F379537

General Info

Members Datasets Scaffolds Average Seq Length
274 163 548 268

Family's Representative Sequence

Representative Sequence 3300005434|Ga0070709_10006852|Ga0070709_100068523
Length 293
Sequence VTERAEAHLLPSTSFLSDLFGLTGQVAVVTGGMGRLGARYVLALADAGASVAAFDLAGKAHPIVEQAVADGRRVSVHDVDVTVRADVDRAIAQVTRRFGTPTILINNAGLAASPADTALETGRFERYPETAWDAMLESHLKSALVASQSFIAQYRQDRSANASAIPPGSIINISSTYGVVSPDQSVYEYRRRDGAEFFKPVGYSVAKSGMLNFTRWLAEYCAPFGVRVNTLVPGGVREPEHTPEFVTEYEKRTPLGRMASEDDYNGAVLFLASRASAYMTGSTLVVDGGWTAR

Samples

Sample ID Description Type Environment
1 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
48 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
66 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
67 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
102 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
103 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
104 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
105 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
107 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
108 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
109 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
110 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
118 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
121 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
126 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
130 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
133 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
161 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
162 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
163 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.27
Metatranscriptomes 0
Isolates 0.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.19
Nodule 0
Rhizoplane 3.65
Rhizosphere 93.8
Stem 0
Stem Tuber 0
Unclassified 5.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070709_10006852 3300005434 Bacteria 6225
2 JGI25152J39213_1000116 3300002773 Bacteria 55384
3 JGI25151J46595_10075925 3300003187 Bacteria 995
4 Ga0070683_100207282 3300005329 Bacteria 1862
5 Ga0070666_10066467 3300005335 Bacteria 2447
6 Ga0070666_10120130 3300005335 Bacteria 1822
7 Ga0068868_100017874 3300005338 Bacteria 5290
8 Ga0070687_100225092 3300005343 Bacteria 1151
9 Ga0070669_100008851 3300005353 Bacteria 7182
10 Ga0070675_100011005 3300005354 Bacteria 7084
11 Ga0070671_100159596 3300005355 Bacteria 1906
12 Ga0070673_100136983 3300005364 Bacteria 2062
13 Ga0070673_100329882 3300005364 Bacteria 1350
14 Ga0070688_100014817 3300005365 Bacteria 4423
15 Ga0070688_100363121 3300005365 Bacteria 1063
16 Ga0070667_100018356 3300005367 Bacteria 5801
17 Ga0070713_100051169 3300005436 Bacteria 3416
18 Ga0070694_100056816 3300005444 Bacteria 2659
19 Ga0070678_100127616 3300005456 Bacteria 2016
20 Ga0070662_100606804 3300005457 Bacteria 921
21 Ga0068867_100115560 3300005459 Bacteria 2067
22 Ga0070685_10028192 3300005466 Bacteria 3110
23 Ga0070707_100111680 3300005468 Bacteria 2651
24 Ga0070707_100121258 3300005468 Bacteria 2539
