F380719

General Info

Members Datasets Scaffolds Average Seq Length
275 218 153 404

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0224695|Ga0501047_0224695_121_1353
Length 403
Sequence MTLSAKRILLVIGGGIAAYKVLDLIRRLRERGAAVRPVMTAAAQEFITPLSVGALAADHVFTDLFDRQDEQDVGHIRLARNADLVVVAPATADLMAKLANSAVLLATDRPVLFAPAMNPRMWAHPATRRNRATLERDGVRFVGPAKGEMAESGEAGEGRMAEPLEIVAAVEALLDERPKPLAGKRIIVTSGPTHEPIDPVRYIANRSSGKQGHAIAAALAMLGADVRLVSGPVTIADPVGVQTTHVETAREMQAAVEGFLPADAAVFVAAVADWRTANSADEKIKKVAGEGPPALQMVENPDILAGIGHHARRPRLVVGFAAETQDVLKNAEAKLKKKGADFIVANDVSQGSGIGGSGVMGGERNRVRVVSKAGVEEWPEMSKDEVAARLASLIAEKLKTISV

Samples

Sample ID Description Type Environment
1 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
2 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
3 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
4 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
5 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
6 2534681786 Brucella suis 92/29 Isolate Unclassified
7 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
8 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
9 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
10 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
11 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
12 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
13 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
14 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
15 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
16 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
17 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
18 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
19 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
20 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
21 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
22 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
23 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
24 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
25 2643221557 Ensifer sp. Root558 Isolate Unclassified
26 2643221568 Rhizobium sp. Root564 Isolate Unclassified
27 2643221582 Rhizobium sp. Root651 Isolate Unclassified
28 2643221610 Ensifer sp. Root74 Isolate Unclassified
29 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
30 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
31 2643221668 Ensifer sp. Root423 Isolate Unclassified
32 2643221675 Ensifer sp. Root1298 Isolate Unclassified
33 2643221680 Ensifer sp. Root1312 Isolate Unclassified
34 2643221693 Rhizobium sp. Root491 Isolate Unclassified
35 2643221723 Ensifer sp. Root278 Isolate Unclassified
36 2643221726 Ensifer sp. Root954 Isolate Unclassified
37 2738541293 Rhizobium sp. GV031 Isolate Unclassified
38 2751185800 Brucella pituitosa AA2 Isolate Unclassified
39 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
40 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
41 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
42 2791355260 Rhizobium sp. L9 Isolate Nodule
43 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
44 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
45 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
46 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
47 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
48 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
49 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
50 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
51 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
52 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
53 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
54 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
55 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
56 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
57 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
58 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
59 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
60 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
61 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
62 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
63 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
64 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
65 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
66 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
67 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
68 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
69 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
70 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
71 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
72 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
73 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
74 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
75 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
76 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
77 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
78 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
79 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
80 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
81 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
82 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
83 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
84 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
85 2854911287 Brucella lupini LUP21 Isolate Unclassified
86 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
87 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
88 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
89 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
90 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
91 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
92 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
93 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
94 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
95 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
96 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
97 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
98 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
99 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
100 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
101 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
102 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
103 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
104 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
105 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
106 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
107 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
108 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
109 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
110 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
111 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
112 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
113 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
114 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
115 2996887358 Rhizobium sp. R711 Isolate Nodule
116 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
117 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
118 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
119 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
120 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
121 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
122 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
123 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
124 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
125 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
126 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
127 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
128 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
129 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
130 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
131 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
132 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
133 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
134 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
135 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
136 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
137 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
138 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
139 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
140 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
141 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
142 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
143 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
144 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
145 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
146 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
147 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
148 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
149 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
150 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
151 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
152 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
153 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
154 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
155 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
156 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
157 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
158 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
159 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
160 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
161 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
162 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
164 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
165 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
166 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
167 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
168 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
169 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
170 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
171 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
172 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
173 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
176 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
177 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
178 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
179 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
180 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
181 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
182 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
183 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
191 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
192 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
193 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
194 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
197 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
198 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
199 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
200 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
201 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
202 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
203 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
204 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
205 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
206 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
207 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
208 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
209 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
210 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
211 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
212 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
213 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
214 8005258706 Rhizobium sp. R693 Isolate Nodule
215 8005321885 Rhizobium sp. R72 Isolate Nodule
216 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
217 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
218 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 55.64
Metatranscriptomes 0
Isolates 44.36

