F380889

General Info

Members Datasets Scaffolds Average Seq Length
276 159 276 193

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100000331|Ga0070690_10000033126
Length 200
Sequence MAVDIAEIKRLRELTGVGMTDAKKALDDAAGDFDKALAEMRKKGMTKAEKRGEREARAGVIGSYLHDNRIGVLVEVNCETDFVARNEIFTNLVKDLTMQIAASAPQYVSADDIPEADQEAAKAEFTEKAKAEGKPENIVGQIVEGMLKKHFAERCLMDQPFIKNPDQTVGTYIKEHIAKLGENIVVRRFSRMALGEVAEY

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
42 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
59 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013874 Rhizosphere microbial communities from switchgrass harvested rhizosphere in Austin, TX, USA - RS_213 Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
110 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
111 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
112 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
113 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
121 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
122 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
123 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
124 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
125 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
126 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
136 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
137 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
138 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
142 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
145 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
148 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
149 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
150 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
151 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
152 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
153 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
154 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
155 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
156 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
157 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
158 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
159 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.19
Nodule 0
Rhizoplane 1.45
Rhizosphere 72.83
Stem 0
Stem Tuber 0
Unclassified 2.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1006413 3300001915 Bacteria 2365
2 JGI24737J22298_10000002 3300001990 Bacteria 76949
3 JGI24735J21928_10000042 3300002067 Bacteria 58971
4 JGI24742J22300_10000078 3300002244 Bacteria 14051
5 rootH1_10164107 3300003316 Bacteria 1429
6 rootH2_10000244 3300003320 Bacteria 697651
7 rootH2_10108426 3300003320 Bacteria 2514
8 rootH2_10142145 3300003320 Bacteria 5529
9 rootL2_10020698 3300003322 Bacteria 5829
10 Ga0070658_10000036 3300005327 Bacteria 143743
11 Ga0070658_10000064 3300005327 Bacteria 106537
12 Ga0070683_100000630 3300005329 Bacteria 25350
13 Ga0070683_100817699 3300005329 Bacteria 893
14 Ga0070690_100000331 3300005330 Bacteria 24172
15 Ga0070670_100177383 3300005331 Bacteria 1849
16 Ga0070666_10157012 3300005335 Bacteria 1589
17 Ga0070682_100002918 3300005337 Bacteria 9488
18 Ga0070660_100000185 3300005339 Bacteria 41480
19 Ga0070691_10023135 3300005341 Bacteria 2885
20 Ga0070661_100068322 3300005344 Bacteria 2611
21 Ga0070692_10196235 3300005345 Unclassified 1179
22 Ga0070671_100000001 3300005355 Bacteria 1228151
23 Ga0070659_100001803 3300005366 Bacteria 15403
24 Ga0070667_100000001 3300005367 Bacteria 1108638
25 Ga0070667_100021409 3300005367 Bacteria 5370
26 Ga0070663_100146437 3300005455 Unclassified 1807
27 Ga0070678_100011166 3300005456 Bacteria 5529
28 Ga0070681_10004151 3300005458 Bacteria 13701
29 Ga0070681_10194493 3300005458 Bacteria 1947
30 Ga0070681_10335737 3300005458 Bacteria 1421
31 Ga0070681_10473599 3300005458 Bacteria 1165
32 Ga0070681_10503442 3300005458 Unclassified 1124
33 Ga0070679_100006854 3300005530 Bacteria 10623
34 Ga0070679_100027649 3300005530 Bacteria 5584
35 Ga0070679_100088135 3300005530 Bacteria 3091
36 Ga0070679_100129856 3300005530 Bacteria 2501
37 Ga0070679_100140222 3300005530 Bacteria 2397
38 Ga0070679_100362205 3300005530 Bacteria 1397
39 Ga0070684_100004509 3300005535 Bacteria 10605