25 Ga0070707_100157957 3300005468 Bacteria 2209
26 Ga0070698_100263719 3300005471 Bacteria 1655
27 Ga0070699_100008307 3300005518 Bacteria 9003
28 Ga0070699_100027794 3300005518 Bacteria 4878
29 Ga0070699_100086562 3300005518 Bacteria 2735
30 Ga0070679_100338286 3300005530 Bacteria 1453
31 Ga0070697_100027693 3300005536 Bacteria 4535
32 Ga0070697_100035499 3300005536 Bacteria 4022
33 Ga0070697_100238653 3300005536 Bacteria 1552
34 Ga0070697_100241734 3300005536 Bacteria 1542
35 Ga0068853_100517392 3300005539 Bacteria 1128
36 Ga0070695_100002728 3300005545 Bacteria 10232
37 Ga0070696_100037176 3300005546 Bacteria 3358
38 Ga0070665_100042340 3300005548 Bacteria 4577
39 Ga0070665_100043594 3300005548 Bacteria 4508
40 Ga0070704_100003922 3300005549 Bacteria 8564
41 Ga0068859_100061919 3300005617 Bacteria 3771
42 Ga0068859_100076403 3300005617 Bacteria 3390
43 Ga0068859_100330572 3300005617 Bacteria 1618
44 Ga0068859_100418240 3300005617 Unclassified 1437
45 Ga0068864_100014032 3300005618 Bacteria 6645
46 Ga0068864_100297199 3300005618 Bacteria 1511
47 Ga0068864_100337676 3300005618 Unclassified 1419
48 Ga0068866_10043091 3300005718 Bacteria 2250
49 Ga0068861_100054758 3300005719 Bacteria 3040
50 Ga0068861_100323894 3300005719 Bacteria 1343
51 Ga0068863_100717982 3300005841 Bacteria 994
52 Ga0068858_100007939 3300005842 Bacteria 10226
53 Ga0068858_100113067 3300005842 Bacteria 2536
54 Ga0068858_100218942 3300005842 Bacteria 1803
55 Ga0068858_100318214 3300005842 Bacteria 1487
56 Ga0068858_100318933 3300005842 Bacteria 1485
57 Ga0068862_100058310 3300005844 Bacteria 3312
58 Ga0068862_100506698 3300005844 Bacteria 1146
59 Ga0081539_10006489 3300005985 Bacteria 11191
60 Ga0075432_10065227 3300006058 Bacteria 1302
61 Ga0097621_100002191 3300006237 Bacteria 13373
62 Ga0097621_100020684 3300006237 Bacteria 5074
63 Ga0097621_100200361 3300006237 Bacteria 1733
64 Ga0097621_100309095 3300006237 Bacteria 1398
65 Ga0068871_100000708 3300006358 Bacteria 22638
66 Ga0068871_100009876 3300006358 Bacteria 6929
67 Ga0068871_100221921 3300006358 Bacteria 1638
68 Ga0075433_10169645 3300006852 Bacteria 1942
69 Ga0075434_100000001 3300006871 Bacteria 160353
70 Ga0075434_100066152 3300006871 Bacteria 3600
71 Ga0075434_100106913 3300006871 Bacteria 2808
72 Ga0075434_100137827 3300006871 Bacteria 2460
73 Ga0068865_100006447 3300006881 Bacteria 7158
74 Ga0075436_100005043 3300006914 Bacteria 9082
75 Ga0075436_100050946 3300006914 Bacteria 2857
76 Ga0075436_100269645 3300006914 Bacteria 1215
77 Ga0097620_100061921 3300006931 Bacteria 3771
78 Ga0097620_100076403 3300006931 Bacteria 3390
79 Ga0097620_100330564 3300006931 Bacteria 1618
80 Ga0097620_100418228 3300006931 Unclassified 1437
81 Ga0075435_100000136 3300007076 Bacteria 41621
82 Ga0075435_100003967 3300007076 Bacteria 10116
83 Ga0075435_100006425 3300007076 Bacteria 8310
84 Ga0099794_10212325 3300007265 Bacteria 993
85 Ga0105244_10062509 3300009036 Bacteria 1872
86 Ga0105240_10396776 3300009093 Bacteria 1555
87 Ga0111539_10231055 3300009094 Bacteria 2154
88 Ga0111539_10314207 3300009094 Bacteria 1823
