005356 Ga0070674_100005808 Ga0070674_1000058083 481
167 3300005435 Ga0070714_100029532 Ga0070714_1000295322 481
168 3300005544 Ga0070686_100001788 Ga0070686_1000017886 481
169 3300005548 Ga0070665_100047163 Ga0070665_1000471633 481
170 3300005719 Ga0068861_100064006 Ga0068861_1000640062 481
171 3300005719 Ga0068861_100085143 Ga0068861_1000851432 481
172 3300005842 Ga0068858_100012813 Ga0068858_1000128133 481
173 3300006237 Ga0097621_100008459 Ga0097621_1000084594 481
174 3300006237 Ga0097621_100030653 Ga0097621_1000306532 481
175 3300006358 Ga0068871_100004321 Ga0068871_1000043213 481
176 3300006358 Ga0068871_100060755 Ga0068871_1000607552 481
177 3300007076 Ga0075435_100001687 Ga0075435_10000168710 481
178 3300009098 Ga0105245_10025695 Ga0105245_100256953 481
179 3300009098 Ga0105245_10137713 Ga0105245_101377132 481
180 3300009101 Ga0105247_10007764 Ga0105247_100077643 481
181 3300009176 Ga0105242_10014843 Ga0105242_100148433 481
182 3300009176 Ga0105242_10081934 Ga0105242_100819342 481
183 3300009177 Ga0105248_10049492 Ga0105248_100494923 481
184 3300014325 Ga0163163_10014076 Ga0163163_100140763 481
185 3300025229 Ga0209147_100029 Ga0209147_10002917 481
186 3300025923 Ga0207681_10021938 Ga0207681_100219381 481
187 3300025929 Ga0207664_10027100 Ga0207664_100271004 481
188 3300025933 Ga0207706_10047487 Ga0207706_100474872 481
189 3300025934 Ga0207686_10018019 Ga0207686_100180192 481
190 3300025937 Ga0207669_10009532 Ga0207669_100095323 481
191 3300025940 Ga0207691_10075930 Ga0207691_100759302 481
192 3300025942 Ga0207689_10117589 Ga0207689_101175892 481
193 3300025961 Ga0207712_10066026 Ga0207712_100660261 481
194 3300026023 Ga0207677_10085939 Ga0207677_100859392 481
195 3300026075 Ga0207708_10014741 Ga0207708_100147412 481
196 3300026089 Ga0207648_10064710 Ga0207648_100647102 481
197 3300026118 Ga0207675_100045811 Ga0207675_1000458112 481
198 3300026118 Ga0207675_100110235 Ga0207675_1001102352 481
199 3300026121 Ga0207683_10087623 Ga0207683_100876232 481
200 3300028379 Ga0268266_10012249 Ga0268266_100122492 481
201 3300028380 Ga0268265_10036032 Ga0268265_100360323 481
202 3300035084 Ga0373928_0000791 Ga0373928_0000791_2936_4420 481
203 3300035085 Ga0373929_0000778 Ga0373929_0000778_3711_5195 481
204 3300035088 Ga0373940_0004354 Ga0373940_0004354_1161_2630 481
205 3300035090 Ga0373949_0002047 Ga0373949_0002047_2660_4144 481
206 3300035092 Ga0373952_0014118 Ga0373952_0014118_112_1581 481
207 3300035112 Ga0373932_0005748 Ga0373932_0005748_853_2337 481
208 3300035114 Ga0373939_0000689 Ga0373939_0000689_2660_4144 481
209 3300035115 Ga0373941_0000529 Ga0373941_0000529_3688_5172 481
210 3300035121 Ga0373960_0000539 Ga0373960_0000539_1612_3096 481
211 3300035170 Ga0373943_0078800 Ga0373943_0078800_166_1623 481
212 3300035207 Ga0373942_0001399 Ga0373942_0001399_2890_4374 481
213 3300035241 Ga0373961_0004157 Ga0373961_0004157_1664_3133 481
214 3300035691 Ga0373931_0006366 Ga0373931_0006366_827_2311 481
215 3300039437 Ga0436365_1645917 Ga0436365_1645917_2198_3691 481
216 3300044656 Ga0466969_0000367 Ga0466969_0000367_20054_21499 481
217 3300044735 Ga0466968_0011615 Ga0466968_0011615_661_2106 481
218 3300045049 Ga0466959_0023666 Ga0466959_0023666_1666_3111 481
219 3300048907 Ga0496104_0017896 Ga0496104_0017896_3125_4597 481
220 3300048908 Ga0496105_0103699 Ga0496105_0103699_579_2060 481
221 3300048911 Ga0496108_0007619 Ga0496108_0007619_3071_4525 481
222 3300048912 Ga0496109_0036788 Ga0496109_0036788_518_1972 481
223 3300048915 Ga0496112_0070288 Ga0496112_0070288_1318_2772 481
224 3300048917 Ga0496114_0000913 Ga0496114_0000913_15541_17013 481
225 3300048918 Ga0496115_0074701 Ga0496115_0074701_389_1861 481
226 3300050513 nmdc:mga0rr50_558_c1 nmdc:mga0rr50_558_c1_15318_16787 481
227 iso_pu_bacteria 2593339198 2595316697 481
228 iso_pu_bacteria 2671180694 2673817499 481
229 iso_pu_bacteria 2864997549 2864997641 481
230 iso_pu_bacteria 2889295896 2889296454 481
231 iso_pu_bacteria 2980125574 2980128223 481
232 iso_pu_bacteria 2980182181 2980184635 481
233 iso_pu_bacteria 2981284811 2981284919 481
234 iso_pu_bacteria 2981289755 2981289863 481
235 iso_pu_bacteria 2981980479 2981981499 481
236 iso_pu_bacteria 2981985349 2981986395 481
237 iso_pu_bacteria 2984527788 2984529017 481
238 iso_pu_bacteria 2984532647 2984535119 481
239 3300003578 Ga0006562J51391_1005833 Ga0006562J51391_10058333 482
240 3300003761 Ga0055535_1002959 Ga0055535_10029592 482
241 3300003841 Ga0055541_1001772 Ga0055541_10017723 482
242 3300005719 Ga0068861_100089635 Ga0068861_1000896352 482
243 3300009036 Ga0105244_10004292 Ga0105244_100042924 482
244 3300011119 Ga0105246_10014382 Ga0105246_100143823 482
245 3300025224 Ga0209784_100037 Ga0209784_100037188 482
246 3300025225 Ga0209566_100076 Ga0209566_100076103 482
247 3300025225 Ga0209566_100118 Ga0209566_10011890 482
248 3300025225 Ga0209566_100693 Ga0209566_1006932 482
249 3300025233 Ga0209437_100832 Ga0209437_1008327 482
250 3300025242 Ga0209258_100613 Ga0209258_10061330 482
251 3300025291 Ga0209675_1003801 Ga0209675_10038017 482
252 3300025294 Ga0209025_1006012 Ga0209025_10060124 482
253 3300025294 Ga0209025_1007806 Ga0209025_10078062 482
254 3300041404 Ga0439436_0003318 Ga0439436_0003318_2745_4193 482
255 3300042007 Ga0439449_0000070 Ga0439449_0000070_29157_30605 482
256 3300042015 Ga0439462_0000390 Ga0439462_0000390_4717_6165 482
257 3300048919 Ga0496116_0000796 Ga0496116_0000796_18647_20101 482
258 3300048919 Ga0496116_0007999 Ga0496116_0007999_7257_8705 482
259 3300048919 Ga0496116_0030646 Ga0496116_0030646_71_1519 482
260 3300048919 Ga0496116_0043937 Ga0496116_0043937_961_2409 482
261 3300048919 Ga0496116_0104758 Ga0496116_0104758_19_1467 482
262 3300048920 Ga0496117_0033126 Ga0496117_0033126_1542_2990 482
263 3300048920 Ga0496117_0089976 Ga0496117_0089976_154_1608 482
264 3300048921 Ga0496118_0007193 Ga0496118_0007193_182_1630 482
265 3300048922 Ga0496119_0000072 Ga0496119_0000072_47851_49302 482
266 3300048923 Ga0496120_0000094 Ga0496120_0000094_32836_34287 482
267 3300048923 Ga0496120_0087728 Ga0496120_0087728_55_1503 482
268 3300048925 Ga0496122_0000429 Ga0496122_0000429_59188_60729 482
269 3300048925 Ga0496122_0038856 Ga0496122_0038856_749_2200 482
270 3300048926 Ga0496123_0021711 Ga0496123_0021711_475_1926 482
271 3300048927 Ga0496124_0000340 Ga0496124_0000340_11260_12711 482
272 3300048927 Ga0496124_0122033 Ga0496124_0122033_80_1534 482
273 3300048928 Ga0496125_0000339 Ga0496125_0000339_71665_73113 482
274 3300048928 Ga0496125_0018312 Ga0496125_0018312_1976_3430 482
275 3300048929 Ga0496126_0008307 Ga0496126_0008307_6421_7872 482
276 3300048929 Ga0496126_0009838 Ga0496126_0009838_3338_4789 482
277 3300048929 Ga0496126_0010866 Ga0496126_0010866_4100_5548 482
278 iso_pu_bacteria 2946053406 2946055874 482

