F381317

General Info

Members Datasets Scaffolds Average Seq Length
276 198 552 513

Family's Representative Sequence

Representative Sequence 3300046462|Ga0495651_0058523|Ga0495651_0058523_820_2535
Length 571
Sequence MSKRFLLNLELICHKMPELFRFRAAARKLLWSCKKAITHLPPLSDRPGKFLEGQCLMAEMMSKTVTGPVIRLHPADNVVIARIDVAIGTPVPAEDFVCRSQVAAGYKIAATHIKKGEPVRKYDVVIGFAATDIAPGTLVHSHNVEFREFDRDYAFGADYRPVEMVPEAGRATFQGIVRDNGEVATRNYIGVLSTVNCSATVAHKIAAWFTPERLADYPNVDGVVAFTHSIGCGMEMSGEPMALLRRTMAGYARHPNLAAALIVGLGCERNQLAGLMDQEGLKADARLHTFIMQESGGTRQTIEAGIAAVRALLPDANRVKRSTVPASHLKIGLQCGGSDGFSSITANPSLGAAMDLLVRHGGTAILSETPEIYGVEHTLTRRAVSREVGEKLVERIRWWKDEYSVGRDVQINGQVSPGNQVGGLANIFEKSIGSAMKGGTGPLMDVYRYAEIVKQTGLVFMDTPGFDPVSATGQIAGGANLIAFTTGRGSMFGAKPVPSLKLATNTPMYMRLTEDMDLNCGGILDGTASIQSTGQKIFDAILAAASGERTKSEMLGLGDHEFVPWQIGIMS

