F377481

General Info

Members Datasets Scaffolds Average Seq Length
271 160 542 279

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100158394|Ga0070713_1001583941
Length 334
Sequence MAVETECPLRLRSLGPVFNSSVPSFPLCFKGFYNPMMPENWAFQNNVPQRVVSLQPSVTVTLRDLGLLDRLVACTKYCVDVCPEVLETGCIIVEDSWSAKADQIMAAKPDLVIASVPYQMESVAEILKSSLPFLGLAPKNLDDIYKDIMMIARIVSSEAPGASEACALRLVATMKKEVESMWQRTMDAERPLVYCEEWGKPLILSQTWVAELVEAAGGRFFGQPGKHTSEEEVTAADPEVIVAAWCGAGDRVPLEKIIPKRGWEQTKAAKHGRVYCINDEFLNTPASTLIQGLHALAAAIRPEMFVAPKGLRQIGENTLETQRKGVSGGLGIDK

Samples

Sample ID Description Type Environment
1 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
99 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
100 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
101 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
102 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
103 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
104 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
105 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
106 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
107 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
108 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
109 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
110 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
111 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
114 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
120 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
121 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
128 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
129 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
130 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
131 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
135 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
136 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
137 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
138 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
139 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
143 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
152 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
153 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
159 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
160 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 2.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.64
Rhizosphere 92.62
Stem 0
Stem Tuber 0
Unclassified 32.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070713_100158394 3300005436 Bacteria 2019
2 LJNas_1000661 3300000546 Bacteria 5799
3 Ga0058862_10207991 3300004803 Unclassified 1723
4 Ga0070676_10047767 3300005328 Bacteria 2501
5 Ga0070683_100033659 3300005329 Bacteria 4674
6 Ga0070682_100045028 3300005337 Unclassified 2733
7 Ga0070691_10061117 3300005341 Bacteria 1812
8 Ga0070668_100026551 3300005347 Unclassified 4395
9 Ga0070709_10000312 3300005434 Bacteria 30748
10 Ga0070709_10199753 3300005434 Unclassified 1415
11 Ga0070714_100000060 3300005435 Bacteria 100913
12 Ga0070714_100005055 3300005435 Bacteria 10033
13 Ga0070714_100180433 3300005435 Unclassified 1921
14 Ga0070714_100218590 3300005435 Unclassified 1750
15 Ga0070714_100290592 3300005435 Bacteria 1521
16 Ga0070713_100000162 3300005436 Bacteria 45425
17 Ga0070713_100018136 3300005436 Bacteria 5347
18 Ga0070713_100031349 3300005436 Unclassified 4234