40 Ga0070684_100709419 3300005535 Bacteria 938
41 Ga0068853_100079969 3300005539 Bacteria 2859
42 Ga0070686_100014426 3300005544 Bacteria 4557
43 Ga0070665_100143036 3300005548 Bacteria 2395
44 Ga0068855_100000003 3300005563 Bacteria 589862
45 Ga0068855_100002780 3300005563 Bacteria 21542
46 Ga0068855_100081035 3300005563 Bacteria 3763
47 Ga0068855_100311568 3300005563 Bacteria 1741
48 Ga0068857_100000040 3300005577 Bacteria 70513
49 Ga0068857_100055028 3300005577 Bacteria 3531
50 Ga0068856_100001042 3300005614 Bacteria 29439
51 Ga0068856_100758735 3300005614 Bacteria 990
52 Ga0068852_100342055 3300005616 Unclassified 1458
53 Ga0068863_100090748 3300005841 Bacteria 2897
54 Ga0068863_100258364 3300005841 Bacteria 1683
55 Ga0068860_100008163 3300005843 Bacteria 10424
56 Ga0068862_100244129 3300005844 Bacteria 1634
57 Ga0081455_10000003 3300005937 Bacteria 367763
58 Ga0075365_10000021 3300006038 Bacteria 64483
59 Ga0075365_10042879 3300006038 Bacteria 2960
60 Ga0075365_10092495 3300006038 Unclassified 2062
61 Ga0075365_10101115 3300006038 Unclassified 1974
62 Ga0075368_10016522 3300006042 Unclassified 2751
63 Ga0075363_100320118 3300006048 Bacteria 902
64 Ga0075364_10063826 3300006051 Bacteria 2418
65 Ga0075364_10106095 3300006051 Bacteria 1872
66 Ga0075432_10076229 3300006058 Bacteria 1210
67 Ga0075362_10009318 3300006177 Bacteria 3793
68 Ga0075362_10023868 3300006177 Bacteria 2590
69 Ga0075369_10000086 3300006186 Bacteria 24780
70 Ga0075366_10001465 3300006195 Bacteria 11762
71 Ga0075366_10005755 3300006195 Bacteria 6731
72 Ga0075366_10036347 3300006195 Bacteria 2904
73 Ga0075366_10086013 3300006195 Bacteria 1881
74 Ga0097621_100000001 3300006237 Bacteria 632268
75 Ga0097621_100000213 3300006237 Bacteria 38241
76 Ga0075370_10046870 3300006353 Bacteria 2447
77 Ga0075370_10097686 3300006353 Unclassified 1698
78 Ga0075370_10291796 3300006353 Bacteria 969
79 Ga0068871_100000005 3300006358 Bacteria 123210
80 Ga0068871_100000425 3300006358 Bacteria 29068
81 Ga0068871_100326306 3300006358 Unclassified 1353
82 Ga0105240_10000003 3300009093 Bacteria 1183681
83 Ga0105240_10099960 3300009093 Bacteria 3530
84 Ga0105240_10802656 3300009093 Bacteria 1019
85 Ga0111539_10011530 3300009094 Bacteria 11091
86 Ga0105245_10000002 3300009098 Bacteria 634374
87 Ga0105245_10000093 3300009098 Bacteria 86866
88 Ga0105245_10001246 3300009098 Bacteria 22974
89 Ga0105245_10018672 3300009098 Bacteria 6067
90 Ga0105245_10521012 3300009098 Bacteria 1207
91 Ga0105243_10000001 3300009148 Bacteria 1156578
92 Ga0105243_10003883 3300009148 Bacteria 11937
93 Ga0105241_10000007 3300009174 Bacteria 343524
94 Ga0105241_10002472 3300009174 Bacteria 13896
95 Ga0105241_10020767 3300009174 Bacteria 4854
96 Ga0105242_10000002 3300009176 Bacteria 262559
97 Ga0105242_10044497 3300009176 Unclassified 3596
98 Ga0105248_10753751 3300009177 Bacteria 1099
99 Ga0105237_10005792 3300009545 Bacteria 13869
100 Ga0105238_10236730 3300009551 Bacteria 1803
101 Ga0105238_10275330 3300009551 Unclassified 1664
102 Ga0105249_10000950 3300009553 Bacteria 25626
103 Ga0105249_10244523 3300009553 Bacteria 1776
104 Ga0105249_10744434 3300009553 Bacteria 1042
105 Ga0105033_106465 3300009986 Bacteria 1014
106 Ga0105030_102186 3300009987 Bacteria 1711
107 Ga0105239_10006152 3300010375 Bacteria 13967
108 Ga0105246_10028056 3300011119 Unclassified 3695
109 Ga0157373_10000096 3300013100 Bacteria 72510
110 Ga0157373_10051064 3300013100 Bacteria 2945
111 Ga0157373_10284510 3300013100 Bacteria 1172
112 Ga0157371_10002104 3300013102 Bacteria 19431
113 Ga0157370_10142905 3300013104 Bacteria 2229
114 Ga0157369_10000104 3300013105 Bacteria 118133
115 Ga0157369_10032578 3300013105 Bacteria 5730
116 Ga0157374_10000018 3300013296 Bacteria 286683
117 Ga0157374_10020927 3300013296 Bacteria 5811
118 Ga0163162_10025016 3300013306 Bacteria 5898
119 Ga0157514_108922 3300013874 Bacteria 1711
120 Ga0163163_10072230 3300014325 Bacteria 3440
121 Ga0163163_10258749 3300014325 Bacteria 1791
122 Ga0163163_10415284 3300014325 Bacteria 1404
123 Ga0157379_10002810 3300014968 Bacteria 14675
124 Ga0157376_10000007 3300014969 Bacteria 368004
125 Ga0207680_10129054 3300025903 Bacteria 1664
126 Ga0207647_10001056 3300025904 Bacteria 21205
127 Ga0207705_10000104 3300025909 Bacteria 96668
128 Ga0207705_10018580 3300025909 Bacteria 4969
