F377784

General Info

Members Datasets Scaffolds Average Seq Length
271 191 271 254

Family's Representative Sequence

Representative Sequence 3300035170|Ga0373943_0124779|Ga0373943_0124779_101_943
Length 280
Sequence MFLAFSARSAVPSDRQRRGYNRAMADLKHIVITGASSGIGATLAVALGAAGHRVALAARREPELQEVAARVGPGAIVVPTDVTRRGEVERLCDRAIEAFGHVDVWVNNAGRGITKPALELTDEELDLMMTVNVKSALYGMQAIAPHFIARGRGQIVNISSVLSRVPFATYRSGYNAAKAALNALTANARVDLARAHPGIHVTLVMPGLVRTEFQRNALGGSPPNPAAAEAQSAEEAVAAIVQAIDQPVAEIYTNPRHATAVVQRYFQDVGAFEREAAARG

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
91 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
92 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
93 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
97 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
98 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
99 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
100 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
101 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
102 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
103 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
104 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
105 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
106 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
107 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
109 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
110 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
111 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
112 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
113 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
114 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
117 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
118 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
119 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
120 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
121 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
122 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
123 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
129 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
130 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
134 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
135 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
136 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
137 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
138 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
139 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
140 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
141 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
142 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
143 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
144 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
145 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
146 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
147 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
148 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
149 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
150 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
151 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
152 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
153 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
156 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
157 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
158 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
159 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
160 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
161 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
162 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
163 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
164 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
165 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
166 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
167 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
168 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
169 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
170 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
171 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
172 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
173 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
174 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
175 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
176 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
177 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
178 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
179 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
180 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
181 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
184 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
185 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
187 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
188 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
189 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
190 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
191 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 2.95
Rhizosphere 94.1
Stem 0
Stem Tuber 0
Unclassified 2.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10105541 3300003316 Bacteria 1486
2 rootH1_10001245 3300003323 Unclassified 2994
3 Ga0065715_10105968 3300005293 Bacteria 2859
4 Ga0070670_100093795 3300005331 Bacteria 2582
5 Ga0068869_100069737 3300005334 Bacteria 2600
6 Ga0070666_10009295 3300005335 Bacteria 6125
7 Ga0070666_10023814 3300005335 Bacteria 3986
8 Ga0070675_100065078 3300005354 Bacteria 3014
9 Ga0070675_100434090 3300005354 Bacteria 1176
10 Ga0070667_100208150 3300005367 Bacteria 1738
11 Ga0070713_100000099 3300005436 Bacteria 55142
12 Ga0070713_100057279 3300005436 Bacteria 3244
13 Ga0070710_10243389 3300005437 Bacteria 1153
14 Ga0070711_100524992 3300005439 Bacteria 979
15 Ga0070705_100036657 3300005440 Bacteria 2760
16 Ga0070700_100060339 3300005441 Bacteria 2390