Samples

Sample ID Description Type Environment
1 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
2 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
33 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
34 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
65 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
66 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
67 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
68 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
72 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
73 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
76 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
77 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
78 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
79 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
80 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
92 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
93 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
94 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
95 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
99 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
100 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
101 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
105 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
106 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
107 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
108 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
109 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
110 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
111 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
112 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
113 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
114 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
119 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
120 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
125 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
126 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
127 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
128 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
129 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
130 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
133 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
134 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
135 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
140 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
145 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
146 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
150 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
151 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
152 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
153 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
154 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
155 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
162 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
163 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
166 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
167 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
176 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
177 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
178 2643221569 Achromobacter sp. Root565 Isolate Unclassified
179 2643221594 Achromobacter sp. Root170 Isolate Unclassified
180 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
181 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
182 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
183 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
184 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
185 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
186 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
187 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
188 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
189 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
190 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
191 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
192 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
193 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
194 2858950400 Achromobacter sp. K91 Isolate Unclassified
195 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
196 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
197 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
198 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.67
Metatranscriptomes 0.36
Isolates 7.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.62
Nodule 2.54
Rhizoplane 2.9
Rhizosphere 79.71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495651_0058523 3300046462 Bacteria 2957
2 Ga0006778J45830_1031455 3300003162 Bacteria 1735
3 rootH2_10007501 3300003320 Bacteria 14396
4 rootH1_10115458 3300003323 Bacteria 2887
5 Ga0070676_10077848 3300005328 Bacteria 2005
6 Ga0070683_100021996 3300005329 Bacteria 5693
7 Ga0070670_100030821 3300005331 Bacteria 4618
8 Ga0070670_100083289 3300005331 Bacteria 2748
9 Ga0068869_100008224 3300005334 Bacteria 6714
10 Ga0070661_100059458 3300005344 Bacteria 2802
11 Ga0070675_100043776 3300005354 Bacteria 3660
12 Ga0070675_100052287 3300005354 Bacteria 3358
13 Ga0070671_100060671 3300005355 Bacteria 3149
14 Ga0070671_100088101 3300005355 Bacteria 2597
15 Ga0070673_100022553 3300005364 Bacteria 4585
16 Ga0070678_100039369 3300005456 Bacteria 3334
17 Ga0070681_10045087 3300005458 Bacteria 4413
18 Ga0068867_100065252 3300005459 Bacteria 2709
19 Ga0068853_100058694 3300005539 Bacteria 3322
20 Ga0070672_100086278 3300005543 Bacteria 2524
21 Ga0070672_100127773 3300005543 Bacteria 2087
22 Ga0070704_100127542 3300005549 Bacteria 1966
23 Ga0070664_100119665 3300005564 Bacteria 2304
24 Ga0068857_100007845 3300005577 Bacteria 9206
25 Ga0068852_100182116 3300005616 Bacteria 1976
26 Ga0068859_100012871 3300005617 Bacteria 8404
27 Ga0068864_100047698 3300005618 Bacteria 3680
28 Ga0068864_100115550 3300005618 Bacteria 2394
29 Ga0068862_100007224 3300005844 Bacteria 9222
30 Ga0081455_10042360 3300005937 Bacteria 3995
31 Ga0075365_10077835 3300006038 Bacteria 2241
32 Ga0075366_10050738 3300006195 Bacteria 2464
33 Ga0097621_100036221 3300006237 Bacteria 3947
34 Ga0097621_100096129 3300006237 Bacteria 2486
35 Ga0068871_100083898 3300006358 Bacteria 2643
36 Ga0075431_100025740 3300006847 Bacteria 6030
37 Ga0097620_100012871 3300006931 Bacteria 8404
38 Ga0079104_1000208 3300006946 Bacteria 82037
39 Ga0105251_10022507 3300009011 Bacteria 3271
40 Ga0105244_10027484 3300009036 Bacteria 3064
41 Ga0111539_10017884 3300009094 Bacteria 8779
42 Ga0105248_10026530 3300009177 Bacteria 6445
43 Ga0105248_10106028 3300009177 Bacteria 3169
44 Ga0105248_10211163 3300009177 Bacteria 2187
45 Ga0157369_10100194 3300013105 Bacteria 3088
46 Ga0157374_10054111 3300013296 Bacteria 3743
47 Ga0157378_10078108 3300013297 Bacteria 2985
48 Ga0163162_10009420 3300013306 Bacteria 9499
49 Ga0163162_10121359 3300013306 Bacteria 2718
50 Ga0157375_10008262 3300013308 Bacteria 9113
51 Ga0157375_10102844 3300013308 Bacteria 2942
52 Ga0163163_10044362 3300014325 Bacteria 4362
53 Ga0209676_1009425 3300025292 Bacteria 4212
54 Ga0209050_1006880 3300025298 Bacteria 6596
55 Ga0207682_10008511 3300025893 Bacteria 4054
56 Ga0207688_10010174 3300025901 Bacteria 5118
57 Ga0207680_10013289 3300025903 Bacteria 4225
58 Ga0207680_10020229 3300025903 Bacteria 3577
59 Ga0207645_10020929 3300025907 Bacteria 4273
60 Ga0207645_10100270 3300025907 Bacteria 1868
61 Ga0207643_10005098 3300025908 Bacteria 7029
62 Ga0207646_10020570 3300025922 Bacteria 6114
63 Ga0207650_10026576 3300025925 Bacteria 4130
64 Ga0207644_10058689 3300025931 Bacteria 2782
65 Ga0207706_10019528 3300025933 Bacteria 6096
66 Ga0207689_10004249 3300025942 Bacteria 13025
