F378308

General Info

Members Datasets Scaffolds Average Seq Length
272 205 544 327

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10010811|Ga0105240_100108116
Length 347
Sequence MKPVRLSSATGLATSANEANLTRPKVFAAHVLFDEPRRRLAEQFDVEYWNGSDRPPRAEVLHRVAGKDAIISLLTEKVDEELLDAAGPKLRIVANVAVGYDNIDVRACTERGIVVTNTPGVLDETTADFTWTLLMAVARRLIEADHLARSGEWSQWNLDQLCGTDVWGKTLGIIGFGRIGRAVARRASGFRMRVIYHSSTRAPEEVENELHAEYKTRDEVLQQADFLSLHVPLREETRGLIGAAELARMKRTAFLINTTRGPVVQEAALVHALQEGRIAGAALDVFEREPLISDGLRRNNVVLAPHLGSASIETRTRMAMIAAENVSAFFQDKRPPTMLNPEVWQQK

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
73 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
113 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
114 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
115 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
116 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
118 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
119 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
120 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
121 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
122 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
123 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
124 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
125 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
126 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
127 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
128 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
129 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
130 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
131 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
132 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
133 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
134 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
135 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
136 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
137 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
138 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
139 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
140 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
141 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
142 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
143 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
144 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
145 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
146 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
147 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
148 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
149 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
150 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
151 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
152 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
153 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
154 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
155 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
156 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
157 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
158 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
159 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
160 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
161 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