Biome Distribution

Category Percentage (%)
Aerial Root 1.82
Bulb 0
Endosphere 26.91
Nodule 19.64
Rhizoplane 2.91
Rhizosphere 22.18
Stem 0
Stem Tuber 0
Unclassified 26.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1004580 3300002773 Bacteria 4307
2 JGI25165J46597_1000607 3300003214 Bacteria 30530
3 JGI25160J50197_1001461 3300003354 Bacteria 11777
4 JGI25160J50197_1012351 3300003354 Bacteria 2969
5 JGI25161J50226_1000426 3300003374 Bacteria 20014
6 Ga0055526_1000639 3300003771 Bacteria 27197
7 Ga0055526_1012325 3300003771 Bacteria 3745
8 Ga0055524_1003540 3300003775 Bacteria 7548
9 Ga0055524_1019944 3300003775 Bacteria 2275
10 Ga0055536_1013036 3300003781 Bacteria 3032
11 Ga0055528_1000564 3300003790 Bacteria 28157
12 Ga0055528_1008600 3300003790 Bacteria 4348
13 Ga0058692_1002583 3300003856 Bacteria 5992
14 Ga0055543_1000223 3300004625 Bacteria 45570
15 Ga0055543_1000359 3300004625 Bacteria 30667
16 Ga0065165_1000025 3300005262 Bacteria 246909
17 Ga0065165_1001919 3300005262 Bacteria 19855
18 Ga0065165_1011316 3300005262 Bacteria 3741
19 Ga0070665_100020849 3300005548 Bacteria 6587
20 Ga0075365_10000703 3300006038 Bacteria 13456
21 Ga0075365_10021772 3300006038 Bacteria 4005
22 Ga0075364_10007629 3300006051 Bacteria 6433
23 Ga0075367_10006589 3300006178 Bacteria 5881
24 Ga0075367_10091324 3300006178 Bacteria 1852
25 Ga0075369_10004107 3300006186 Bacteria 5358
26 Ga0075369_10009433 3300006186 Bacteria 3792
27 Ga0075369_10096151 3300006186 Bacteria 1325
28 Ga0075366_10065789 3300006195 Bacteria 2156
29 Ga0079104_1000033 3300006946 Bacteria 202636
30 Ga0099826_10013685 3300006948 Bacteria 6132
31 Ga0099826_10025317 3300006948 Bacteria 4402
32 Ga0105251_10009606 3300009011 Bacteria 5696
33 Ga0105248_10048959 3300009177 Bacteria 4741
34 Ga0105249_10303617 3300009553 Bacteria 1602
35 Ga0157373_10005437 3300013100 Bacteria 9567
36 Ga0157371_10000004 3300013102 Bacteria 512593
37 Ga0157371_10015366 3300013102 Bacteria 5745
38 Ga0157370_10000165 3300013104 Bacteria 81259
39 Ga0171463_1001 3300013249 Bacteria 1406070
40 Ga0183363_1135 3300015690 Bacteria 18828
41 Ga0209436_101064 3300025208 Bacteria 10394
42 Ga0209437_100056 3300025233 Bacteria 363071
43 Ga0209129_1001949 3300025258 Bacteria 10778
44 Ga0209233_1000071 3300025261 Bacteria 363290
45 Ga0209673_1000135 3300025273 Bacteria 160333
46 Ga0209130_1000005 3300025284 Bacteria 599620
47 Ga0209676_1003075 3300025292 Bacteria 10755
48 Ga0209676_1012393 3300025292 Bacteria 3353
49 Ga0209025_1000060 3300025294 Bacteria 305017
50 Ga0209025_1000105 3300025294 Bacteria 224157
51 Ga0209025_1024923 3300025294 Bacteria 3068
52 Ga0209564_1000138 3300025295 Bacteria 181512
53 Ga0209564_1000217 3300025295 Bacteria 131090
54 Ga0209564_1010364 3300025295 Bacteria 4302
55 Ga0209758_1000170 3300025297 Bacteria 149476
56 Ga0209050_1018201 3300025298 Bacteria 2743
57 Ga0209256_1000027 3300025299 Bacteria 423283
58 Ga0209256_1001301 3300025299 Bacteria 26880
59 Ga0209256_1001423 3300025299 Bacteria 24892
60 Ga0209256_1005435 3300025299 Bacteria 7340
61 Ga0207426_1000015 3300025302 Bacteria 599316
62 Ga0207426_1000639 3300025302 Bacteria 43792
63 Ga0207426_1003768 3300025302 Bacteria 7893
64 Ga0209051_1001851 3300025303 Bacteria 16666
65 Ga0209051_1021667 3300025303 Bacteria 2726
66 Ga0209051_1026844 3300025303 Bacteria 2310
67 Ga0209257_1000940 3300025304 Bacteria 40225
68 Ga0209257_1002498 3300025304 Bacteria 18159
69 Ga0209281_1000043 3300027111 Bacteria 341543
70 Ga0209371_1000009 3300027312 Bacteria 963030
71 Ga0209371_1000768 3300027312 Bacteria 26665
72 Ga0209282_1005055 3300027666 Bacteria 8059
73 Ga0268266_10004917 3300028379 Bacteria 12663
74 Ga0268266_10034611 3300028379 Bacteria 4296
75 Ga0268256_1000010 3300030500 Bacteria 963034