129 Ga0207654_10000002 3300025911 Bacteria 1460142
130 Ga0207654_10007085 3300025911 Bacteria 5650
131 Ga0207654_10009965 3300025911 Bacteria 4830
132 Ga0207707_10007678 3300025912 Bacteria 9394
133 Ga0207707_10057167 3300025912 Bacteria 3395
134 Ga0207707_10512524 3300025912 Bacteria 1022
135 Ga0207695_10000005 3300025913 Bacteria 1196715
136 Ga0207695_10067020 3300025913 Bacteria 3684
137 Ga0207695_10074455 3300025913 Bacteria 3457
138 Ga0207671_10015272 3300025914 Bacteria 6027
139 Ga0207660_10006443 3300025917 Bacteria 7611
140 Ga0207660_10243734 3300025917 Unclassified 1417
141 Ga0207657_10056765 3300025919 Bacteria 3376
142 Ga0207649_10421099 3300025920 Bacteria 1003
143 Ga0207652_10012343 3300025921 Bacteria 6902
144 Ga0207652_10032067 3300025921 Bacteria 4413
145 Ga0207652_10043627 3300025921 Bacteria 3818
146 Ga0207652_10077698 3300025921 Bacteria 2897
147 Ga0207652_10213234 3300025921 Bacteria 1739
148 Ga0207652_10340697 3300025921 Bacteria 1353
149 Ga0207694_10219165 3300025924 Unclassified 1551
150 Ga0207694_10670927 3300025924 Unclassified 874
151 Ga0207650_10039149 3300025925 Bacteria 3464
152 Ga0207687_10000001 3300025927 Bacteria 1130810
153 Ga0207687_10000008 3300025927 Bacteria 497738
154 Ga0207687_10000127 3300025927 Bacteria 51055
155 Ga0207687_10016242 3300025927 Bacteria 4888
156 Ga0207687_10017446 3300025927 Bacteria 4727
157 Ga0207687_10030012 3300025927 Unclassified 3662
158 Ga0207644_10000001 3300025931 Bacteria 1243214
159 Ga0207644_10018853 3300025931 Bacteria 4675
160 Ga0207690_10020904 3300025932 Bacteria 4051
161 Ga0207686_10000001 3300025934 Bacteria 1169580
162 Ga0207709_10000002 3300025935 Bacteria 1171536
163 Ga0207689_10153120 3300025942 Bacteria 1900
164 Ga0207661_10037433 3300025944 Bacteria 3794
165 Ga0207679_10156959 3300025945 Bacteria 1859
166 Ga0207667_10000008 3300025949 Bacteria 625138
167 Ga0207667_10000784 3300025949 Bacteria 41252
168 Ga0207667_10028291 3300025949 Bacteria 6090
169 Ga0207667_10118653 3300025949 Bacteria 2726
170 Ga0207712_10000664 3300025961 Bacteria 26702
171 Ga0207640_10871190 3300025981 Bacteria 785
172 Ga0207658_10000003 3300025986 Bacteria 1151934
173 Ga0207658_10002292 3300025986 Bacteria 14132
174 Ga0207639_10152022 3300026041 Bacteria 1940
175 Ga0207702_10000622 3300026078 Bacteria 39021
176 Ga0207641_10137279 3300026088 Bacteria 2202
177 Ga0207648_10299816 3300026089 Unclassified 1441
178 Ga0207674_10000001 3300026116 Bacteria 616581
179 Ga0207674_10023327 3300026116 Bacteria 6630
180 Ga0207674_10098808 3300026116 Bacteria 2902
181 Ga0207674_10352059 3300026116 Bacteria 1424
182 Ga0207683_10012772 3300026121 Bacteria 7167
183 Ga0207698_10520980 3300026142 Bacteria 1160
184 Ga0209998_10009381 3300027717 Bacteria 2031
185 Ga0207428_10091640 3300027907 Bacteria 2359
186 Ga0268266_10385116 3300028379 Bacteria 1323
187 Ga0268265_10216077 3300028380 Bacteria 1674
188 Ga0268264_10009166 3300028381 Bacteria 8199
189 Ga0268264_11191083 3300028381 Bacteria 771
190 Ga0265319_1065506 3300028563 Bacteria 1171
191 Ga0265334_10000028 3300028573 Bacteria 115200
192 Ga0265338_10000323 3300028800 Bacteria 87009
193 Ga0265338_10000905 3300028800 Bacteria 49902
194 Ga0265338_10006568 3300028800 Bacteria 14758
195 Ga0265338_10053753 3300028800 Unclassified 3599
196 Ga0265338_10154365 3300028800 Bacteria 1780
197 Ga0265340_10000065 3300031247 Bacteria 49264
198 Ga0265327_10003538 3300031251 Bacteria 14808
199 Ga0265327_10003910 3300031251 Bacteria 13696
200 Ga0265314_10332387 3300031711 Bacteria 842
201 Ga0373935_0344670 3300035692 Bacteria 1061
202 Ga0395900_0005156 3300037418 Bacteria 13724
203 Ga0395900_0007057 3300037418 Bacteria 11629
204 Ga0395900_0279859 3300037418 Bacteria 1660
205 Ga0395900_0282310 3300037418 Bacteria 1652
206 Ga0395900_0936427 3300037418 Bacteria 788
207 Ga0395898_0026588 3300037466 Bacteria 5820
208 Ga0395898_0303616 3300037466 Bacteria 1523
209 Ga0395905_0011778 3300037471 Bacteria 8443
210 Ga0395905_0692597 3300037471 Bacteria 921
211 Ga0395901_0000738 3300038443 Bacteria 36950
212 Ga0395901_0001401 3300038443 Bacteria 25185
213 Ga0395901_0033068 3300038443 Bacteria 5337
214 Ga0395901_0411549 3300038443 Bacteria 1388
215 Ga0451807_0029127 3300041486 Bacteria 1100
216 Ga0495583_0212725 3300046506 Bacteria 783
217 Ga0495587_0028558 3300046536 Bacteria 3392
