F379142

General Info

Members Datasets Scaffolds Average Seq Length
273 192 265 390

Family's Representative Sequence

Representative Sequence 3300035172|Ga0373955_0018829|Ga0373955_0018829_1017_2279
Length 420
Sequence MSETGTHRTRDPTQLDARPWLPRQPAAMDFRPTPAEERFRREVHDWLMANLPEGWGTPGYHKPSEPEEKVAFGRSWQRKLSEGGWAGLHWPREYGGRGATPLEQFLFAEEYTRVGAPPMIDIGVGPGLVGPTLIHHGTEEQKRRFLPRILTGDDIWCQGFSEPNAGSDLANCRTRADLDGDVFRVTGQKIWTSYARFADWCILVVRTDFQAPKHRGLSFLLVDMKSPGITIRPLVEMTGVAWFNEVFFDDVRVPRENMVGRLNDGWTIAITTLAHERGGSAPHARIAGELAEVLALARSRDGVTRDPRWRQRLAQSYIETEIVRFVAYKQVSDLMRTGQPGPEGSYLKLLWSETDMRMKAAAIDLEGPYALVERGDPNAIDGGRWQYEYLWSRAASIYAGTSEVQRNIIAQRVLGLPRGQ

Samples

Sample ID Description Type Environment
1 2643221683 Variovorax sp. Root473 Isolate Unclassified
2 2738541277 Variovorax sp. GV051 Isolate Unclassified
3 2738541307 Variovorax sp. GV008 Isolate Unclassified
4 2738543019 Variovorax sp. GV040 Isolate Unclassified
5 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
6 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
7 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
8 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
9 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
75 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
108 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
113 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
114 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
115 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
116 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
119 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
122 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
123 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
124 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
125 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
126 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
127 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
128 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
133 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
134 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
135 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
139 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
140 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
167 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
168 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
169 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
170 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
171 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
172 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
173 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
174 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
186 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
187 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
188 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
189 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
192 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.7
Metatranscriptomes 0.37
Isolates 2.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.93
Nodule 0
Rhizoplane 1.47
Rhizosphere 84.25
Stem 0
Stem Tuber 0
Unclassified 11.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10015087 3300003203 Unclassified 3267
2 Ga0058860_10024956 3300004801 Bacteria 3648
3 Ga0070690_100101466 3300005330 Bacteria 1908
4 Ga0070670_100000797 3300005331 Bacteria 24587
5 Ga0070670_100049998 3300005331 Bacteria 3593
6 Ga0070677_10000853 3300005333 Bacteria 10037
7 Ga0070666_10001004 3300005335 Bacteria 17255
8 Ga0070666_10021227 3300005335 Bacteria 4207
9 Ga0070666_10138068 3300005335 Bacteria 1697
10 Ga0070661_100131494 3300005344 Bacteria 1880
11 Ga0070668_100014316 3300005347 Bacteria 5927
12 Ga0070669_100026023 3300005353 Bacteria 4208
13 Ga0070669_100097897 3300005353 Bacteria 2209
14 Ga0070675_100000275 3300005354 Bacteria 34094
15 Ga0070675_100127507 3300005354 Bacteria 2166