76 Ga0268256_1000884 3300030500 Bacteria 20763
77 Ga0450900_001883 3300042136 Bacteria 2139
78 Ga0466960_0039415 3300044901 Bacteria 2228
79 Ga0495638_0007736 3300046460 Bacteria 7678
80 Ga0495654_0000070 3300046530 Bacteria 117357
81 Ga0495588_0011768 3300046674 Bacteria 4115
82 Ga0495671_0079058 3300046692 Bacteria 1612
83 Ga0495681_0029913 3300047470 Bacteria 2781
84 Ga0496104_0039162 3300048907 Bacteria 4437
85 Ga0496116_0000478 3300048919 Bacteria 55336
86 Ga0496116_0050707 3300048919 Bacteria 2763
87 Ga0496117_0000002 3300048920 Bacteria 2483758
88 Ga0496117_0084793 3300048920 Bacteria 2065
89 Ga0496118_0000995 3300048921 Bacteria 44160
90 Ga0496118_0034033 3300048921 Bacteria 4168
91 Ga0496118_0067204 3300048921 Bacteria 2612
92 Ga0496119_0011953 3300048922 Bacteria 7113
93 Ga0496119_0019505 3300048922 Bacteria 4991
94 Ga0496120_0000034 3300048923 Bacteria 215228
95 Ga0496121_0000001 3300048924 Bacteria 1830318
96 Ga0496121_0002400 3300048924 Bacteria 28704
97 Ga0496121_0018846 3300048924 Bacteria 6927
98 Ga0496122_0000001 3300048925 Bacteria 1827766
99 Ga0496122_0000018 3300048925 Bacteria 426350
100 Ga0496122_0060294 3300048925 Bacteria 2795
101 Ga0496123_0000001 3300048926 Bacteria 1831497
102 Ga0496123_0000015 3300048926 Bacteria 426088
103 Ga0496124_0024409 3300048927 Bacteria 5497
104 Ga0496124_0044817 3300048927 Bacteria 3793
105 Ga0496124_0085603 3300048927 Bacteria 2582
106 Ga0496125_0000001 3300048928 Bacteria 1766138
107 Ga0496125_0057600 3300048928 Bacteria 3145
108 Ga0496125_0080180 3300048928 Bacteria 2499
109 Ga0496125_0120204 3300048928 Bacteria 1876
110 Ga0496126_0000829 3300048929 Bacteria 55010
111 Ga0496126_0000923 3300048929 Bacteria 50791
112 Ga0496126_0038218 3300048929 Bacteria 4468
113 Ga0501034_0057332 3300049571 Bacteria 3916
114 Ga0501034_0147381 3300049571 Bacteria 2330
115 Ga0501034_0194019 3300049571 Bacteria 1992
116 Ga0501036_0051182 3300049572 Bacteria 3497
117 Ga0501038_0209189 3300049574 Bacteria 1561
118 Ga0501039_0036055 3300049575 Bacteria 3815
119 Ga0501040_0203355 3300049576 Bacteria 1407
120 Ga0501041_0132334 3300049577 Bacteria 1554
121 Ga0501047_0027616 3300049581 Bacteria 5467
122 Ga0501047_0224695 3300049581 Bacteria 1733
123 Ga0501068_0059268 3300049584 Bacteria 2324
124 Ga0501070_0002642 3300049586 Bacteria 15642
125 Ga0501073_0028895 3300049589 Bacteria 3962
126 Ga0501080_0022248 3300049742 Bacteria 5873
127 Ga0501080_0087878 3300049742 Bacteria 2887
128 Ga0501035_0000709 3300049822 Bacteria 36064
129 Ga0501035_0013174 3300049822 Bacteria 7632
130 Ga0501035_0317720 3300049822 Bacteria 1309
131 Ga0501044_0009935 3300049823 Bacteria 10336
132 Ga0501044_0014026 3300049823 Bacteria 8652
133 Ga0501045_0011515 3300049824 Bacteria 6211
134 nmdc:mga03683_3068_c1 3300050489 Bacteria 5308
135 nmdc:mga00v17_69153_c1 3300050491 Bacteria 2184
136 nmdc:mga00v17_812_c1 3300050491 Bacteria 16993
137 nmdc:mga0yw44_26179_c1 3300050492 Bacteria 3329
138 nmdc:mga0yw44_3808_c1 3300050492 Bacteria 6774
139 nmdc:mga06z11_76566_c1 3300050494 Bacteria 1784
140 nmdc:mga07m45_100204_c1 3300050496 Bacteria 1664
141 nmdc:mga0sz30_70_c1 3300050516 Bacteria 39892
142 Ga0500560_009390 3300053107 Bacteria 2402
143 Ga0500618_002061 3300053125 Bacteria 8096
144 Ga0500559_0019639 3300053136 Bacteria 2855
145 Ga0500561_0000726 3300053137 Bacteria 5226
146 Ga0500568_0000691 3300053139 Bacteria 24345
147 Ga0500573_0002265 3300053140 Bacteria 9545
148 Ga0500573_0018889 3300053140 Bacteria 3938
149 Ga0500590_001810 3300053148 Bacteria 9046
150 Ga0500616_0025134 3300053153 Bacteria 3305
151 Ga0500624_001368 3300053157 Bacteria 4086
152 Ga0500634_0003036 3300053161 Bacteria 7340
153 Ga0500634_0035554 3300053161 Bacteria 2714