17 Ga0070694_100365326 3300005444 Bacteria 1122
18 Ga0070708_100004476 3300005445 Bacteria 10990
19 Ga0070708_100007276 3300005445 Bacteria 8853
20 Ga0070708_100048364 3300005445 Bacteria 3759
21 Ga0070681_10223499 3300005458 Bacteria 1798
22 Ga0068867_100326354 3300005459 Bacteria 1273
23 Ga0070685_10000401 3300005466 Bacteria 25965
24 Ga0070706_100007804 3300005467 Bacteria 9999
25 Ga0070706_100029622 3300005467 Bacteria 5043
26 Ga0070706_100061787 3300005467 Bacteria 3460
27 Ga0070706_100151125 3300005467 Bacteria 2167
28 Ga0070706_100498631 3300005467 Bacteria 1133
29 Ga0070707_100003614 3300005468 Bacteria 14594
30 Ga0070707_100047266 3300005468 Bacteria 4120
31 Ga0070698_100002008 3300005471 Bacteria 22594
32 Ga0070698_100120542 3300005471 Bacteria 2583
33 Ga0070699_100001531 3300005518 Bacteria 21129
34 Ga0070699_100007832 3300005518 Bacteria 9282
35 Ga0070699_100026729 3300005518 Bacteria 4978
36 Ga0070699_100148900 3300005518 Bacteria 2069
37 Ga0070679_100087881 3300005530 Bacteria 3096
38 Ga0070697_100244302 3300005536 Bacteria 1533
39 Ga0070686_100004883 3300005544 Bacteria 7398
40 Ga0070696_100096861 3300005546 Bacteria 2109
41 Ga0070665_100000081 3300005548 Bacteria 184646
42 Ga0070665_100002534 3300005548 Bacteria 20074
43 Ga0070704_100053205 3300005549 Bacteria 2861
44 Ga0068855_100208111 3300005563 Bacteria 2200
45 Ga0068854_100009434 3300005578 Bacteria 6301
46 Ga0068854_100749908 3300005578 Bacteria 847
47 Ga0068856_100036642 3300005614 Bacteria 4809
48 Ga0068864_100003406 3300005618 Bacteria 13147
49 Ga0068864_100018029 3300005618 Bacteria 5892
50 Ga0068864_100252549 3300005618 Bacteria 1638
51 Ga0068861_100385874 3300005719 Bacteria 1239
52 Ga0068863_100194632 3300005841 Unclassified 1949
53 Ga0068858_100021511 3300005842 Bacteria 6027
54 Ga0068860_100798900 3300005843 Bacteria 957
55 Ga0070717_10000155 3300006028 Bacteria 51546
56 Ga0070712_100001113 3300006175 Bacteria 16196
57 Ga0070712_100111909 3300006175 Bacteria 2039
58 Ga0097621_100032265 3300006237 Bacteria 4162
59 Ga0068871_100002711 3300006358 Bacteria 12088
60 Ga0075433_10038279 3300006852 Bacteria 4141
61 Ga0075434_100004919 3300006871 Bacteria 12108
62 Ga0075434_100013317 3300006871 Bacteria 7822
63 Ga0075434_100657466 3300006871 Bacteria 1066
64 Ga0068865_100001420 3300006881 Bacteria 13960
65 Ga0075436_100019392 3300006914 Bacteria 4660
66 Ga0075436_100146211 3300006914 Bacteria 1662
67 Ga0075435_100000904 3300007076 Bacteria 18681
68 Ga0075435_100033697 3300007076 Bacteria 4052
69 Ga0075435_100040993 3300007076 Bacteria 3699
70 Ga0105240_10037606 3300009093 Bacteria 6218
71 Ga0105240_10115131 3300009093 Bacteria 3247
72 Ga0105245_10022978 3300009098 Bacteria 5472
73 Ga0105247_10024314 3300009101 Bacteria 3649
74 Ga0114129_10035112 3300009147 Bacteria 7084
75 Ga0105241_10028837 3300009174 Bacteria 4135
76 Ga0105242_10034371 3300009176 Bacteria 4063
77 Ga0105248_10005929 3300009177 Bacteria 13433
78 Ga0105248_10432814 3300009177 Bacteria 1482
79 Ga0105237_10128341 3300009545 Bacteria 2530
80 Ga0157370_10150201 3300013104 Bacteria 2168
81 Ga0157370_10241870 3300013104 Bacteria 1670
82 Ga0157374_10074815 3300013296 Bacteria 3200
83 Ga0163163_10063017 3300014325 Bacteria 3675
84 Ga0163163_10469823 3300014325 Unclassified 1318
85 Ga0163163_10507484 3300014325 Bacteria 1268
86 Ga0157379_10177955 3300014968 Unclassified 1921
87 Ga0213876_10001185 3300021384 Bacteria 16484
88 Ga0207692_10185384 3300025898 Bacteria 1215
89 Ga0207710_10088231 3300025900 Unclassified 1448
90 Ga0207680_10010047 3300025903 Bacteria 4719
91 Ga0207699_10045952 3300025906 Bacteria 2551
92 Ga0207643_10024592 3300025908 Unclassified 3323
93 Ga0207705_10151214 3300025909 Bacteria 1739
94 Ga0207695_10321467 3300025913 Bacteria 1437
95 Ga0207671_10124424 3300025914 Unclassified 1973
96 Ga0207693_10012535 3300025915 Bacteria 6848
97 Ga0207693_10036278 3300025915 Bacteria 3886
98 Ga0207662_10035177 3300025918 Bacteria 2925
99 Ga0207646_10001225 3300025922 Bacteria 32229
100 Ga0207646_10107440 3300025922 Bacteria 2503
101 Ga0207646_10138028 3300025922 Bacteria 2196
102 Ga0207646_10178883 3300025922 Bacteria 1916
103 Ga0207646_10490379 3300025922 Bacteria 1107
104 Ga0207681_10438990 3300025923 Bacteria 1060
105 Ga0207694_10000013 3300025924 Bacteria 384823
106 Ga0207650_10021353 3300025925 Bacteria 4575
107 Ga0207650_10044257 3300025925 Bacteria 3271
108 Ga0207687_10041478 3300025927 Bacteria 3160
109 Ga0207700_10000179 3300025928 Bacteria 37917
110 Ga0207664_10001699 3300025929 Bacteria 14510
111 Ga0207664_10052485 3300025929 Bacteria 3224
112 Ga0207664_10068032 3300025929 Bacteria 2860
113 Ga0207664_10169973 3300025929 Bacteria 1865
114 Ga0207706_10177461 3300025933 Unclassified 1871
115 Ga0207711_10049015 3300025941 Bacteria 3615
116 Ga0207711_10285667 3300025941 Bacteria 1520
117 Ga0207689_10054507 3300025942 Bacteria 3292
118 Ga0207679_10040358 3300025945 Bacteria 3340
119 Ga0207679_10523807 3300025945 Unclassified 1060
120 Ga0207640_10400883 3300025981 Bacteria 1117
121 Ga0207640_10568912 3300025981 Bacteria 955
122 Ga0207703_10447169 3300026035 Bacteria 1206
123 Ga0207639_10177956 3300026041 Unclassified 1807
124 Ga0207639_10316264 3300026041 Bacteria 1385
125 Ga0207702_10019191 3300026078 Bacteria 5656
126 Ga0207648_10044663 3300026089 Bacteria 3888
127 Ga0207676_10046987 3300026095 Bacteria 3343
128 Ga0207676_10255954 3300026095 Bacteria 1578
129 Ga0207675_100241966 3300026118 Bacteria 1744
130 Ga0207675_100289523 3300026118 Bacteria 1593
131 Ga0207698_10372201 3300026142 Bacteria 1356
132 Ga0268266_10008950 3300028379 Bacteria 8861
133 Ga0268264_10069652 3300028381 Bacteria 2976
134 Ga0268264_10687030 3300028381 Bacteria 1016
135 Ga0268264_10793137 3300028381 Bacteria 946
136 Ga0265337_1029686 3300028556 Bacteria 1634
137 Ga0265323_10043040 3300028653 Bacteria 1632
138 Ga0307511_10003322 3300030521 Bacteria 16543
139 Ga0265327_10008795 3300031251 Bacteria 7447
140 Ga0307405_10398435 3300031731 Bacteria 1077
141 Ga0307407_10109202 3300031903 Bacteria 1734
142 Ga0373930_0005040 3300034816 Bacteria 2177
143 Ga0373950_0005069 3300034818 Bacteria 1954