162 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
163 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
164 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
165 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
166 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
167 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
168 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
169 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
170 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
171 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
172 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
173 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
174 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
175 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
176 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
177 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
178 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
179 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
180 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
181 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
182 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
183 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
184 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
185 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
186 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
187 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
188 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
189 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
190 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
191 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
192 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
193 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
194 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
195 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
198 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
199 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
200 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
201 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
202 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
203 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
204 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
205 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.9
Metatranscriptomes 0.74
Isolates 0.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 2.57
Rhizosphere 92.65
Stem 0
Stem Tuber 0
Unclassified 6.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10010811 3300009093 Bacteria 12784
2 JGI25162J39368_1000052 3300002737 Bacteria 152144
3 Ga0070658_10003387 3300005327 Bacteria 13128
4 Ga0070676_10027306 3300005328 Bacteria 3236
5 Ga0070683_100124522 3300005329 Bacteria 2436
6 Ga0070670_100006617 3300005331 Bacteria 9822
7 Ga0068869_100000093 3300005334 Bacteria 41543
8 Ga0070666_10000007 3300005335 Bacteria 293732
9 Ga0070680_100002134 3300005336 Bacteria 14624
10 Ga0068868_100016801 3300005338 Bacteria 5443
11 Ga0070660_100004110 3300005339 Bacteria 10041
12 Ga0070661_100000335 3300005344 Bacteria 37722
13 Ga0070661_100008179 3300005344 Bacteria 7217
14 Ga0070675_100167186 3300005354 Bacteria 1895
15 Ga0070673_100243860 3300005364 Bacteria 1563
16 Ga0070659_100000472 3300005366 Bacteria 29602