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006186 Ga0075369_10096151 Ga0075369_100961511 387
2 3300049571 Ga0501034_0057332 Ga0501034_0057332_2458_3720 389
3 3300049574 Ga0501038_0209189 Ga0501038_0209189_197_1459 389
4 3300049575 Ga0501039_0036055 Ga0501039_0036055_2354_3616 389
5 3300049577 Ga0501041_0132334 Ga0501041_0132334_58_1320 389
6 3300049581 Ga0501047_0027616 Ga0501047_0027616_3913_5175 389
7 3300049584 Ga0501068_0059268 Ga0501068_0059268_735_1997 389
8 3300049589 Ga0501073_0028895 Ga0501073_0028895_324_1586 389
9 3300049742 Ga0501080_0087878 Ga0501080_0087878_1315_2577 389
10 3300049822 Ga0501035_0013174 Ga0501035_0013174_3913_5175 389
11 3300049823 Ga0501044_0009935 Ga0501044_0009935_3913_5175 389
12 3300049824 Ga0501045_0011515 Ga0501045_0011515_639_1901 389
13 3300049822 Ga0501035_0317720 Ga0501035_0317720_70_1260 393
14 3300003781 Ga0055536_1013036 Ga0055536_10130363 395
15 3300025292 Ga0209676_1003075 Ga0209676_10030752 395
16 3300025297 Ga0209758_1000170 Ga0209758_1000170128 395
17 3300025298 Ga0209050_1018201 Ga0209050_10182014 395
18 3300025303 Ga0209051_1001851 Ga0209051_100185113 395
19 3300025304 Ga0209257_1000940 Ga0209257_100094012 395
20 3300049581 Ga0501047_0224695 Ga0501047_0224695_121_1353 395
21 3300053139 Ga0500568_0000691 Ga0500568_0000691_4254_5471 395
22 iso_pu_bacteria 2513237087 2513592956 395
23 iso_pu_bacteria 2510917026 2511172122 397
24 iso_pu_bacteria 2537561587 2537873396 397
25 iso_pu_bacteria 2554235003 2554246346 397
26 iso_pu_bacteria 2558860242 2559293568 397
27 iso_pu_bacteria 2585427634 2586003151 397
28 iso_pu_bacteria 2600255279 2601609410 397
29 iso_pu_bacteria 2600255308 2601746185 397
30 iso_pu_bacteria 2643221568 2643857500 397
31 iso_pu_bacteria 2643221582 2643920730 397
32 iso_pu_bacteria 2643221693 2644519465 397
33 iso_pu_bacteria 2808606387 2808986661 397
34 iso_pu_bacteria 2818991439 2819556733 397
35 iso_pu_bacteria 2818991461 2819685943 397
36 iso_pu_bacteria 2838675328 2838677468 397
37 iso_pu_bacteria 2838680041 2838680177 397
38 iso_pu_bacteria 2838694306 2838695792 397
39 iso_pu_bacteria 2838707686 2838709167 397
40 iso_pu_bacteria 2838714209 2838716356 397
41 iso_pu_bacteria 2838719591 2838719844 397
42 iso_pu_bacteria 2838724970 2838727108 397
43 iso_pu_bacteria 2841846520 2841846774 397
44 iso_pu_bacteria 2841859092 2841860697 397
45 iso_pu_bacteria 2842077413 2842079597 397
46 iso_pu_bacteria 2842118031 2842120215 397
47 iso_pu_bacteria 2842124991 2842127197 397
48 iso_pu_bacteria 2842130223 2842132361 397
49 iso_pu_bacteria 2842152218 2842152470 397
50 iso_pu_bacteria 2842170452 2842172601 397
51 iso_pu_bacteria 2842175837 2842176089 397
52 iso_pu_bacteria 2842187318 2842189463 397
53 iso_pu_bacteria 2842211629 2842213777 397
54 iso_pu_bacteria 2842224351 2842224605 397
55 iso_pu_bacteria 2842237096 2842238578 397
56 iso_pu_bacteria 2842291075 2842293258 397
57 iso_pu_bacteria 2842370503 2842370639 397
58 iso_pu_bacteria 2842377471 2842379655 397
59 iso_pu_bacteria 2842384541 2842386726 397
60 iso_pu_bacteria 2842515876 2842517482 397
61 iso_pu_bacteria 2899792073 2899794512 397
62 iso_pu_bacteria 2899845264 2899845856 397
63 iso_pu_bacteria 2919114240 2919116561 397
64 iso_pu_bacteria 2919166419 2919166518 397
65 iso_pu_bacteria 2919171160 2919172348 397
66 iso_pu_bacteria 2926754445 2926754582 397
67 iso_pu_bacteria 2926760298 2926761754 397
68 iso_pu_bacteria 2929138655 2929142265 397
69 iso_pu_bacteria 2933011516 2933015293 397
70 iso_pu_bacteria 2933594066 2933594319 397
71 iso_pu_bacteria 2935894831 2935896312 397
72 iso_pu_bacteria 2978969890 2978972908 397
73 iso_pu_bacteria 2979089926 2979092982 397
74 iso_pu_bacteria 2979095461 2979099630 397
75 iso_pu_bacteria 2979100975 2979104951 397