218 Ga0495622_0000051 3300046557 Bacteria 105674
219 Ga0495588_0000173 3300046674 Bacteria 81355
220 Ga0495658_0000721 3300046683 Bacteria 17864
221 Ga0495649_0000057 3300046694 Bacteria 99739
222 Ga0495600_0030341 3300046809 Unclassified 3502
223 Ga0496105_0554891 3300048908 Bacteria 896
224 Ga0496109_0525561 3300048912 Archaea 1117
225 Ga0496112_0284187 3300048915 Bacteria 1601
226 Ga0496125_0066311 3300048928 Unclassified 2854
227 Ga0496126_0063301 3300048929 Bacteria 3316
228 Ga0501080_0000106 3300049742 Bacteria 57580
229 Ga0501083_0032911 3300049744 Bacteria 3552
230 nmdc:mga03683_50_c1 3300050489 Bacteria 42495
231 nmdc:mga03683_74921_c1 3300050489 Bacteria 1452
232 nmdc:mga03n38_23132_c1 3300050490 Bacteria 2524
233 nmdc:mga00v17_28646_c1 3300050491 Bacteria 3263
234 nmdc:mga0yw44_13_c1 3300050492 Bacteria 120183
235 nmdc:mga0yw44_36514_c1 3300050492 Bacteria 2896
236 nmdc:mga0yw44_47421_c1 3300050492 Bacteria 2586
237 nmdc:mga0yw44_72685_c1 3300050492 Bacteria 2138
238 nmdc:mga0yw44_91595_c1 3300050492 Unclassified 1922
239 nmdc:mga0k408_33_c1 3300050493 Bacteria 23674
240 nmdc:mga0k408_58_c1 3300050493 Bacteria 28391
241 nmdc:mga0k408_6882_c1 3300050493 Bacteria 6068
242 nmdc:mga06z11_116_c1 3300050494 Bacteria 32792
243 nmdc:mga04h51_8104_c1 3300050495 Unclassified 2801
244 nmdc:mga07m45_279139_c1 3300050496 Bacteria 972
245 nmdc:mga07m45_31859_c1 3300050496 Bacteria 2922
246 nmdc:mga08y16_11165_c1 3300050511 Bacteria 9433
247 nmdc:mga0sz30_1_c1 3300050516 Bacteria 796501
248 Ga0500610_0000002 3300053079 Bacteria 166752
249 Ga0500610_0006693 3300053079 Bacteria 4861
250 Ga0500643_000010 3300053087 Bacteria 408084
251 Ga0500643_000512 3300053087 Bacteria 27514
252 Ga0500643_008752 3300053087 Bacteria 3943
253 Ga0500644_0000255 3300053088 Bacteria 30121
254 Ga0500644_0000454 3300053088 Bacteria 18751
255 Ga0500644_0002237 3300053088 Bacteria 4882
256 Ga0500583_0000057 3300053092 Bacteria 71874
257 Ga0500583_0013450 3300053092 Bacteria 3166
258 Ga0500583_0016770 3300053092 Bacteria 2933
259 Ga0500651_0000051 3300053093 Bacteria 76584
260 Ga0500651_0003690 3300053093 Bacteria 8435
261 Ga0500651_0194133 3300053093 Unclassified 1200
262 Ga0500566_0000001 3300053094 Bacteria 1101031
263 Ga0500594_0000100 3300053118 Bacteria 25421
264 Ga0500614_000001 3300053123 Bacteria 1274484
265 Ga0500614_001037 3300053123 Bacteria 6922
266 Ga0500614_021543 3300053123 Bacteria 1496
267 Ga0500628_000009 3300053129 Bacteria 122386
268 Ga0500628_001825 3300053129 Bacteria 3596
269 Ga0500642_0037998 3300053130 Unclassified 2061
270 Ga0500568_0088016 3300053139 Bacteria 1173
271 Ga0500589_000002 3300053147 Bacteria 245055
272 Ga0500589_029981 3300053147 Bacteria 2532
273 Ga0500604_0086511 3300053151 Bacteria 1019
274 Ga0500649_000002 3300053722 Bacteria 145889
275 Ga0500611_000966 3300053727 Bacteria 3022
276 Ga0500611_014474 3300053727 Unclassified 1377

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053129 Ga0500628_001825 Ga0500628_001825_349_942 145
2 3300006038 Ga0075365_10092495 Ga0075365_100924953 154
3 3300050492 nmdc:mga0yw44_91595_c1 nmdc:mga0yw44_91595_c1_971_1567 154
4 3300053139 Ga0500568_0088016 Ga0500568_0088016_140_739 155
5 3300053087 Ga0500643_000010 Ga0500643_000010_26983_27582 158
6 3300041486 Ga0451807_0029127 Ga0451807_0029127_391_990 159
7 3300053079 Ga0500610_0000002 Ga0500610_0000002_34653_35252 159
8 3300053079 Ga0500610_0006693 Ga0500610_0006693_283_882 159
9 3300053088 Ga0500644_0000255 Ga0500644_0000255_3697_4296 159
10 3300053092 Ga0500583_0000057 Ga0500583_0000057_10515_11114 159
11 3300053093 Ga0500651_0194133 Ga0500651_0194133_145_744 159
12 3300053130 Ga0500642_0037998 Ga0500642_0037998_1079_1678 159
13 3300053147 Ga0500589_000002 Ga0500589_000002_161898_162497 159
14 3300006038 Ga0075365_10042879 Ga0075365_100428793 160
15 3300025942 Ga0207689_10153120 Ga0207689_101531202 160
16 3300027907 Ga0207428_10091640 Ga0207428_100916403 160
17 3300050492 nmdc:mga0yw44_36514_c1 nmdc:mga0yw44_36514_c1_1198_1797 160
18 3300053087 Ga0500643_008752 Ga0500643_008752_3157_3756 160
19 3300005841 Ga0068863_100090748 Ga0068863_1000907481 165
20 3300048928 Ga0496125_0066311 Ga0496125_0066311_1822_2418 165
21 3300005548 Ga0070665_100143036 Ga0070665_1001430362 167
22 3300028379 Ga0268266_10385116 Ga0268266_103851162 167
