F380086

General Info

Members Datasets Scaffolds Average Seq Length
274 214 190 263

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2919726948|2919729511
Length 299
Sequence KTAELLSMAQMIWQKQEPFIINGLANERCDEMTIKKAFTIAGSDSGGGAGIQADLKTFQELGVFGMSAITAITAQNTLGVHGVYPLSNEALESQIDAVAEDLLPDAVKTGMLWSADMIKIVAEKTVQYDMKLIVDPVMIAKGGASLLNEDAVTALKTHLLPVSYAVTPNLPEAEVLTGMRIQTKEDRYLAAERLYELGTKHVVIKGGHGPSGGMITDLLYDGKGFIEVTNEHIDTPHTHGTGCTFAAALTAEIAKGSSMREAFDTAETFVHEAIKFPLNIGAGHGPTNHFAYQQNRLKR

Samples

Sample ID Description Type Environment
1 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
2 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
3 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
4 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
5 2554235283 Bacillus safensis VK Isolate Rhizosphere
6 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
7 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
8 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
9 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
10 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
11 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
12 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
13 2643221735 Bacillus sp. Root920 Isolate Unclassified
14 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
15 2671180694 Paenibacillus sp. A3 Isolate Unclassified
16 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
17 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
18 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
19 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
20 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
21 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
22 2738543010 Bacillus sp. YR335 Isolate Unclassified
23 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
24 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
25 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
26 2811994870 Bacillus sp. JB4 Isolate Unclassified
27 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
28 2818991441 Niallia circulans 3243 Isolate Rhizosphere
29 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
30 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
31 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
32 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
33 2860837431 Bacillus sp. WR11 Isolate Unclassified
34 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
35 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
36 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
37 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
38 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
39 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
40 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
41 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
42 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
43 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
44 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
45 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
46 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
47 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
48 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
49 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
50 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
51 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
52 2919726948 Bacillus pumilus 4489 Isolate Unclassified
53 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
54 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
55 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
56 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
57 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
58 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
59 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
60 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
61 2969141011 Bacillus velezensis MH25 Isolate Unclassified
62 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
63 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
64 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
65 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
66 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
67 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
68 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
69 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
70 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
71 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
72 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
73 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
74 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
75 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
76 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
77 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
78 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
79 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
80 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
81 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
82 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
83 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
84 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
85 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
86 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
87 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
88 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
89 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
90 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
91 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
92 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
93 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
94 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
95 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
96 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
97 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
98 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
99 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
100 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
101 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
102 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
103 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
104 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
105 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
106 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
107 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
108 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
109 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
110 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
111 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
112 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
113 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
114 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
115 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
116 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
117 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
118 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
119 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
120 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
121 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
122 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
123 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
124 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
125 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
126 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
130 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
132 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
133 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
145 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
146 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
147 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
148 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
149 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
150 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
151 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
152 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
153 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
154 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
155 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
156 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
157 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
158 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
159 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
160 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
161 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
162 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
163 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
164 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
165 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
166 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
167 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
168 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
169 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
170 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
171 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
172 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
173 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
174 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
175 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
176 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
177 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
178 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
179 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
180 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
181 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
182 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
183 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
184 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
185 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
186 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
187 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
188 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
189 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
190 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
191 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
196 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
201 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
202 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
204 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
205 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
206 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
207 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
208 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
209 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
210 8022653035 Bacillus sp. Rc4 Isolate Unclassified
211 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
212 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
213 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
214 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 68.25
Metatranscriptomes 1.09
Isolates 30.66