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03129

HGTP_anticodon

Anticodon binding domain

324

420

0.96

PF09180

ProRS-C_1

Prolyl-tRNA synthetase, C-terminal

446

513

0.93

PF00587

tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

128

308

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1h4q-assembly1.cif.gz_A prolyl-trna synthetase from thermus thermophilus complexed with trnapro(cgg), atp and prolinol 0.9633 9 482
1hc7-assembly2.cif.gz_D prolyl-trna synthetase from thermus thermophilus 0.9627 9 482
1h4q-assembly1.cif.gz_A prolyl-trna synthetase from thermus thermophilus complexed with trnapro(cgg), atp and prolinol 0.9613 9 482
7ot1-assembly1.cif.gz_A human prolyl-trna synthetase in complex with l-proline and compound 3c 0.961 12 482
1hc7-assembly2.cif.gz_D prolyl-trna synthetase from thermus thermophilus 0.9607 9 482
ID Description Score Start End Superfamily
af_Q0D8E4_1_175_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9917 112 286 3.30.930.10
af_Q0D8E4_1_175_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9861 112 286 3.30.930.10
af_Q58635_274_391_3.40.50.800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9799 287 403 3.40.50.800
af_Q2QS11_308_428_3.40.50.800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9796 287 403 3.40.50.800
1nj6A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9793 287 390 3.40.50.800
ID Description Score Start End GO Terms
AF-A0A3B0P1S0-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) 0.993 182 261 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A2V7V8F3-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) 0.986 145 302 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-X0UJB1-F1-model_v4 proline--tRNA ligase (EC 6.1.1.15) 0.9842 171 448 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A3N5R4Q1-F1-model_v4 proline--tRNA ligase (EC 6.1.1.15) 0.9819 228 482 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A7N0UPV5-F1-model_v4 Aminoacyl-transfer RNA synthetases class-II family profile domain-containing protein 0.9811 113 393 GO:0004827
GO:0005524
GO:0005739
GO:0006433
GO:0009570
GO:0017101

Feature Viewer

pLDDT pTM Quality
91.97 0.91 High
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Predicted Structure (AlphaFold2)

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