23 3300053087 Ga0500643_000512 Ga0500643_000512_19775_20371 167
24 3300053088 Ga0500644_0002237 Ga0500644_0002237_2564_3163 167
25 3300053092 Ga0500583_0013450 Ga0500583_0013450_724_1320 167
26 3300053118 Ga0500594_0000100 Ga0500594_0000100_3262_3861 167
27 3300053129 Ga0500628_000009 Ga0500628_000009_30168_30767 167
28 3300053147 Ga0500589_029981 Ga0500589_029981_424_1020 167
29 3300053727 Ga0500611_014474 Ga0500611_014474_558_1154 167
30 3300037418 Ga0395900_0936427 Ga0395900_0936427_118_714 168
31 3300005327 Ga0070658_10000064 Ga0070658_10000064106 169
32 3300025909 Ga0207705_10000104 Ga0207705_1000010431 169
33 3300005335 Ga0070666_10157012 Ga0070666_101570122 170
34 3300005355 Ga0070671_100000001 Ga0070671_10000000151 170
35 3300025903 Ga0207680_10129054 Ga0207680_101290542 170
36 3300025931 Ga0207644_10000001 Ga0207644_1000000133 170
37 3300005337 Ga0070682_100002918 Ga0070682_1000029186 171
38 3300005367 Ga0070667_100021409 Ga0070667_1000214092 171
39 3300005456 Ga0070678_100011166 Ga0070678_1000111664 171
40 3300006038 Ga0075365_10101115 Ga0075365_101011154 171
41 3300025986 Ga0207658_10002292 Ga0207658_100022925 171
42 3300026121 Ga0207683_10012772 Ga0207683_100127725 171
43 3300028381 Ga0268264_11191083 Ga0268264_111910831 171
44 3300028800 Ga0265338_10006568 Ga0265338_100065689 171
45 3300050492 nmdc:mga0yw44_72685_c1 nmdc:mga0yw44_72685_c1_1436_2032 171
46 3300005937 Ga0081455_10000003 Ga0081455_1000000314 173
47 3300027717 Ga0209998_10009381 Ga0209998_100093812 174
48 3300028800 Ga0265338_10053753 Ga0265338_100537534 175
49 3300035692 Ga0373935_0344670 Ga0373935_0344670_85_681 176
50 3300005331 Ga0070670_100177383 Ga0070670_1001773832 177
51 3300005367 Ga0070667_100000001 Ga0070667_1000000011126 177
52 3300005843 Ga0068860_100008163 Ga0068860_1000081635 177
53 3300006042 Ga0075368_10016522 Ga0075368_100165224 177
54 3300006058 Ga0075432_10076229 Ga0075432_100762292 177
55 3300006195 Ga0075366_10001465 Ga0075366_100014653 177
56 3300025925 Ga0207650_10039149 Ga0207650_100391492 177
57 3300025986 Ga0207658_10000003 Ga0207658_10000003256 177
58 3300028381 Ga0268264_10009166 Ga0268264_100091668 177
59 3300050493 nmdc:mga0k408_6882_c1 nmdc:mga0k408_6882_c1_4370_4963 177
60 3300050494 nmdc:mga06z11_116_c1 nmdc:mga06z11_116_c1_22039_22632 177
61 3300050495 nmdc:mga04h51_8104_c1 nmdc:mga04h51_8104_c1_68_661 177
62 3300001915 JGI24741J21665_1006413 JGI24741J21665_10064132 178
63 3300001990 JGI24737J22298_10000002 JGI24737J22298_1000000288 178
64 3300002067 JGI24735J21928_10000042 JGI24735J21928_1000004265 178
65 3300002244 JGI24742J22300_10000078 JGI24742J22300_100000785 178
66 3300003316 rootH1_10164107 rootH1_101641072 178
67 3300003320 rootH2_10000244 rootH2_1000024437 178
68 3300003320 rootH2_10108426 rootH2_101084263 178
69 3300003320 rootH2_10142145 rootH2_101421452 178
70 3300003322 rootL2_10020698 rootL2_100206984 178
71 3300005327 Ga0070658_10000036 Ga0070658_1000003644 178
72 3300005329 Ga0070683_100000630 Ga0070683_1000006303 178
73 3300005329 Ga0070683_100817699 Ga0070683_1008176992 178
74 3300005330 Ga0070690_100000331 Ga0070690_10000033126 178
75 3300005339 Ga0070660_100000185 Ga0070660_10000018518 178
76 3300005341 Ga0070691_10023135 Ga0070691_100231352 178
77 3300005344 Ga0070661_100068322 Ga0070661_1000683222 178
78 3300005345 Ga0070692_10196235 Ga0070692_101962352 178
79 3300005366 Ga0070659_100001803 Ga0070659_10000180314 178
80 3300005455 Ga0070663_100146437 Ga0070663_1001464372 178
81 3300005458 Ga0070681_10004151 Ga0070681_100041518 178
82 3300005458 Ga0070681_10194493 Ga0070681_101944933 178
83 3300005458 Ga0070681_10335737 Ga0070681_103357371 178
84 3300005458 Ga0070681_10473599 Ga0070681_104735992 178
85 3300005458 Ga0070681_10503442 Ga0070681_105034422 178
86 3300005530 Ga0070679_100006854 Ga0070679_1000068548 178
87 3300005530 Ga0070679_100027649 Ga0070679_1000276493 178
88 3300005530 Ga0070679_100088135 Ga0070679_1000881351 178
89 3300005530 Ga0070679_100129856 Ga0070679_1001298562 178
90 3300005530 Ga0070679_100140222 Ga0070679_1001402222 178
91 3300005530 Ga0070679_100362205 Ga0070679_1003622052 178
92 3300005535 Ga0070684_100004509 Ga0070684_1000045094 178
93 3300005535 Ga0070684_100709419 Ga0070684_1007094192 178
94 3300005539 Ga0068853_100079969 Ga0068853_1000799695 178