Biome Distribution

Category Percentage (%)
Aerial Root 0.73
Bulb 0
Endosphere 5.84
Nodule 0
Rhizoplane 2.55
Rhizosphere 75.55
Stem 0
Stem Tuber 0
Unclassified 15.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000009 3300003187 Bacteria 296412
2 JGI25151J46595_10003622 3300003187 Bacteria 8447
3 JGI25151J46595_10011767 3300003187 Bacteria 4008
4 JGI25406J46586_10021639 3300003203 Unclassified 2576
5 Ga0006562J51391_1000090 3300003578 Bacteria 2010
6 Ga0006562J51391_1000094 3300003578 Bacteria 1070
7 Ga0055538_1000443 3300003751 Bacteria 15718
8 Ga0058860_11405464 3300004801 Bacteria 1742
9 Ga0065712_10075996 3300005290 Bacteria 3750
10 Ga0070683_100132261 3300005329 Bacteria 2361
11 Ga0070690_100241395 3300005330 Bacteria 1274
12 Ga0070660_100281766 3300005339 Bacteria 1360
13 Ga0070689_100271824 3300005340 Bacteria 1403
14 Ga0070688_100250364 3300005365 Bacteria 1261
15 Ga0070659_100206928 3300005366 Bacteria 1616
16 Ga0070714_100003255 3300005435 Bacteria 12086
17 Ga0070713_100450542 3300005436 Bacteria 1209
18 Ga0070708_100000181 3300005445 Bacteria 45372
19 Ga0070708_100002660 3300005445 Bacteria 13834
20 Ga0070708_100016413 3300005445 Bacteria 6144
21 Ga0070708_100047825 3300005445 Bacteria 3779
22 Ga0070708_100078329 3300005445 Bacteria 2987
23 Ga0070706_100000005 3300005467 Bacteria 264211
24 Ga0070706_100000021 3300005467 Bacteria 162774
25 Ga0070706_100023413 3300005467 Bacteria 5687
26 Ga0070706_100576258 3300005467 Bacteria 1046
27 Ga0070707_100000090 3300005468 Bacteria 82022
28 Ga0070707_100010957 3300005468 Bacteria 8445
29 Ga0070707_100017672 3300005468 Bacteria 6709
30 Ga0070707_100019060 3300005468 Bacteria 6461
31 Ga0070707_100038378 3300005468 Bacteria 4575
32 Ga0070707_100048694 3300005468 Bacteria 4060
33 Ga0070707_100063479 3300005468 Bacteria 3544
34 Ga0070707_100119163 3300005468 Bacteria 2562
35 Ga0070707_100172674 3300005468 Bacteria 2106
36 Ga0070698_100025501 3300005471 Bacteria 6162
37 Ga0070698_100030489 3300005471 Bacteria 5590
38 Ga0070698_100057784 3300005471 Bacteria 3924
39 Ga0070698_100070722 3300005471 Bacteria 3501
40 Ga0070698_100517633 3300005471 Bacteria 1131
41 Ga0070699_100000168 3300005518 Bacteria 63225
42 Ga0070699_100001316 3300005518 Bacteria 22899
43 Ga0070699_100025810 3300005518 Bacteria 5064
44 Ga0070699_100036338 3300005518 Bacteria 4261
45 Ga0070699_100331224 3300005518 Bacteria 1369
46 Ga0070684_100421452 3300005535 Bacteria 1232
47 Ga0070697_100012605 3300005536 Bacteria 6621
48 Ga0070697_100034245 3300005536 Bacteria 4094
49 Ga0070695_100141840 3300005545 Bacteria 1667
50 Ga0070665_100216871 3300005548 Bacteria 1914
51 Ga0070704_100001295 3300005549 Bacteria 13220
52 Ga0068852_100249404 3300005616 Bacteria 1700
53 Ga0068859_100077416 3300005617 Bacteria 3367
54 Ga0068864_100306760 3300005618 Bacteria 1487
55 Ga0081539_10003272 3300005985 Bacteria 20325
56 Ga0070717_10000025 3300006028 Bacteria 152153
57 Ga0070717_10001031 3300006028 Bacteria 18661
58 Ga0070717_10004185 3300006028 Bacteria 10399
59 Ga0070717_10025224 3300006028 Bacteria 4726
60 Ga0075365_10029398 3300006038 Bacteria 3513
61 Ga0070716_100073853 3300006173 Bacteria 2013
62 Ga0075428_100423376 3300006844 Bacteria 1427
63 Ga0075433_10024152 3300006852 Bacteria 5126
64 Ga0075434_100037533 3300006871 Bacteria 4797
65 Ga0075434_100291739 3300006871 Bacteria 1651
66 Ga0075436_100043524 3300006914 Unclassified 3096
67 Ga0075436_100068020 3300006914 Bacteria 2461
68 Ga0075436_100191113 3300006914 Bacteria 1448
69 Ga0097620_100077416 3300006931 Bacteria 3367
70 Ga0099794_10078033 3300007265 Bacteria 1630
71 Ga0099794_10201656 3300007265 Bacteria 1019
72 Ga0105244_10043073 3300009036 Bacteria 2331
73 Ga0105240_10867519 3300009093 Unclassified 973
74 Ga0111539_10037364 3300009094 Bacteria 5865
75 Ga0111539_10621470 3300009094 Bacteria 1258
76 Ga0114129_10827928 3300009147 Bacteria 1178
77 Ga0114129_11136387 3300009147 Bacteria 976
78 Ga0105249_10051280 3300009553 Bacteria 3763
79 Ga0157370_10182067 3300013104 Bacteria 1952
80 Ga0157375_10382547 3300013308 Bacteria 1574
81 Ga0163163_10851969 3300014325 Bacteria 975
82 Ga0157380_10122231 3300014326 Bacteria 2207
83 Ga0213875_10022028 3300021388 Bacteria 3049
84 Ga0209784_100114 3300025224 Bacteria 89590
85 Ga0209566_102001 3300025225 Bacteria 4319
86 Ga0209147_103817 3300025229 Bacteria 2744
87 Ga0209437_101123 3300025233 Bacteria 8229
88 Ga0209676_1001089 3300025292 Bacteria 30518
89 Ga0209676_1028742 3300025292 Bacteria 1726
90 Ga0209025_1000001 3300025294 Bacteria 1888151
91 Ga0209025_1002223 3300025294 Bacteria 21381
92 Ga0209025_1006976 3300025294 Bacteria 8579
93 Ga0209758_1002194 3300025297 Bacteria 20448