89 Ga0111539_11020660 3300009094 Bacteria 962
90 Ga0105245_10358165 3300009098 Bacteria 1447
91 Ga0105247_10007074 3300009101 Bacteria 6895
92 Ga0114129_10005858 3300009147 Bacteria 17400
93 Ga0114129_10006038 3300009147 Bacteria 17172
94 Ga0114129_10008503 3300009147 Bacteria 14629
95 Ga0114129_10100802 3300009147 Bacteria 3996
96 Ga0114129_10118929 3300009147 Bacteria 3639
97 Ga0114129_10181081 3300009147 Bacteria 2867
98 Ga0114129_10190743 3300009147 Bacteria 2783
99 Ga0114129_10250026 3300009147 Unclassified 2380
100 Ga0114129_10272544 3300009147 Bacteria 2264
101 Ga0105243_10208101 3300009148 Bacteria 1720
102 Ga0105242_10000614 3300009176 Bacteria 27893
103 Ga0105248_10023283 3300009177 Bacteria 6879
104 Ga0105248_10028945 3300009177 Bacteria 6175
105 Ga0105248_10060863 3300009177 Bacteria 4239
106 Ga0105248_10551659 3300009177 Bacteria 1300
107 Ga0105248_10730556 3300009177 Bacteria 1117
108 Ga0105246_10000417 3300011119 Bacteria 22760
109 Ga0105246_10378650 3300011119 Bacteria 1169
110 Ga0157374_10008708 3300013296 Bacteria 8678
111 Ga0157378_10119257 3300013297 Bacteria 2429
112 Ga0157378_10271498 3300013297 Bacteria 1631
113 Ga0157375_10150104 3300013308 Bacteria 2465
114 Ga0157375_10925999 3300013308 Bacteria 1014
115 Ga0163163_10018045 3300014325 Bacteria 6593
116 Ga0163163_10081374 3300014325 Bacteria 3240
117 Ga0163163_10167902 3300014325 Bacteria 2241
118 Ga0163163_10461535 3300014325 Bacteria 1331
119 Ga0157379_10022943 3300014968 Bacteria 5532
120 Ga0157379_10032963 3300014968 Bacteria 4619
121 Ga0157379_10077378 3300014968 Bacteria 2979
122 Ga0157379_10098380 3300014968 Bacteria 2626
123 Ga0157376_10031485 3300014969 Bacteria 4249
124 Ga0157376_10033652 3300014969 Bacteria 4128
125 Ga0157376_10046469 3300014969 Bacteria 3580
126 Ga0157376_10122018 3300014969 Bacteria 2311
127 Ga0157376_10268182 3300014969 Unclassified 1602
128 Ga0213876_10020774 3300021384 Bacteria 3472
129 Ga0207425_1003763 3300025245 Bacteria 4740
130 Ga0209129_1000028 3300025258 Bacteria 405451
131 Ga0209025_1009915 3300025294 Bacteria 6547
132 Ga0209051_1010250 3300025303 Bacteria 4755
133 Ga0207642_10036022 3300025899 Bacteria 2120
134 Ga0207710_10006135 3300025900 Bacteria 5146
135 Ga0207680_10079111 3300025903 Bacteria 2061
136 Ga0207695_10672543 3300025913 Bacteria 916
137 Ga0207662_10184844 3300025918 Bacteria 1343
138 Ga0207657_10240892 3300025919 Bacteria 1444
139 Ga0207652_10492037 3300025921 Bacteria 1104
140 Ga0207646_10142417 3300025922 Bacteria 2160
141 Ga0207646_10163577 3300025922 Bacteria 2009
142 Ga0207646_10272416 3300025922 Bacteria 1530
143 Ga0207681_10030294 3300025923 Bacteria 3526
144 Ga0207659_10006203 3300025926 Bacteria 7311
145 Ga0207687_10031854 3300025927 Bacteria 3567
146 Ga0207687_10053737 3300025927 Unclassified 2815
147 Ga0207700_10156388 3300025928 Bacteria 1889
148 Ga0207644_10003958 3300025931 Bacteria 9614
149 Ga0207644_10322048 3300025931 Bacteria 1250
150 Ga0207686_10154112 3300025934 Bacteria 1603
151 Ga0207670_10153198 3300025936 Bacteria 1713
152 Ga0207665_10052732 3300025939 Bacteria 2740