144 Ga0373958_0006266 3300034819 Unclassified 1847
145 Ga0373926_0126030 3300035083 Bacteria 967
146 Ga0373928_0000623 3300035084 Bacteria 6964
147 Ga0373934_0000033 3300035086 Bacteria 44757
148 Ga0373934_0076321 3300035086 Bacteria 1344
149 Ga0373940_0013389 3300035088 Bacteria 1983
150 Ga0373944_0060770 3300035089 Unclassified 1212
151 Ga0373949_0000327 3300035090 Bacteria 16860
152 Ga0373951_0001475 3300035091 Bacteria 6145
153 Ga0373952_0007321 3300035092 Bacteria 2065
154 Ga0373923_0003479 3300035111 Bacteria 5051
155 Ga0373932_0001349 3300035112 Bacteria 6873
156 Ga0373939_0000543 3300035114 Bacteria 9455
157 Ga0373945_0052160 3300035116 Bacteria 1506
158 Ga0373954_0070160 3300035118 Bacteria 1664
159 Ga0373956_0000356 3300035119 Bacteria 18605
160 Ga0373957_0157505 3300035120 Bacteria 934
161 Ga0373943_0005246 3300035170 Bacteria 5831
162 Ga0373943_0027403 3300035170 Bacteria 2677
163 Ga0373943_0124779 3300035170 Bacteria 1372
164 Ga0373955_0000329 3300035172 Bacteria 19742
165 Ga0373961_0005087 3300035241 Bacteria 3162
166 Ga0373962_0000196 3300035242 Bacteria 12776
167 Ga0373924_0008449 3300035410 Bacteria 3743
168 Ga0373931_0000510 3300035691 Bacteria 15893
169 Ga0373935_0104995 3300035692 Bacteria 1868
170 Ga0373927_0013080 3300035695 Bacteria 5520
171 Ga0373927_0294827 3300035695 Bacteria 1067
172 Ga0373933_0000014 3300035724 Bacteria 103315
173 Ga0373947_0000095 3300035725 Bacteria 44887
174 Ga0373947_0020971 3300035725 Bacteria 3780
175 Ga0373947_0111550 3300035725 Bacteria 1729
176 Ga0373947_0219567 3300035725 Bacteria 1249
177 Ga0373937_0000121 3300036401 Bacteria 74568
178 Ga0373925_0005626 3300037068 Bacteria 9321
179 Ga0436365_0022907 3300039437 Unclassified 2534
180 Ga0436365_0734423 3300039437 Bacteria 24967
181 Ga0436365_0896287 3300039437 Bacteria 9034
182 Ga0451577_0366961 3300042876 Bacteria 1306
183 Ga0466969_0041147 3300044656 Bacteria 2313
184 Ga0466966_0018462 3300044684 Bacteria 4599
185 Ga0466963_0113017 3300044694 Bacteria 1865
186 Ga0453684_0188863 3300044712 Unclassified 2412
187 Ga0453684_0223901 3300044712 Bacteria 2177
188 Ga0451576_0005025 3300045051 Bacteria 16797
189 Ga0451576_0012449 3300045051 Bacteria 9553
190 Ga0451576_0074439 3300045051 Bacteria 3534
191 Ga0451576_0082601 3300045051 Bacteria 3341
192 Ga0451576_0123497 3300045051 Bacteria 2697
193 Ga0451576_0486046 3300045051 Bacteria 1297
194 Ga0466967_0167482 3300045976 Bacteria 2066
195 Ga0466967_0539223 3300045976 Bacteria 1148
196 Ga0495592_0015534 3300046454 Bacteria 5776
197 Ga0495603_0028299 3300046455 Bacteria 3380
198 Ga0495603_0242439 3300046455 Bacteria 1038
199 Ga0495629_0015572 3300046459 Bacteria 5459
200 Ga0495651_0000162 3300046462 Bacteria 49060
201 Ga0495653_0000068 3300046463 Bacteria 89954
202 Ga0495580_0009822 3300046472 Bacteria 7505
203 Ga0495639_0000069 3300046475 Bacteria 47817
204 Ga0495608_0000677 3300046511 Bacteria 23539
205 Ga0495618_0112974 3300046514 Bacteria 1739
206 Ga0495618_0253692 3300046514 Bacteria 1103
207 Ga0495628_0000522 3300046516 Bacteria 35234
208 Ga0495630_0007522 3300046517 Bacteria 7782
209 Ga0495643_0000025 3300046522 Bacteria 269043
210 Ga0495652_0000272 3300046529 Bacteria 61219
211 Ga0495665_0001381 3300046531 Bacteria 13000
212 Ga0495586_0027357 3300046535 Bacteria 3052
213 Ga0495587_0000094 3300046536 Bacteria 68989
214 Ga0495621_0005743 3300046539 Bacteria 3584
215 Ga0495645_0000062 3300046543 Bacteria 76081
216 Ga0495645_0018823 3300046543 Bacteria 4967
217 Ga0495622_0163207 3300046557 Bacteria 1004
218 Ga0495667_0000524 3300046559 Bacteria 24523
219 Ga0495635_0000297 3300046663 Bacteria 32094
220 Ga0495659_0022247 3300046664 Bacteria 2143
221 Ga0495588_0000665 3300046674 Bacteria 15892
222 Ga0495657_0000031 3300046675 Bacteria 124359
223 Ga0495599_0000243 3300046678 Bacteria 34374
224 Ga0495623_0000038 3300046679 Bacteria 80429
225 Ga0495646_0010669 3300046680 Bacteria 5836
226 Ga0495658_0001787 3300046683 Bacteria 11092
227 Ga0495613_0003605 3300046689 Bacteria 11605
228 Ga0495600_0000021 3300046809 Bacteria 95613
229 Ga0495600_0075731 3300046809 Bacteria 2197
230 Ga0495581_0001382 3300047315 Bacteria 13426
231 Ga0495581_0029652 3300047315 Bacteria 3171
232 Ga0495604_0000204 3300047317 Bacteria 53997
233 Ga0495636_0080154 3300047318 Bacteria 1405
234 Ga0495674_0002935 3300047319 Bacteria 16587
235 Ga0495680_0045610 3300047322 Bacteria 3461
236 Ga0495675_0007692 3300047444 Bacteria 6646
237 Ga0495684_0001626 3300047471 Bacteria 18029
238 Ga0495593_0000582 3300047673 Bacteria 20803
239 Ga0495602_0000622 3300048088 Bacteria 33255
240 Ga0495614_0007271 3300048089 Bacteria 4934
241 Ga0496102_0341459 3300048905 Bacteria 1410
242 Ga0496105_0222858 3300048908 Bacteria 1535
243 Ga0496106_0030631 3300048909 Unclassified 4011
244 Ga0496106_0093875 3300048909 Bacteria 2319
245 Ga0496112_0001736 3300048915 Bacteria 17065
246 Ga0496113_0155437 3300048916 Unclassified 1806
247 Ga0496114_0054492 3300048917 Bacteria 3335
248 Ga0496115_0040954 3300048918 Bacteria 3684
249 Ga0501067_0062904 3300049583 Bacteria 2055
250 nmdc:mga05p37_44629_c1 3300050507 Bacteria 5454
251 nmdc:mga0n895_105704_c1 3300050512 Bacteria 2828
252 nmdc:mga0n895_15_c1 3300050512 Bacteria 102361
253 nmdc:mga0n895_190143_c1 3300050512 Unclassified 2084
254 nmdc:mga0n895_40403_c1 3300050512 Bacteria 4531
255 nmdc:mga0rr50_156817_c1 3300050513 Unclassified 1845
256 nmdc:mga0rr50_15_c1 3300050513 Bacteria 189079
257 nmdc:mga0rr50_24653_c1 3300050513 Bacteria 4170
258 nmdc:mga0rr50_28753_c1 3300050513 Bacteria 3911
259 nmdc:mga0rr50_314203_c1 3300050513 Bacteria 1313
260 nmdc:mga0rr50_691_c1 3300050513 Bacteria 18017
261 nmdc:mga08x19_123041_c1 3300050514 Bacteria 1741
262 nmdc:mga08x19_125449_c1 3300050514 Bacteria 1724
263 nmdc:mga08x19_131_c1 3300050514 Bacteria 66501
264 nmdc:mga0a205_14729_c1 3300050515 Bacteria 7296
265 Ga0495601_0266432 3300053077 Bacteria 1118
266 Ga0495612_0000654 3300053078 Bacteria 13941
267 Ga0495595_0002538 3300053084 Bacteria 7163
268 Ga0495595_0059453 3300053084 Bacteria 1787
269 Ga0495619_0007385 3300053085 Bacteria 6962
270 Ga0495619_0080882 3300053085 Bacteria 2187
271 Ga0500628_014890 3300053129 Bacteria 1478