94 Ga0207684_10000095 3300025910 Bacteria 165210
95 Ga0207684_10000163 3300025910 Bacteria 113933
96 Ga0207684_10000194 3300025910 Bacteria 95812
97 Ga0207684_10087866 3300025910 Bacteria 2648
98 Ga0207684_10113366 3300025910 Bacteria 2321
99 Ga0207684_10313123 3300025910 Bacteria 1353
100 Ga0207657_10262164 3300025919 Bacteria 1375
101 Ga0207646_10000027 3300025922 Bacteria 235383
102 Ga0207646_10000053 3300025922 Bacteria 160799
103 Ga0207646_10000090 3300025922 Bacteria 121922
104 Ga0207646_10000493 3300025922 Bacteria 52838
105 Ga0207646_10016962 3300025922 Bacteria 6824
106 Ga0207646_10031882 3300025922 Bacteria 4770
107 Ga0207646_10035867 3300025922 Bacteria 4477
108 Ga0207646_10044388 3300025922 Bacteria 3990
109 Ga0207646_10174896 3300025922 Bacteria 1939
110 Ga0207646_10488271 3300025922 Bacteria 1110
111 Ga0207664_10689605 3300025929 Bacteria 918
112 Ga0207690_10089306 3300025932 Bacteria 2173
113 Ga0207661_10059988 3300025944 Bacteria 3067
114 Ga0207676_10461738 3300026095 Bacteria 1199
115 Ga0207698_10227683 3300026142 Bacteria 1690
116 Ga0209588_1000902 3300027671 Bacteria 7550
117 Ga0268266_10176005 3300028379 Bacteria 1945
118 Ga0268265_10031274 3300028380 Bacteria 3843
119 Ga0265326_10007692 3300028558 Bacteria 3289
120 Ga0265318_10011668 3300028577 Bacteria 3773
121 Ga0265338_10013553 3300028800 Bacteria 9189
122 Ga0265325_10110052 3300031241 Bacteria 1340
123 Ga0265329_10006472 3300031242 Bacteria 4641
124 Ga0265340_10063370 3300031247 Bacteria 1764
125 Ga0265339_10142210 3300031249 Bacteria 1220
126 Ga0307408_100033279 3300031548 Bacteria 3601
127 Ga0265342_10006368 3300031712 Bacteria 8800
128 Ga0316576_10105747 3300031727 Unclassified 2107
129 Ga0316578_10033984 3300031728 Unclassified 2925
130 Ga0307407_10014361 3300031903 Bacteria 3876
131 Ga0307416_100023618 3300032002 Bacteria 4466
132 Ga0307414_10216631 3300032004 Bacteria 1569
133 Ga0307411_10048909 3300032005 Bacteria 2744
134 Ga0307415_100144906 3300032126 Bacteria 1819
135 Ga0307415_100207883 3300032126 Bacteria 1559
136 Ga0373947_0045141 3300035725 Bacteria 2637
137 Ga0373937_0077539 3300036401 Bacteria 3071
138 Ga0316584_0434801 3300036712 Bacteria 930
139 Ga0373925_0653893 3300037068 Bacteria 866
140 Ga0436365_0470528 3300039437 Bacteria 2380
141 Ga0436363_0158545 3300039450 Bacteria 2461
142 Ga0439436_0006999 3300041404 Bacteria 3470
143 Ga0439449_0001488 3300042007 Bacteria 9178
144 Ga0439462_0003264 3300042015 Bacteria 3877
145 Ga0466969_0039096 3300044656 Bacteria 2384
146 Ga0453683_0001812 3300044673 Bacteria 17636
147 Ga0466966_0010508 3300044684 Bacteria 6151
148 Ga0466961_0042610 3300044693 Bacteria 2909
149 Ga0466968_0011351 3300044735 Bacteria 3468
150 Ga0466970_0084741 3300044765 Bacteria 1716
151 Ga0466957_0030030 3300044842 Bacteria 3244
152 Ga0466959_0001397 3300045049 Bacteria 14776
153 Ga0466959_0008629 3300045049 Bacteria 7213
154 Ga0466958_0036988 3300045836 Bacteria 2923
155 Ga0495638_0025592 3300046460 Bacteria 3833
156 Ga0495585_0017733 3300046492 Bacteria 4111
157 Ga0495635_0267053 3300046663 Bacteria 1151
158 Ga0495626_0064000 3300048091 Bacteria 1667
159 Ga0496101_0420716 3300048904 Bacteria 1053
160 Ga0496102_0386729 3300048905 Bacteria 1316
161 Ga0496109_0393489 3300048912 Bacteria 1309
162 Ga0496110_0002134 3300048913 Bacteria 14774
163 Ga0496112_0093262 3300048915 Bacteria 2981
164 Ga0496112_0310112 3300048915 Bacteria 1523
165 Ga0496113_0301297 3300048916 Bacteria 1283
166 Ga0496116_0050526 3300048919 Bacteria 2770
167 Ga0496121_0084996 3300048924 Bacteria 2492
168 Ga0496125_0017349 3300048928 Bacteria 6870
169 Ga0496125_0238054 3300048928 Bacteria 1158
170 Ga0501031_0014859 3300049568 Bacteria 5059
171 Ga0501032_0007168 3300049569 Bacteria 8161
172 Ga0501033_0200716 3300049570 Bacteria 1424
173 Ga0501034_0007617 3300049571 Bacteria 11519
174 Ga0501036_0150046 3300049572 Bacteria 1966
175 Ga0501038_0144485 3300049574 Bacteria 1943
176 Ga0501043_0026584 3300049579 Bacteria 4540
177 Ga0501046_0226967 3300049580 Bacteria 1381
178 Ga0501047_0132836 3300049581 Bacteria 2369
179 Ga0501047_0205785 3300049581 Bacteria 1827
180 Ga0501257_005205 3300049686 Bacteria 2861
181 Ga0501080_0035126 3300049742 Bacteria 4680
182 Ga0501035_0162335 3300049822 Bacteria 1933
183 Ga0501045_0073027 3300049824 Bacteria 2526
184 nmdc:mga05p37_173828_c1 3300050507 Bacteria 2625
185 nmdc:mga05p37_687469_c1 3300050507 Bacteria 1139
186 nmdc:mga08y16_123924_c1 3300050511 Bacteria 2689
187 nmdc:mga0n895_11441_c1 3300050512 Bacteria 7917
188 nmdc:mga0n895_389459_c1 3300050512 Bacteria 1410
189 nmdc:mga08x19_160846_c1 3300050514 Bacteria 1525
190 nmdc:mga0sz30_141225_c1 3300050516 Bacteria 1063