17 Ga0070667_100307515 3300005367 Bacteria 1428
18 Ga0070703_10035824 3300005406 Bacteria 1521
19 Ga0070709_10122746 3300005434 Bacteria 1763
20 Ga0070709_10205621 3300005434 Bacteria 1397
21 Ga0070713_100052944 3300005436 Bacteria 3362
22 Ga0070713_100195347 3300005436 Bacteria 1825
23 Ga0070701_10031629 3300005438 Bacteria 2627
24 Ga0070694_100009967 3300005444 Bacteria 5840
25 Ga0070694_100170414 3300005444 Bacteria 1603
26 Ga0070708_100017471 3300005445 Bacteria 5986
27 Ga0070663_100003714 3300005455 Bacteria 8850
28 Ga0070662_100073631 3300005457 Bacteria 2524
29 Ga0068867_100011150 3300005459 Bacteria 6340
30 Ga0070706_100061881 3300005467 Bacteria 3457
31 Ga0070707_100000274 3300005468 Bacteria 50831
32 Ga0070707_100002770 3300005468 Bacteria 16694
33 Ga0070698_100102716 3300005471 Bacteria 2829
34 Ga0070699_100016652 3300005518 Bacteria 6309
35 Ga0070699_100140162 3300005518 Bacteria 2135
36 Ga0070679_100000446 3300005530 Bacteria 35016
37 Ga0070684_100069067 3300005535 Bacteria 3107
38 Ga0070697_100092423 3300005536 Bacteria 2503
39 Ga0070697_100264201 3300005536 Bacteria 1474
40 Ga0068853_100003799 3300005539 Bacteria 11579
41 Ga0070672_100015028 3300005543 Bacteria 5500
42 Ga0070695_100006034 3300005545 Bacteria 7155
43 Ga0070696_100000511 3300005546 Bacteria 24561
44 Ga0070693_100000013 3300005547 Bacteria 69826
45 Ga0070665_100000817 3300005548 Bacteria 40729
46 Ga0070704_100003348 3300005549 Bacteria 9177
47 Ga0070664_100003715 3300005564 Bacteria 12296
48 Ga0068857_100025327 3300005577 Bacteria 5224
49 Ga0068854_100000270 3300005578 Bacteria 35278
50 Ga0068856_100194300 3300005614 Bacteria 2043
51 Ga0070702_100025344 3300005615 Bacteria 3177
52 Ga0068859_100034083 3300005617 Bacteria 5111
53 Ga0068870_10050759 3300005840 Bacteria 2193
54 Ga0068860_100001994 3300005843 Bacteria 21528
55 Ga0068860_100200643 3300005843 Bacteria 1933
56 Ga0068862_100121293 3300005844 Bacteria 2304
57 Ga0068871_100138266 3300006358 Bacteria 2070
58 Ga0075428_100257418 3300006844 Bacteria 1880
59 Ga0075431_100030253 3300006847 Bacteria 5577
60 Ga0075433_10035495 3300006852 Bacteria 4288
61 Ga0075434_100142387 3300006871 Bacteria 2418
62 Ga0075434_100209579 3300006871 Bacteria 1969
63 Ga0075436_100008387 3300006914 Bacteria 7067
64 Ga0075436_100165542 3300006914 Bacteria 1560
65 Ga0097620_100034085 3300006931 Bacteria 5111
66 Ga0099794_10022899 3300007265 Bacteria 2852
67 Ga0105240_10048843 3300009093 Bacteria 5346
68 Ga0105245_10087759 3300009098 Bacteria 2856
69 Ga0114129_10065999 3300009147 Bacteria 5048
70 Ga0114129_10090281 3300009147 Bacteria 4247
71 Ga0105243_10041325 3300009148 Bacteria 3606
72 Ga0105241_10000138 3300009174 Bacteria 51905
73 Ga0105238_10001931 3300009551 Bacteria 20819
74 Ga0099796_10058610 3300010159 Bacteria 1358
75 Ga0157373_10001849 3300013100 Bacteria 16063
76 Ga0157370_10171208 3300013104 Bacteria 2018
77 Ga0157378_10003755 3300013297 Bacteria 13462
78 Ga0163162_10000552 3300013306 Bacteria 34607
79 Ga0157372_10003723 3300013307 Bacteria 16380
80 Ga0157372_10092123 3300013307 Bacteria 3447
81 Ga0157375_10111471 3300013308 Bacteria 2835
82 Ga0163163_10100301 3300014325 Bacteria 2918
83 Ga0163163_10149815 3300014325 Bacteria 2377
84 Ga0163163_10219181 3300014325 Bacteria 1951
85 Ga0163161_10093973 3300017792 Bacteria 2222
86 Ga0213876_10124510 3300021384 Bacteria 1369
87 Ga0228598_1001699 3300024227 Bacteria 4816