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035089 Ga0373944_0060770 Ga0373944_0060770_15_698 206
2 3300009093 Ga0105240_10037606 Ga0105240_100376065 207
3 3300025913 Ga0207695_10321467 Ga0207695_103214671 207
4 3300039437 Ga0436365_0734423 Ga0436365_0734423_21920_22666 207
5 3300030521 Ga0307511_10003322 Ga0307511_100033226 208
6 3300006914 Ga0075436_100146211 Ga0075436_1001462112 209
7 3300050514 nmdc:mga08x19_125449_c1 nmdc:mga08x19_125449_c1_93_854 209
8 3300045976 Ga0466967_0167482 Ga0466967_0167482_1220_1978 212
9 3300025923 Ga0207681_10438990 Ga0207681_104389901 213
10 3300025933 Ga0207706_10177461 Ga0207706_101774612 213
11 3300026041 Ga0207639_10177956 Ga0207639_101779562 213
12 3300026118 Ga0207675_100241966 Ga0207675_1002419662 213
13 3300034816 Ga0373930_0005040 Ga0373930_0005040_1093_1854 213
14 3300034818 Ga0373950_0005069 Ga0373950_0005069_232_993 213
15 3300034819 Ga0373958_0006266 Ga0373958_0006266_180_941 213
16 3300035084 Ga0373928_0000623 Ga0373928_0000623_1068_1829 213
17 3300035088 Ga0373940_0013389 Ga0373940_0013389_579_1340 213
18 3300035090 Ga0373949_0000327 Ga0373949_0000327_10104_10865 213
19 3300035091 Ga0373951_0001475 Ga0373951_0001475_4212_4973 213
20 3300035092 Ga0373952_0007321 Ga0373952_0007321_255_1016 213
21 3300035112 Ga0373932_0001349 Ga0373932_0001349_5839_6600 213
22 3300035114 Ga0373939_0000543 Ga0373939_0000543_4062_4823 213
23 3300035241 Ga0373961_0005087 Ga0373961_0005087_165_926 213
24 3300035242 Ga0373962_0000196 Ga0373962_0000196_182_943 213
25 3300035691 Ga0373931_0000510 Ga0373931_0000510_6565_7326 213
26 3300045051 Ga0451576_0005025 Ga0451576_0005025_13133_13894 213
27 3300048909 Ga0496106_0030631 Ga0496106_0030631_597_1355 213
28 3300050513 nmdc:mga0rr50_691_c1 nmdc:mga0rr50_691_c1_12913_13674 213
29 3300025909 Ga0207705_10151214 Ga0207705_101512143 215
30 3300006871 Ga0075434_100657466 Ga0075434_1006574662 218
31 3300046455 Ga0495603_0028299 Ga0495603_0028299_2063_2845 218
32 3300046664 Ga0495659_0022247 Ga0495659_0022247_55_834 218
33 3300005458 Ga0070681_10223499 Ga0070681_102234991 219
34 3300005466 Ga0070685_10000401 Ga0070685_1000040128 222
35 3300005578 Ga0068854_100749908 Ga0068854_1007499081 222
36 3300025981 Ga0207640_10568912 Ga0207640_105689121 222
37 3300009545 Ga0105237_10128341 Ga0105237_101283412 226
38 3300025914 Ga0207671_10124424 Ga0207671_101244242 226
39 3300028653 Ga0265323_10043040 Ga0265323_100430402 226
40 3300025922 Ga0207646_10178883 Ga0207646_101788832 227
41 3300005548 Ga0070665_100000081 Ga0070665_10000008137 228
42 3300021384 Ga0213876_10001185 Ga0213876_100011855 228
43 3300031903 Ga0307407_10109202 Ga0307407_101092021 228
44 3300039437 Ga0436365_0896287 Ga0436365_0896287_3177_3941 228
45 3300026035 Ga0207703_10447169 Ga0207703_104471692 230
46 3300028381 Ga0268264_10687030 Ga0268264_106870302 230
47 3300005334 Ga0068869_100069737 Ga0068869_1000697373 233
48 3300005335 Ga0070666_10009295 Ga0070666_100092953 233
49 3300005354 Ga0070675_100434090 Ga0070675_1004340901 233
50 3300005544 Ga0070686_100004883 Ga0070686_1000048836 233
51 3300005563 Ga0068855_100208111 Ga0068855_1002081113 233
52 3300005578 Ga0068854_100009434 Ga0068854_1000094346 233
53 3300005618 Ga0068864_100003406 Ga0068864_1000034065 233
54 3300005618 Ga0068864_100018029 Ga0068864_1000180294 233
55 3300005618 Ga0068864_100252549 Ga0068864_1002525492 233
56 3300005843 Ga0068860_100798900 Ga0068860_1007989001 233
57 3300006871 Ga0075434_100004919 Ga0075434_10000491913 233
58 3300006914 Ga0075436_100019392 Ga0075436_1000193924 233
59 3300007076 Ga0075435_100000904 Ga0075435_1000009049 233
60 3300009174 Ga0105241_10028837 Ga0105241_100288372 233
61 3300014325 Ga0163163_10063017 Ga0163163_100630174 233
62 3300014325 Ga0163163_10507484 Ga0163163_105074842 233
63 3300025903 Ga0207680_10010047 Ga0207680_100100471 233
64 3300025908 Ga0207643_10024592 Ga0207643_100245922 233
65 3300025918 Ga0207662_10035177 Ga0207662_100351774 233
66 3300025925 Ga0207650_10021353 Ga0207650_100213533 233
67 3300025942 Ga0207689_10054507 Ga0207689_100545074 233
68 3300025981 Ga0207640_10400883 Ga0207640_104008832 233
69 3300026095 Ga0207676_10255954 Ga0207676_102559542 233