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044842 Ga0466957_0030030 Ga0466957_0030030_2546_3214 207
2 3300025297 Ga0209758_1002194 Ga0209758_10021943 211
3 3300025929 Ga0207664_10689605 Ga0207664_106896051 216
4 3300039450 Ga0436363_0158545 Ga0436363_0158545_79_783 220
5 3300006871 Ga0075434_100291739 Ga0075434_1002917392 225
6 3300009147 Ga0114129_10827928 Ga0114129_108279282 225
7 3300050507 nmdc:mga05p37_687469_c1 nmdc:mga05p37_687469_c1_252_1043 225
8 3300050512 nmdc:mga0n895_389459_c1 nmdc:mga0n895_389459_c1_67_858 225
9 3300028800 Ga0265338_10013553 Ga0265338_100135534 231
10 3300005468 Ga0070707_100038378 Ga0070707_1000383782 233
11 3300025922 Ga0207646_10488271 Ga0207646_104882712 233
12 3300031247 Ga0265340_10063370 Ga0265340_100633702 233
13 3300035725 Ga0373947_0045141 Ga0373947_0045141_456_1259 233
14 3300037068 Ga0373925_0653893 Ga0373925_0653893_34_837 233
15 3300049571 Ga0501034_0007617 Ga0501034_0007617_4596_5390 234
16 3300049569 Ga0501032_0007168 Ga0501032_0007168_2131_2922 236
17 3300005339 Ga0070660_100281766 Ga0070660_1002817662 237
18 3300005366 Ga0070659_100206928 Ga0070659_1002069282 237
19 3300005616 Ga0068852_100249404 Ga0068852_1002494042 237
20 3300006028 Ga0070717_10004185 Ga0070717_100041859 237
21 3300013104 Ga0157370_10182067 Ga0157370_101820672 237
22 3300025919 Ga0207657_10262164 Ga0207657_102621642 237
23 3300025932 Ga0207690_10089306 Ga0207690_100893062 237
24 3300026142 Ga0207698_10227683 Ga0207698_102276833 237
25 3300044656 Ga0466969_0039096 Ga0466969_0039096_505_1362 239
26 3300044684 Ga0466966_0010508 Ga0466966_0010508_3592_4449 239
27 3300045049 Ga0466959_0001397 Ga0466959_0001397_12661_13518 239
28 3300045836 Ga0466958_0036988 Ga0466958_0036988_1556_2413 239
29 3300048904 Ga0496101_0420716 Ga0496101_0420716_36_857 239
30 3300005445 Ga0070708_100078329 Ga0070708_1000783292 240
31 3300005467 Ga0070706_100576258 Ga0070706_1005762581 240
32 3300005468 Ga0070707_100019060 Ga0070707_1000190603 240
33 3300005471 Ga0070698_100025501 Ga0070698_1000255014 240
34 3300005471 Ga0070698_100057784 Ga0070698_1000577842 240
35 3300005545 Ga0070695_100141840 Ga0070695_1001418402 240
36 3300006914 Ga0075436_100043524 Ga0075436_1000435242 240
37 3300025910 Ga0207684_10000163 Ga0207684_100001632 240
38 3300025922 Ga0207646_10000493 Ga0207646_1000049348 240
39 3300025922 Ga0207646_10016962 Ga0207646_100169626 240
40 3300031728 Ga0316578_10033984 Ga0316578_100339843 240
41 3300044765 Ga0466970_0084741 Ga0466970_0084741_662_1528 240
42 3300046460 Ga0495638_0025592 Ga0495638_0025592_1074_1859 240
43 3300027671 Ga0209588_1000902 Ga0209588_10009025 241
44 3300014326 Ga0157380_10122231 Ga0157380_101222312 242
45 3300021388 Ga0213875_10022028 Ga0213875_100220282 243
46 3300039437 Ga0436365_0470528 Ga0436365_0470528_13_840 243
47 3300044673 Ga0453683_0001812 Ga0453683_0001812_2810_3652 243
48 3300049568 Ga0501031_0014859 Ga0501031_0014859_528_1319 243
49 3300049570 Ga0501033_0200716 Ga0501033_0200716_608_1399 243
50 3300049572 Ga0501036_0150046 Ga0501036_0150046_1162_1953 243
51 3300049574 Ga0501038_0144485 Ga0501038_0144485_512_1303 243
52 3300049579 Ga0501043_0026584 Ga0501043_0026584_1030_1821 243
53 3300049580 Ga0501046_0226967 Ga0501046_0226967_223_1014 243
54 3300049581 Ga0501047_0132836 Ga0501047_0132836_1107_1898 243
55 3300049822 Ga0501035_0162335 Ga0501035_0162335_464_1255 243
56 3300049824 Ga0501045_0073027 Ga0501045_0073027_20_811 243
57 3300005329 Ga0070683_100132261 Ga0070683_1001322614 244
58 3300005535 Ga0070684_100421452 Ga0070684_1004214522 244
59 3300006914 Ga0075436_100068020 Ga0075436_1000680202 244
60 3300025944 Ga0207661_10059988 Ga0207661_100599884 244
61 3300031727 Ga0316576_10105747 Ga0316576_101057472 244
62 3300036712 Ga0316584_0434801 Ga0316584_0434801_53_865 244
63 iso_pu_bacteria 2744054657 2745168862 244
64 iso_pu_bacteria 2816332336 2817617817 244