16 Ga0070671_100030364 3300005355 Bacteria 4460
17 Ga0070674_100000585 3300005356 Bacteria 18427
18 Ga0070673_100004206 3300005364 Bacteria 9077
19 Ga0070667_100007836 3300005367 Bacteria 8860
20 Ga0070667_100040486 3300005367 Bacteria 3908
21 Ga0070667_100149498 3300005367 Bacteria 2051
22 Ga0070713_100182751 3300005436 Bacteria 1885
23 Ga0070701_10048522 3300005438 Bacteria 2191
24 Ga0070700_100034438 3300005441 Bacteria 3059
25 Ga0070708_100233015 3300005445 Bacteria 1728
26 Ga0070678_100004107 3300005456 Bacteria 8200
27 Ga0068867_100000334 3300005459 Bacteria 31176
28 Ga0068867_100024871 3300005459 Bacteria 4294
29 Ga0070707_100085615 3300005468 Bacteria 3047
30 Ga0070707_100090040 3300005468 Bacteria 2970
31 Ga0070707_100113003 3300005468 Bacteria 2635
32 Ga0070698_100070252 3300005471 Bacteria 3514
33 Ga0070699_100001353 3300005518 Bacteria 22599
34 Ga0070697_100058924 3300005536 Bacteria 3125
35 Ga0070697_100173623 3300005536 Bacteria 1825
36 Ga0070697_100173701 3300005536 Bacteria 1825
37 Ga0068853_100078641 3300005539 Bacteria 2883
38 Ga0070672_100000355 3300005543 Bacteria 26388
39 Ga0070672_100203201 3300005543 Bacteria 1657
40 Ga0070665_100002321 3300005548 Bacteria 21123
41 Ga0070704_100021916 3300005549 Bacteria 4150
42 Ga0068855_100000337 3300005563 Bacteria 58374
43 Ga0068855_100017776 3300005563 Bacteria 8548
44 Ga0068855_100055270 3300005563 Bacteria 4664
45 Ga0068855_100095180 3300005563 Bacteria 3433
46 Ga0068855_100420362 3300005563 Bacteria 1462
47 Ga0070664_100023037 3300005564 Bacteria 5139
48 Ga0068856_100433222 3300005614 Bacteria 1335
49 Ga0068852_100000843 3300005616 Bacteria 20336
50 Ga0068859_100265014 3300005617 Bacteria 1810
51 Ga0068864_100025176 3300005618 Bacteria 5010
52 Ga0068870_10013633 3300005840 Bacteria 3825
53 Ga0068863_100140156 3300005841 Bacteria 2311
54 Ga0068858_100290892 3300005842 Bacteria 1557
55 Ga0068858_100326584 3300005842 Bacteria 1467
56 Ga0068860_100013987 3300005843 Bacteria 7870
57 Ga0068862_100015961 3300005844 Bacteria 6243
58 Ga0068862_100031279 3300005844 Bacteria 4491
59 Ga0081455_10002376 3300005937 Bacteria 22485
60 Ga0081455_10006223 3300005937 Bacteria 12859
61 Ga0081538_10000105 3300005981 Bacteria 83102
62 Ga0081538_10010738 3300005981 Bacteria 7490
63 Ga0081538_10018212 3300005981 Bacteria 5288
64 Ga0081538_10065299 3300005981 Bacteria 2050
65 Ga0081539_10002359 3300005985 Bacteria 27116
66 Ga0081539_10013347 3300005985 Bacteria 6195
67 Ga0075362_10003522 3300006177 Bacteria 5492
68 Ga0068871_100058706 3300006358 Bacteria 3133
69 Ga0075428_100060337 3300006844 Bacteria 4153
70 Ga0075431_100114650 3300006847 Bacteria 2782
71 Ga0075431_100212482 3300006847 Unclassified 1976
72 Ga0075434_100243840 3300006871 Bacteria 1817
73 Ga0075434_100261876 3300006871 Bacteria 1748
74 Ga0075434_100277727 3300006871 Bacteria 1695
75 Ga0075436_100105162 3300006914 Bacteria 1968
76 Ga0097620_100265001 3300006931 Bacteria 1810
77 Ga0105240_10000320 3300009093 Bacteria 91422
78 Ga0105240_10027176 3300009093 Bacteria 7497
79 Ga0105240_10133517 3300009093 Bacteria 2974
80 Ga0111539_10110265 3300009094 Bacteria 3229
81 Ga0114129_10142881 3300009147 Bacteria 3279
82 Ga0114129_10263524 3300009147 Bacteria 2308
83 Ga0105248_10023705 3300009177 Bacteria 6820
84 Ga0105248_10244089 3300009177 Bacteria 2022
85 Ga0105237_10015484 3300009545 Bacteria 7936
86 Ga0105237_10080504 3300009545 Bacteria 3247
87 Ga0105238_10037687 3300009551 Bacteria 4914
88 Ga0105249_10031663 3300009553 Bacteria 4784
89 Ga0105246_10164380 3300011119 Bacteria 1694
90 Ga0157373_10034506 3300013100 Bacteria 3633
91 Ga0157369_10034804 3300013105 Bacteria 5525
92 Ga0157378_10027489 3300013297 Bacteria 5020
93 Ga0157378_10070191 3300013297 Bacteria 3145
94 Ga0163162_10060253 3300013306 Bacteria 3830
95 Ga0163162_10081996 3300013306 Bacteria 3297
96 Ga0157372_10071158 3300013307 Bacteria 3916
97 Ga0163163_10143476 3300014325 Bacteria 2431
98 Ga0157379_10057053 3300014968 Bacteria 3490
99 Ga0163161_10030385 3300017792 Bacteria 3845