153 Ga0207691_10015760 3300025940 Bacteria 7183
154 Ga0207711_10033918 3300025941 Bacteria 4321
155 Ga0207711_10079380 3300025941 Bacteria 2865
156 Ga0207711_10229436 3300025941 Unclassified 1700
157 Ga0207651_10170234 3300025960 Bacteria 1717
158 Ga0207668_10015806 3300025972 Bacteria 4698
159 Ga0207658_10065118 3300025986 Bacteria 2736
160 Ga0207677_10141714 3300026023 Bacteria 1841
161 Ga0207703_10029061 3300026035 Bacteria 4361
162 Ga0207703_10032217 3300026035 Bacteria 4148
163 Ga0207703_10034670 3300026035 Bacteria 4006
164 Ga0207703_10062215 3300026035 Bacteria 3058
165 Ga0207703_10275167 3300026035 Bacteria 1527
166 Ga0207641_10001189 3300026088 Bacteria 26093
167 Ga0207641_10046405 3300026088 Bacteria 3662
168 Ga0207648_10277165 3300026089 Bacteria 1499
169 Ga0207676_10015961 3300026095 Bacteria 5432
170 Ga0207676_10168613 3300026095 Bacteria 1905
171 Ga0207676_10225365 3300026095 Bacteria 1672
172 Ga0207675_100046418 3300026118 Bacteria 4058
173 Ga0207675_100089553 3300026118 Bacteria 2892
174 Ga0207683_10116194 3300026121 Bacteria 2398
175 Ga0207428_10068740 3300027907 Bacteria 2786
176 Ga0268266_10029140 3300028379 Bacteria 4692
177 Ga0268266_10033799 3300028379 Bacteria 4346
178 Ga0268265_10097313 3300028380 Bacteria 2367
179 Ga0268264_10025482 3300028381 Bacteria 4832
180 Ga0268264_10449370 3300028381 Bacteria 1248
181 Ga0268264_10813643 3300028381 Bacteria 934
182 Ga0265332_10004707 3300031238 Bacteria 6367
183 Ga0265314_10049154 3300031711 Bacteria 2955
184 Ga0307410_10125844 3300031852 Bacteria 1876
185 Ga0373934_0112607 3300035086 Unclassified 1104
186 Ga0373936_0028558 3300035113 Bacteria 2193
187 Ga0373939_0010815 3300035114 Bacteria 2293
188 Ga0373956_0107685 3300035119 Unclassified 1296
189 Ga0373943_0005235 3300035170 Bacteria 5835
190 Ga0373955_0038780 3300035172 Bacteria 2540
191 Ga0373924_0018430 3300035410 Bacteria 2689
192 Ga0373935_0005778 3300035692 Bacteria 7317
193 Ga0373927_0044989 3300035695 Unclassified 2856
194 Ga0373933_0056198 3300035724 Bacteria 2362
195 Ga0373947_0030613 3300035725 Bacteria 3163
196 Ga0373937_0057942 3300036401 Bacteria 3559
197 Ga0373925_0048268 3300037068 Bacteria 3172
198 Ga0373925_0562662 3300037068 Bacteria 938
199 Ga0439442_016487 3300042002 Bacteria 1523
200 Ga0439435_0055004 3300042436 Bacteria 1147
201 Ga0466958_0084798 3300045836 Bacteria 1954
202 Ga0495629_0145381 3300046459 Bacteria 1649
203 Ga0495664_0276265 3300046477 Bacteria 1015
204 Ga0495628_0318832 3300046516 Bacteria 1147
205 Ga0495630_0003615 3300046517 Bacteria 10775
206 Ga0495630_0205157 3300046517 Bacteria 1505
207 Ga0495652_0047974 3300046529 Bacteria 3662
208 Ga0495586_0201976 3300046535 Bacteria 1127
209 Ga0495586_0232100 3300046535 Bacteria 1050
210 Ga0495645_0033304 3300046543 Bacteria 3759
211 Ga0495635_0116045 3300046663 Bacteria 1827
212 Ga0495599_0176440 3300046678 Bacteria 1318
213 Ga0495658_0023977 3300046683 Bacteria 3245
214 Ga0495658_0222139 3300046683 Bacteria 1183
215 Ga0495658_0268712 3300046683 Bacteria 1075
216 Ga0495669_0002504 3300046684 Bacteria 7500
217 Ga0495613_0000186 3300046689 Bacteria 60855