76 iso_pu_bacteria 2984509177 2984513246 397
77 iso_pu_bacteria 2984518228 2984520383 397
78 iso_pu_bacteria 2984537506 2984539681 397
79 iso_pu_bacteria 2984587000 2984591160 397
80 iso_pu_bacteria 2984601300 2984601906 397
81 iso_pu_bacteria 650716007 650738806 397
82 iso_pu_bacteria 8005695170 8005699697 397
83 iso_pu_bacteria 2510917028 2511185769 398
84 iso_pu_bacteria 2513237088 2513595372 398
85 iso_pu_bacteria 2513237138 2513866525 398
86 iso_pu_bacteria 2534681796 2535514724 398
87 iso_pu_bacteria 2558860983 2561466657 398
88 iso_pu_bacteria 2582581294 2585201130 398
89 iso_pu_bacteria 2582581867 2585398938 398
90 iso_pu_bacteria 2585427590 2585818941 398
91 iso_pu_bacteria 2599185236 2599718922 398
92 iso_pu_bacteria 2599185352 2600194963 398
93 iso_pu_bacteria 2617270742 2617380549 398
94 iso_pu_bacteria 2643221551 2643776663 398
95 iso_pu_bacteria 2643221555 2643795111 398
96 iso_pu_bacteria 2643221557 2643805936 398
97 iso_pu_bacteria 2643221610 2644066112 398
98 iso_pu_bacteria 2643221623 2644133886 398
99 iso_pu_bacteria 2643221643 2644237527 398
100 iso_pu_bacteria 2643221668 2644377196 398
101 iso_pu_bacteria 2643221675 2644417443 398
102 iso_pu_bacteria 2643221680 2644450839 398
103 iso_pu_bacteria 2643221723 2644671621 398
104 iso_pu_bacteria 2643221726 2644692738 398
105 iso_pu_bacteria 2738541293 2738800938 398
106 iso_pu_bacteria 2791355260 2793322354 398
107 iso_pu_bacteria 2837678835 2837683215 398
108 iso_pu_bacteria 2842285085 2842286429 398
109 iso_pu_bacteria 2842341865 2842344492 398
110 iso_pu_bacteria 2842402390 2842404018 398
111 iso_pu_bacteria 2842409023 2842410279 398
112 iso_pu_bacteria 2842415677 2842416927 398
113 iso_pu_bacteria 2842482326 2842486059 398
114 iso_pu_bacteria 2854896431 2854900676 398
115 iso_pu_bacteria 2854916844 2854919628 398
116 iso_pu_bacteria 2920822456 2920822974 398
117 iso_pu_bacteria 2923556063 2923556334 398
118 iso_pu_bacteria 2933016740 2933023504 398
119 iso_pu_bacteria 2996887358 2996888138 398
120 iso_pu_bacteria 3005452660 3005456521 398
121 iso_pu_bacteria 8005258706 8005261310 398
122 iso_pu_bacteria 8005321885 8005322665 398
123 iso_pu_bacteria 8005542996 8005543394 398
124 iso_pu_bacteria 8046767195 8046769595 398
125 3300049571 Ga0501034_0147381 Ga0501034_0147381_41_1249 399
126 iso_pu_bacteria 2534681786 2535487000 399
127 3300048922 Ga0496119_0011953 Ga0496119_0011953_2675_4087 400
128 iso_pu_bacteria 2751185800 2753360088 400
129 iso_pu_bacteria 2758568016 2758642410 400
130 3300003354 JGI25160J50197_1001461 JGI25160J50197_100146113 401
131 3300003790 Ga0055528_1000564 Ga0055528_100056417 401
132 3300003856 Ga0058692_1002583 Ga0058692_10025835 401
133 3300004625 Ga0055543_1000359 Ga0055543_10003595 401
134 3300005262 Ga0065165_1011316 Ga0065165_10113162 401
135 3300006051 Ga0075364_10007629 Ga0075364_100076296 401
136 3300006178 Ga0075367_10091324 Ga0075367_100913241 401
137 3300006186 Ga0075369_10004107 Ga0075369_100041072 401
138 3300006195 Ga0075366_10065789 Ga0075366_100657892 401
139 3300006948 Ga0099826_10013685 Ga0099826_100136856 401
140 3300006948 Ga0099826_10025317 Ga0099826_100253174 401
141 3300013100 Ga0157373_10005437 Ga0157373_100054372 401
142 3300013102 Ga0157371_10000004 Ga0157371_10000004247 401
143 3300013102 Ga0157371_10015366 Ga0157371_100153667 401
144 3300013104 Ga0157370_10000165 Ga0157370_1000016538 401
145 3300025273 Ga0209673_1000135 Ga0209673_1000135127 401
146 3300025294 Ga0209025_1000060 Ga0209025_1000060109 401
147 3300025295 Ga0209564_1000138 Ga0209564_1000138109 401
148 3300025299 Ga0209256_1001423 Ga0209256_100142310 401
149 3300025302 Ga0207426_1000639 Ga0207426_100063912 401
150 3300027312 Ga0209371_1000009 Ga0209371_1000009749 401
151 3300027312 Ga0209371_1000768 Ga0209371_100076810 401