95 3300005544 Ga0070686_100014426 Ga0070686_1000144262 178
96 3300005563 Ga0068855_100000003 Ga0068855_100000003625 178
97 3300005563 Ga0068855_100002780 Ga0068855_10000278013 178
98 3300005563 Ga0068855_100081035 Ga0068855_1000810355 178
99 3300005563 Ga0068855_100311568 Ga0068855_1003115683 178
100 3300005577 Ga0068857_100000040 Ga0068857_10000004039 178
101 3300005577 Ga0068857_100055028 Ga0068857_1000550283 178
102 3300005614 Ga0068856_100001042 Ga0068856_10000104233 178
103 3300005614 Ga0068856_100758735 Ga0068856_1007587352 178
104 3300005616 Ga0068852_100342055 Ga0068852_1003420552 178
105 3300005841 Ga0068863_100258364 Ga0068863_1002583643 178
106 3300005844 Ga0068862_100244129 Ga0068862_1002441292 178
107 3300006038 Ga0075365_10000021 Ga0075365_1000002116 178
108 3300006048 Ga0075363_100320118 Ga0075363_1003201181 178
109 3300006051 Ga0075364_10063826 Ga0075364_100638263 178
110 3300006051 Ga0075364_10106095 Ga0075364_101060952 178
111 3300006177 Ga0075362_10009318 Ga0075362_100093182 178
112 3300006177 Ga0075362_10023868 Ga0075362_100238682 178
113 3300006186 Ga0075369_10000086 Ga0075369_1000008624 178
114 3300006195 Ga0075366_10005755 Ga0075366_100057555 178
115 3300006195 Ga0075366_10036347 Ga0075366_100363473 178
116 3300006195 Ga0075366_10086013 Ga0075366_100860133 178
117 3300006237 Ga0097621_100000001 Ga0097621_100000001123 178
118 3300006237 Ga0097621_100000213 Ga0097621_10000021335 178
119 3300006353 Ga0075370_10046870 Ga0075370_100468702 178
120 3300006353 Ga0075370_10097686 Ga0075370_100976862 178
121 3300006353 Ga0075370_10291796 Ga0075370_102917962 178
122 3300006358 Ga0068871_100000005 Ga0068871_100000005107 178
123 3300006358 Ga0068871_100000425 Ga0068871_10000042529 178
124 3300006358 Ga0068871_100326306 Ga0068871_1003263061 178
125 3300009093 Ga0105240_10000003 Ga0105240_100000031241 178
126 3300009093 Ga0105240_10099960 Ga0105240_100999603 178
127 3300009093 Ga0105240_10802656 Ga0105240_108026561 178
128 3300009094 Ga0111539_10011530 Ga0111539_100115308 178
129 3300009098 Ga0105245_10000002 Ga0105245_10000002631 178
130 3300009098 Ga0105245_10000093 Ga0105245_1000009332 178
131 3300009098 Ga0105245_10001246 Ga0105245_100012462 178
132 3300009098 Ga0105245_10018672 Ga0105245_100186727 178
133 3300009098 Ga0105245_10521012 Ga0105245_105210122 178
134 3300009148 Ga0105243_10000001 Ga0105243_1000000138 178
135 3300009148 Ga0105243_10003883 Ga0105243_100038839 178
136 3300009174 Ga0105241_10000007 Ga0105241_1000000743 178
137 3300009174 Ga0105241_10002472 Ga0105241_100024726 178
138 3300009174 Ga0105241_10020767 Ga0105241_100207674 178
139 3300009176 Ga0105242_10000002 Ga0105242_10000002244 178
140 3300009176 Ga0105242_10044497 Ga0105242_100444973 178
141 3300009177 Ga0105248_10753751 Ga0105248_107537512 178
142 3300009545 Ga0105237_10005792 Ga0105237_1000579214 178
143 3300009551 Ga0105238_10236730 Ga0105238_102367302 178
144 3300009551 Ga0105238_10275330 Ga0105238_102753303 178
145 3300009553 Ga0105249_10000950 Ga0105249_1000095011 178
146 3300009553 Ga0105249_10244523 Ga0105249_102445232 178
147 3300009553 Ga0105249_10744434 Ga0105249_107444341 178
148 3300009986 Ga0105033_106465 Ga0105033_1064652 178
149 3300009987 Ga0105030_102186 Ga0105030_1021861 178
150 3300010375 Ga0105239_10006152 Ga0105239_100061526 178
151 3300011119 Ga0105246_10028056 Ga0105246_100280566 178
152 3300013100 Ga0157373_10000096 Ga0157373_1000009631 178
153 3300013100 Ga0157373_10051064 Ga0157373_100510642 178
154 3300013100 Ga0157373_10284510 Ga0157373_102845101 178
155 3300013102 Ga0157371_10002104 Ga0157371_1000210417 178
156 3300013104 Ga0157370_10142905 Ga0157370_101429051 178
157 3300013105 Ga0157369_10000104 Ga0157369_1000010419 178
158 3300013105 Ga0157369_10032578 Ga0157369_100325785 178
159 3300013296 Ga0157374_10000018 Ga0157374_1000001836 178
160 3300013296 Ga0157374_10020927 Ga0157374_100209274 178
161 3300013306 Ga0163162_10025016 Ga0163162_100250162 178
162 3300013874 Ga0157514_108922 Ga0157514_1089221 178
163 3300014325 Ga0163163_10072230 Ga0163163_100722304 178
164 3300014325 Ga0163163_10258749 Ga0163163_102587492 178
165 3300014325 Ga0163163_10415284 Ga0163163_104152842 178
166 3300014968 Ga0157379_10002810 Ga0157379_1000281016 178
167 3300014969 Ga0157376_10000007 Ga0157376_1000000753 178