67 Ga0207651_10011081 3300025960 Bacteria 5029
68 Ga0207668_10018954 3300025972 Bacteria 4339
69 Ga0207703_10129375 3300026035 Bacteria 2178
70 Ga0207639_10042369 3300026041 Bacteria 3411
71 Ga0207641_10061367 3300026088 Bacteria 3206
72 Ga0207648_10033161 3300026089 Bacteria 4555
73 Ga0207648_10087350 3300026089 Bacteria 2721
74 Ga0207674_10016320 3300026116 Bacteria 8134
75 Ga0207683_10001400 3300026121 Bacteria 21775
76 Ga0268265_10016549 3300028380 Bacteria 5069
77 Ga0265318_10003040 3300028577 Bacteria 8635
78 Ga0307511_10000961 3300030521 Bacteria 30536
79 Ga0265328_10003044 3300031239 Bacteria 7483
80 Ga0265329_10021898 3300031242 Bacteria 2142
81 Ga0265331_10027108 3300031250 Bacteria 2875
82 Ga0265327_10055343 3300031251 Bacteria 2050
83 Ga0307408_100005989 3300031548 Bacteria 8093
84 Ga0316575_10004702 3300031665 Bacteria 4813
85 Ga0316576_10022320 3300031727 Bacteria 4394
86 Ga0316576_10037376 3300031727 Bacteria 3475
87 Ga0307406_10000286 3300031901 Bacteria 29626
88 Ga0307416_100233624 3300032002 Bacteria 1775
89 Ga0316583_10009145 3300032133 Bacteria 3574
90 Ga0307507_10055993 3300033179 Bacteria 3732
91 Ga0316574_0009506 3300035398 Bacteria 5448
92 Ga0373933_0095451 3300035724 Bacteria 1840
93 Ga0316582_0095760 3300036647 Bacteria 1960
94 Ga0316584_0062972 3300036712 Bacteria 2777
95 Ga0395900_0007738 3300037418 Bacteria 11084
96 Ga0395900_0184593 3300037418 Bacteria 2117
97 Ga0395898_0232524 3300037466 Bacteria 1758
98 Ga0395905_0003757 3300037471 Bacteria 16082
99 Ga0395905_0007005 3300037471 Bacteria 11269
100 Ga0395905_0031509 3300037471 Bacteria 4992
101 Ga0400483_131563 3300039062 Bacteria 4756
102 Ga0400483_239170 3300039062 Bacteria 6328
103 Ga0400483_291584 3300039062 Bacteria 27744
104 Ga0451577_0035598 3300042876 Bacteria 4484
105 Ga0451577_0161613 3300042876 Bacteria 2017
106 Ga0453683_0002111 3300044673 Bacteria 15856
107 Ga0453684_0003886 3300044712 Bacteria 32866
108 Ga0453684_0054842 3300044712 Bacteria 5187
109 Ga0466960_0049656 3300044901 Bacteria 2020
110 Ga0451576_0002032 3300045051 Bacteria 31949
111 Ga0451576_0009349 3300045051 Bacteria 11371
112 Ga0451576_0230106 3300045051 Bacteria 1936
113 Ga0451576_0326420 3300045051 Bacteria 1606
114 Ga0495592_0009247 3300046454 Bacteria 7413
115 Ga0495590_0004494 3300046457 Bacteria 5626
116 Ga0495591_003140 3300046458 Bacteria 8725
117 Ga0495629_0000066 3300046459 Bacteria 93655
118 Ga0495629_0012899 3300046459 Bacteria 6045
119 Ga0495629_0064162 3300046459 Bacteria 2564
120 Ga0495638_0002276 3300046460 Bacteria 15872
121 Ga0495638_0002565 3300046460 Bacteria 14715
122 Ga0495641_0006513 3300046461 Bacteria 7549
123 Ga0495651_0019881 3300046462 Bacteria 5207
124 Ga0495653_0000405 3300046463 Bacteria 34579
125 Ga0495650_0008663 3300046471 Bacteria 5893
126 Ga0495580_0000225 3300046472 Bacteria 43951
127 Ga0495580_0004192 3300046472 Bacteria 12128
128 Ga0495580_0007642 3300046472 Bacteria 8671
129 Ga0495580_0011513 3300046472 Bacteria 6843
130 Ga0495580_0046056 3300046472 Bacteria 3096
131 Ga0495582_0000329 3300046473 Bacteria 26019
132 Ga0495582_0001406 3300046473 Bacteria 13569
133 Ga0495605_0000567 3300046474 Bacteria 30104
134 Ga0495662_0027458 3300046476 Bacteria 2749
135 Ga0495662_0069064 3300046476 Bacteria 1711
136 Ga0495664_0000750 3300046477 Bacteria 16593
137 Ga0495585_0051879 3300046492 Bacteria 2271
138 Ga0495594_0063726 3300046499 Bacteria 2042
139 Ga0495596_0000138 3300046500 Bacteria 50218
140 Ga0495583_0002924 3300046506 Bacteria 13771
141 Ga0495583_0006374 3300046506 Bacteria 7733
142 Ga0495606_0040760 3300046507 Bacteria 3119
143 Ga0495608_0007349 3300046511 Bacteria 7788
144 Ga0495616_0000184 3300046513 Bacteria 52694
145 Ga0495618_0011645 3300046514 Bacteria 5336
146 Ga0495618_0076326 3300046514 Bacteria 2135
147 Ga0495628_0003016 3300046516 Bacteria 15097
148 Ga0495628_0057882 3300046516 Bacteria 3048
149 Ga0495630_0001868 3300046517 Bacteria 14692
150 Ga0495630_0005551 3300046517 Bacteria 8899