19 Ga0070713_100092849 3300005436 Bacteria 2599
20 Ga0070710_10001044 3300005437 Bacteria 13170
21 Ga0070711_100004865 3300005439 Bacteria 7973
22 Ga0070711_100037353 3300005439 Bacteria 3259
23 Ga0070711_100061715 3300005439 Bacteria 2610
24 Ga0070708_100038337 3300005445 Unclassified 4187
25 Ga0070663_100006281 3300005455 Bacteria 7129
26 Ga0070681_10083271 3300005458 Bacteria 3152
27 Ga0070681_10119342 3300005458 Bacteria 2573
28 Ga0070706_100012684 3300005467 Bacteria 7797
29 Ga0070706_100178726 3300005467 Bacteria 1981
30 Ga0070707_100173825 3300005468 Bacteria 2099
31 Ga0070698_100016133 3300005471 Bacteria 7888
32 Ga0070698_100287505 3300005471 Bacteria 1575
33 Ga0070699_100006278 3300005518 Bacteria 10370
34 Ga0070679_100171740 3300005530 Unclassified 2140
35 Ga0070684_100005271 3300005535 Bacteria 9892
36 Ga0070697_100000481 3300005536 Bacteria 30316
37 Ga0070697_100005710 3300005536 Bacteria 9585
38 Ga0068853_100010295 3300005539 Bacteria 7564
39 Ga0068853_100177182 3300005539 Unclassified 1932
40 Ga0070695_100217107 3300005545 Bacteria 1376
41 Ga0070696_100037515 3300005546 Unclassified 3343
42 Ga0070693_100018724 3300005547 Bacteria 3621
43 Ga0070665_100037529 3300005548 Bacteria 4872
44 Ga0068855_100292760 3300005563 Unclassified 1804
45 Ga0068857_100024228 3300005577 Bacteria 5341
46 Ga0068857_100060763 3300005577 Unclassified 3356
47 Ga0068854_100243376 3300005578 Unclassified 1433
48 Ga0068856_100080283 3300005614 Bacteria 3235
49 Ga0068856_100209320 3300005614 Bacteria 1965
50 Ga0068856_100252703 3300005614 Unclassified 1778
51 Ga0068856_100433274 3300005614 Unclassified 1335
52 Ga0068852_100103005 3300005616 Unclassified 2580
53 Ga0068851_10006223 3300005834 Bacteria 5446
54 Ga0068858_100083404 3300005842 Bacteria 2972
55 Ga0068860_100015666 3300005843 Bacteria 7401
56 Ga0070717_10016305 3300006028 Bacteria 5758
57 Ga0070717_10041852 3300006028 Bacteria 3735
58 Ga0070717_10043343 3300006028 Unclassified 3672
59 Ga0070717_10085689 3300006028 Bacteria 2652
60 Ga0070717_10157594 3300006028 Bacteria 1968
61 Ga0070717_10172643 3300006028 Unclassified 1881
62 Ga0070717_10367443 3300006028 Unclassified 1289
63 Ga0070715_10014527 3300006163 Bacteria 2918
64 Ga0070715_10046284 3300006163 Unclassified 1849
65 Ga0070715_10145939 3300006163 Unclassified 1154
66 Ga0070716_100001391 3300006173 Bacteria 10730
67 Ga0070712_100000056 3300006175 Bacteria 56756
68 Ga0070712_100030768 3300006175 Bacteria 3612
69 Ga0070712_100093069 3300006175 Unclassified 2212
70 Ga0075433_10009963 3300006852 Bacteria 7613
71 Ga0075434_100000632 3300006871 Bacteria 27249
72 Ga0075436_100006128 3300006914 Bacteria 8256
73 Ga0075436_100038492 3300006914 Unclassified 3301
74 Ga0075436_100140819 3300006914 Unclassified 1695
75 Ga0075435_100077016 3300007076 Bacteria 2734
76 Ga0105240_10034210 3300009093 Bacteria 6558
77 Ga0105240_10215668 3300009093 Bacteria 2239
78 Ga0105245_10001562 3300009098 Bacteria 20775
79 Ga0105245_10112515 3300009098 Bacteria 2534
80 Ga0105245_10276642 3300009098 Bacteria 1639
81 Ga0105245_10542736 3300009098 Bacteria 1184
82 Ga0105247_10021502 3300009101 Bacteria 3882
83 Ga0105241_10036890 3300009174 Bacteria 3680
84 Ga0105241_10038365 3300009174 Bacteria 3611
85 Ga0105241_10168709 3300009174 Bacteria 1806
86 Ga0105242_10029598 3300009176 Bacteria 4368
87 Ga0105248_10277974 3300009177 Unclassified 1885