65 3300005468 Ga0070707_100017672 Ga0070707_1000176723 245
66 3300005468 Ga0070707_100063479 Ga0070707_1000634792 245
67 3300005471 Ga0070698_100030489 Ga0070698_1000304895 245
68 3300005518 Ga0070699_100331224 Ga0070699_1003312242 245
69 3300005548 Ga0070665_100216871 Ga0070665_1002168713 245
70 3300025922 Ga0207646_10000090 Ga0207646_1000009010 245
71 3300025922 Ga0207646_10044388 Ga0207646_100443884 245
72 3300028379 Ga0268266_10176005 Ga0268266_101760051 245
73 iso_pu_bacteria 2980182181 2980185200 245
74 3300005290 Ga0065712_10075996 Ga0065712_100759963 246
75 3300005445 Ga0070708_100002660 Ga0070708_1000026605 246
76 3300005468 Ga0070707_100048694 Ga0070707_1000486944 246
77 3300005471 Ga0070698_100517633 Ga0070698_1005176332 246
78 3300005518 Ga0070699_100025810 Ga0070699_1000258106 246
79 3300005536 Ga0070697_100012605 Ga0070697_1000126054 246
80 3300005536 Ga0070697_100034245 Ga0070697_1000342452 246
81 3300005618 Ga0068864_100306760 Ga0068864_1003067602 246
82 3300006028 Ga0070717_10000025 Ga0070717_10000025115 246
83 3300009094 Ga0111539_10621470 Ga0111539_106214701 246
84 3300025910 Ga0207684_10113366 Ga0207684_101133662 246
85 3300025922 Ga0207646_10035867 Ga0207646_100358675 246
86 3300026095 Ga0207676_10461738 Ga0207676_104617382 246
87 3300032126 Ga0307415_100207883 Ga0307415_1002078832 246
88 3300048912 Ga0496109_0393489 Ga0496109_0393489_485_1273 246
89 3300048915 Ga0496112_0310112 Ga0496112_0310112_277_1065 246
90 iso_pu_bacteria 2738541299 2738839688 246
91 iso_pu_bacteria 2818991441 2819567930 246
92 iso_pu_bacteria 2939593269 2939595342 246
93 iso_pu_bacteria 3001892409 3001892942 246
94 3300003203 JGI25406J46586_10021639 JGI25406J46586_100216392 247
95 3300004801 Ga0058860_11405464 Ga0058860_114054642 247
96 3300005330 Ga0070690_100241395 Ga0070690_1002413952 247
97 3300005340 Ga0070689_100271824 Ga0070689_1002718241 247
98 3300005365 Ga0070688_100250364 Ga0070688_1002503641 247
99 3300005435 Ga0070714_100003255 Ga0070714_10000325512 247
100 3300005445 Ga0070708_100047825 Ga0070708_1000478252 247
101 3300005468 Ga0070707_100172674 Ga0070707_1001726742 247
102 3300005471 Ga0070698_100070722 Ga0070698_1000707222 247
103 3300005518 Ga0070699_100036338 Ga0070699_1000363382 247
104 3300005617 Ga0068859_100077416 Ga0068859_1000774162 247
105 3300005985 Ga0081539_10003272 Ga0081539_1000327219 247
106 3300006173 Ga0070716_100073853 Ga0070716_1000738532 247
107 3300006844 Ga0075428_100423376 Ga0075428_1004233761 247
108 3300006871 Ga0075434_100037533 Ga0075434_1000375332 247
109 3300006931 Ga0097620_100077416 Ga0097620_1000774162 247
110 3300007265 Ga0099794_10078033 Ga0099794_100780332 247
111 3300007265 Ga0099794_10201656 Ga0099794_102016561 247
112 3300009094 Ga0111539_10037364 Ga0111539_100373642 247
113 3300009147 Ga0114129_11136387 Ga0114129_111363871 247
114 3300009553 Ga0105249_10051280 Ga0105249_100512806 247
115 3300013308 Ga0157375_10382547 Ga0157375_103825472 247
116 3300014325 Ga0163163_10851969 Ga0163163_108519691 247
117 3300028380 Ga0268265_10031274 Ga0268265_100312742 247
118 3300050507 nmdc:mga05p37_173828_c1 nmdc:mga05p37_173828_c1_21_812 247
119 3300050511 nmdc:mga08y16_123924_c1 nmdc:mga08y16_123924_c1_929_1720 247
120 3300050512 nmdc:mga0n895_11441_c1 nmdc:mga0n895_11441_c1_4172_4963 247
121 iso_pu_bacteria 2512564039 2512731340 247
122 iso_pu_bacteria 2671180694 2673823295 247
123 iso_pu_bacteria 2808606364 2808868926 247
124 iso_pu_bacteria 2864997549 2865001053 247
125 iso_pu_bacteria 2889295896 2889297754 247
126 iso_pu_bacteria 2980125574 2980127245 247
127 iso_pu_bacteria 2981284811 2981286234 247
128 iso_pu_bacteria 2981289755 2981291184 247
129 iso_pu_bacteria 2981980479 2981981879 247
130 iso_pu_bacteria 2981985349 2981986778 247
131 3300005436 Ga0070713_100450542 Ga0070713_1004505422 248