151 Ga0495637_0022879 3300046520 Bacteria 2845
152 Ga0495643_0000630 3300046522 Bacteria 41718
153 Ga0495648_0000415 3300046524 Bacteria 47041
154 Ga0495648_0014578 3300046524 Bacteria 5745
155 Ga0495666_0000159 3300046526 Bacteria 28594
156 Ga0495666_0000322 3300046526 Bacteria 20886
157 Ga0495666_0000326 3300046526 Bacteria 20824
158 Ga0495666_0001979 3300046526 Bacteria 10113
159 Ga0495640_0004827 3300046533 Bacteria 10735
160 Ga0495640_0047262 3300046533 Bacteria 2979
161 Ga0495586_0000478 3300046535 Bacteria 23929
162 Ga0495587_0001090 3300046536 Bacteria 17842
163 Ga0495587_0005809 3300046536 Bacteria 8035
164 Ga0495609_0001212 3300046538 Bacteria 17772
165 Ga0495667_0056091 3300046559 Bacteria 2591
166 Ga0495634_0002594 3300046642 Bacteria 14877
167 Ga0495634_0004232 3300046642 Bacteria 11327
168 Ga0495635_0004924 3300046663 Bacteria 9294
169 Ga0495635_0026886 3300046663 Bacteria 4001
170 Ga0495661_0000796 3300046665 Bacteria 29880
171 Ga0495661_0001199 3300046665 Bacteria 22488
172 Ga0495657_0050182 3300046675 Bacteria 2806
173 Ga0495599_0006665 3300046678 Bacteria 6972
174 Ga0495623_0005403 3300046679 Bacteria 8360
175 Ga0495623_0046556 3300046679 Bacteria 2752
176 Ga0495623_0057457 3300046679 Bacteria 2447
177 Ga0495646_0001515 3300046680 Bacteria 13843
178 Ga0495646_0006771 3300046680 Bacteria 7271
179 Ga0495658_0069600 3300046683 Bacteria 2040
180 Ga0495669_0000018 3300046684 Bacteria 127866
181 Ga0495613_0001390 3300046689 Bacteria 18409
182 Ga0495613_0002980 3300046689 Bacteria 12682
183 Ga0495624_0000750 3300046690 Bacteria 25541
184 Ga0495624_0008926 3300046690 Bacteria 6968
185 Ga0495671_0003747 3300046692 Bacteria 9241
186 Ga0495589_0001187 3300046794 Bacteria 15524
187 Ga0495589_0003698 3300046794 Bacteria 8256
188 Ga0495600_0027842 3300046809 Bacteria 3654
189 Ga0495581_0000988 3300047315 Bacteria 15295
190 Ga0495604_0002843 3300047317 Bacteria 13895
191 Ga0495604_0013531 3300047317 Bacteria 6504
192 Ga0495604_0018504 3300047317 Bacteria 5579
193 Ga0495604_0022810 3300047317 Bacteria 4996
194 Ga0495674_0010466 3300047319 Bacteria 8781
195 Ga0495674_0012921 3300047319 Bacteria 7862
196 Ga0495674_0023884 3300047319 Bacteria 5627
197 Ga0495672_0003239 3300047320 Bacteria 14131
198 Ga0495672_0041303 3300047320 Bacteria 2790
199 Ga0495676_0000067 3300047321 Bacteria 80084
200 Ga0495676_0003223 3300047321 Bacteria 14743
201 Ga0495680_0004083 3300047322 Bacteria 14058
202 Ga0495680_0030628 3300047322 Bacteria 4391
203 Ga0495683_0000650 3300047323 Bacteria 25785
204 Ga0495675_0002285 3300047444 Bacteria 11449
205 Ga0495675_0006877 3300047444 Bacteria 6983
206 Ga0495677_0026260 3300047445 Bacteria 2112
207 Ga0495679_000204 3300047446 Bacteria 51791
208 Ga0495679_000508 3300047446 Bacteria 27671
209 Ga0495673_0002948 3300047469 Bacteria 11477
210 Ga0495673_0040838 3300047469 Bacteria 2092
211 Ga0495684_0022632 3300047471 Bacteria 4833
212 Ga0495686_0007688 3300047472 Bacteria 8049
213 Ga0495686_0079012 3300047472 Bacteria 2012
214 Ga0495593_0001671 3300047673 Bacteria 13135
215 Ga0495593_0002005 3300047673 Bacteria 12143
216 Ga0495593_0009841 3300047673 Bacteria 5547
217 Ga0495602_0025384 3300048088 Bacteria 5736
218 Ga0495602_0029124 3300048088 Bacteria 5270
219 Ga0495602_0031217 3300048088 Bacteria 5040
220 Ga0495602_0067871 3300048088 Bacteria 3065
221 Ga0495614_0003628 3300048089 Bacteria 6920
222 Ga0495626_0008247 3300048091 Bacteria 5731
223 Ga0496100_0027373 3300048903 Bacteria 3506
224 Ga0496101_0062274 3300048904 Bacteria 2712
225 Ga0496103_0012462 3300048906 Bacteria 5043
226 Ga0496106_0000014 3300048909 Bacteria 194239
227 Ga0496107_0071975 3300048910 Bacteria 2513
228 Ga0496108_0122959 3300048911 Bacteria 2227
229 Ga0496117_0000855 3300048920 Bacteria 47094
230 Ga0496117_0065318 3300048920 Bacteria 2475
231 Ga0496118_0017496 3300048921 Bacteria 6520
232 Ga0496118_0030818 3300048921 Bacteria 4464
233 Ga0496121_0017815 3300048924 Bacteria 7214
234 Ga0496121_0025899 3300048924 Bacteria 5548