88 Ga0105237_10059167 3300009545 Unclassified 3833
89 Ga0105238_10085860 3300009551 Unclassified 3135
90 Ga0105238_10247032 3300009551 Unclassified 1762
91 Ga0105238_10618339 3300009551 Unclassified 1092
92 Ga0105249_10020166 3300009553 Bacteria 5957
93 Ga0157373_10012733 3300013100 Bacteria 6181
94 Ga0157370_10075448 3300013104 Unclassified 3178
95 Ga0157369_10141614 3300013105 Unclassified 2544
96 Ga0157374_10009965 3300013296 Bacteria 8158
97 Ga0157374_10125956 3300013296 Bacteria 2476
98 Ga0157374_10237074 3300013296 Bacteria 1793
99 Ga0157378_10051962 3300013297 Unclassified 3646
100 Ga0157378_10558470 3300013297 Bacteria 1151
101 Ga0157372_10088321 3300013307 Bacteria 3519
102 Ga0157372_10396655 3300013307 Bacteria 1608
103 Ga0157375_10004968 3300013308 Bacteria 11566
104 Ga0163163_10004358 3300014325 Bacteria 12056
105 Ga0163163_10070616 3300014325 Bacteria 3478
106 Ga0163163_10076433 3300014325 Unclassified 3343
107 Ga0182008_10050986 3300014497 Unclassified 2054
108 Ga0157377_10247129 3300014745 Bacteria 1154
109 Ga0157379_10001079 3300014968 Bacteria 22250
110 Ga0157379_10042037 3300014968 Unclassified 4080
111 Ga0206352_10017992 3300020078 Unclassified 1543
112 Ga0154015_1119517 3300020610 Bacteria 1527
113 Ga0224712_10008867 3300022467 Unclassified 3003
114 Ga0207656_10010867 3300025321 Bacteria 3424
115 Ga0207692_10003629 3300025898 Bacteria 6039
116 Ga0207685_10088348 3300025905 Bacteria 1299
117 Ga0207699_10000416 3300025906 Bacteria 21815
118 Ga0207684_10022651 3300025910 Bacteria 5363
119 Ga0207684_10234906 3300025910 Unclassified 1582
120 Ga0207654_10117338 3300025911 Unclassified 1666
121 Ga0207654_10275781 3300025911 Bacteria 1136
122 Ga0207707_10036204 3300025912 Unclassified 4316
123 Ga0207707_10504485 3300025912 Bacteria 1032
124 Ga0207695_10072444 3300025913 Bacteria 3515
125 Ga0207693_10000119 3300025915 Bacteria 69804
126 Ga0207693_10020418 3300025915 Bacteria 5269
127 Ga0207693_10036132 3300025915 Unclassified 3894
128 Ga0207663_10003336 3300025916 Bacteria 7839
129 Ga0207663_10012144 3300025916 Bacteria 4646
130 Ga0207663_10014369 3300025916 Unclassified 4330
131 Ga0207660_10108914 3300025917 Unclassified 2081
132 Ga0207652_10064460 3300025921 Unclassified 3171
133 Ga0207652_10173661 3300025921 Bacteria 1934
134 Ga0207646_10070886 3300025922 Unclassified 3113
135 Ga0207687_10003855 3300025927 Bacteria 10065
136 Ga0207687_10028281 3300025927 Bacteria 3767
137 Ga0207687_10233588 3300025927 Bacteria 1454
138 Ga0207700_10000611 3300025928 Bacteria 20908
139 Ga0207700_10003553 3300025928 Bacteria 9083
140 Ga0207700_10005967 3300025928 Bacteria 7332
141 Ga0207700_10050324 3300025928 Bacteria 3105
142 Ga0207700_10310302 3300025928 Unclassified 1364
143 Ga0207664_10000017 3300025929 Bacteria 230967
144 Ga0207664_10014754 3300025929 Bacteria 5654
145 Ga0207664_10055275 3300025929 Bacteria 3150
146 Ga0207664_10088293 3300025929 Bacteria 2537
147 Ga0207664_10134726 3300025929 Bacteria 2083
148 Ga0207664_10164437 3300025929 Bacteria 1895
149 Ga0207664_10190172 3300025929 Unclassified 1767
150 Ga0207664_10222549 3300025929 Unclassified 1637
151 Ga0207665_10006824 3300025939 Bacteria 7562
152 Ga0207711_10024010 3300025941 Bacteria 5103
153 Ga0207689_10012861 3300025942 Bacteria 7148
154 Ga0207667_10020353 3300025949 Bacteria 7383
155 Ga0207658_10041272 3300025986 Unclassified 3340
156 Ga0207703_10066556 3300026035 Bacteria 2964
