F377303

General Info

Members Datasets Scaffolds Average Seq Length
270 188 538 327

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2547132111|2547408055
Length 391
Sequence QVNADTLARSRFVVSPLAETFACLKLLHAGVAAHPGERAWLDAHLPAHRRRLAGDPVTALLVRAGLGRGWIADFLTPAPREGEGFEEGVARVRATRPDQARADLAVSLGGPLPADLDRDDLPARAAALLEDVWTEAVRPDWDRRRRVLEADVVARTARVSRGGWAAVLDALRPGTRWLGDGRLQINANPYPPRELSGAELVLVPVTAQRRGWVSWEEPERYAVVYPCTGVLADDGVRRVPAALGALLGPARAGVLTLLGSPMSTSQLVGVTGQGLGSVGRHLRVLLEAGLVERRRAGRSVLYSRTAAGEVLIEASGPGAAEVREEGGARGDGGPWEGGARGDGGAREGDAREGDAREGDAREGDAREGDAREGDAREAGAREAGARGDGGP

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
11 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
12 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
13 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
14 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
15 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
16 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
17 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
18 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
19 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
20 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
21 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
22 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
31 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
32 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
33 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
34 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
35 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
36 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
37 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
38 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
39 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
40 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
41 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
42 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
43 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
44 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
45 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
46 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
47 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
48 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
49 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
50 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
51 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
52 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
53 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
54 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
55 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
56 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
57 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
58 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
59 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
60 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
61 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
62 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
66 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
67 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
68 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
69 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
72 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
73 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
74 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
77 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
83 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
84 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
87 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
88 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
93 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
94 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
95 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
98 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
99 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
100 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
101 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
102 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
103 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
109 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
112 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
113 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
114 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
115 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
119 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
120 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
121 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
145 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
146 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
147 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
148 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
149 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
150 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
151 2643221647 Streptomyces sp. Root369 Isolate Unclassified
152 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
153 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
154 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
155 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
156 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
157 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
158 2808606448 Streptomyces sp. 193411 Isolate Unclassified
159 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
160 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
161 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
162 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
163 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
164 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
165 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