168 3300025904 Ga0207647_10001056 Ga0207647_1000105613 178
169 3300025909 Ga0207705_10018580 Ga0207705_100185804 178
170 3300025911 Ga0207654_10000002 Ga0207654_100000021504 178
171 3300025911 Ga0207654_10007085 Ga0207654_100070851 178
172 3300025911 Ga0207654_10009965 Ga0207654_100099655 178
173 3300025912 Ga0207707_10007678 Ga0207707_100076789 178
174 3300025912 Ga0207707_10057167 Ga0207707_100571672 178
175 3300025912 Ga0207707_10512524 Ga0207707_105125242 178
176 3300025913 Ga0207695_10000005 Ga0207695_100000051252 178
177 3300025913 Ga0207695_10067020 Ga0207695_100670204 178
178 3300025913 Ga0207695_10074455 Ga0207695_100744553 178
179 3300025914 Ga0207671_10015272 Ga0207671_100152725 178
180 3300025917 Ga0207660_10006443 Ga0207660_100064434 178
181 3300025917 Ga0207660_10243734 Ga0207660_102437342 178
182 3300025919 Ga0207657_10056765 Ga0207657_100567654 178
183 3300025920 Ga0207649_10421099 Ga0207649_104210992 178
184 3300025921 Ga0207652_10012343 Ga0207652_100123434 178
185 3300025921 Ga0207652_10032067 Ga0207652_100320674 178
186 3300025921 Ga0207652_10043627 Ga0207652_100436275 178
187 3300025921 Ga0207652_10077698 Ga0207652_100776982 178
188 3300025921 Ga0207652_10213234 Ga0207652_102132342 178
189 3300025921 Ga0207652_10340697 Ga0207652_103406973 178
190 3300025924 Ga0207694_10219165 Ga0207694_102191653 178
191 3300025924 Ga0207694_10670927 Ga0207694_106709272 178
192 3300025927 Ga0207687_10000001 Ga0207687_10000001580 178
193 3300025927 Ga0207687_10000008 Ga0207687_10000008470 178
194 3300025927 Ga0207687_10000127 Ga0207687_1000012732 178
195 3300025927 Ga0207687_10016242 Ga0207687_100162424 178
196 3300025927 Ga0207687_10017446 Ga0207687_100174461 178
197 3300025927 Ga0207687_10030012 Ga0207687_100300123 178
198 3300025931 Ga0207644_10018853 Ga0207644_100188535 178
199 3300025932 Ga0207690_10020904 Ga0207690_100209042 178
200 3300025934 Ga0207686_10000001 Ga0207686_100000011106 178
201 3300025935 Ga0207709_10000002 Ga0207709_100000021223 178
202 3300025944 Ga0207661_10037433 Ga0207661_100374333 178
203 3300025945 Ga0207679_10156959 Ga0207679_101569592 178
204 3300025949 Ga0207667_10000008 Ga0207667_10000008615 178
205 3300025949 Ga0207667_10000784 Ga0207667_1000078414 178
206 3300025949 Ga0207667_10028291 Ga0207667_100282912 178
207 3300025949 Ga0207667_10118653 Ga0207667_101186534 178
208 3300025961 Ga0207712_10000664 Ga0207712_1000066427 178
209 3300025981 Ga0207640_10871190 Ga0207640_108711902 178
210 3300026041 Ga0207639_10152022 Ga0207639_101520222 178
211 3300026078 Ga0207702_10000622 Ga0207702_1000062211 178
212 3300026088 Ga0207641_10137279 Ga0207641_101372793 178
213 3300026089 Ga0207648_10299816 Ga0207648_102998162 178
214 3300026116 Ga0207674_10000001 Ga0207674_1000000139 178
215 3300026116 Ga0207674_10023327 Ga0207674_100233275 178
216 3300026116 Ga0207674_10098808 Ga0207674_100988083 178
217 3300026116 Ga0207674_10352059 Ga0207674_103520591 178
218 3300026142 Ga0207698_10520980 Ga0207698_105209802 178
219 3300028380 Ga0268265_10216077 Ga0268265_102160772 178
220 3300028563 Ga0265319_1065506 Ga0265319_10655062 178
221 3300028573 Ga0265334_10000028 Ga0265334_1000002821 178
222 3300028800 Ga0265338_10000323 Ga0265338_1000032344 178
223 3300028800 Ga0265338_10000905 Ga0265338_1000090538 178
224 3300028800 Ga0265338_10154365 Ga0265338_101543652 178
225 3300031247 Ga0265340_10000065 Ga0265340_1000006519 178
226 3300031251 Ga0265327_10003538 Ga0265327_100035388 178
227 3300031251 Ga0265327_10003910 Ga0265327_1000391014 178
228 3300031711 Ga0265314_10332387 Ga0265314_103323871 178
229 3300037418 Ga0395900_0005156 Ga0395900_0005156_1414_2013 178
230 3300037418 Ga0395900_0007057 Ga0395900_0007057_7205_7801 178
231 3300037418 Ga0395900_0279859 Ga0395900_0279859_454_1050 178
232 3300037418 Ga0395900_0282310 Ga0395900_0282310_240_836 178
233 3300037466 Ga0395898_0026588 Ga0395898_0026588_4997_5593 178
234 3300037466 Ga0395898_0303616 Ga0395898_0303616_130_729 178
235 3300037471 Ga0395905_0011778 Ga0395905_0011778_1837_2433 178
236 3300037471 Ga0395905_0692597 Ga0395905_0692597_274_870 178
237 3300038443 Ga0395901_0000738 Ga0395901_0000738_19381_19977 178
238 3300038443 Ga0395901_0001401 Ga0395901_0001401_23521_24117 178
239 3300038443 Ga0395901_0033068 Ga0395901_0033068_1219_1818 178