218 Ga0495670_0078555 3300046691 Bacteria 1679
219 Ga0495600_0047023 3300046809 Bacteria 2815
220 Ga0495604_0029299 3300047317 Bacteria 4379
221 Ga0495674_0051086 3300047319 Bacteria 3645
222 Ga0495674_0446847 3300047319 Bacteria 1039
223 Ga0495674_0486863 3300047319 Bacteria 988
224 Ga0495680_0102905 3300047322 Unclassified 2126
225 Ga0495675_0083548 3300047444 Bacteria 2010
226 Ga0495675_0146865 3300047444 Bacteria 1459
227 Ga0495684_0000099 3300047471 Bacteria 60765
228 Ga0495684_0159531 3300047471 Bacteria 1683
229 Ga0495684_0327056 3300047471 Bacteria 1094
230 Ga0496101_0468527 3300048904 Bacteria 994
231 Ga0496104_0223402 3300048907 Bacteria 1796
232 Ga0496104_0237016 3300048907 Bacteria 1736
233 Ga0496105_0326915 3300048908 Bacteria 1228
234 Ga0496106_0085353 3300048909 Bacteria 2431
235 Ga0496108_0000556 3300048911 Bacteria 29280
236 Ga0496112_0040067 3300048915 Bacteria 4579
237 Ga0496113_0142680 3300048916 Bacteria 1885
238 Ga0496114_0059491 3300048917 Bacteria 3192
239 Ga0496115_0292001 3300048918 Bacteria 1337
240 Ga0501067_0194384 3300049583 Bacteria 1130
241 Ga0501073_0009434 3300049589 Bacteria 7204
242 Ga0501076_0322604 3300049592 Bacteria 1267
243 nmdc:mga05p37_21022_c1 3300050507 Bacteria 7898
244 nmdc:mga05p37_359502_c1 3300050507 Bacteria 1712
245 nmdc:mga05p37_4392_c1 3300050507 Bacteria 16472
246 nmdc:mga05p37_47414_c1 3300050507 Bacteria 5284
247 nmdc:mga05p37_537136_c1 3300050507 Bacteria 1334
248 nmdc:mga05p37_664433_c1 3300050507 Bacteria 1164
249 nmdc:mga05p37_7247_c1 3300050507 Bacteria 13083
250 nmdc:mga09592_244740_c1 3300050508 Bacteria 1554
251 nmdc:mga06r32_720168_c1 3300050510 Bacteria 962
252 nmdc:mga08y16_192395_c1 3300050511 Bacteria 2116
253 nmdc:mga08y16_428183_c1 3300050511 Bacteria 1352
254 nmdc:mga0n895_203944_c1 3300050512 Bacteria 2008
255 nmdc:mga0n895_222860_c1 3300050512 Bacteria 1914
256 nmdc:mga0n895_27_c1 3300050512 Bacteria 89407
257 nmdc:mga0n895_34139_c1 3300050512 Bacteria 4895
258 nmdc:mga0n895_392849_c1 3300050512 Unclassified 1403
259 nmdc:mga0rr50_118267_c1 3300050513 Bacteria 2106
260 nmdc:mga0rr50_6_c1 3300050513 Bacteria 310626
261 nmdc:mga08x19_13290_c1 3300050514 Bacteria 4974
262 nmdc:mga08x19_155884_c1 3300050514 Bacteria 1549
263 nmdc:mga08x19_175_c1 3300050514 Bacteria 52180
264 nmdc:mga08x19_288105_c1 3300050514 Bacteria 1139
265 nmdc:mga0a205_207887_c1 3300050515 Unclassified 1846
266 nmdc:mga0a205_316994_c1 3300050515 Bacteria 1431
267 nmdc:mga0a205_340014_c1 3300050515 Bacteria 1369
268 nmdc:mga0a205_416183_c1 3300050515 Unclassified 1206
269 Ga0495601_0014220 3300053077 Bacteria 4795
270 Ga0495601_0112316 3300053077 Unclassified 1765
271 Ga0495595_0218708 3300053084 Bacteria 950
272 Ga0495619_0138772 3300053085 Bacteria 1673
273 2844849506 2844849076 Bacteria 4091819
274 2946026390 2946024296 Bacteria 3508095
275 Ga0070709_10006852
276 JGI25152J39213_1000116
277 JGI25151J46595_10075925
278 Ga0070683_100207282
279 Ga0070666_10066467
280 Ga0070666_10120130
281 Ga0068868_100017874
282 Ga0070687_100225092
283 Ga0070669_100008851
284 Ga0070675_100011005