235 Ga0496121_0030910 3300048924 Bacteria 4908
236 Ga0496121_0090401 3300048924 Bacteria 2393
237 Ga0496124_0043970 3300048927 Bacteria 3836
238 Ga0496124_0070307 3300048927 Bacteria 2904
239 Ga0496125_0052411 3300048928 Bacteria 3355
240 Ga0496125_0069029 3300048928 Bacteria 2776
241 Ga0496126_0000050 3300048929 Bacteria 316466
242 Ga0496126_0107629 3300048929 Bacteria 2431
243 Ga0495678_009214 3300049459 Bacteria 4909
244 Ga0495682_0011347 3300049460 Bacteria 3430
245 Ga0501031_0080390 3300049568 Bacteria 2125
246 Ga0501263_001718 3300049760 Bacteria 2122
247 nmdc:mga0k408_69190_c1 3300050493 Bacteria 2060
248 nmdc:mga07m45_4605_c1 3300050496 Bacteria 6759
249 nmdc:mga0qj67_19865_c2 3300050509 Bacteria 3697
250 nmdc:mga06r32_19147_c1 3300050510 Bacteria 6281
251 Ga0500568_0014185 3300053139 Bacteria 3607
252 Ga0500616_0018838 3300053153 Bacteria 3899
253 Ga0500634_0036134 3300053161 Bacteria 2690
254 Ga0500636_0001432 3300053177 Bacteria 12994
255 2599903215 2599185292 Bacteria 6290804
256 2643862293 2643221569 Bacteria 6064337
257 2643980681 2643221594 Bacteria 5811388
258 2808973565 2808606384 Bacteria 8474373
259 2809008414 2808606390 Bacteria 8476311
260 2809015248 2808606391 Bacteria 8308166
261 2809032002 2808606395 Bacteria 6020352
262 2821126673 2821123053 Bacteria 7836056
263 2834643044 2834641062 Bacteria 5559922
264 2838740280 2838736955 Bacteria 5760694
265 2841843595 2841840854 Bacteria 5761912
266 2842143315 2842140634 Bacteria 5759631
267 2842325719 2842324504 Bacteria 9364110
268 2842349998 2842348783 Bacteria 9002918
269 2842454808 2842454564 Bacteria 8730687
270 2857536765 2857531043 Bacteria 6754041
271 2857540689 2857537821 Bacteria 5248181
272 2858955753 2858950400 Bacteria 6783797
273 2929203526 2929199973 Bacteria 7260745
274 642425797 641736151 Bacteria 7477263
275 8003403083 8003400568 Bacteria 5535898
276 8055910370 8055909800 Bacteria 7278581
277 Ga0495651_0058523
278 Ga0006778J45830_1031455
279 rootH2_10007501
280 rootH1_10115458
281 Ga0070676_10077848
282 Ga0070683_100021996
283 Ga0070670_100030821
284 Ga0070670_100083289
285 Ga0068869_100008224
286 Ga0070661_100059458
287 Ga0070675_100043776
288 Ga0070675_100052287
289 Ga0070671_100060671
290 Ga0070671_100088101
291 Ga0070673_100022553
292 Ga0070678_100039369
293 Ga0070681_10045087
294 Ga0068867_100065252
295 Ga0068853_100058694
296 Ga0070672_100086278
297 Ga0070672_100127773
298 Ga0070704_100127542
299 Ga0070664_100119665
300 Ga0068857_100007845
301 Ga0068852_100182116
302 Ga0068859_100012871
303 Ga0068864_100047698
304 Ga0068864_100115550
305 Ga0068862_100007224
306 Ga0081455_10042360
307 Ga0075365_10077835
308 Ga0075366_10050738
309 Ga0097621_100036221
310 Ga0097621_100096129
311 Ga0068871_100083898
312 Ga0075431_100025740
313 Ga0097620_100012871
314 Ga0079104_1000208
315 Ga0105251_10022507
316 Ga0105244_10027484
317 Ga0111539_10017884
318 Ga0105248_10026530
319 Ga0105248_10106028
320 Ga0105248_10211163
321 Ga0157369_10100194
322 Ga0157374_10054111
323 Ga0157378_10078108
324 Ga0163162_10009420
325 Ga0163162_10121359
326 Ga0157375_10008262
327 Ga0157375_10102844
328 Ga0163163_10044362
329 Ga0209676_1009425
330 Ga0209050_1006880
331 Ga0207682_10008511
332 Ga0207688_10010174
333 Ga0207680_10013289
334 Ga0207680_10020229
335 Ga0207645_10020929
336 Ga0207645_10100270
337 Ga0207643_10005098
338 Ga0207646_10020570
339 Ga0207650_10026576
340 Ga0207644_10058689
341 Ga0207706_10019528
342 Ga0207689_10004249
343 Ga0207651_10011081
344 Ga0207668_10018954
345 Ga0207703_10129375
346 Ga0207639_10042369
347 Ga0207641_10061367
348 Ga0207648_10033161
349 Ga0207648_10087350
350 Ga0207674_10016320
351 Ga0207683_10001400
352 Ga0268265_10016549
353 Ga0265318_10003040
354 Ga0307511_10000961
355 Ga0265328_10003044
356 Ga0265329_10021898
357 Ga0265331_10027108
358 Ga0265327_10055343
359 Ga0307408_100005989
360 Ga0316575_10004702
361 Ga0316576_10022320
362 Ga0316576_10037376
363 Ga0307406_10000286
364 Ga0307416_100233624
365 Ga0316583_10009145