240 3300038443 Ga0395901_0411549 Ga0395901_0411549_232_828 178
241 3300046506 Ga0495583_0212725 Ga0495583_0212725_35_634 178
242 3300046536 Ga0495587_0028558 Ga0495587_0028558_2191_2787 178
243 3300046557 Ga0495622_0000051 Ga0495622_0000051_84881_85477 178
244 3300046674 Ga0495588_0000173 Ga0495588_0000173_44296_44892 178
245 3300046683 Ga0495658_0000721 Ga0495658_0000721_7570_8166 178
246 3300046694 Ga0495649_0000057 Ga0495649_0000057_5321_5917 178
247 3300046809 Ga0495600_0030341 Ga0495600_0030341_623_1219 178
248 3300048908 Ga0496105_0554891 Ga0496105_0554891_221_817 178
249 3300048912 Ga0496109_0525561 Ga0496109_0525561_46_645 178
250 3300048915 Ga0496112_0284187 Ga0496112_0284187_739_1335 178
251 3300048929 Ga0496126_0063301 Ga0496126_0063301_2480_3076 178
252 3300049742 Ga0501080_0000106 Ga0501080_0000106_8917_9516 178
253 3300049744 Ga0501083_0032911 Ga0501083_0032911_2110_2706 178
254 3300050489 nmdc:mga03683_50_c1 nmdc:mga03683_50_c1_1408_2004 178
255 3300050489 nmdc:mga03683_74921_c1 nmdc:mga03683_74921_c1_165_761 178
256 3300050490 nmdc:mga03n38_23132_c1 nmdc:mga03n38_23132_c1_1892_2488 178
257 3300050491 nmdc:mga00v17_28646_c1 nmdc:mga00v17_28646_c1_1316_1912 178
258 3300050492 nmdc:mga0yw44_13_c1 nmdc:mga0yw44_13_c1_68571_69167 178
259 3300050492 nmdc:mga0yw44_47421_c1 nmdc:mga0yw44_47421_c1_381_980 178
260 3300050493 nmdc:mga0k408_33_c1 nmdc:mga0k408_33_c1_21798_22397 178
261 3300050493 nmdc:mga0k408_58_c1 nmdc:mga0k408_58_c1_6858_7457 178
262 3300050496 nmdc:mga07m45_279139_c1 nmdc:mga07m45_279139_c1_156_755 178
263 3300050496 nmdc:mga07m45_31859_c1 nmdc:mga07m45_31859_c1_1352_1948 178
264 3300050511 nmdc:mga08y16_11165_c1 nmdc:mga08y16_11165_c1_4123_4719 178
265 3300050516 nmdc:mga0sz30_1_c1 nmdc:mga0sz30_1_c1_785651_786247 178
266 3300053088 Ga0500644_0000454 Ga0500644_0000454_15522_16121 178
267 3300053092 Ga0500583_0016770 Ga0500583_0016770_891_1490 178
268 3300053093 Ga0500651_0000051 Ga0500651_0000051_32453_33049 178
269 3300053093 Ga0500651_0003690 Ga0500651_0003690_1131_1727 178
270 3300053094 Ga0500566_0000001 Ga0500566_0000001_1016903_1017499 178
271 3300053123 Ga0500614_000001 Ga0500614_000001_1119777_1120373 178
272 3300053123 Ga0500614_001037 Ga0500614_001037_1392_1988 178
273 3300053123 Ga0500614_021543 Ga0500614_021543_249_845 178
274 3300053151 Ga0500604_0086511 Ga0500604_0086511_343_942 178
275 3300053722 Ga0500649_000002 Ga0500649_000002_2473_3069 178
276 3300053727 Ga0500611_000966 Ga0500611_000966_1239_1838 178

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00889

EF_TS

Elongation factor TS

8

196

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6q01-assembly1.cif.gz_C tdp2 uba domain bound to ubiquitin at 0.85 angstroms resolution, crystal form 2 0.9979 6 39
6q00-assembly1.cif.gz_B tdp2 uba domain bound to ubiquitin at 0.85 angstroms resolution, crystal form 1 0.9975 6 39
6q01-assembly2.cif.gz_D tdp2 uba domain bound to ubiquitin at 0.85 angstroms resolution, crystal form 2 0.9769 6 40
1tr8-assembly1.cif.gz_A crystal structure of archaeal nascent polypeptide-associated complex (aenac) 0.9641 1 39
6c95-assembly1.cif.gz_D the human nata (naa10/naa15) amino-terminal acetyltransferase complex bound to hypk 0.9571 1 40
ID Description Score Start End Superfamily
4s12C02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9713 7 36 1.10.8.1080
af_O35987_1_46_1.10.8.10 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.9624 6 44 1.10.8.10
af_P34223_2_49_1.10.8.10 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.9533 1 43 1.10.8.10
af_F4K250_115_368_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9447 1 40 1.25.40.10
af_Q80X50_30_89_1.10.8.10 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.9391 6 40 1.10.8.10
ID Description Score Start End GO Terms
AF-A0A0G9HD00-F1-model_v4 Uncharacterized protein 0.9275 50 177 GO:0003746
AF-A0A1J1ELH1-F1-model_v4 deleted 0.9151 48 173
AF-A0A1H1A6G9-F1-model_v4 Elongation factor TS 0.9007 50 178 GO:0003746
AF-A0A7C5HTP9-F1-model_v4 Elongation factor Ts 0.8996 61 172 GO:0003746
GO:0005737
AF-A0A536M1S8-F1-model_v4 Elongation factor Ts 0.8825 49 176 GO:0003746

Feature Viewer

pLDDT pTM Quality
83.39 0.67 Medium
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Predicted Structure (AlphaFold2)

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