157 Ga0207639_10058210 3300026041 Unclassified 2971
158 Ga0207639_10115151 3300026041 Bacteria 2198
159 Ga0207678_10000381 3300026067 Bacteria 40336
160 Ga0207702_10518727 3300026078 Bacteria 1163
161 Ga0207674_10022023 3300026116 Bacteria 6853
162 Ga0207674_10036200 3300026116 Bacteria 5146
163 Ga0207698_10143676 3300026142 Unclassified 2060
164 Ga0268264_10022618 3300028381 Bacteria 5130
165 Ga0265338_10054343 3300028800 Bacteria 3573
166 Ga0265338_10056053 3300028800 Bacteria 3500
167 Ga0265338_10215921 3300028800 Bacteria 1436
168 Ga0265762_1009739 3300030760 Bacteria 1715
169 Ga0265760_10003836 3300031090 Bacteria 4359
170 Ga0265760_10026870 3300031090 Bacteria 1685
171 Ga0265325_10003863 3300031241 Bacteria 9617
172 Ga0316212_1007283 3300033547 Unclassified 1598
173 Ga0373934_0027975 3300035086 Bacteria 2194
174 Ga0373944_0012902 3300035089 Bacteria 2311
175 Ga0373944_0038453 3300035089 Bacteria 1469
176 Ga0373936_0034974 3300035113 Unclassified 1999
177 Ga0373953_0007308 3300035117 Unclassified 3694
178 Ga0373954_0085976 3300035118 Unclassified 1506
179 Ga0373956_0024214 3300035119 Bacteria 2613
180 Ga0373956_0046971 3300035119 Bacteria 1930
181 Ga0373957_0002011 3300035120 Bacteria 5686
182 Ga0373943_0000779 3300035170 Bacteria 13936
183 Ga0373943_0010610 3300035170 Unclassified 4132
184 Ga0373946_0000613 3300035171 Bacteria 11839
185 Ga0373946_0010582 3300035171 Unclassified 3418
186 Ga0373955_0011034 3300035172 Bacteria 4290
187 Ga0373955_0024353 3300035172 Unclassified 3095
188 Ga0373924_0003692 3300035410 Bacteria 5282
189 Ga0373924_0021094 3300035410 Bacteria 2539
190 Ga0373931_0066093 3300035691 Bacteria 1961
191 Ga0373935_0003125 3300035692 Bacteria 9554
192 Ga0373935_0036143 3300035692 Bacteria 3087
193 Ga0373935_0119860 3300035692 Bacteria 1756
194 Ga0373935_0136300 3300035692 Bacteria 1654
195 Ga0373927_0000085 3300035695 Bacteria 70359
196 Ga0373927_0009921 3300035695 Bacteria 6383
197 Ga0373933_0011428 3300035724 Unclassified 4892
198 Ga0373933_0036263 3300035724 Bacteria 2885
199 Ga0373947_0003515 3300035725 Bacteria 9254
200 Ga0373947_0051403 3300035725 Unclassified 2479
201 Ga0373947_0080119 3300035725 Bacteria 2019
202 Ga0373937_0005695 3300036401 Bacteria 10699
203 Ga0373937_0068713 3300036401 Viruses 3266
204 Ga0373937_0530859 3300036401 Bacteria 1118
205 Ga0373925_0002554 3300037068 Bacteria 14495
206 Ga0373925_0009268 3300037068 Bacteria 7163
207 Ga0373925_0194405 3300037068 Unclassified 1611
208 Ga0395905_0033932 3300037471 Bacteria 4793
209 Ga0436363_1595354 3300039450 Bacteria 8875
210 Ga0439448_0092490 3300042005 Bacteria 1023
211 Ga0466957_0001274 3300044842 Bacteria 13127
212 Ga0451576_0081959 3300045051 Unclassified 3355
213 Ga0466958_0030361 3300045836 Bacteria 3210
214 Ga0495580_0037248 3300046472 Bacteria 3492
215 Ga0495580_0042811 3300046472 Bacteria 3224
216 Ga0495662_0170660 3300046476 Unclassified 1072
217 Ga0495664_0013122 3300046477 Bacteria 4700
218 Ga0495664_0213231 3300046477 Bacteria 1169
219 Ga0495628_0047983 3300046516 Unclassified 3386
220 Ga0495630_0236388 3300046517 Unclassified 1396
221 Ga0495665_0051876 3300046531 Unclassified 2172
222 Ga0495665_0058496 3300046531 Unclassified 2035
223 Ga0495665_0175544 3300046531 Unclassified 1114
224 Ga0495586_0135681 3300046535 Bacteria 1379
225 Ga0495586_0410796 3300046535 Unclassified 779
226 Ga0495645_0045761 3300046543 Bacteria 3193