100 Ga0163161_10031753 3300017792 Bacteria 3765
101 Ga0163161_10091833 3300017792 Bacteria 2247
102 Ga0213875_10001219 3300021388 Bacteria 17414
103 Ga0209675_1001296 3300025291 Bacteria 14851
104 Ga0209675_1004016 3300025291 Bacteria 6711
105 Ga0209025_1000049 3300025294 Bacteria 333459
106 Ga0209050_1002587 3300025298 Bacteria 15002
107 Ga0207682_10004128 3300025893 Bacteria 6154
108 Ga0207688_10013947 3300025901 Bacteria 4368
109 Ga0207680_10012626 3300025903 Bacteria 4309
110 Ga0207685_10069502 3300025905 Bacteria 1422
111 Ga0207695_10000227 3300025913 Bacteria 150546
112 Ga0207695_10015737 3300025913 Bacteria 8894
113 Ga0207671_10017969 3300025914 Bacteria 5440
114 Ga0207646_10043224 3300025922 Bacteria 4047
115 Ga0207646_10107345 3300025922 Bacteria 2505
116 Ga0207681_10020919 3300025923 Bacteria 4152
117 Ga0207681_10070892 3300025923 Bacteria 2429
118 Ga0207694_10000005 3300025924 Bacteria 823704
119 Ga0207650_10000832 3300025925 Bacteria 23614
120 Ga0207650_10001092 3300025925 Bacteria 20048
121 Ga0207659_10000184 3300025926 Bacteria 37154
122 Ga0207659_10095843 3300025926 Bacteria 2226
123 Ga0207644_10000942 3300025931 Bacteria 18539
124 Ga0207670_10064828 3300025936 Bacteria 2506
125 Ga0207669_10001477 3300025937 Bacteria 10041
126 Ga0207691_10001564 3300025940 Bacteria 22724
127 Ga0207691_10239255 3300025940 Bacteria 1570
128 Ga0207711_10215584 3300025941 Bacteria 1754
129 Ga0207667_10000011 3300025949 Bacteria 447785
130 Ga0207667_10026326 3300025949 Bacteria 6358
131 Ga0207667_10125595 3300025949 Bacteria 2643
132 Ga0207651_10000894 3300025960 Bacteria 13084
133 Ga0207668_10028711 3300025972 Bacteria 3640
134 Ga0207658_10006362 3300025986 Bacteria 8066
135 Ga0207658_10124086 3300025986 Bacteria 2064
136 Ga0207703_10358695 3300026035 Bacteria 1344
137 Ga0207678_10500159 3300026067 Bacteria 1059
138 Ga0207708_10035429 3300026075 Bacteria 3798
139 Ga0207702_10390965 3300026078 Bacteria 1339
140 Ga0207641_10102479 3300026088 Bacteria 2524
141 Ga0207648_10003880 3300026089 Bacteria 15601
142 Ga0207674_10158969 3300026116 Bacteria 2215
143 Ga0207675_100022656 3300026118 Bacteria 5846
144 Ga0207683_10012674 3300026121 Bacteria 7190
145 Ga0265354_1000107 3300028016 Bacteria 14572
146 Ga0265356_1002027 3300028017 Bacteria 2781
147 Ga0268266_10006298 3300028379 Bacteria 10878
148 Ga0268266_10347044 3300028379 Bacteria 1394
149 Ga0268265_10007226 3300028380 Bacteria 7504
150 Ga0268265_10069856 3300028380 Bacteria 2729
151 Ga0268264_10009556 3300028381 Bacteria 8031
152 Ga0268264_10040415 3300028381 Bacteria 3854
153 Ga0307517_10055302 3300028786 Bacteria 3900
154 Ga0265332_10000111 3300031238 Bacteria 69906
155 Ga0265332_10000143 3300031238 Bacteria 58100
156 Ga0265329_10005732 3300031242 Bacteria 4994
157 Ga0265329_10008540 3300031242 Bacteria 3877
158 Ga0265329_10015709 3300031242 Bacteria 2639
159 Ga0265331_10000095 3300031250 Bacteria 121876
160 Ga0265331_10000119 3300031250 Bacteria 103745
161 Ga0265316_10000063 3300031344 Bacteria 113592
162 Ga0265314_10000194 3300031711 Bacteria 90562
163 Ga0265314_10001570 3300031711 Bacteria 25115
164 Ga0265342_10001051 3300031712 Bacteria 26985
165 Ga0265342_10016668 3300031712 Bacteria 4794
166 Ga0307516_10016574 3300031730 Bacteria 7704
167 Ga0307412_10004692 3300031911 Bacteria 7626
168 Ga0373923_0022554 3300035111 Bacteria 2470
169 Ga0373953_0019433 3300035117 Bacteria 2527
170 Ga0373956_0018382 3300035119 Bacteria 2959
171 Ga0373955_0018829 3300035172 Bacteria 3442
172 Ga0373927_0051023 3300035695 Bacteria 2675
173 Ga0373927_0063715 3300035695 Bacteria 2384
174 Ga0373933_0010765 3300035724 Bacteria 5020
175 Ga0373933_0152805 3300035724 Bacteria 1462
176 Ga0373947_0063640 3300035725 Bacteria 2248
177 Ga0373937_0026048 3300036401 Bacteria 5283
178 Ga0395905_0000389 3300037471 Bacteria 62338
179 Ga0395901_0030054 3300038443 Bacteria 5597
180 Ga0436365_0061299 3300039437 Bacteria 1526
181 Ga0436365_0891944 3300039437 Bacteria 3982
182 Ga0436365_1143192 3300039437 Bacteria 1599