152 3300027666 Ga0209282_1005055 Ga0209282_10050552 401
153 3300028379 Ga0268266_10004917 Ga0268266_100049177 401
154 3300030500 Ga0268256_1000010 Ga0268256_1000010748 401
155 3300030500 Ga0268256_1000884 Ga0268256_100088410 401
156 3300042136 Ga0450900_001883 Ga0450900_001883_477_1682 401
157 3300046530 Ga0495654_0000070 Ga0495654_0000070_36048_37253 401
158 3300046674 Ga0495588_0011768 Ga0495588_0011768_548_1753 401
159 3300046692 Ga0495671_0079058 Ga0495671_0079058_81_1337 401
160 3300047470 Ga0495681_0029913 Ga0495681_0029913_1098_2354 401
161 3300048919 Ga0496116_0000478 Ga0496116_0000478_31022_32227 401
162 3300048920 Ga0496117_0000002 Ga0496117_0000002_2213985_2215190 401
163 3300048920 Ga0496117_0084793 Ga0496117_0084793_303_1535 401
164 3300048921 Ga0496118_0000995 Ga0496118_0000995_16179_17384 401
165 3300048921 Ga0496118_0034033 Ga0496118_0034033_2153_3358 401
166 3300048921 Ga0496118_0067204 Ga0496118_0067204_625_1830 401
167 3300048922 Ga0496119_0019505 Ga0496119_0019505_395_1600 401
168 3300048923 Ga0496120_0000034 Ga0496120_0000034_147292_148497 401
169 3300048924 Ga0496121_0000001 Ga0496121_0000001_80620_81825 401
170 3300048925 Ga0496122_0000001 Ga0496122_0000001_1584781_1585986 401
171 3300048926 Ga0496123_0000001 Ga0496123_0000001_1588512_1589717 401
172 3300048927 Ga0496124_0044817 Ga0496124_0044817_1113_2318 401
173 3300048927 Ga0496124_0085603 Ga0496124_0085603_383_1588 401
174 3300048928 Ga0496125_0000001 Ga0496125_0000001_194074_195279 401
175 3300048928 Ga0496125_0057600 Ga0496125_0057600_779_1984 401
176 3300048928 Ga0496125_0120204 Ga0496125_0120204_188_1393 401
177 3300048929 Ga0496126_0000829 Ga0496126_0000829_22803_24008 401
178 3300048929 Ga0496126_0000923 Ga0496126_0000923_5604_6809 401
179 3300048929 Ga0496126_0038218 Ga0496126_0038218_2786_3991 401
180 3300050489 nmdc:mga03683_3068_c1 nmdc:mga03683_3068_c1_86_1291 401
181 3300050491 nmdc:mga00v17_69153_c1 nmdc:mga00v17_69153_c1_792_2048 401
182 3300050491 nmdc:mga00v17_812_c1 nmdc:mga00v17_812_c1_10033_11238 401
183 3300050492 nmdc:mga0yw44_26179_c1 nmdc:mga0yw44_26179_c1_2095_3300 401
184 3300050494 nmdc:mga06z11_76566_c1 nmdc:mga06z11_76566_c1_17_1222 401
185 3300050496 nmdc:mga07m45_100204_c1 nmdc:mga07m45_100204_c1_250_1455 401
186 3300050516 nmdc:mga0sz30_70_c1 nmdc:mga0sz30_70_c1_15204_16409 401
187 3300053107 Ga0500560_009390 Ga0500560_009390_677_1882 401
188 3300053137 Ga0500561_0000726 Ga0500561_0000726_1932_3137 401
189 3300053140 Ga0500573_0002265 Ga0500573_0002265_5132_6337 401
190 3300053140 Ga0500573_0018889 Ga0500573_0018889_1713_2918 401
191 3300053157 Ga0500624_001368 Ga0500624_001368_1910_3115 401
192 3300053161 Ga0500634_0035554 Ga0500634_0035554_326_1531 401
193 iso_pu_bacteria 2599185210 2599604452 401
194 iso_pu_bacteria 2600254933 2600376641 401
195 iso_pu_bacteria 2933006813 2933007117 401
196 iso_pu_bacteria 2989349275 2989351785 401
197 3300002773 JGI25152J39213_1004580 JGI25152J39213_10045804 402
198 3300003214 JGI25165J46597_1000607 JGI25165J46597_10006077 402
199 3300003354 JGI25160J50197_1012351 JGI25160J50197_10123512 402
200 3300003374 JGI25161J50226_1000426 JGI25161J50226_10004266 402
201 3300003771 Ga0055526_1000639 Ga0055526_100063919 402
202 3300003771 Ga0055526_1012325 Ga0055526_10123253 402
203 3300003775 Ga0055524_1003540 Ga0055524_10035404 402
204 3300003775 Ga0055524_1019944 Ga0055524_10199442 402
205 3300003790 Ga0055528_1008600 Ga0055528_10086003 402
206 3300004625 Ga0055543_1000223 Ga0055543_100022332 402
207 3300005262 Ga0065165_1000025 Ga0065165_1000025149 402
208 3300005262 Ga0065165_1001919 Ga0065165_10019191 402
209 3300005548 Ga0070665_100020849 Ga0070665_1000208494 402
210 3300006038 Ga0075365_10000703 Ga0075365_100007034 402