88 Ga0228598_1008079 3300024227 Bacteria 2132
89 Ga0207653_10002326 3300025885 Bacteria 6060
90 Ga0207688_10005041 3300025901 Bacteria 7183
91 Ga0207680_10000002 3300025903 Bacteria 1018646
92 Ga0207699_10013576 3300025906 Bacteria 4175
93 Ga0207699_10156154 3300025906 Bacteria 1514
94 Ga0207645_10001613 3300025907 Bacteria 18386
95 Ga0207643_10000604 3300025908 Bacteria 22724
96 Ga0207705_10022154 3300025909 Bacteria 4533
97 Ga0207684_10101139 3300025910 Bacteria 2464
98 Ga0207654_10008793 3300025911 Bacteria 5123
99 Ga0207707_10000019 3300025912 Bacteria 206008
100 Ga0207695_10091901 3300025913 Bacteria 3047
101 Ga0207660_10000116 3300025917 Bacteria 46143
102 Ga0207657_10000225 3300025919 Bacteria 59059
103 Ga0207652_10009597 3300025921 Bacteria 7783
104 Ga0207646_10000005 3300025922 Bacteria 523896
105 Ga0207646_10000016 3300025922 Bacteria 337048
106 Ga0207694_10000177 3300025924 Bacteria 65875
107 Ga0207659_10142363 3300025926 Bacteria 1863
108 Ga0207700_10050614 3300025928 Bacteria 3096
109 Ga0207690_10002032 3300025932 Bacteria 12408
110 Ga0207706_10002826 3300025933 Bacteria 16842
111 Ga0207709_10136802 3300025935 Bacteria 1678
112 Ga0207670_10013821 3300025936 Bacteria 4775
113 Ga0207704_10025217 3300025938 Bacteria 3241
114 Ga0207665_10020001 3300025939 Unclassified 4398
115 Ga0207665_10241052 3300025939 Bacteria 1332
116 Ga0207689_10000816 3300025942 Bacteria 30009
117 Ga0207679_10000431 3300025945 Bacteria 29828
118 Ga0207667_10003191 3300025949 Bacteria 20258
119 Ga0207640_10002553 3300025981 Bacteria 9757
120 Ga0207658_10476680 3300025986 Bacteria 1108
121 Ga0207677_10013581 3300026023 Bacteria 4726
122 Ga0207639_10153498 3300026041 Bacteria 1931
123 Ga0207678_10000422 3300026067 Bacteria 38419
124 Ga0207702_10000281 3300026078 Bacteria 58807
125 Ga0207648_10001633 3300026089 Bacteria 24565
126 Ga0207674_10000193 3300026116 Bacteria 75241
127 Ga0207675_100061223 3300026118 Bacteria 3514
128 Ga0265354_1003980 3300028016 Bacteria 1593
129 Ga0268266_10000004 3300028379 Bacteria 1495817
130 Ga0268264_10235305 3300028381 Bacteria 1694
131 Ga0265319_1008740 3300028563 Bacteria 4402
132 Ga0265334_10002264 3300028573 Bacteria 9042
133 Ga0265318_10000164 3300028577 Bacteria 58752
134 Ga0265338_10026147 3300028800 Bacteria 5897
135 Ga0265338_10107044 3300028800 Unclassified 2262
136 Ga0265760_10000021 3300031090 Bacteria 70611
137 Ga0265760_10005979 3300031090 Bacteria 3477
138 Ga0265332_10011368 3300031238 Unclassified 3956
139 Ga0265320_10000098 3300031240 Bacteria 73999
140 Ga0265325_10004025 3300031241 Bacteria 9385
141 Ga0265325_10017162 3300031241 Bacteria 4028
142 Ga0265329_10000375 3300031242 Bacteria 23650
143 Ga0265340_10001899 3300031247 Bacteria 11912
144 Ga0265339_10002714 3300031249 Bacteria 12581
145 Ga0265331_10000081 3300031250 Bacteria 136351
146 Ga0265331_10009715 3300031250 Bacteria 5379
147 Ga0265316_10002055 3300031344 Bacteria 21193
148 Ga0265316_10002733 3300031344 Bacteria 18098
149 Ga0265313_10000761 3300031595 Bacteria 32812
150 Ga0265314_10014678 3300031711 Bacteria 6252
151 Ga0265342_10001101 3300031712 Bacteria 25982
152 Ga0316576_10067168 3300031727 Bacteria 2639
153 Ga0316578_10004866 3300031728 Bacteria 6418
154 Ga0316580_10014351 3300032139 Bacteria 2419
155 Ga0307510_10001742 3300033180 Bacteria 24237
156 Ga0373959_0013151 3300034820 Bacteria 1489
157 Ga0373926_0002078 3300035083 Bacteria 6307
158 Ga0373952_0007683 3300035092 Bacteria 2029