183 Ga0439450_001198 3300042008 Bacteria 3725
184 Ga0439451_003594 3300042009 Bacteria 3139
185 Ga0450911_000036 3300042115 Bacteria 60797
186 Ga0495651_0049906 3300046462 Bacteria 3230
187 Ga0495634_0005536 3300046642 Bacteria 9695
188 Ga0495635_0077270 3300046663 Bacteria 2281
189 Ga0495599_0041755 3300046678 Bacteria 2879
190 Ga0495613_0000737 3300046689 Bacteria 25668
191 Ga0495600_0066266 3300046809 Bacteria 2361
192 Ga0495674_0015445 3300047319 Bacteria 7136
193 Ga0496101_0008489 3300048904 Bacteria 6713
194 Ga0496104_0167050 3300048907 Bacteria 2110
195 Ga0496108_0000875 3300048911 Bacteria 23492
196 Ga0496110_0062177 3300048913 Bacteria 3297
197 Ga0496116_0030567 3300048919 Bacteria 3866
198 Ga0496117_0017871 3300048920 Bacteria 5908
199 Ga0496118_0093534 3300048921 Bacteria 2059
200 Ga0496121_0001760 3300048924 Bacteria 35275
201 Ga0496121_0117638 3300048924 Bacteria 2013
202 Ga0496122_0027531 3300048925 Bacteria 4856
203 Ga0496122_0036686 3300048925 Bacteria 3958
204 Ga0496123_0064750 3300048926 Bacteria 2328
205 Ga0496123_0084614 3300048926 Bacteria 1912
206 Ga0496124_0000459 3300048927 Bacteria 70625
207 Ga0496124_0004162 3300048927 Bacteria 17072
208 Ga0496124_0042730 3300048927 Bacteria 3900
209 Ga0496124_0160871 3300048927 Bacteria 1750
210 Ga0496125_0002846 3300048928 Bacteria 21782
211 Ga0496125_0022268 3300048928 Bacteria 5889
212 Ga0496126_0009245 3300048929 Bacteria 10506
213 Ga0496126_0123423 3300048929 Bacteria 2243
214 Ga0496126_0124146 3300048929 Bacteria 2236
215 Ga0501031_0035314 3300049568 Bacteria 3261
216 Ga0501032_0000642 3300049569 Bacteria 28381
217 Ga0501033_0028480 3300049570 Bacteria 4196
218 Ga0501036_0081741 3300049572 Bacteria 2730
219 Ga0501037_0113696 3300049573 Bacteria 1949
220 Ga0501040_0123666 3300049576 Bacteria 1816
221 Ga0501041_0004539 3300049577 Bacteria 8053
222 Ga0501042_0062311 3300049578 Bacteria 2664
223 Ga0501043_0023991 3300049579 Bacteria 4786
224 Ga0501043_0099481 3300049579 Bacteria 2286
225 Ga0501046_0085932 3300049580 Bacteria 2425
226 Ga0501048_0056007 3300049582 Bacteria 2798
227 Ga0501068_0004131 3300049584 Bacteria 7871
228 Ga0501070_0023271 3300049586 Bacteria 5189
229 Ga0501071_0055815 3300049587 Bacteria 2852
230 Ga0501072_0005650 3300049588 Bacteria 9523
231 Ga0501072_0073969 3300049588 Bacteria 2694
232 Ga0501073_0000005 3300049589 Bacteria 237180
233 Ga0501075_0001794 3300049591 Bacteria 14129
234 Ga0501076_0068113 3300049592 Bacteria 2843
235 Ga0501076_0087503 3300049592 Bacteria 2504
236 Ga0501077_0000039 3300049593 Bacteria 65680
237 Ga0501079_0007851 3300049741 Bacteria 8081
238 Ga0501079_0064876 3300049741 Bacteria 2817
239 Ga0501080_0006678 3300049742 Bacteria 10383
240 Ga0501081_0062224 3300049743 Bacteria 2588
241 Ga0501044_0034377 3300049823 Bacteria 5316
242 Ga0501045_0031236 3300049824 Bacteria 3857
243 nmdc:mga03683_3250_c1 3300050489 Bacteria 5208
244 nmdc:mga05p37_58202_c1 3300050507 Bacteria 4759
245 nmdc:mga0qj67_146240_c1 3300050509 Bacteria 1916
246 nmdc:mga06r32_204679_c1 3300050510 Bacteria 1961
247 nmdc:mga0n895_115738_c1 3300050512 Bacteria 2699
248 nmdc:mga0n895_194530_c1 3300050512 Bacteria 2059
249 nmdc:mga0n895_224187_c1 3300050512 Bacteria 1908
250 nmdc:mga0n895_226893_c1 3300050512 Bacteria 1896
251 nmdc:mga0n895_43578_c1 3300050512 Bacteria 4373
252 nmdc:mga0n895_48622_c1 3300050512 Bacteria 4152
253 nmdc:mga0a205_143044_c1 3300050515 Bacteria 2292
254 nmdc:mga0a205_245198_c1 3300050515 Bacteria 1672
255 Ga0495601_0006985 3300053077 Bacteria 6612
256 Ga0495612_0025074 3300053078 Bacteria 2395
257 Ga0495619_0046401 3300053085 Bacteria 2856
258 Ga0495619_0116179 3300053085 Bacteria 1832
259 Ga0500608_059256 3300053122 Bacteria 1832
260 Ga0500596_005647 3300053735 Bacteria 2179
261 Ga0501084_0079861 3300054114 Bacteria 2742
262 Ga0501082_0056531 3300060353 Bacteria 3380
263 Ga0501082_0070518 3300060353 Bacteria 3009
264 Ga0530510_0040050 3300061734 Bacteria 3381
265 Ga0530510_0042755 3300061734 Bacteria 3273