132 3300005445 Ga0070708_100000181 Ga0070708_10000018131 248
133 3300005445 Ga0070708_100016413 Ga0070708_1000164133 248
134 3300005467 Ga0070706_100000021 Ga0070706_10000002130 248
135 3300005467 Ga0070706_100023413 Ga0070706_1000234133 248
136 3300005468 Ga0070707_100000090 Ga0070707_10000009030 248
137 3300005518 Ga0070699_100000168 Ga0070699_10000016831 248
138 3300005549 Ga0070704_100001295 Ga0070704_10000129518 248
139 3300006038 Ga0075365_10029398 Ga0075365_100293983 248
140 3300006914 Ga0075436_100191113 Ga0075436_1001911132 248
141 3300009093 Ga0105240_10867519 Ga0105240_108675191 248
142 3300025910 Ga0207684_10000095 Ga0207684_10000095160 248
143 3300025910 Ga0207684_10087866 Ga0207684_100878662 248
144 3300025910 Ga0207684_10313123 Ga0207684_103131232 248
145 3300025922 Ga0207646_10000027 Ga0207646_10000027168 248
146 3300025922 Ga0207646_10000053 Ga0207646_10000053152 248
147 3300025922 Ga0207646_10031882 Ga0207646_100318823 248
148 3300031548 Ga0307408_100033279 Ga0307408_1000332793 248
149 3300031903 Ga0307407_10014361 Ga0307407_100143612 248
150 3300032002 Ga0307416_100023618 Ga0307416_1000236186 248
151 3300032004 Ga0307414_10216631 Ga0307414_102166312 248
152 3300032005 Ga0307411_10048909 Ga0307411_100489092 248
153 3300032126 Ga0307415_100144906 Ga0307415_1001449062 248
154 3300036401 Ga0373937_0077539 Ga0373937_0077539_1308_2102 248
155 3300046663 Ga0495635_0267053 Ga0495635_0267053_177_971 248
156 3300049686 Ga0501257_005205 Ga0501257_005205_1577_2371 248
157 3300050514 nmdc:mga08x19_160846_c1 nmdc:mga08x19_160846_c1_333_1127 248
158 3300050516 nmdc:mga0sz30_141225_c1 nmdc:mga0sz30_141225_c1_206_1000 248
159 iso_pu_bacteria 2643221735 2644739488 248
160 iso_pu_bacteria 2738543010 2739234970 248
161 iso_pu_bacteria 2919093281 2919093579 248
162 iso_pu_bacteria 2925326138 2925331534 248
163 iso_pu_bacteria 3006826541 3006827286 248
164 iso_pu_bacteria 8054280661 8054284166 248
165 iso_pu_bacteria 8055632911 8055633153 248
166 3300006852 Ga0075433_10024152 Ga0075433_100241524 249
167 3300028558 Ga0265326_10007692 Ga0265326_100076923 249
168 3300028577 Ga0265318_10011668 Ga0265318_100116683 249
169 3300031241 Ga0265325_10110052 Ga0265325_101100521 249
170 3300031242 Ga0265329_10006472 Ga0265329_100064725 249
171 3300031249 Ga0265339_10142210 Ga0265339_101422102 249
172 3300031712 Ga0265342_10006368 Ga0265342_100063685 249
173 3300048913 Ga0496110_0002134 Ga0496110_0002134_4070_4879 249
174 iso_pu_bacteria 2511231119 2511699078 249
175 iso_pu_bacteria 2540341094 2540606307 249
176 iso_pu_bacteria 2545555800 2545558294 249
177 iso_pu_bacteria 2554235283 2555470140 249
178 iso_pu_bacteria 2571042588 2573041629 249
179 iso_pu_bacteria 2576861424 2578336833 249
180 iso_pu_bacteria 2576861599 2578932719 249
181 iso_pu_bacteria 2619619294 2621275039 249
182 iso_pu_bacteria 2630968484 2631985007 249
183 iso_pu_bacteria 2648501850 2651530002 249
184 iso_pu_bacteria 2671180844 2674420388 249
185 iso_pu_bacteria 2684623153 2686996370 249
186 iso_pu_bacteria 2687453109 2687497625 249
187 iso_pu_bacteria 2695420354 2695627006 249
188 iso_pu_bacteria 2716884898 2717917184 249
189 iso_pu_bacteria 2808606399 2809054518 249
190 iso_pu_bacteria 2811994870 2812315500 249
191 iso_pu_bacteria 2821111986 2821115352 249
192 iso_pu_bacteria 2823526263 2823527486 249
193 iso_pu_bacteria 2860837431 2860838692 249
194 iso_pu_bacteria 2864733723 2864737887 249
195 iso_pu_bacteria 2877768649 2877769825 249
196 iso_pu_bacteria 2880169592 2880170826 249
197 iso_pu_bacteria 2881636855 2881637913 249
198 iso_pu_bacteria 2885526491 2885530874 249
199 iso_pu_bacteria 2889042446 2889043409 249
200 iso_pu_bacteria 2897109615 2897110809 249
201 iso_pu_bacteria 2904162308 2904166878 249
202 iso_pu_bacteria 2904490793 2904495401 249
203 iso_pu_bacteria 2904560550 2904562824 249
204 iso_pu_bacteria 2919160200 2919163398 249