285 Ga0070671_100159596
286 Ga0070673_100136983
287 Ga0070673_100329882
288 Ga0070688_100014817
289 Ga0070688_100363121
290 Ga0070667_100018356
291 Ga0070713_100051169
292 Ga0070694_100056816
293 Ga0070678_100127616
294 Ga0070662_100606804
295 Ga0068867_100115560
296 Ga0070685_10028192
297 Ga0070707_100111680
298 Ga0070707_100121258
299 Ga0070707_100157957
300 Ga0070698_100263719
301 Ga0070699_100008307
302 Ga0070699_100027794
303 Ga0070699_100086562
304 Ga0070679_100338286
305 Ga0070697_100027693
306 Ga0070697_100035499
307 Ga0070697_100238653
308 Ga0070697_100241734
309 Ga0068853_100517392
310 Ga0070695_100002728
311 Ga0070696_100037176
312 Ga0070665_100042340
313 Ga0070665_100043594
314 Ga0070704_100003922
315 Ga0068859_100061919
316 Ga0068859_100076403
317 Ga0068859_100330572
318 Ga0068859_100418240
319 Ga0068864_100014032
320 Ga0068864_100297199
321 Ga0068864_100337676
322 Ga0068866_10043091
323 Ga0068861_100054758
324 Ga0068861_100323894
325 Ga0068863_100717982
326 Ga0068858_100007939
327 Ga0068858_100113067
328 Ga0068858_100218942
329 Ga0068858_100318214
330 Ga0068858_100318933
331 Ga0068862_100058310
332 Ga0068862_100506698
333 Ga0081539_10006489
334 Ga0075432_10065227
335 Ga0097621_100002191
336 Ga0097621_100020684
337 Ga0097621_100200361
338 Ga0097621_100309095
339 Ga0068871_100000708
340 Ga0068871_100009876
341 Ga0068871_100221921
342 Ga0075433_10169645
343 Ga0075434_100000001
344 Ga0075434_100066152
345 Ga0075434_100106913
346 Ga0075434_100137827
347 Ga0068865_100006447
348 Ga0075436_100005043
349 Ga0075436_100050946
350 Ga0075436_100269645
351 Ga0097620_100061921
352 Ga0097620_100076403
353 Ga0097620_100330564
354 Ga0097620_100418228
355 Ga0075435_100000136
356 Ga0075435_100003967
357 Ga0075435_100006425
358 Ga0099794_10212325
359 Ga0105244_10062509
360 Ga0105240_10396776
361 Ga0111539_10231055
362 Ga0111539_10314207
363 Ga0111539_11020660
364 Ga0105245_10358165
365 Ga0105247_10007074
366 Ga0114129_10005858
367 Ga0114129_10006038
368 Ga0114129_10008503
369 Ga0114129_10100802
370 Ga0114129_10118929
371 Ga0114129_10181081
372 Ga0114129_10190743
373 Ga0114129_10250026
374 Ga0114129_10272544
375 Ga0105243_10208101
376 Ga0105242_10000614
377 Ga0105248_10023283
378 Ga0105248_10028945
379 Ga0105248_10060863
380 Ga0105248_10551659
381 Ga0105248_10730556
382 Ga0105246_10000417
383 Ga0105246_10378650
384 Ga0157374_10008708
385 Ga0157378_10119257
386 Ga0157378_10271498
387 Ga0157375_10150104
388 Ga0157375_10925999
389 Ga0163163_10018045
390 Ga0163163_10081374
391 Ga0163163_10167902
392 Ga0163163_10461535
393 Ga0157379_10022943
394 Ga0157379_10032963
395 Ga0157379_10077378
396 Ga0157379_10098380
397 Ga0157376_10031485
398 Ga0157376_10033652
399 Ga0157376_10046469
400 Ga0157376_10122018
401 Ga0157376_10268182
402 Ga0213876_10020774
403 Ga0207425_1003763
404 Ga0209129_1000028
405 Ga0209025_1009915
406 Ga0209051_1010250
407 Ga0207642_10036022
408 Ga0207710_10006135
409 Ga0207680_10079111
410 Ga0207695_10672543
411 Ga0207662_10184844
412 Ga0207657_10240892
413 Ga0207652_10492037
414 Ga0207646_10142417
415 Ga0207646_10163577