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046809 Ga0495600_0066266 Ga0495600_0066266_1355_2335 311
2 3300039437 Ga0436365_0061299 Ga0436365_0061299_33_1025 313
3 3300050510 nmdc:mga06r32_204679_c1 nmdc:mga06r32_204679_c1_17_988 321
4 3300026067 Ga0207678_10500159 Ga0207678_105001591 323
5 3300025291 Ga0209675_1004016 Ga0209675_10040162 348
6 3300025298 Ga0209050_1002587 Ga0209050_10025874 348
7 3300048919 Ga0496116_0030567 Ga0496116_0030567_385_1557 348
8 3300048920 Ga0496117_0017871 Ga0496117_0017871_2392_3564 348
9 3300048924 Ga0496121_0117638 Ga0496121_0117638_450_1622 348
10 3300048925 Ga0496122_0036686 Ga0496122_0036686_2180_3352 348
11 3300048926 Ga0496123_0064750 Ga0496123_0064750_928_2100 348
12 3300005331 Ga0070670_100049998 Ga0070670_1000499984 350
13 3300005354 Ga0070675_100127507 Ga0070675_1001275072 350
14 3300005543 Ga0070672_100203201 Ga0070672_1002032012 350
15 3300014325 Ga0163163_10143476 Ga0163163_101434762 350
16 3300017792 Ga0163161_10091833 Ga0163161_100918332 350
17 3300025925 Ga0207650_10001092 Ga0207650_100010923 350
18 3300025926 Ga0207659_10095843 Ga0207659_100958432 350
19 3300025940 Ga0207691_10239255 Ga0207691_102392552 350
20 3300025941 Ga0207711_10215584 Ga0207711_102155842 350
21 3300031911 Ga0307412_10004692 Ga0307412_100046925 356
22 3300049586 Ga0501070_0023271 Ga0501070_0023271_4006_5142 359
23 3300005563 Ga0068855_100095180 Ga0068855_1000951802 360
24 3300005614 Ga0068856_100433222 Ga0068856_1004332222 360
25 3300025949 Ga0207667_10125595 Ga0207667_101255952 360
26 3300026078 Ga0207702_10390965 Ga0207702_103909652 360
27 3300047319 Ga0495674_0015445 Ga0495674_0015445_4662_5891 360
28 3300005436 Ga0070713_100182751 Ga0070713_1001827512 361
29 3300005563 Ga0068855_100420362 Ga0068855_1004203622 361
30 3300048907 Ga0496104_0167050 Ga0496104_0167050_306_1442 361
31 3300048913 Ga0496110_0062177 Ga0496110_0062177_1213_2349 361
32 3300048929 Ga0496126_0124146 Ga0496126_0124146_736_1872 361
33 iso_pu_bacteria 2643221683 2644464351 361
34 3300005353 Ga0070669_100097897 Ga0070669_1000978972 362
35 3300025923 Ga0207681_10070892 Ga0207681_100708922 362
36 3300028379 Ga0268266_10347044 Ga0268266_103470441 362
37 3300048911 Ga0496108_0000875 Ga0496108_0000875_15977_17173 362
38 3300048927 Ga0496124_0042730 Ga0496124_0042730_1397_2593 362
39 3300048928 Ga0496125_0022268 Ga0496125_0022268_2610_3806 362
40 3300048929 Ga0496126_0009245 Ga0496126_0009245_8449_9645 362
41 3300005331 Ga0070670_100000797 Ga0070670_10000079710 365
42 3300005333 Ga0070677_10000853 Ga0070677_1000085310 365
43 3300005344 Ga0070661_100131494 Ga0070661_1001314942 365
44 3300005353 Ga0070669_100026023 Ga0070669_1000260232 365
45 3300005354 Ga0070675_100000275 Ga0070675_10000027520 365
46 3300005355 Ga0070671_100030364 Ga0070671_1000303642 365
47 3300005356 Ga0070674_100000585 Ga0070674_10000058511 365
48 3300005364 Ga0070673_100004206 Ga0070673_1000042062 365
49 3300005367 Ga0070667_100007836 Ga0070667_1000078364 365
50 3300005456 Ga0070678_100004107 Ga0070678_1000041074 365
51 3300005459 Ga0068867_100000334 Ga0068867_10000033417 365
52 3300005543 Ga0070672_100000355 Ga0070672_10000035516 365
53 3300005564 Ga0070664_100023037 Ga0070664_1000230372 365
54 3300005618 Ga0068864_100025176 Ga0068864_1000251762 365
55 3300005840 Ga0068870_10013633 Ga0068870_100136332 365
56 3300005841 Ga0068863_100140156 Ga0068863_1001401562 365
57 3300006177 Ga0075362_10003522 Ga0075362_100035223 365
58 3300006358 Ga0068871_100058706 Ga0068871_1000587064 365
59 3300009177 Ga0105248_10244089 Ga0105248_102440892 365
60 3300013297 Ga0157378_10070191 Ga0157378_100701913 365
61 3300013306 Ga0163162_10081996 Ga0163162_100819964 365
62 3300017792 Ga0163161_10030385 Ga0163161_100303852 365
63 3300025893 Ga0207682_10004128 Ga0207682_100041284 365
64 3300025923 Ga0207681_10020919 Ga0207681_100209194 365
65 3300025925 Ga0207650_10000832 Ga0207650_100008329 365
66 3300025926 Ga0207659_10000184 Ga0207659_1000018417 365
67 3300025931 Ga0207644_10000942 Ga0207644_1000094211 365
68 3300025937 Ga0207669_10001477 Ga0207669_100014778 365
69 3300025940 Ga0207691_10001564 Ga0207691_1000156421 365
70 3300025960 Ga0207651_10000894 Ga0207651_100008948 365
71 3300025986 Ga0207658_10006362 Ga0207658_100063623 365
72 3300026088 Ga0207641_10102479 Ga0207641_101024792 365
73 3300026089 Ga0207648_10003880 Ga0207648_100038805 365
74 3300026121 Ga0207683_10012674 Ga0207683_100126742 365
75 3300037471 Ga0395905_0000389 Ga0395905_0000389_57350_58510 365
76 3300042115 Ga0450911_000036 Ga0450911_000036_59259_60419 365