211 3300006038 Ga0075365_10021772 Ga0075365_100217721 402
212 3300006178 Ga0075367_10006589 Ga0075367_100065892 402
213 3300006186 Ga0075369_10009433 Ga0075369_100094332 402
214 3300006946 Ga0079104_1000033 Ga0079104_100003380 402
215 3300009011 Ga0105251_10009606 Ga0105251_100096063 402
216 3300009177 Ga0105248_10048959 Ga0105248_100489593 402
217 3300009553 Ga0105249_10303617 Ga0105249_103036172 402
218 3300013249 Ga0171463_1001 Ga0171463_10011106 402
219 3300015690 Ga0183363_1135 Ga0183363_11354 402
220 3300025208 Ga0209436_101064 Ga0209436_1010642 402
221 3300025233 Ga0209437_100056 Ga0209437_100056272 402
222 3300025258 Ga0209129_1001949 Ga0209129_10019499 402
223 3300025261 Ga0209233_1000071 Ga0209233_1000071272 402
224 3300025284 Ga0209130_1000005 Ga0209130_1000005299 402
225 3300025292 Ga0209676_1012393 Ga0209676_10123932 402
226 3300025294 Ga0209025_1000105 Ga0209025_1000105117 402
227 3300025294 Ga0209025_1024923 Ga0209025_10249232 402
228 3300025295 Ga0209564_1000217 Ga0209564_100021767 402
229 3300025295 Ga0209564_1010364 Ga0209564_10103644 402
230 3300025299 Ga0209256_1000027 Ga0209256_1000027111 402
231 3300025299 Ga0209256_1001301 Ga0209256_100130119 402
232 3300025299 Ga0209256_1005435 Ga0209256_10054353 402
233 3300025302 Ga0207426_1000015 Ga0207426_1000015300 402
234 3300025302 Ga0207426_1003768 Ga0207426_10037682 402
235 3300025303 Ga0209051_1021667 Ga0209051_10216673 402
236 3300025303 Ga0209051_1026844 Ga0209051_10268442 402
237 3300025304 Ga0209257_1002498 Ga0209257_10024988 402
238 3300027111 Ga0209281_1000043 Ga0209281_1000043216 402
239 3300028379 Ga0268266_10034611 Ga0268266_100346113 402
240 3300044901 Ga0466960_0039415 Ga0466960_0039415_174_1559 402
241 3300046460 Ga0495638_0007736 Ga0495638_0007736_5671_6888 402
242 3300048907 Ga0496104_0039162 Ga0496104_0039162_1122_2342 402
243 3300048919 Ga0496116_0050707 Ga0496116_0050707_421_1641 402
244 3300048924 Ga0496121_0002400 Ga0496121_0002400_7393_8601 402
245 3300048924 Ga0496121_0018846 Ga0496121_0018846_3344_4552 402
246 3300048925 Ga0496122_0000018 Ga0496122_0000018_176200_177423 402
247 3300048925 Ga0496122_0060294 Ga0496122_0060294_1113_2333 402
248 3300048926 Ga0496123_0000015 Ga0496123_0000015_176200_177423 402
249 3300048927 Ga0496124_0024409 Ga0496124_0024409_487_1710 402
250 3300048928 Ga0496125_0080180 Ga0496125_0080180_335_1555 402
251 3300049571 Ga0501034_0194019 Ga0501034_0194019_249_1466 402
252 3300049572 Ga0501036_0051182 Ga0501036_0051182_910_2121 402
253 3300049576 Ga0501040_0203355 Ga0501040_0203355_67_1287 402
254 3300049586 Ga0501070_0002642 Ga0501070_0002642_8327_9544 402
255 3300049742 Ga0501080_0022248 Ga0501080_0022248_2406_3623 402
256 3300049822 Ga0501035_0000709 Ga0501035_0000709_17163_18380 402
257 3300049823 Ga0501044_0014026 Ga0501044_0014026_1649_2866 402
258 3300050492 nmdc:mga0yw44_3808_c1 nmdc:mga0yw44_3808_c1_5499_6710 402
259 3300053125 Ga0500618_002061 Ga0500618_002061_872_2083 402
260 3300053136 Ga0500559_0019639 Ga0500559_0019639_1546_2769 402
261 3300053148 Ga0500590_001810 Ga0500590_001810_3827_5038 402
262 3300053153 Ga0500616_0025134 Ga0500616_0025134_1267_2484 402
263 3300053161 Ga0500634_0003036 Ga0500634_0003036_4306_5541 402
264 iso_pu_bacteria 2757320392 2757571477 402
265 iso_pu_bacteria 2775506904 2776283728 402
266 iso_pu_bacteria 2821123053 2821123350 402
267 iso_pu_bacteria 2838736955 2838739627 402
268 iso_pu_bacteria 2839993093 2839993660 402
269 iso_pu_bacteria 2840764183 2840766714 402
270 iso_pu_bacteria 2841840854 2841844249 402
271 iso_pu_bacteria 2842140634 2842143970 402
272 iso_pu_bacteria 2854911287 2854912762 402
273 iso_pu_bacteria 2857531043 2857533699 402
274 iso_pu_bacteria 2894652903 2894653361 402
275 iso_pu_bacteria 2915650412 2915653475 402