227 Ga0495667_0144971 3300046559 Bacteria 1530
228 Ga0495635_0026671 3300046663 Unclassified 4019
229 Ga0495657_0055669 3300046675 Bacteria 2638
230 Ga0495623_0066299 3300046679 Unclassified 2256
231 Ga0495623_0223017 3300046679 Unclassified 1073
232 Ga0495669_0195997 3300046684 Unclassified 965
233 Ga0495669_0206335 3300046684 Unclassified 940
234 Ga0495624_0187628 3300046690 Bacteria 1258
235 Ga0495624_0275569 3300046690 Unclassified 1016
236 Ga0495600_0212751 3300046809 Unclassified 1238
237 Ga0495581_0094456 3300047315 Unclassified 1736
238 Ga0495581_0184388 3300047315 Bacteria 1221
239 Ga0495581_0210082 3300047315 Bacteria 1138
240 Ga0495604_0056769 3300047317 Bacteria 3012
241 Ga0495674_0387008 3300047319 Bacteria 1131
242 Ga0495675_0017044 3300047444 Bacteria 4599
243 Ga0495684_0203169 3300047471 Bacteria 1460
244 Ga0495684_0257229 3300047471 Bacteria 1268
245 Ga0495593_0085296 3300047673 Bacteria 1630
246 Ga0495602_0084168 3300048088 Unclassified 2662
247 Ga0496100_0154515 3300048903 Unclassified 1640
248 Ga0496100_0693604 3300048903 Bacteria 794
249 Ga0496101_0060527 3300048904 Bacteria 2748
250 Ga0496102_0003593 3300048905 Bacteria 13135
251 Ga0496102_0035381 3300048905 Unclassified 4495
252 Ga0496104_0008923 3300048907 Bacteria 8910
253 Ga0496104_0048679 3300048907 Bacteria 3996
254 Ga0496105_0012061 3300048908 Bacteria 6842
255 Ga0496105_0199645 3300048908 Bacteria 1633
256 Ga0496106_0136745 3300048909 Bacteria 1925
257 Ga0496109_0037739 3300048912 Unclassified 4366
258 Ga0496110_0208999 3300048913 Bacteria 1774
259 Ga0496112_0019287 3300048915 Bacteria 6434
260 Ga0496112_0052762 3300048915 Bacteria 3991
261 Ga0496112_0310568 3300048915 Bacteria 1522
262 Ga0496113_0014244 3300048916 Bacteria 5420
263 Ga0496113_0091920 3300048916 Unclassified 2340
264 Ga0496115_0443737 3300048918 Unclassified 1049
265 nmdc:mga0n895_1298_c1 3300050512 Bacteria 18486
266 nmdc:mga0rr50_203384_c1 3300050513 Unclassified 1628
267 nmdc:mga0rr50_509291_c1 3300050513 Unclassified 1024
268 nmdc:mga08x19_136693_c1 3300050514 Unclassified 1653
269 nmdc:mga08x19_20345_c1 3300050514 Unclassified 4086
270 nmdc:mga08x19_237837_c1 3300050514 Bacteria 1255
271 nmdc:mga0a205_36066_c1 3300050515 Bacteria 4751
272 Ga0070713_100158394
273 LJNas_1000661
274 Ga0058862_10207991
275 Ga0070676_10047767
276 Ga0070683_100033659
277 Ga0070682_100045028
278 Ga0070691_10061117
279 Ga0070668_100026551
280 Ga0070709_10000312
281 Ga0070709_10199753
282 Ga0070714_100000060
283 Ga0070714_100005055
284 Ga0070714_100180433
285 Ga0070714_100218590
286 Ga0070714_100290592
287 Ga0070713_100000162
288 Ga0070713_100018136
289 Ga0070713_100031349
290 Ga0070713_100092849
291 Ga0070710_10001044
292 Ga0070711_100004865
293 Ga0070711_100037353
294 Ga0070711_100061715
295 Ga0070708_100038337
296 Ga0070663_100006281
297 Ga0070681_10083271
298 Ga0070681_10119342
299 Ga0070706_100012684
300 Ga0070706_100178726
301 Ga0070707_100173825
302 Ga0070698_100016133
303 Ga0070698_100287505
304 Ga0070699_100006278
305 Ga0070679_100171740
306 Ga0070684_100005271
307 Ga0070697_100000481
308 Ga0070697_100005710
309 Ga0068853_100010295
310 Ga0068853_100177182
311 Ga0070695_100217107
312 Ga0070696_100037515
313 Ga0070693_100018724
314 Ga0070665_100037529
315 Ga0068855_100292760
316 Ga0068857_100024228
317 Ga0068857_100060763
318 Ga0068854_100243376
319 Ga0068856_100080283
320 Ga0068856_100209320