77 3300048927 Ga0496124_0160871 Ga0496124_0160871_288_1448 365
78 3300048929 Ga0496126_0123423 Ga0496126_0123423_306_1466 365
79 3300050489 nmdc:mga03683_3250_c1 nmdc:mga03683_3250_c1_1123_2283 365
80 iso_pu_bacteria 2738541307 2738883778 365
81 iso_pu_bacteria 2904541872 2904542227 365
82 iso_pu_bacteria 2929160207 2929167512 365
83 3300039437 Ga0436365_1143192 Ga0436365_1143192_302_1465 367
84 iso_pu_bacteria 2738541277 2738722317 367
85 iso_pu_bacteria 2738543019 2739282681 367
86 3300005335 Ga0070666_10021227 Ga0070666_100212272 368
87 3300005842 Ga0068858_100290892 Ga0068858_1002908922 368
88 3300009177 Ga0105248_10023705 Ga0105248_100237052 368
89 3300005539 Ga0068853_100078641 Ga0068853_1000786412 369
90 3300005563 Ga0068855_100055270 Ga0068855_1000552703 369
91 3300009093 Ga0105240_10133517 Ga0105240_101335172 369
92 3300009545 Ga0105237_10080504 Ga0105237_100805043 369
93 3300013100 Ga0157373_10034506 Ga0157373_100345063 369
94 3300013105 Ga0157369_10034804 Ga0157369_100348042 369
95 3300025294 Ga0209025_1000049 Ga0209025_100004977 369
96 3300025914 Ga0207671_10017969 Ga0207671_100179692 369
97 3300026116 Ga0207674_10158969 Ga0207674_101589692 369
98 3300048921 Ga0496118_0093534 Ga0496118_0093534_828_2000 369
99 3300048925 Ga0496122_0027531 Ga0496122_0027531_2479_3651 369
100 3300048926 Ga0496123_0084614 Ga0496123_0084614_182_1354 369
101 3300048927 Ga0496124_0004162 Ga0496124_0004162_2268_3440 369
102 3300013297 Ga0157378_10027489 Ga0157378_100274893 370
103 3300028017 Ga0265356_1002027 Ga0265356_10020273 370
104 3300005563 Ga0068855_100000337 Ga0068855_10000033723 371
105 3300005616 Ga0068852_100000843 Ga0068852_10000084318 371
106 3300009093 Ga0105240_10000320 Ga0105240_1000032055 371
107 3300009551 Ga0105238_10037687 Ga0105238_100376874 371
108 3300025913 Ga0207695_10000227 Ga0207695_10000227112 371
109 3300025924 Ga0207694_10000005 Ga0207694_10000005554 371
110 3300025949 Ga0207667_10000011 Ga0207667_1000001138 371
111 3300031730 Ga0307516_10016574 Ga0307516_100165744 371
112 3300048904 Ga0496101_0008489 Ga0496101_0008489_4830_6011 371
113 3300028016 Ga0265354_1000107 Ga0265354_10001073 372
114 3300048924 Ga0496121_0001760 Ga0496121_0001760_2745_3941 372
115 3300048927 Ga0496124_0000459 Ga0496124_0000459_8740_9936 372
116 3300048928 Ga0496125_0002846 Ga0496125_0002846_2506_3702 372
117 3300038443 Ga0395901_0030054 Ga0395901_0030054_87_1265 373
118 3300046462 Ga0495651_0049906 Ga0495651_0049906_1840_3051 373
119 3300049569 Ga0501032_0000642 Ga0501032_0000642_1711_2892 373
120 3300049579 Ga0501043_0099481 Ga0501043_0099481_566_1747 373
121 3300049584 Ga0501068_0004131 Ga0501068_0004131_6027_7208 373
122 3300049589 Ga0501073_0000005 Ga0501073_0000005_209999_211180 373
123 3300049593 Ga0501077_0000039 Ga0501077_0000039_39490_40671 373
124 3300049742 Ga0501080_0006678 Ga0501080_0006678_2948_4129 373
125 3300049823 Ga0501044_0034377 Ga0501044_0034377_2946_4127 373
126 iso_pu_bacteria 2894772417 2894772935 373
127 3300005335 Ga0070666_10001004 Ga0070666_100010044 374
128 3300005367 Ga0070667_100040486 Ga0070667_1000404862 374
129 3300006871 Ga0075434_100243840 Ga0075434_1002438402 374
130 3300025903 Ga0207680_10012626 Ga0207680_100126265 374
131 3300025986 Ga0207658_10124086 Ga0207658_101240862 374
132 3300039437 Ga0436365_0891944 Ga0436365_0891944_554_1765 374
133 3300050512 nmdc:mga0n895_226893_c1 nmdc:mga0n895_226893_c1_111_1241 374
134 3300053122 Ga0500608_059256 Ga0500608_059256_324_1514 374
135 3300053735 Ga0500596_005647 Ga0500596_005647_215_1405 374
136 iso_pu_bacteria 2915358134 2915365096 374
137 3300005335 Ga0070666_10138068 Ga0070666_101380682 375
138 3300005548 Ga0070665_100002321 Ga0070665_10000232111 375
139 3300005563 Ga0068855_100017776 Ga0068855_1000177763 375
140 3300009093 Ga0105240_10027176 Ga0105240_100271762 375
141 3300009545 Ga0105237_10015484 Ga0105237_100154843 375
142 3300013307 Ga0157372_10071158 Ga0157372_100711582 375
143 3300025913 Ga0207695_10015737 Ga0207695_100157377 375
144 3300025949 Ga0207667_10026326 Ga0207667_100263264 375
145 3300028379 Ga0268266_10006298 Ga0268266_100062986 375
146 3300028786 Ga0307517_10055302 Ga0307517_100553024 375
147 3300050515 nmdc:mga0a205_245198_c1 nmdc:mga0a205_245198_c1_151_1284 375
148 3300005347 Ga0070668_100014316 Ga0070668_1000143163 376
149 3300005617 Ga0068859_100265014 Ga0068859_1002650142 376
150 3300005843 Ga0068860_100013987 Ga0068860_1000139873 376
151 3300005844 Ga0068862_100015961 Ga0068862_1000159615 376
152 3300006931 Ga0097620_100265001 Ga0097620_1002650012 376
153 3300025291 Ga0209675_1001296 Ga0209675_100129611 376