159 Ga0373954_0064046 3300035118 Bacteria 1738
160 Ga0373960_0020481 3300035121 Bacteria 1749
161 Ga0373924_0033592 3300035410 Bacteria 2072
162 Ga0373935_0011110 3300035692 Bacteria 5406
163 Ga0373937_0155801 3300036401 Unclassified 2141
164 Ga0373937_0254359 3300036401 Unclassified 1656
165 Ga0316582_0102575 3300036647 Bacteria 1896
166 Ga0316584_0001137 3300036712 Bacteria 15628
167 Ga0400483_063550 3300039062 Bacteria 10641
168 Ga0400483_076083 3300039062 Bacteria 10590
169 Ga0400483_169000 3300039062 Bacteria 3353
170 Ga0400483_205702 3300039062 Bacteria 10024
171 Ga0436365_1280436 3300039437 Bacteria 7377
172 Ga0436365_1655084 3300039437 Bacteria 2233
173 Ga0439436_0033334 3300041404 Bacteria 1492
174 Ga0439465_0090944 3300041413 Bacteria 1044
175 Ga0439448_0019455 3300042005 Bacteria 2091
176 Ga0439455_0002719 3300042012 Bacteria 3266
177 Ga0439459_0000071 3300042438 Bacteria 8615
178 Ga0451577_0010385 3300042876 Bacteria 8906
179 Ga0451577_0014020 3300042876 Bacteria 7479
180 Ga0451577_0045140 3300042876 Bacteria 3945
181 Ga0453683_0009770 3300044673 Bacteria 6396
182 Ga0453683_0031215 3300044673 Bacteria 3366
183 Ga0453683_0047192 3300044673 Bacteria 2700
184 Ga0453684_0000021 3300044712 Bacteria 873490
185 Ga0453684_0037909 3300044712 Bacteria 6606
186 Ga0453684_0148024 3300044712 Unclassified 2794
187 Ga0453684_0245124 3300044712 Bacteria 2061
188 Ga0453684_0279413 3300044712 Bacteria 1905
189 Ga0451576_0017236 3300045051 Bacteria 7946
190 Ga0451576_0185629 3300045051 Bacteria 2171
191 Ga0495592_0007694 3300046454 Bacteria 8064
192 Ga0495592_0025932 3300046454 Unclassified 4448
193 Ga0495592_0036126 3300046454 Unclassified 3722
194 Ga0495651_0001039 3300046462 Bacteria 21448
195 Ga0495651_0001102 3300046462 Bacteria 20829
196 Ga0495653_0010898 3300046463 Bacteria 7442
197 Ga0495650_0000250 3300046471 Bacteria 105746
198 Ga0495580_0016737 3300046472 Bacteria 5503
199 Ga0495580_0075954 3300046472 Unclassified 2344
200 Ga0495582_0047228 3300046473 Bacteria 2371
201 Ga0495608_0039100 3300046511 Unclassified 3181
202 Ga0495608_0142709 3300046511 Unclassified 1528
203 Ga0495618_0044860 3300046514 Bacteria 2788
204 Ga0495628_0001212 3300046516 Bacteria 23587
205 Ga0495628_0006792 3300046516 Bacteria 9951
206 Ga0495628_0029348 3300046516 Bacteria 4460
207 Ga0495630_0006910 3300046517 Bacteria 8088
208 Ga0495630_0017757 3300046517 Bacteria 5217
209 Ga0495652_0002599 3300046529 Bacteria 18460
210 Ga0495652_0012926 3300046529 Bacteria 7523
211 Ga0495665_0004089 3300046531 Bacteria 7861
212 Ga0495640_0071073 3300046533 Unclassified 2336
213 Ga0495586_0074379 3300046535 Bacteria 1859
214 Ga0495587_0004341 3300046536 Bacteria 9358
215 Ga0495633_0079748 3300046558 Bacteria 1524
216 Ga0495667_0002530 3300046559 Bacteria 12204
217 Ga0495634_0031528 3300046642 Bacteria 3650
218 Ga0495635_0006928 3300046663 Bacteria 7917
219 Ga0495635_0051820 3300046663 Unclassified 2827
220 Ga0495657_0001853 3300046675 Bacteria 18018
221 Ga0495657_0012480 3300046675 Bacteria 6312
222 Ga0495657_0037275 3300046675 Bacteria 3352
223 Ga0495599_0015014 3300046678 Unclassified 4800
224 Ga0495623_0000992 3300046679 Bacteria 19141
225 Ga0495646_0001860 3300046680 Bacteria 12695
226 Ga0495613_0013627 3300046689 Bacteria 6034
227 Ga0495613_0019953 3300046689 Bacteria 4996
228 Ga0495613_0183697 3300046689 Bacteria 1480
229 Ga0495624_0046995 3300046690 Bacteria 2743