205 iso_pu_bacteria 2931384279 2931386868 249
206 iso_pu_bacteria 2945991243 2945994537 249
207 iso_pu_bacteria 2946053406 2946057333 249
208 iso_pu_bacteria 2962290636 2962292077 249
209 iso_pu_bacteria 2969136845 2969138097 249
210 iso_pu_bacteria 2969141011 2969142279 249
211 iso_pu_bacteria 2969765954 2969768119 249
212 iso_pu_bacteria 2969770375 2969771882 249
213 iso_pu_bacteria 2971511577 2971515506 249
214 iso_pu_bacteria 2971893375 2971894577 249
215 iso_pu_bacteria 2980176882 2980180008 249
216 iso_pu_bacteria 2980492589 2980493875 249
217 iso_pu_bacteria 2984527788 2984527882 249
218 iso_pu_bacteria 2984532647 2984533995 249
219 iso_pu_bacteria 3006879489 3006880335 249
220 iso_pu_bacteria 8022630665 8022634035 249
221 iso_pu_bacteria 8022653035 8022656107 249
222 iso_pu_bacteria 8051952484 8051953352 249
223 iso_pu_bacteria 8052174270 8052177223 249
224 3300025292 Ga0209676_1001089 Ga0209676_100108911 250
225 3300044693 Ga0466961_0042610 Ga0466961_0042610_1160_1987 250
226 3300044735 Ga0466968_0011351 Ga0466968_0011351_1960_2787 250
227 3300045049 Ga0466959_0008629 Ga0466959_0008629_2861_3688 250
228 3300048928 Ga0496125_0238054 Ga0496125_0238054_44_967 250
229 iso_pu_bacteria 2888578766 2888584787 250
230 iso_pu_bacteria 2889049205 2889052751 250
231 iso_pu_bacteria 2904113452 2904116205 250
232 3300003187 JGI25151J46595_10003622 JGI25151J46595_100036229 251
233 3300003187 JGI25151J46595_10011767 JGI25151J46595_100117673 251
234 3300003751 Ga0055538_1000443 Ga0055538_10004435 251
235 3300005467 Ga0070706_100000005 Ga0070706_10000000584 251
236 3300005468 Ga0070707_100010957 Ga0070707_10001095710 251
237 3300005468 Ga0070707_100119163 Ga0070707_1001191632 251
238 3300005518 Ga0070699_100001316 Ga0070699_10000131612 251
239 3300006028 Ga0070717_10001031 Ga0070717_1000103112 251
240 3300006028 Ga0070717_10025224 Ga0070717_100252242 251
241 3300025224 Ga0209784_100114 Ga0209784_10011447 251
242 3300025292 Ga0209676_1028742 Ga0209676_10287422 251
243 3300025294 Ga0209025_1002223 Ga0209025_10022238 251
244 3300025294 Ga0209025_1006976 Ga0209025_10069765 251
245 3300025910 Ga0207684_10000194 Ga0207684_1000019440 251
246 3300025922 Ga0207646_10174896 Ga0207646_101748962 251
247 3300048919 Ga0496116_0050526 Ga0496116_0050526_1309_2115 251
248 3300049742 Ga0501080_0035126 Ga0501080_0035126_2847_3698 251
249 iso_pu_bacteria 2593339198 2595315877 251
250 3300048091 Ga0495626_0064000 Ga0495626_0064000_818_1645 252
251 iso_pu_bacteria 2563366752 2563929157 252
252 iso_pu_bacteria 2852673933 2852676551 252
253 iso_pu_bacteria 2908665501 2908666303 252
254 3300003187 JGI25151J46595_10000009 JGI25151J46595_10000009289 253
255 3300003578 Ga0006562J51391_1000090 Ga0006562J51391_10000902 253
256 3300003578 Ga0006562J51391_1000094 Ga0006562J51391_10000941 253
257 3300009036 Ga0105244_10043073 Ga0105244_100430732 253
258 3300025225 Ga0209566_102001 Ga0209566_1020012 253
259 3300025229 Ga0209147_103817 Ga0209147_1038173 253
260 3300025233 Ga0209437_101123 Ga0209437_1011238 253
261 3300025294 Ga0209025_1000001 Ga0209025_10000011751 253
262 3300041404 Ga0439436_0006999 Ga0439436_0006999_1634_2443 253
263 3300042007 Ga0439449_0001488 Ga0439449_0001488_841_1650 253
264 3300042015 Ga0439462_0003264 Ga0439462_0003264_2732_3541 253
265 3300046492 Ga0495585_0017733 Ga0495585_0017733_2012_2842 253
266 3300048905 Ga0496102_0386729 Ga0496102_0386729_328_1137 253
267 3300048915 Ga0496112_0093262 Ga0496112_0093262_1337_2146 253
268 3300048916 Ga0496113_0301297 Ga0496113_0301297_328_1137 253
269 3300048924 Ga0496121_0084996 Ga0496121_0084996_960_1772 253
270 3300048928 Ga0496125_0017349 Ga0496125_0017349_453_1265 253
271 3300049581 Ga0501047_0205785 Ga0501047_0205785_169_990 253
272 iso_pu_bacteria 2818991468 2819725078 253
273 iso_pu_bacteria 2919726948 2919729511 253
274 iso_pu_bacteria 2954773129 2954775015 253