154 3300025972 Ga0207668_10028711 Ga0207668_100287112 376
155 3300028380 Ga0268265_10007226 Ga0268265_100072266 376
156 3300028380 Ga0268265_10069856 Ga0268265_100698561 376
157 3300028381 Ga0268264_10009556 Ga0268264_100095566 376
158 3300021388 Ga0213875_10001219 Ga0213875_100012192 377
159 3300046663 Ga0495635_0077270 Ga0495635_0077270_361_1563 377
160 3300046678 Ga0495599_0041755 Ga0495599_0041755_1169_2371 377
161 3300053077 Ga0495601_0006985 Ga0495601_0006985_491_1693 377
162 3300053085 Ga0495619_0046401 Ga0495619_0046401_1030_2232 377
163 3300028381 Ga0268264_10040415 Ga0268264_100404153 378
164 3300005445 Ga0070708_100233015 Ga0070708_1002330151 380
165 3300005518 Ga0070699_100001353 Ga0070699_10000135311 380
166 3300053085 Ga0495619_0116179 Ga0495619_0116179_275_1432 382
167 3300025905 Ga0207685_10069502 Ga0207685_100695022 383
168 3300035111 Ga0373923_0022554 Ga0373923_0022554_923_2083 383
169 3300035117 Ga0373953_0019433 Ga0373953_0019433_914_2074 383
170 3300035119 Ga0373956_0018382 Ga0373956_0018382_791_1951 383
171 3300035724 Ga0373933_0010765 Ga0373933_0010765_1187_2347 383
172 3300053078 Ga0495612_0025074 Ga0495612_0025074_673_1833 383
173 3300005981 Ga0081538_10065299 Ga0081538_100652992 384
174 3300005549 Ga0070704_100021916 Ga0070704_1000219161 385
175 3300006871 Ga0075434_100277727 Ga0075434_1002777271 385
176 3300050512 nmdc:mga0n895_224187_c1 nmdc:mga0n895_224187_c1_270_1499 385
177 3300050512 nmdc:mga0n895_43578_c1 nmdc:mga0n895_43578_c1_485_1714 385
178 3300050515 nmdc:mga0a205_143044_c1 nmdc:mga0a205_143044_c1_736_1965 385
179 3300005468 Ga0070707_100090040 Ga0070707_1000900402 386
180 3300025922 Ga0207646_10043224 Ga0207646_100432242 386
181 3300005367 Ga0070667_100149498 Ga0070667_1001494982 387
182 3300005459 Ga0068867_100024871 Ga0068867_1000248714 387
183 3300046642 Ga0495634_0005536 Ga0495634_0005536_7626_8804 388
184 3300046689 Ga0495613_0000737 Ga0495613_0000737_17647_18825 388
185 3300005536 Ga0070697_100173623 Ga0070697_1001736232 389
186 3300005981 Ga0081538_10010738 Ga0081538_100107386 389
187 3300006871 Ga0075434_100261876 Ga0075434_1002618762 389
188 3300006914 Ga0075436_100105162 Ga0075436_1001051623 389
189 3300050512 nmdc:mga0n895_194530_c1 nmdc:mga0n895_194530_c1_371_1585 389
190 3300005468 Ga0070707_100113003 Ga0070707_1001130032 390
191 3300005536 Ga0070697_100058924 Ga0070697_1000589244 390
192 3300005937 Ga0081455_10002376 Ga0081455_1000237621 390
193 3300005937 Ga0081455_10006223 Ga0081455_100062237 390
194 3300005981 Ga0081538_10000105 Ga0081538_1000010530 390
195 3300005981 Ga0081538_10018212 Ga0081538_100182123 390
196 3300005985 Ga0081539_10013347 Ga0081539_100133473 390
197 3300006844 Ga0075428_100060337 Ga0075428_1000603373 390
198 3300009147 Ga0114129_10263524 Ga0114129_102635243 390
199 3300035172 Ga0373955_0018829 Ga0373955_0018829_1017_2279 390
200 3300035695 Ga0373927_0051023 Ga0373927_0051023_418_1680 390
201 3300035724 Ga0373933_0152805 Ga0373933_0152805_201_1382 390
202 3300035725 Ga0373947_0063640 Ga0373947_0063640_511_1773 390
203 3300042008 Ga0439450_001198 Ga0439450_001198_427_1620 390
204 3300042009 Ga0439451_003594 Ga0439451_003594_1897_3090 390
205 3300049568 Ga0501031_0035314 Ga0501031_0035314_984_2174 390
206 3300049570 Ga0501033_0028480 Ga0501033_0028480_1662_2885 390
207 3300049572 Ga0501036_0081741 Ga0501036_0081741_1313_2536 390
208 3300049573 Ga0501037_0113696 Ga0501037_0113696_14_1237 390
209 3300049576 Ga0501040_0123666 Ga0501040_0123666_409_1602 390
210 3300049577 Ga0501041_0004539 Ga0501041_0004539_1917_3140 390
211 3300049578 Ga0501042_0062311 Ga0501042_0062311_383_1606 390
212 3300049579 Ga0501043_0023991 Ga0501043_0023991_1382_2605 390
213 3300049580 Ga0501046_0085932 Ga0501046_0085932_851_2074 390
214 3300049582 Ga0501048_0056007 Ga0501048_0056007_524_1747 390
215 3300049587 Ga0501071_0055815 Ga0501071_0055815_526_1749 390
216 3300049588 Ga0501072_0005650 Ga0501072_0005650_489_1712 390
217 3300049588 Ga0501072_0073969 Ga0501072_0073969_633_1823 390
218 3300049591 Ga0501075_0001794 Ga0501075_0001794_8496_9719 390
219 3300049592 Ga0501076_0068113 Ga0501076_0068113_1118_2308 390
220 3300049592 Ga0501076_0087503 Ga0501076_0087503_451_1674 390
221 3300049741 Ga0501079_0007851 Ga0501079_0007851_1302_2525 390
222 3300049741 Ga0501079_0064876 Ga0501079_0064876_355_1545 390
223 3300049743 Ga0501081_0062224 Ga0501081_0062224_831_2054 390
224 3300049824 Ga0501045_0031236 Ga0501045_0031236_1957_3180 390
225 3300054114 Ga0501084_0079861 Ga0501084_0079861_816_2039 390