366 Ga0307507_10055993
367 Ga0316574_0009506
368 Ga0373933_0095451
369 Ga0316582_0095760
370 Ga0316584_0062972
371 Ga0395900_0007738
372 Ga0395900_0184593
373 Ga0395898_0232524
374 Ga0395905_0003757
375 Ga0395905_0007005
376 Ga0395905_0031509
377 Ga0400483_131563
378 Ga0400483_239170
379 Ga0400483_291584
380 Ga0451577_0035598
381 Ga0451577_0161613
382 Ga0453683_0002111
383 Ga0453684_0003886
384 Ga0453684_0054842
385 Ga0466960_0049656
386 Ga0451576_0002032
387 Ga0451576_0009349
388 Ga0451576_0230106
389 Ga0451576_0326420
390 Ga0495592_0009247
391 Ga0495590_0004494
392 Ga0495591_003140
393 Ga0495629_0000066
394 Ga0495629_0012899
395 Ga0495629_0064162
396 Ga0495638_0002276
397 Ga0495638_0002565
398 Ga0495641_0006513
399 Ga0495651_0019881
400 Ga0495653_0000405
401 Ga0495650_0008663
402 Ga0495580_0000225
403 Ga0495580_0004192
404 Ga0495580_0007642
405 Ga0495580_0011513
406 Ga0495580_0046056
407 Ga0495582_0000329
408 Ga0495582_0001406
409 Ga0495605_0000567
410 Ga0495662_0027458
411 Ga0495662_0069064
412 Ga0495664_0000750
413 Ga0495585_0051879
414 Ga0495594_0063726
415 Ga0495596_0000138
416 Ga0495583_0002924
417 Ga0495583_0006374
418 Ga0495606_0040760
419 Ga0495608_0007349
420 Ga0495616_0000184
421 Ga0495618_0011645
422 Ga0495618_0076326
423 Ga0495628_0003016
424 Ga0495628_0057882
425 Ga0495630_0001868
426 Ga0495630_0005551
427 Ga0495637_0022879
428 Ga0495643_0000630
429 Ga0495648_0000415
430 Ga0495648_0014578
431 Ga0495666_0000159
432 Ga0495666_0000322
433 Ga0495666_0000326
434 Ga0495666_0001979
435 Ga0495640_0004827
436 Ga0495640_0047262
437 Ga0495586_0000478
438 Ga0495587_0001090
439 Ga0495587_0005809
440 Ga0495609_0001212
441 Ga0495667_0056091
442 Ga0495634_0002594
443 Ga0495634_0004232
444 Ga0495635_0004924
445 Ga0495635_0026886
446 Ga0495661_0000796
447 Ga0495661_0001199
448 Ga0495657_0050182
449 Ga0495599_0006665
450 Ga0495623_0005403
451 Ga0495623_0046556
452 Ga0495623_0057457
453 Ga0495646_0001515
454 Ga0495646_0006771
455 Ga0495658_0069600
456 Ga0495669_0000018
457 Ga0495613_0001390
458 Ga0495613_0002980
459 Ga0495624_0000750
460 Ga0495624_0008926
461 Ga0495671_0003747
462 Ga0495589_0001187
463 Ga0495589_0003698
464 Ga0495600_0027842
465 Ga0495581_0000988
466 Ga0495604_0002843
467 Ga0495604_0013531
468 Ga0495604_0018504
469 Ga0495604_0022810
470 Ga0495674_0010466
471 Ga0495674_0012921
472 Ga0495674_0023884
473 Ga0495672_0003239
474 Ga0495672_0041303
475 Ga0495676_0000067
476 Ga0495676_0003223
477 Ga0495680_0004083
478 Ga0495680_0030628
479 Ga0495683_0000650
480 Ga0495675_0002285
481 Ga0495675_0006877
482 Ga0495677_0026260
483 Ga0495679_000204
484 Ga0495679_000508
485 Ga0495673_0002948
486 Ga0495673_0040838
487 Ga0495684_0022632
488 Ga0495686_0007688
489 Ga0495686_0079012
490 Ga0495593_0001671
491 Ga0495593_0002005
492 Ga0495593_0009841
493 Ga0495602_0025384
494 Ga0495602_0029124
495 Ga0495602_0031217
496 Ga0495602_0067871
497 Ga0495614_0003628
498 Ga0495626_0008247
499 Ga0496100_0027373
500 Ga0496101_0062274
501 Ga0496103_0012462
502 Ga0496106_0000014
503 Ga0496107_0071975
504 Ga0496108_0122959
505 Ga0496117_0000855
506 Ga0496117_0065318
507 Ga0496118_0017496
508 Ga0496118_0030818
509 Ga0496121_0017815
510 Ga0496121_0025899
511 Ga0496121_0030910
512 Ga0496121_0090401
513 Ga0496124_0043970
514 Ga0496124_0070307
515 Ga0496125_0052411
516 Ga0496125_0069029
517 Ga0496126_0000050
518 Ga0496126_0107629
519 Ga0495678_009214
520 Ga0495682_0011347
521 Ga0501031_0080390
522 Ga0501263_001718
523 nmdc:mga0k408_69190_c1
524 nmdc:mga07m45_4605_c1
525 nmdc:mga0qj67_19865_c2
526 nmdc:mga06r32_19147_c1
527 Ga0500568_0014185
528 Ga0500616_0018838
529 Ga0500634_0036134
530 Ga0500636_0001432
531 2599903215
532 2643862293
533 2643980681
534 2808973565
535 2809008414
536 2809015248
537 2809032002
538 2821126673
539 2834643044
540 2838740280
541 2841843595
542 2842143315
543 2842325719
544 2842349998
545 2842454808
546 2857536765
547 2857540689
548 2858955753
549 2929203526
550 642425797
551 8003403083
552 8055910370