70 3300026142 Ga0207698_10372201 Ga0207698_103722011 233
71 3300028381 Ga0268264_10793137 Ga0268264_107931371 233
72 3300035086 Ga0373934_0076321 Ga0373934_0076321_59_823 233
73 3300035695 Ga0373927_0294827 Ga0373927_0294827_169_933 233
74 3300046543 Ga0495645_0018823 Ga0495645_0018823_2707_3471 233
75 3300046809 Ga0495600_0075731 Ga0495600_0075731_479_1243 233
76 3300048905 Ga0496102_0341459 Ga0496102_0341459_256_1017 233
77 3300048909 Ga0496106_0093875 Ga0496106_0093875_364_1125 233
78 3300050512 nmdc:mga0n895_15_c1 nmdc:mga0n895_15_c1_54928_55689 233
79 3300050513 nmdc:mga0rr50_15_c1 nmdc:mga0rr50_15_c1_133272_134033 233
80 3300050514 nmdc:mga08x19_131_c1 nmdc:mga08x19_131_c1_29798_30559 233
81 3300053084 Ga0495595_0059453 Ga0495595_0059453_56_820 233
82 3300053085 Ga0495619_0080882 Ga0495619_0080882_360_1124 233
83 3300005335 Ga0070666_10023814 Ga0070666_100238144 234
84 3300005367 Ga0070667_100208150 Ga0070667_1002081502 234
85 3300005842 Ga0068858_100021511 Ga0068858_1000215117 234
86 3300006871 Ga0075434_100013317 Ga0075434_10001331710 234
87 3300009093 Ga0105240_10115131 Ga0105240_101151314 234
88 3300009098 Ga0105245_10022978 Ga0105245_100229785 234
89 3300009176 Ga0105242_10034371 Ga0105242_100343714 234
90 3300013296 Ga0157374_10074815 Ga0157374_100748154 234
91 3300025927 Ga0207687_10041478 Ga0207687_100414784 234
92 3300025941 Ga0207711_10285667 Ga0207711_102856672 234
93 3300028379 Ga0268266_10008950 Ga0268266_100089506 234
94 3300028381 Ga0268264_10069652 Ga0268264_100696521 234
95 3300048908 Ga0496105_0222858 Ga0496105_0222858_175_939 234
96 3300048917 Ga0496114_0054492 Ga0496114_0054492_1476_2240 234
97 3300048918 Ga0496115_0040954 Ga0496115_0040954_2414_3178 234
98 3300050512 nmdc:mga0n895_40403_c1 nmdc:mga0n895_40403_c1_2672_3436 234
99 3300050513 nmdc:mga0rr50_156817_c1 nmdc:mga0rr50_156817_c1_937_1701 234
100 3300050514 nmdc:mga08x19_123041_c1 nmdc:mga08x19_123041_c1_565_1329 234
101 3300035170 Ga0373943_0027403 Ga0373943_0027403_328_1089 235
102 3300035725 Ga0373947_0020971 Ga0373947_0020971_1837_2598 235
103 3300042876 Ga0451577_0366961 Ga0451577_0366961_352_1113 235
104 3300044712 Ga0453684_0188863 Ga0453684_0188863_750_1511 235
105 3300044712 Ga0453684_0223901 Ga0453684_0223901_768_1529 235
106 3300045051 Ga0451576_0012449 Ga0451576_0012449_6396_7157 235
107 3300045051 Ga0451576_0486046 Ga0451576_0486046_348_1115 235
108 3300005331 Ga0070670_100093795 Ga0070670_1000937952 236
109 3300005459 Ga0068867_100326354 Ga0068867_1003263541 236
110 3300005548 Ga0070665_100002534 Ga0070665_1000025346 236
111 3300005719 Ga0068861_100385874 Ga0068861_1003858741 236
112 3300005841 Ga0068863_100194632 Ga0068863_1001946324 236
113 3300006175 Ga0070712_100111909 Ga0070712_1001119091 236
114 3300006237 Ga0097621_100032265 Ga0097621_1000322652 236
115 3300006358 Ga0068871_100002711 Ga0068871_10000271111 236
116 3300006881 Ga0068865_100001420 Ga0068865_10000142013 236
117 3300009101 Ga0105247_10024314 Ga0105247_100243144 236
118 3300009177 Ga0105248_10005929 Ga0105248_1000592910 236
119 3300014325 Ga0163163_10469823 Ga0163163_104698231 236
120 3300014968 Ga0157379_10177955 Ga0157379_101779552 236
121 3300025900 Ga0207710_10088231 Ga0207710_100882312 236
122 3300025925 Ga0207650_10044257 Ga0207650_100442573 236
123 3300025941 Ga0207711_10049015 Ga0207711_100490154 236
124 3300025945 Ga0207679_10523807 Ga0207679_105238071 236
125 3300026041 Ga0207639_10316264 Ga0207639_103162642 236
126 3300026089 Ga0207648_10044663 Ga0207648_100446634 236
127 3300026095 Ga0207676_10046987 Ga0207676_100469874 236
128 3300028556 Ga0265337_1029686 Ga0265337_10296862 236
129 3300035170 Ga0373943_0124779 Ga0373943_0124779_101_943 236
130 3300035725 Ga0373947_0111550 Ga0373947_0111550_341_1111 236
131 3300046455 Ga0495603_0242439 Ga0495603_0242439_160_1002 236
132 3300046514 Ga0495618_0253692 Ga0495618_0253692_216_986 236
133 3300048915 Ga0496112_0001736 Ga0496112_0001736_483_1253 236
134 3300048916 Ga0496113_0155437 Ga0496113_0155437_364_1134 236
135 3300053077 Ga0495601_0266432 Ga0495601_0266432_215_985 236
136 3300003323 rootH1_10001245 rootH1_100012452 237
137 3300005293 Ga0065715_10105968 Ga0065715_101059682 237
138 3300005354 Ga0070675_100065078 Ga0070675_1000650784 237