230 Ga0495600_0137906 3300046809 Bacteria 1583
231 Ga0495604_0002438 3300047317 Bacteria 14882
232 Ga0495604_0050471 3300047317 Bacteria 3230
233 Ga0495674_0048451 3300047319 Bacteria 3760
234 Ga0495674_0205080 3300047319 Unclassified 1634
235 Ga0495674_0218402 3300047319 Bacteria 1576
236 Ga0495680_0001866 3300047322 Bacteria 22167
237 Ga0495680_0001971 3300047322 Bacteria 21567
238 Ga0495680_0065388 3300047322 Bacteria 2785
239 Ga0495675_0000084 3300047444 Bacteria 66406
240 Ga0495675_0036280 3300047444 Bacteria 3144
241 Ga0495675_0040897 3300047444 Unclassified 2955
242 Ga0495684_0004621 3300047471 Bacteria 10749
243 Ga0495684_0011279 3300047471 Bacteria 6903
244 Ga0495593_0024109 3300047673 Bacteria 3375
245 Ga0495602_0006958 3300048088 Bacteria 11879
246 Ga0495602_0170910 3300048088 Unclassified 1687
247 Ga0495614_0034667 3300048089 Bacteria 2169
248 Ga0496102_0016119 3300048905 Bacteria 6526
249 Ga0496109_0077437 3300048912 Bacteria 3060
250 Ga0496111_0021447 3300048914 Bacteria 4511
251 Ga0496113_0491199 3300048916 Bacteria 986
252 Ga0496114_0042770 3300048917 Bacteria 3755
253 Ga0496114_0073035 3300048917 Bacteria 2886
254 Ga0496114_0269550 3300048917 Bacteria 1500
255 Ga0496121_0153871 3300048924 Bacteria 1689
256 Ga0496125_0002065 3300048928 Bacteria 27123
257 Ga0496126_0035222 3300048929 Bacteria 4693
258 Ga0501034_0021798 3300049571 Bacteria 6527
259 Ga0501034_0240775 3300049571 Bacteria 1755
260 Ga0501047_0290372 3300049581 Bacteria 1479
261 Ga0501044_0441135 3300049823 Bacteria 1210
262 nmdc:mga05p37_133954_c2 3300050507 Bacteria 2257
263 nmdc:mga05p37_362287_c1 3300050507 Bacteria 1704
264 nmdc:mga06r32_36028_c1 3300050510 Bacteria 4672
265 nmdc:mga0n895_136248_c1 3300050512 Bacteria 2482
266 nmdc:mga0n895_295690_c1 3300050512 Bacteria 1642
267 nmdc:mga0n895_50697_c1 3300050512 Bacteria 4069
268 nmdc:mga0rr50_37491_c1 3300050513 Bacteria 3500
269 nmdc:mga08x19_41434_c1 3300050514 Bacteria 2933
270 nmdc:mga0a205_51637_c1 3300050515 Bacteria 3969
271 Ga0495612_0004328 3300053078 Bacteria 5886
272 2899360699 2899359706 Bacteria 10940472
273 Ga0105240_10010811
274 JGI25162J39368_1000052
275 Ga0070658_10003387
276 Ga0070676_10027306
277 Ga0070683_100124522
278 Ga0070670_100006617
279 Ga0068869_100000093
280 Ga0070666_10000007
281 Ga0070680_100002134
282 Ga0068868_100016801
283 Ga0070660_100004110
284 Ga0070661_100000335
285 Ga0070661_100008179
286 Ga0070675_100167186
287 Ga0070673_100243860
288 Ga0070659_100000472
289 Ga0070667_100307515
290 Ga0070703_10035824
291 Ga0070709_10122746
292 Ga0070709_10205621
293 Ga0070713_100052944
294 Ga0070713_100195347
295 Ga0070701_10031629
296 Ga0070694_100009967
297 Ga0070694_100170414
298 Ga0070708_100017471
299 Ga0070663_100003714
300 Ga0070662_100073631
301 Ga0068867_100011150
302 Ga0070706_100061881
303 Ga0070707_100000274
304 Ga0070707_100002770
305 Ga0070698_100102716
306 Ga0070699_100016652
307 Ga0070699_100140162
308 Ga0070679_100000446
309 Ga0070684_100069067
310 Ga0070697_100092423
311 Ga0070697_100264201
312 Ga0068853_100003799
313 Ga0070672_100015028
314 Ga0070695_100006034
315 Ga0070696_100000511
316 Ga0070693_100000013
317 Ga0070665_100000817
318 Ga0070704_100003348
319 Ga0070664_100003715
320 Ga0068857_100025327
321 Ga0068854_100000270
322 Ga0068856_100194300
323 Ga0070702_100025344
324 Ga0068859_100034083
325 Ga0068870_10050759
326 Ga0068860_100001994
327 Ga0068860_100200643
328 Ga0068862_100121293