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04127

DFP

DNA / pantothenate metabolism flavoprotein

181

370

0.93

PF02441

Flavoprotein

Flavoprotein

6

174

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5h75-assembly1.cif.gz_C crystal structure of the mrsd-protein a fusion protein 0.9189 6 176
5h75-assembly1.cif.gz_A crystal structure of the mrsd-protein a fusion protein 0.9124 6 176
1p3y-assembly1.cif.gz_1 mrsd from bacillus sp. hil-y85/54728 0.9103 6 179
5h75-assembly1.cif.gz_D crystal structure of the mrsd-protein a fusion protein 0.9 2 176
6jls-assembly1.cif.gz_A crystal structure of fmn-dependent cysteine decarboxylases tvaf from thioviridamide biosynthesis 0.8976 4 179
ID Description Score Start End Superfamily
af_P0ABQ0_1_184_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9714 1 184 3.40.50.1950
af_P9WNZ1_7_185_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9704 6 183 3.40.50.1950
af_Q2G268_1_185_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.968 6 179 3.40.50.1950
af_P0ABQ0_1_184_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9611 1 184 3.40.50.1950
af_P9WNZ1_7_185_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.944 6 183 3.40.50.1950
ID Description Score Start End GO Terms
AF-A0A7X6ENU6-F1-model_v4 deleted 0.9981 93 179
AF-A0A3D2EL01-F1-model_v4 Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC 4.1.1.36, EC 6.3.2.5) 0.9894 1 66 GO:0004632
GO:0004633
AF-M0FI22-F1-model_v4 Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 0.9881 3 63 GO:0016874
AF-A0A2W5FXM7-F1-model_v4 deleted 0.9871 2 124
AF-A0A527HBM9-F1-model_v4 Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC 4.1.1.36, EC 6.3.2.5) 0.9864 1 180 GO:0004632
GO:0004633
GO:0010181
GO:0015937
GO:0071513

Feature Viewer

pLDDT pTM Quality
86.77 0.71 High
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Predicted Structure (AlphaFold2)

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