139 3300005440 Ga0070705_100036657 Ga0070705_1000366574 237
140 3300005441 Ga0070700_100060339 Ga0070700_1000603393 237
141 3300005444 Ga0070694_100365326 Ga0070694_1003653262 237
142 3300005467 Ga0070706_100498631 Ga0070706_1004986312 237
143 3300005518 Ga0070699_100026729 Ga0070699_1000267297 237
144 3300005536 Ga0070697_100244302 Ga0070697_1002443022 237
145 3300005546 Ga0070696_100096861 Ga0070696_1000968613 237
146 3300005549 Ga0070704_100053205 Ga0070704_1000532051 237
147 3300006852 Ga0075433_10038279 Ga0075433_100382797 237
148 3300007076 Ga0075435_100033697 Ga0075435_1000336973 237
149 3300007076 Ga0075435_100040993 Ga0075435_1000409932 237
150 3300009147 Ga0114129_10035112 Ga0114129_100351122 237
151 3300009177 Ga0105248_10432814 Ga0105248_104328142 237
152 3300025922 Ga0207646_10490379 Ga0207646_104903791 237
153 3300025945 Ga0207679_10040358 Ga0207679_100403582 237
154 3300026118 Ga0207675_100289523 Ga0207675_1002895233 237
155 3300044656 Ga0466969_0041147 Ga0466969_0041147_1499_2293 237
156 3300044684 Ga0466966_0018462 Ga0466966_0018462_3490_4284 237
157 3300045051 Ga0451576_0082601 Ga0451576_0082601_2220_2999 237
158 3300046539 Ga0495621_0005743 Ga0495621_0005743_790_1563 237
159 3300049583 Ga0501067_0062904 Ga0501067_0062904_740_1513 237
160 3300050507 nmdc:mga05p37_44629_c1 nmdc:mga05p37_44629_c1_462_1238 237
161 3300050512 nmdc:mga0n895_105704_c1 nmdc:mga0n895_105704_c1_833_1609 237
162 3300050512 nmdc:mga0n895_190143_c1 nmdc:mga0n895_190143_c1_1124_1903 237
163 3300050513 nmdc:mga0rr50_24653_c1 nmdc:mga0rr50_24653_c1_2801_3580 237
164 3300050513 nmdc:mga0rr50_314203_c1 nmdc:mga0rr50_314203_c1_198_974 237
165 3300050515 nmdc:mga0a205_14729_c1 nmdc:mga0a205_14729_c1_618_1394 237
166 3300005445 Ga0070708_100004476 Ga0070708_1000044768 238
167 3300005445 Ga0070708_100007276 Ga0070708_1000072762 238
168 3300005467 Ga0070706_100007804 Ga0070706_1000078043 238
169 3300005467 Ga0070706_100151125 Ga0070706_1001511253 238
170 3300005468 Ga0070707_100003614 Ga0070707_1000036148 238
171 3300005471 Ga0070698_100120542 Ga0070698_1001205422 238
172 3300005518 Ga0070699_100007832 Ga0070699_10000783214 238
173 3300005518 Ga0070699_100148900 Ga0070699_1001489002 238
174 3300005614 Ga0068856_100036642 Ga0068856_1000366424 238
175 3300013104 Ga0157370_10150201 Ga0157370_101502012 238
176 3300013104 Ga0157370_10241870 Ga0157370_102418702 238
177 3300025922 Ga0207646_10001225 Ga0207646_1000122517 238
178 3300025922 Ga0207646_10138028 Ga0207646_101380282 238
179 3300025929 Ga0207664_10052485 Ga0207664_100524852 238
180 3300026078 Ga0207702_10019191 Ga0207702_100191912 238
181 3300039437 Ga0436365_0022907 Ga0436365_0022907_1693_2484 238
182 3300044694 Ga0466963_0113017 Ga0466963_0113017_652_1428 238
183 3300045051 Ga0451576_0074439 Ga0451576_0074439_755_1537 238
184 3300045051 Ga0451576_0123497 Ga0451576_0123497_1706_2491 238
185 3300053129 Ga0500628_014890 Ga0500628_014890_116_880 238
186 3300005445 Ga0070708_100048364 Ga0070708_1000483643 239
187 3300005467 Ga0070706_100029622 Ga0070706_1000296225 239
188 3300005467 Ga0070706_100061787 Ga0070706_1000617874 239
189 3300005468 Ga0070707_100047266 Ga0070707_1000472664 239
190 3300005471 Ga0070698_100002008 Ga0070698_10000200811 239
191 3300005518 Ga0070699_100001531 Ga0070699_10000153112 239
192 3300005530 Ga0070679_100087881 Ga0070679_1000878812 239
193 3300025922 Ga0207646_10107440 Ga0207646_101074403 239
194 3300031251 Ga0265327_10008795 Ga0265327_100087959 239
195 3300046522 Ga0495643_0000025 Ga0495643_0000025_174406_175230 239
196 3300025924 Ga0207694_10000013 Ga0207694_1000001396 240
197 3300047318 Ga0495636_0080154 Ga0495636_0080154_445_1251 240
198 3300031731 Ga0307405_10398435 Ga0307405_103984351 241
199 3300050513 nmdc:mga0rr50_28753_c1 nmdc:mga0rr50_28753_c1_1572_2351 241
200 3300035086 Ga0373934_0000033 Ga0373934_0000033_33223_34002 243
201 3300035111 Ga0373923_0003479 Ga0373923_0003479_3056_3835 243
202 3300035118 Ga0373954_0070160 Ga0373954_0070160_768_1547 243
203 3300035119 Ga0373956_0000356 Ga0373956_0000356_16918_17697 243
204 3300035120 Ga0373957_0157505 Ga0373957_0157505_71_850 243
205 3300035172 Ga0373955_0000329 Ga0373955_0000329_15803_16582 243