226 3300060353 Ga0501082_0056531 Ga0501082_0056531_1140_2363 390
227 3300060353 Ga0501082_0070518 Ga0501082_0070518_1200_2390 390
228 3300061734 Ga0530510_0040050 Ga0530510_0040050_1327_2550 390
229 3300061734 Ga0530510_0042755 Ga0530510_0042755_1199_2389 390
230 3300005468 Ga0070707_100085615 Ga0070707_1000856153 393
231 3300005536 Ga0070697_100173701 Ga0070697_1001737011 393
232 3300006847 Ga0075431_100212482 Ga0075431_1002124822 393
233 3300025922 Ga0207646_10107345 Ga0207646_101073452 393
234 3300031238 Ga0265332_10000111 Ga0265332_1000011139 393
235 3300031238 Ga0265332_10000143 Ga0265332_1000014320 393
236 3300031242 Ga0265329_10005732 Ga0265329_100057325 393
237 3300031242 Ga0265329_10015709 Ga0265329_100157092 393
238 3300031250 Ga0265331_10000095 Ga0265331_1000009577 393
239 3300031250 Ga0265331_10000119 Ga0265331_1000011938 393
240 3300031344 Ga0265316_10000063 Ga0265316_1000006371 393
241 3300031711 Ga0265314_10000194 Ga0265314_1000019438 393
242 3300031711 Ga0265314_10001570 Ga0265314_1000157014 393
243 3300031712 Ga0265342_10001051 Ga0265342_1000105118 393
244 3300031712 Ga0265342_10016668 Ga0265342_100166682 393
245 3300050512 nmdc:mga0n895_115738_c1 nmdc:mga0n895_115738_c1_475_1659 393
246 3300005842 Ga0068858_100326584 Ga0068858_1003265842 394
247 3300006847 Ga0075431_100114650 Ga0075431_1001146502 394
248 3300026035 Ga0207703_10358695 Ga0207703_103586951 394
249 3300035695 Ga0373927_0063715 Ga0373927_0063715_846_2036 394
250 3300036401 Ga0373937_0026048 Ga0373937_0026048_2147_3337 394
251 3300050509 nmdc:mga0qj67_146240_c1 nmdc:mga0qj67_146240_c1_595_1782 394
252 3300003203 JGI25406J46586_10015087 JGI25406J46586_100150872 395
253 3300004801 Ga0058860_10024956 Ga0058860_100249563 395
254 3300005330 Ga0070690_100101466 Ga0070690_1001014662 395
255 3300005438 Ga0070701_10048522 Ga0070701_100485222 395
256 3300005441 Ga0070700_100034438 Ga0070700_1000344383 395
257 3300005471 Ga0070698_100070252 Ga0070698_1000702521 395
258 3300005844 Ga0068862_100031279 Ga0068862_1000312794 395
259 3300005985 Ga0081539_10002359 Ga0081539_100023592 395
260 3300009094 Ga0111539_10110265 Ga0111539_101102652 395
261 3300009147 Ga0114129_10142881 Ga0114129_101428812 395
262 3300009553 Ga0105249_10031663 Ga0105249_100316634 395
263 3300011119 Ga0105246_10164380 Ga0105246_101643802 395
264 3300013306 Ga0163162_10060253 Ga0163162_100602532 395
265 3300014968 Ga0157379_10057053 Ga0157379_100570531 395
266 3300017792 Ga0163161_10031753 Ga0163161_100317533 395
267 3300025901 Ga0207688_10013947 Ga0207688_100139472 395
268 3300025936 Ga0207670_10064828 Ga0207670_100648281 395
269 3300026075 Ga0207708_10035429 Ga0207708_100354293 395
270 3300026118 Ga0207675_100022656 Ga0207675_1000226562 395
271 3300031242 Ga0265329_10008540 Ga0265329_100085404 395
272 3300050507 nmdc:mga05p37_58202_c1 nmdc:mga05p37_58202_c1_1451_2638 395
273 3300050512 nmdc:mga0n895_48622_c1 nmdc:mga0n895_48622_c1_1569_2756 395

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

263

414

0.96

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

157

251

0.93

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

33

153

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.885 8 394
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8829 1 394
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8808 1 394
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.8766 8 394
8hk0-assembly1.cif.gz_A crystal structure of fic32-33 complex from streptomyces ficellus nrrl 8067 0.8752 1 385
ID Description Score Start End Superfamily
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9886 128 237 2.40.110.10
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9711 128 237 2.40.110.10
af_M0RAD8_170_241_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9553 125 194 2.40.110.10
4x28B02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9461 125 232 2.40.110.10
5iduB02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9438 128 242 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9882 143 246 GO:0005886
GO:0016627
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9788 143 246 GO:0005886
GO:0016627
AF-A0A351EJS1-F1-model_v4 Acyl-CoA dehydrogenase 0.9772 131 220 GO:0005886
GO:0016627
AF-A0A355SPG1-F1-model_v4 deleted 0.9764 119 223
AF-A0A2V9JTB2-F1-model_v4 Acyl-CoA oxidase/dehydrogenase middle domain-containing protein 0.9706 141 248 GO:0005886
GO:0016627

Feature Viewer

pLDDT pTM Quality
87.98 0.85 High
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Predicted Structure (AlphaFold2)

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