329 Ga0068871_100138266
330 Ga0075428_100257418
331 Ga0075431_100030253
332 Ga0075433_10035495
333 Ga0075434_100142387
334 Ga0075434_100209579
335 Ga0075436_100008387
336 Ga0075436_100165542
337 Ga0097620_100034085
338 Ga0099794_10022899
339 Ga0105240_10048843
340 Ga0105245_10087759
341 Ga0114129_10065999
342 Ga0114129_10090281
343 Ga0105243_10041325
344 Ga0105241_10000138
345 Ga0105238_10001931
346 Ga0099796_10058610
347 Ga0157373_10001849
348 Ga0157370_10171208
349 Ga0157378_10003755
350 Ga0163162_10000552
351 Ga0157372_10003723
352 Ga0157372_10092123
353 Ga0157375_10111471
354 Ga0163163_10100301
355 Ga0163163_10149815
356 Ga0163163_10219181
357 Ga0163161_10093973
358 Ga0213876_10124510
359 Ga0228598_1001699
360 Ga0228598_1008079
361 Ga0207653_10002326
362 Ga0207688_10005041
363 Ga0207680_10000002
364 Ga0207699_10013576
365 Ga0207699_10156154
366 Ga0207645_10001613
367 Ga0207643_10000604
368 Ga0207705_10022154
369 Ga0207684_10101139
370 Ga0207654_10008793
371 Ga0207707_10000019
372 Ga0207695_10091901
373 Ga0207660_10000116
374 Ga0207657_10000225
375 Ga0207652_10009597
376 Ga0207646_10000005
377 Ga0207646_10000016
378 Ga0207694_10000177
379 Ga0207659_10142363
380 Ga0207700_10050614
381 Ga0207690_10002032
382 Ga0207706_10002826
383 Ga0207709_10136802
384 Ga0207670_10013821
385 Ga0207704_10025217
386 Ga0207665_10020001
387 Ga0207665_10241052
388 Ga0207689_10000816
389 Ga0207679_10000431
390 Ga0207667_10003191
391 Ga0207640_10002553
392 Ga0207658_10476680
393 Ga0207677_10013581
394 Ga0207639_10153498
395 Ga0207678_10000422
396 Ga0207702_10000281
397 Ga0207648_10001633
398 Ga0207674_10000193
399 Ga0207675_100061223
400 Ga0265354_1003980
401 Ga0268266_10000004
402 Ga0268264_10235305
403 Ga0265319_1008740
404 Ga0265334_10002264
405 Ga0265318_10000164
406 Ga0265338_10026147
407 Ga0265338_10107044
408 Ga0265760_10000021
409 Ga0265760_10005979
410 Ga0265332_10011368
411 Ga0265320_10000098
412 Ga0265325_10004025
413 Ga0265325_10017162
414 Ga0265329_10000375
415 Ga0265340_10001899
416 Ga0265339_10002714
417 Ga0265331_10000081
418 Ga0265331_10009715
419 Ga0265316_10002055
420 Ga0265316_10002733
421 Ga0265313_10000761
422 Ga0265314_10014678
423 Ga0265342_10001101
424 Ga0316576_10067168
425 Ga0316578_10004866
426 Ga0316580_10014351
427 Ga0307510_10001742
428 Ga0373959_0013151
429 Ga0373926_0002078
430 Ga0373952_0007683
431 Ga0373954_0064046
432 Ga0373960_0020481
433 Ga0373924_0033592
434 Ga0373935_0011110
435 Ga0373937_0155801
436 Ga0373937_0254359
437 Ga0316582_0102575
438 Ga0316584_0001137
439 Ga0400483_063550
440 Ga0400483_076083
441 Ga0400483_169000
442 Ga0400483_205702
443 Ga0436365_1280436
444 Ga0436365_1655084
445 Ga0439436_0033334
446 Ga0439465_0090944
447 Ga0439448_0019455
448 Ga0439455_0002719
449 Ga0439459_0000071
450 Ga0451577_0010385
451 Ga0451577_0014020
452 Ga0451577_0045140
453 Ga0453683_0009770
454 Ga0453683_0031215
455 Ga0453683_0047192
456 Ga0453684_0000021
457 Ga0453684_0037909
458 Ga0453684_0148024
459 Ga0453684_0245124
460 Ga0453684_0279413
461 Ga0451576_0017236
462 Ga0451576_0185629
463 Ga0495592_0007694
464 Ga0495592_0025932
465 Ga0495592_0036126
466 Ga0495651_0001039
467 Ga0495651_0001102
468 Ga0495653_0010898
469 Ga0495650_0000250
470 Ga0495580_0016737
471 Ga0495580_0075954
472 Ga0495582_0047228
473 Ga0495608_0039100
474 Ga0495608_0142709
475 Ga0495618_0044860
476 Ga0495628_0001212
477 Ga0495628_0006792
478 Ga0495628_0029348