206 3300035410 Ga0373924_0008449 Ga0373924_0008449_2109_2888 243
207 3300035692 Ga0373935_0104995 Ga0373935_0104995_64_843 243
208 3300035724 Ga0373933_0000014 Ga0373933_0000014_68112_68891 243
209 3300035725 Ga0373947_0219567 Ga0373947_0219567_258_1037 243
210 3300036401 Ga0373937_0000121 Ga0373937_0000121_53204_53983 243
211 3300046454 Ga0495592_0015534 Ga0495592_0015534_3299_4078 243
212 3300046459 Ga0495629_0015572 Ga0495629_0015572_1197_1976 243
213 3300046462 Ga0495651_0000162 Ga0495651_0000162_40965_41744 243
214 3300046463 Ga0495653_0000068 Ga0495653_0000068_68093_68872 243
215 3300046511 Ga0495608_0000677 Ga0495608_0000677_16918_17697 243
216 3300046514 Ga0495618_0112974 Ga0495618_0112974_924_1703 243
217 3300046516 Ga0495628_0000522 Ga0495628_0000522_27043_27822 243
218 3300046529 Ga0495652_0000272 Ga0495652_0000272_34860_35639 243
219 3300046535 Ga0495586_0027357 Ga0495586_0027357_732_1511 243
220 3300046536 Ga0495587_0000094 Ga0495587_0000094_91_870 243
221 3300046543 Ga0495645_0000062 Ga0495645_0000062_7190_7969 243
222 3300046559 Ga0495667_0000524 Ga0495667_0000524_10953_11732 243
223 3300046663 Ga0495635_0000297 Ga0495635_0000297_10366_11145 243
224 3300046675 Ga0495657_0000031 Ga0495657_0000031_12309_13088 243
225 3300046678 Ga0495599_0000243 Ga0495599_0000243_7518_8297 243
226 3300046679 Ga0495623_0000038 Ga0495623_0000038_35288_36067 243
227 3300046680 Ga0495646_0010669 Ga0495646_0010669_3283_4062 243
228 3300046809 Ga0495600_0000021 Ga0495600_0000021_68141_68920 243
229 3300047315 Ga0495581_0029652 Ga0495581_0029652_539_1318 243
230 3300047317 Ga0495604_0000204 Ga0495604_0000204_17905_18684 243
231 3300047319 Ga0495674_0002935 Ga0495674_0002935_3502_4281 243
232 3300047322 Ga0495680_0045610 Ga0495680_0045610_1219_1998 243
233 3300047444 Ga0495675_0007692 Ga0495675_0007692_3113_3892 243
234 3300047471 Ga0495684_0001626 Ga0495684_0001626_9829_10608 243
235 3300048088 Ga0495602_0000622 Ga0495602_0000622_4332_5111 243
236 3300053078 Ga0495612_0000654 Ga0495612_0000654_10357_11136 243
237 3300053084 Ga0495595_0002538 Ga0495595_0002538_2705_3484 243
238 3300053085 Ga0495619_0007385 Ga0495619_0007385_4433_5212 243
239 3300005436 Ga0070713_100000099 Ga0070713_10000009943 244
240 3300005436 Ga0070713_100057279 Ga0070713_1000572792 244
241 3300005437 Ga0070710_10243389 Ga0070710_102433891 244
242 3300005439 Ga0070711_100524992 Ga0070711_1005249921 244
243 3300006028 Ga0070717_10000155 Ga0070717_1000015527 244
244 3300006175 Ga0070712_100001113 Ga0070712_10000111312 244
245 3300025898 Ga0207692_10185384 Ga0207692_101853842 244
246 3300025906 Ga0207699_10045952 Ga0207699_100459522 244
247 3300025915 Ga0207693_10012535 Ga0207693_100125353 244
248 3300025915 Ga0207693_10036278 Ga0207693_100362783 244
249 3300025928 Ga0207700_10000179 Ga0207700_1000017926 244
250 3300025929 Ga0207664_10001699 Ga0207664_100016997 244
251 3300025929 Ga0207664_10068032 Ga0207664_100680322 244
252 3300025929 Ga0207664_10169973 Ga0207664_101699732 244
253 3300035083 Ga0373926_0126030 Ga0373926_0126030_45_830 244
254 3300035116 Ga0373945_0052160 Ga0373945_0052160_448_1233 244
255 3300035170 Ga0373943_0005246 Ga0373943_0005246_2425_3210 244
256 3300035695 Ga0373927_0013080 Ga0373927_0013080_3464_4249 244
257 3300035725 Ga0373947_0000095 Ga0373947_0000095_5105_5890 244
258 3300037068 Ga0373925_0005626 Ga0373925_0005626_2410_3195 244
259 3300045976 Ga0466967_0539223 Ga0466967_0539223_344_1126 244
260 3300046472 Ga0495580_0009822 Ga0495580_0009822_1057_1842 244
261 3300046475 Ga0495639_0000069 Ga0495639_0000069_7393_8178 244
262 3300046517 Ga0495630_0007522 Ga0495630_0007522_1535_2320 244
263 3300046531 Ga0495665_0001381 Ga0495665_0001381_11370_12155 244
264 3300046557 Ga0495622_0163207 Ga0495622_0163207_111_896 244
265 3300046674 Ga0495588_0000665 Ga0495588_0000665_12274_13059 244
266 3300046683 Ga0495658_0001787 Ga0495658_0001787_7081_7866 244
267 3300046689 Ga0495613_0003605 Ga0495613_0003605_7589_8374 244
268 3300047315 Ga0495581_0001382 Ga0495581_0001382_11368_12153 244
269 3300047673 Ga0495593_0000582 Ga0495593_0000582_6869_7654 244
270 3300048089 Ga0495614_0007271 Ga0495614_0007271_476_1261 244
271 3300003316 rootH1_10105541 rootH1_101055412 245