321 Ga0068856_100252703
322 Ga0068856_100433274
323 Ga0068852_100103005
324 Ga0068851_10006223
325 Ga0068858_100083404
326 Ga0068860_100015666
327 Ga0070717_10016305
328 Ga0070717_10041852
329 Ga0070717_10043343
330 Ga0070717_10085689
331 Ga0070717_10157594
332 Ga0070717_10172643
333 Ga0070717_10367443
334 Ga0070715_10014527
335 Ga0070715_10046284
336 Ga0070715_10145939
337 Ga0070716_100001391
338 Ga0070712_100000056
339 Ga0070712_100030768
340 Ga0070712_100093069
341 Ga0075433_10009963
342 Ga0075434_100000632
343 Ga0075436_100006128
344 Ga0075436_100038492
345 Ga0075436_100140819
346 Ga0075435_100077016
347 Ga0105240_10034210
348 Ga0105240_10215668
349 Ga0105245_10001562
350 Ga0105245_10112515
351 Ga0105245_10276642
352 Ga0105245_10542736
353 Ga0105247_10021502
354 Ga0105241_10036890
355 Ga0105241_10038365
356 Ga0105241_10168709
357 Ga0105242_10029598
358 Ga0105248_10277974
359 Ga0105237_10059167
360 Ga0105238_10085860
361 Ga0105238_10247032
362 Ga0105238_10618339
363 Ga0105249_10020166
364 Ga0157373_10012733
365 Ga0157370_10075448
366 Ga0157369_10141614
367 Ga0157374_10009965
368 Ga0157374_10125956
369 Ga0157374_10237074
370 Ga0157378_10051962
371 Ga0157378_10558470
372 Ga0157372_10088321
373 Ga0157372_10396655
374 Ga0157375_10004968
375 Ga0163163_10004358
376 Ga0163163_10070616
377 Ga0163163_10076433
378 Ga0182008_10050986
379 Ga0157377_10247129
380 Ga0157379_10001079
381 Ga0157379_10042037
382 Ga0206352_10017992
383 Ga0154015_1119517
384 Ga0224712_10008867
385 Ga0207656_10010867
386 Ga0207692_10003629
387 Ga0207685_10088348
388 Ga0207699_10000416
389 Ga0207684_10022651
390 Ga0207684_10234906
391 Ga0207654_10117338
392 Ga0207654_10275781
393 Ga0207707_10036204
394 Ga0207707_10504485
395 Ga0207695_10072444
396 Ga0207693_10000119
397 Ga0207693_10020418
398 Ga0207693_10036132
399 Ga0207663_10003336
400 Ga0207663_10012144
401 Ga0207663_10014369
402 Ga0207660_10108914
403 Ga0207652_10064460
404 Ga0207652_10173661
405 Ga0207646_10070886
406 Ga0207687_10003855
407 Ga0207687_10028281
408 Ga0207687_10233588
409 Ga0207700_10000611
410 Ga0207700_10003553
411 Ga0207700_10005967
412 Ga0207700_10050324
413 Ga0207700_10310302
414 Ga0207664_10000017
415 Ga0207664_10014754
416 Ga0207664_10055275
417 Ga0207664_10088293
418 Ga0207664_10134726
419 Ga0207664_10164437
420 Ga0207664_10190172
421 Ga0207664_10222549
422 Ga0207665_10006824
423 Ga0207711_10024010
424 Ga0207689_10012861
425 Ga0207667_10020353
426 Ga0207658_10041272
427 Ga0207703_10066556
428 Ga0207639_10058210
429 Ga0207639_10115151
430 Ga0207678_10000381
431 Ga0207702_10518727
432 Ga0207674_10022023
433 Ga0207674_10036200
434 Ga0207698_10143676
435 Ga0268264_10022618
436 Ga0265338_10054343
437 Ga0265338_10056053
438 Ga0265338_10215921
439 Ga0265762_1009739
440 Ga0265760_10003836
441 Ga0265760_10026870
442 Ga0265325_10003863
443 Ga0316212_1007283
444 Ga0373934_0027975
445 Ga0373944_0012902
446 Ga0373944_0038453
447 Ga0373936_0034974
448 Ga0373953_0007308
449 Ga0373954_0085976
450 Ga0373956_0024214
451 Ga0373956_0046971
452 Ga0373957_0002011
453 Ga0373943_0000779
454 Ga0373943_0010610
455 Ga0373946_0000613
456 Ga0373946_0010582
457 Ga0373955_0011034
458 Ga0373955_0024353
459 Ga0373924_0003692
460 Ga0373924_0021094
461 Ga0373931_0066093
462 Ga0373935_0003125
463 Ga0373935_0036143
464 Ga0373935_0119860
465 Ga0373935_0136300
466 Ga0373927_0000085
467 Ga0373927_0009921
468 Ga0373933_0011428
469 Ga0373933_0036263