416 Ga0207646_10272416
417 Ga0207681_10030294
418 Ga0207659_10006203
419 Ga0207687_10031854
420 Ga0207687_10053737
421 Ga0207700_10156388
422 Ga0207644_10003958
423 Ga0207644_10322048
424 Ga0207686_10154112
425 Ga0207670_10153198
426 Ga0207665_10052732
427 Ga0207691_10015760
428 Ga0207711_10033918
429 Ga0207711_10079380
430 Ga0207711_10229436
431 Ga0207651_10170234
432 Ga0207668_10015806
433 Ga0207658_10065118
434 Ga0207677_10141714
435 Ga0207703_10029061
436 Ga0207703_10032217
437 Ga0207703_10034670
438 Ga0207703_10062215
439 Ga0207703_10275167
440 Ga0207641_10001189
441 Ga0207641_10046405
442 Ga0207648_10277165
443 Ga0207676_10015961
444 Ga0207676_10168613
445 Ga0207676_10225365
446 Ga0207675_100046418
447 Ga0207675_100089553
448 Ga0207683_10116194
449 Ga0207428_10068740
450 Ga0268266_10029140
451 Ga0268266_10033799
452 Ga0268265_10097313
453 Ga0268264_10025482
454 Ga0268264_10449370
455 Ga0268264_10813643
456 Ga0265332_10004707
457 Ga0265314_10049154
458 Ga0307410_10125844
459 Ga0373934_0112607
460 Ga0373936_0028558
461 Ga0373939_0010815
462 Ga0373956_0107685
463 Ga0373943_0005235
464 Ga0373955_0038780
465 Ga0373924_0018430
466 Ga0373935_0005778
467 Ga0373927_0044989
468 Ga0373933_0056198
469 Ga0373947_0030613
470 Ga0373937_0057942
471 Ga0373925_0048268
472 Ga0373925_0562662
473 Ga0439442_016487
474 Ga0439435_0055004
475 Ga0466958_0084798
476 Ga0495629_0145381
477 Ga0495664_0276265
478 Ga0495628_0318832
479 Ga0495630_0003615
480 Ga0495630_0205157
481 Ga0495652_0047974
482 Ga0495586_0201976
483 Ga0495586_0232100
484 Ga0495645_0033304
485 Ga0495635_0116045
486 Ga0495599_0176440
487 Ga0495658_0023977
488 Ga0495658_0222139
489 Ga0495658_0268712
490 Ga0495669_0002504
491 Ga0495613_0000186
492 Ga0495670_0078555
493 Ga0495600_0047023
494 Ga0495604_0029299
495 Ga0495674_0051086
496 Ga0495674_0446847
497 Ga0495674_0486863
498 Ga0495680_0102905
499 Ga0495675_0083548
500 Ga0495675_0146865
501 Ga0495684_0000099
502 Ga0495684_0159531
503 Ga0495684_0327056
504 Ga0496101_0468527
505 Ga0496104_0223402
506 Ga0496104_0237016
507 Ga0496105_0326915
508 Ga0496106_0085353
509 Ga0496108_0000556
510 Ga0496112_0040067
511 Ga0496113_0142680
512 Ga0496114_0059491
513 Ga0496115_0292001
514 Ga0501067_0194384
515 Ga0501073_0009434
516 Ga0501076_0322604
517 nmdc:mga05p37_21022_c1
518 nmdc:mga05p37_359502_c1
519 nmdc:mga05p37_4392_c1
520 nmdc:mga05p37_47414_c1
521 nmdc:mga05p37_537136_c1
522 nmdc:mga05p37_664433_c1
523 nmdc:mga05p37_7247_c1
524 nmdc:mga09592_244740_c1
525 nmdc:mga06r32_720168_c1
526 nmdc:mga08y16_192395_c1
527 nmdc:mga08y16_428183_c1
528 nmdc:mga0n895_203944_c1
529 nmdc:mga0n895_222860_c1
530 nmdc:mga0n895_27_c1
531 nmdc:mga0n895_34139_c1
532 nmdc:mga0n895_392849_c1
533 nmdc:mga0rr50_118267_c1
534 nmdc:mga0rr50_6_c1
535 nmdc:mga08x19_13290_c1
536 nmdc:mga08x19_155884_c1
537 nmdc:mga08x19_175_c1
538 nmdc:mga08x19_288105_c1
539 nmdc:mga0a205_207887_c1
540 nmdc:mga0a205_316994_c1
541 nmdc:mga0a205_340014_c1
542 nmdc:mga0a205_416183_c1
543 Ga0495601_0014220
544 Ga0495601_0112316
545 Ga0495595_0218708
546 Ga0495619_0138772
547 2844849506
548 2946026390