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

28

219

0.97

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

34

249

0.89

PF08659

KR

KR domain

29

204

0.84

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

30

220

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
7e6o-assembly1.cif.gz_B crystal structure of polyol dehydrogenase from paracoccus denitrificans 0.9088 3 173
1gz6-assembly2.cif.gz_C (3r)-hydroxyacyl-coa dehydrogenase fragment of rat peroxisomal multifunctional enzyme type 2 0.89 3 169
1gz6-assembly1.cif.gz_B (3r)-hydroxyacyl-coa dehydrogenase fragment of rat peroxisomal multifunctional enzyme type 2 0.8857 3 169
8aeo-assembly1.cif.gz_A malonyl-coa reductase from chloroflexus aurantiacus - c-terminal r773a variant 0.8835 4 172
1gz6-assembly2.cif.gz_D (3r)-hydroxyacyl-coa dehydrogenase fragment of rat peroxisomal multifunctional enzyme type 2 0.8831 3 171
ID Description Score Start End Superfamily
5nahA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9226 5 37 3.50.50.60
af_P9WGQ3_5_269_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9159 3 178 3.40.50.720
af_Q0D3U8_30_207_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9068 3 151 3.40.50.720
af_Q20840_35_300_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8957 5 180 3.40.50.720
af_P05707_2_258_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8952 5 168 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A059X2M3-F1-model_v4 Short chain dehydrogenase 0.9341 3 176 GO:0016491
AF-A0A834BGK1-F1-model_v4 Estradiol 17-beta-dehydrogenase 11 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 11) (Dehydrogenase/reductase SDR family member 8) 0.932 3 176 GO:0005783
GO:0005811
GO:0006694
GO:0016229
GO:0016616
AF-A0A2E8B7T9-F1-model_v4 Short-chain dehydrogenase 0.9314 60 172 GO:0016616
AF-A0A2R2MIH0-F1-model_v4 Short-chain dehydrogenase/reductase 3-like 0.9281 3 176 GO:0005811
GO:0016616
AF-A0A1F2Q9D8-F1-model_v4 3-oxoacyl-ACP reductase 0.9279 58 172 GO:0016616

Feature Viewer

pLDDT pTM Quality
83.97 0.85 High
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Predicted Structure (AlphaFold2)

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