470 Ga0373947_0003515
471 Ga0373947_0051403
472 Ga0373947_0080119
473 Ga0373937_0005695
474 Ga0373937_0068713
475 Ga0373937_0530859
476 Ga0373925_0002554
477 Ga0373925_0009268
478 Ga0373925_0194405
479 Ga0395905_0033932
480 Ga0436363_1595354
481 Ga0439448_0092490
482 Ga0466957_0001274
483 Ga0451576_0081959
484 Ga0466958_0030361
485 Ga0495580_0037248
486 Ga0495580_0042811
487 Ga0495662_0170660
488 Ga0495664_0013122
489 Ga0495664_0213231
490 Ga0495628_0047983
491 Ga0495630_0236388
492 Ga0495665_0051876
493 Ga0495665_0058496
494 Ga0495665_0175544
495 Ga0495586_0135681
496 Ga0495586_0410796
497 Ga0495645_0045761
498 Ga0495667_0144971
499 Ga0495635_0026671
500 Ga0495657_0055669
501 Ga0495623_0066299
502 Ga0495623_0223017
503 Ga0495669_0195997
504 Ga0495669_0206335
505 Ga0495624_0187628
506 Ga0495624_0275569
507 Ga0495600_0212751
508 Ga0495581_0094456
509 Ga0495581_0184388
510 Ga0495581_0210082
511 Ga0495604_0056769
512 Ga0495674_0387008
513 Ga0495675_0017044
514 Ga0495684_0203169
515 Ga0495684_0257229
516 Ga0495593_0085296
517 Ga0495602_0084168
518 Ga0496100_0154515
519 Ga0496100_0693604
520 Ga0496101_0060527
521 Ga0496102_0003593
522 Ga0496102_0035381
523 Ga0496104_0008923
524 Ga0496104_0048679
525 Ga0496105_0012061
526 Ga0496105_0199645
527 Ga0496106_0136745
528 Ga0496109_0037739
529 Ga0496110_0208999
530 Ga0496112_0019287
531 Ga0496112_0052762
532 Ga0496112_0310568
533 Ga0496113_0014244
534 Ga0496113_0091920
535 Ga0496115_0443737
536 nmdc:mga0n895_1298_c1
537 nmdc:mga0rr50_203384_c1
538 nmdc:mga0rr50_509291_c1
539 nmdc:mga08x19_136693_c1
540 nmdc:mga08x19_20345_c1
541 nmdc:mga08x19_237837_c1
542 nmdc:mga0a205_36066_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01497

Peripla_BP_2

Periplasmic binding protein

51

281

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r79-assembly1.cif.gz_A crystal structure of a periplasmic heme binding protein from pseudomonas aeruginosa 0.8484 7 268
5y8b-assembly1.cif.gz_A periplasmic heme-binding protein rhut from roseiflexus sp. rs-1 in apo form 0.8461 8 257
4ls3-assembly2.cif.gz_B the crystal structure of helicobacter pylori ceue(hp1561)/ni-his compl 0.8386 7 257
2rg7-assembly1.cif.gz_C apo- crystal structure of a periplasmic heme binding protein from shigella dysenteriae 0.8385 8 256
5m3b-assembly1.cif.gz_A structure of cobinamide-bound btuf mutant w66l, the periplasmic vitamin b12 binding protein in e.coli 0.8374 9 255
ID Description Score Start End Superfamily
3pshA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8887 6 126 3.40.50.1980
2r79A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8586 7 126 3.40.50.1980
4ls3A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8578 7 115 3.40.50.1980
5yscA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8514 7 122 3.40.50.1980
5cr9A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8505 99 252 3.40.50.1980
ID Description Score Start End GO Terms
AF-A0A3A0ARR5-F1-model_v4 Fe3+-hydroxamate ABC transporter substrate-binding protein 0.9324 8 255
AF-A0A1M6H1T7-F1-model_v4 Substrate-binding protein 0.9213 4 141 GO:0071281
AF-A0A1Q6YGH2-F1-model_v4 Fe/B12 periplasmic-binding domain-containing protein 0.9194 9 262
AF-A0A4V1T8J0-F1-model_v4 Cobalamin-binding protein 0.9186 1 173
AF-A0A0T6A3A4-F1-model_v4 Periplasmic binding protein, iron complex transport system substrate-binding protein 0.9138 7 259 GO:0016020
GO:0071281

Map