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04295

GD_AH_second

D-galactarate dehydratase/Altronate hydrolase, second domain

175

317

0.98

PF08666

SAF

SAF domain

76

145

0.97

PF20629

GD_AH_C

D-galactarate/Altronate dehydratase, C-terminal

326

570

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3k3s-assembly3.cif.gz_C crystal structure of altronate hydrolase (fragment 1-84) from shigella flexneri. 0.9484 7 86
6u7l-assembly2.cif.gz_D 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. 0.9113 5 509
6u7l-assembly2.cif.gz_D 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. 0.9093 5 509
6u7l-assembly2.cif.gz_C 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. 0.9039 5 509
6u7l-assembly1.cif.gz_B 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. 0.9037 8 509
ID Description Score Start End Superfamily
3k3sD01 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4; 0.9283 8 86 2.30.130.110
af_P39829_14_92_2.30.130.110 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4; 0.8916 8 84 2.30.130.110
3k3sD01 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4; 0.8748 8 86 2.30.130.110
af_P39829_14_92_2.30.130.110 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4; 0.8604 8 84 2.30.130.110
4kt7B00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.6718 124 230 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A4S1GT81-F1-model_v4 Altronate dehydratase 0.9925 284 477 GO:0019698
AF-A0A4S0JK72-F1-model_v4 Altronate dehydratase 0.9923 360 467 GO:0019698
AF-A0A377LIN9-F1-model_v4 deleted 0.9881 366 494
AF-A0A436L3M1-F1-model_v4 deleted 0.9866 307 444
AF-A0A7Y2PJS3-F1-model_v4 Altronate dehydratase 0.9861 309 490 GO:0019698

Map