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08543

Phos_pyr_kin

Phosphomethylpyrimidine kinase

44

288

0.99

PF00294

PfkB

pfkB family carbohydrate kinase

117

273

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4c5m-assembly1.cif.gz_B structure of the pyridoxal kinase from staphylococcus aureus in complex with amp-pcp 0.9263 1 248
4c5k-assembly2.cif.gz_A structure of the pyridoxal kinase from staphylococcus aureus in complex with adp 0.9214 1 248
2i5b-assembly2.cif.gz_D the crystal structure of an adp complex of bacillus subtilis pyridoxal kinase provides evidence for the parralel emergence of enzyme activity during evolution 0.918 2 247
4c5m-assembly2.cif.gz_A structure of the pyridoxal kinase from staphylococcus aureus in complex with amp-pcp 0.9178 1 248
4c5m-assembly2.cif.gz_C structure of the pyridoxal kinase from staphylococcus aureus in complex with amp-pcp 0.917 1 248
ID Description Score Start End Superfamily
af_Q2FWG1_2_274_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9522 1 248 3.40.1190.20
af_O94266_18_315_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9341 1 246 3.40.1190.20
af_O94265_1_284_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9325 2 246 3.40.1190.20
af_Q2FWG1_2_274_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9303 1 248 3.40.1190.20
af_P9WG77_1_265_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9244 1 247 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A5S9M6V5-F1-model_v4 Pyridoxamine kinase/Phosphomethylpyrimidine kinase domain-containing protein 0.9967 114 253 GO:0005829
GO:0008902
GO:0008972
GO:0009228
AF-A0A5S9M6V5-F1-model_v4 Pyridoxamine kinase/Phosphomethylpyrimidine kinase domain-containing protein 0.9827 114 253 GO:0005829
GO:0008902
GO:0008972
GO:0009228
AF-A0A4U2PT71-F1-model_v4 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (EC 2.7.1.49) (Hydroxymethylpyrimidine kinase) (Hydroxymethylpyrimidine phosphate kinase) 0.9677 1 249 GO:0005829
GO:0008902
GO:0008972
GO:0009228
AF-A0A4Y8PQ36-F1-model_v4 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (EC 2.7.1.49) (Hydroxymethylpyrimidine kinase) (Hydroxymethylpyrimidine phosphate kinase) 0.962 1 252 GO:0005829
GO:0008902
GO:0008972
GO:0009228
AF-A0A349LG84-F1-model_v4 Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.9608 145 245 GO:0005829
GO:0008902
GO:0008972
GO:0009228

Feature Viewer

pLDDT pTM Quality
88.52 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map