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

25

189

0.91

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

31

291

0.87

PF08659

KR

KR domain

25

132

0.77

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

27

199

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g9m-assembly1.cif.gz_A acinetobacter_baumannii short-chain dehydrogenase 0.913 10 259
8cxa-assembly1.cif.gz_D crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase from mycobacterium smegmatis with bound nad 0.9119 10 260
4m8s-assembly1.cif.gz_D crystal structure of 3-ketoacyl -(acyl carrier protein) reductase (fabg) from neisseria meningitidis 0.8966 8 260
4rzh-assembly1.cif.gz_B crystal structure of fabg from synechocystis sp. pcc 6803 0.8942 13 260
5t5q-assembly1.cif.gz_A crystal structure of short-chain dehydrogenase/reductase sdr:glucose/ribitol dehydrogenase from brucella melitensis 0.8941 8 260
ID Description Score Start End Superfamily
af_A0A0R0HUJ2_8_65_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9428 12 63 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9042 6 82 3.40.50.720
af_K7MUD1_29_120_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9006 13 91 3.40.50.720
af_Q0JBH4_12_100_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8958 13 91 3.40.50.720
5k9zA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8901 10 260 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2E5J8A3-F1-model_v4 Short-chain dehydrogenase 0.92 1 261 GO:0016491
AF-A0A2J8GEZ9-F1-model_v4 Short-chain dehydrogenase 0.9197 1 264 GO:0016491
AF-A0A6J7USK9-F1-model_v4 Unannotated protein 0.9177 1 201 GO:0016616
AF-A0A7X5Q4K5-F1-model_v4 NADP-dependent 3-hydroxy acid dehydrogenase YdfG (EC 1.1.1.381) 0.9167 7 188 GO:0016491
AF-A0A535GPX0-F1-model_v4 SDR family oxidoreductase 0.9144 10 206 GO:0016616
GO:0030497

Map