479 Ga0495630_0006910
480 Ga0495630_0017757
481 Ga0495652_0002599
482 Ga0495652_0012926
483 Ga0495665_0004089
484 Ga0495640_0071073
485 Ga0495586_0074379
486 Ga0495587_0004341
487 Ga0495633_0079748
488 Ga0495667_0002530
489 Ga0495634_0031528
490 Ga0495635_0006928
491 Ga0495635_0051820
492 Ga0495657_0001853
493 Ga0495657_0012480
494 Ga0495657_0037275
495 Ga0495599_0015014
496 Ga0495623_0000992
497 Ga0495646_0001860
498 Ga0495613_0013627
499 Ga0495613_0019953
500 Ga0495613_0183697
501 Ga0495624_0046995
502 Ga0495600_0137906
503 Ga0495604_0002438
504 Ga0495604_0050471
505 Ga0495674_0048451
506 Ga0495674_0205080
507 Ga0495674_0218402
508 Ga0495680_0001866
509 Ga0495680_0001971
510 Ga0495680_0065388
511 Ga0495675_0000084
512 Ga0495675_0036280
513 Ga0495675_0040897
514 Ga0495684_0004621
515 Ga0495684_0011279
516 Ga0495593_0024109
517 Ga0495602_0006958
518 Ga0495602_0170910
519 Ga0495614_0034667
520 Ga0496102_0016119
521 Ga0496109_0077437
522 Ga0496111_0021447
523 Ga0496113_0491199
524 Ga0496114_0042770
525 Ga0496114_0073035
526 Ga0496114_0269550
527 Ga0496121_0153871
528 Ga0496125_0002065
529 Ga0496126_0035222
530 Ga0501034_0021798
531 Ga0501034_0240775
532 Ga0501047_0290372
533 Ga0501044_0441135
534 nmdc:mga05p37_133954_c2
535 nmdc:mga05p37_362287_c1
536 nmdc:mga06r32_36028_c1
537 nmdc:mga0n895_136248_c1
538 nmdc:mga0n895_295690_c1
539 nmdc:mga0n895_50697_c1
540 nmdc:mga0rr50_37491_c1
541 nmdc:mga08x19_41434_c1
542 nmdc:mga0a205_51637_c1
543 Ga0495612_0004328
544 2899360699

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

131

308

0.98

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

26

340

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bii-assembly1.cif.gz_B crystal structure of pyrococcus yayanosii glyoxylate hydroxypyruvate reductase in complex with nadp and malonate (re-refinement of 5aow) 0.957 2 330
5aov-assembly1.cif.gz_A-2 ternary crystal structure of pyrococcus furiosus glyoxylate hydroxypyruvate reductase in presence of glyoxylate 0.9483 1 330
2wwr-assembly2.cif.gz_B crystal structure of human glyoxylate reductase hydroxypyruvate reductase 0.9445 3 323
2gcg-assembly1.cif.gz_B ternary crystal structure of human glyoxylate reductase/hydroxypyruvate reductase 0.9443 3 323
6bii-assembly1.cif.gz_B crystal structure of pyrococcus yayanosii glyoxylate hydroxypyruvate reductase in complex with nadp and malonate (re-refinement of 5aow) 0.9401 2 330
ID Description Score Start End Superfamily
af_Q2FZW9_11_72_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9943 37 97 3.40.50.720
af_Q2FVW4_141_284_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9872 143 287 3.40.50.720
af_Q2FVW4_141_284_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9737 143 287 3.40.50.720
af_Q2FVW4_100_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9719 102 286 3.40.50.720
af_Q2FZW9_121_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9674 146 287 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A519IGZ2-F1-model_v4 deleted 0.9972 2 82
AF-A0A1A8J120-F1-model_v4 Glyoxylate reductase/hydroxypyruvate reductase b 0.9793 194 310 GO:0005829
GO:0008465
GO:0030267
GO:0051287
AF-A0A662VDZ6-F1-model_v4 D-glycerate dehydrogenase 0.9769 1 102 GO:0016616
GO:0051287
AF-A0A497P2W7-F1-model_v4 D-glycerate dehydrogenase 0.9754 1 179 GO:0016616
GO:0051287
AF-A0A354YDZ7-F1-model_v4 D-glycerate dehydrogenase 0.9752 2 248 GO:0005829
GO:0016618
GO:0030267
GO:0051287

Map