166 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
167 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
168 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
169 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
170 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
171 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
172 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
173 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
174 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
175 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
176 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
177 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
178 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
179 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
180 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
181 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
182 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
183 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
184 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
185 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
186 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
187 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
188 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.07
Metatranscriptomes 0.37
Isolates 15.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.48
Nodule 0.37
Rhizoplane 3.7
Rhizosphere 80.74
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10025242 3300003203 Bacteria 2310
2 rootH2_10031023 3300003320 Bacteria 2408
3 Ga0006562J51391_1079578 3300003578 Bacteria 3680
4 Ga0070709_10000764 3300005434 Bacteria 18084
5 Ga0070714_100004707 3300005435 Bacteria 10317
6 Ga0070714_100004934 3300005435 Bacteria 10142
7 Ga0070714_100313651 3300005435 Bacteria 1465
8 Ga0070713_100016616 3300005436 Bacteria 5535
9 Ga0070713_100025607 3300005436 Bacteria 4615
10 Ga0070713_100107060 3300005436 Bacteria 2431
11 Ga0070710_10000570 3300005437 Bacteria 17506
12 Ga0070711_100000642 3300005439 Bacteria 18210
13 Ga0070711_100037659 3300005439 Bacteria 3246
14 Ga0081539_10000027 3300005985 Bacteria 328691
15 Ga0070717_10001066 3300006028 Bacteria 18407
16 Ga0070717_10024701 3300006028 Bacteria 4774
17 Ga0070717_10098738 3300006028 Bacteria 2476
18 Ga0070717_10428446 3300006028 Bacteria 1190
19 Ga0075363_100024031 3300006048 Bacteria 3095
20 Ga0070715_10007046 3300006163 Bacteria 3851
21 Ga0070716_100000606 3300006173 Bacteria 15146
22 Ga0070712_100026610 3300006175 Bacteria 3855
23 Ga0105251_10005712 3300009011 Bacteria 8075
24 Ga0105245_10355112 3300009098 Bacteria 1453
25 Ga0105243_10197777 3300009148 Bacteria 1761
26 Ga0182008_10003342 3300014497 Bacteria 9742
27 Ga0182007_10000436 3300015262 Bacteria 25430
28 Ga0209758_1002297 3300025297 Bacteria 19762
29 Ga0207426_1006891 3300025302 Bacteria 4841
30 Ga0207685_10001556 3300025905 Bacteria 4878
31 Ga0207685_10002062 3300025905 Bacteria 4488
32 Ga0207699_10017244 3300025906 Bacteria 3795
33 Ga0207663_10000642 3300025916 Bacteria 15537
34 Ga0207663_10014645 3300025916 Bacteria 4301
35 Ga0207700_10000855 3300025928 Bacteria 17540
36 Ga0207700_10056311 3300025928 Bacteria 2959
37 Ga0207700_10114542 3300025928 Bacteria 2176
38 Ga0207664_10005203 3300025929 Bacteria 8868
39 Ga0207664_10007837 3300025929 Bacteria 7420
40 Ga0207709_10082494 3300025935 Bacteria 2076
41 Ga0207665_10001245 3300025939 Bacteria 17164
42 Ga0207665_10004153 3300025939 Bacteria 9645
43 Ga0268266_10111694 3300028379 Bacteria 2422
44 Ga0307517_10018406 3300028786 Bacteria 9038
45 Ga0307515_10001178 3300028794 Bacteria 59820
46 Ga0307515_10032491 3300028794 Bacteria 8644
47 Ga0268256_1012094 3300030500 Bacteria 2690
48 Ga0307511_10000290 3300030521 Bacteria 52945
49 Ga0307511_10013038 3300030521 Bacteria 8133
50 Ga0307512_10034586 3300030522 Bacteria 4320
51 Ga0307512_10051900 3300030522 Bacteria 3276
52 Ga0307509_10028526 3300031507 Bacteria 6203
53 Ga0307508_10027112 3300031616 Bacteria 5189
54 Ga0307508_10085392 3300031616 Bacteria 2739
55 Ga0307514_10075956 3300031649 Bacteria 2504
56 Ga0307516_10036932 3300031730 Bacteria 4886
57 Ga0307413_10026141 3300031824 Bacteria 3213
58 Ga0307518_10074269 3300031838 Bacteria 2460
59 Ga0307507_10008151 3300033179 Bacteria 14702
60 Ga0307507_10028524 3300033179 Bacteria 5946
61 Ga0307507_10077214 3300033179 Bacteria 2964
62 Ga0307507_10087581 3300033179 Bacteria 2692
63 Ga0307510_10020532 3300033180 Bacteria 7718
64 Ga0307510_10105577 3300033180 Bacteria 2584
65 Ga0373937_0207520 3300036401 Bacteria 1842
66 Ga0395900_0368378 3300037418 Bacteria 1407
67 Ga0395898_0002689 3300037466 Bacteria 20565
68 Ga0439436_0000797 3300041404 Bacteria 8542
69 Ga0439439_0000346 3300041406 Bacteria 7540
70 Ga0439439_0010526 3300041406 Bacteria 2213
71 Ga0451791_0235236 3300041451 Bacteria 2069
72 Ga0451853_2553107 3300041512 Bacteria 2193
73 Ga0451853_3022956 3300041512 Bacteria 6398
74 Ga0439433_0000650 3300041999 Bacteria 6650
75 Ga0439449_0038123 3300042007 Bacteria 1787
76 Ga0439457_000182 3300042014 Bacteria 16460
77 Ga0439458_0002884 3300042157 Bacteria 4130
78 Ga0466972_0001697 3300044658 Bacteria 10784
79 Ga0466972_0006294 3300044658 Bacteria 5963
80 Ga0466972_0042130 3300044658 Bacteria 2221
81 Ga0466965_0027668 3300044683 Bacteria 2753
82 Ga0466966_0000700 3300044684 Bacteria 21325
83 Ga0466966_0002331 3300044684 Bacteria 12388
84 Ga0466961_0000641 3300044693 Bacteria 21975
85 Ga0466961_0014506 3300044693 Bacteria 5062
86 Ga0466963_0000385 3300044694 Bacteria 20153
87 Ga0466963_0001606 3300044694 Bacteria 12297
88 Ga0466963_0274717 3300044694 Bacteria 1184
89 Ga0466964_0000412 3300044706 Bacteria 12939
90 Ga0466971_0003731 3300044719 Bacteria 6516
91 Ga0466968_0005056 3300044735 Bacteria 4941
92 Ga0466957_0000167 3300044842 Bacteria 29271
93 Ga0466959_0001184 3300045049 Bacteria 15728
94 Ga0466959_0256143 3300045049 Bacteria 1206
95 Ga0466967_0002415 3300045976 Bacteria 11608
96 Ga0466967_0163002 3300045976 Bacteria 2094
97 Ga0495603_0011298 3300046455 Bacteria 5409
98 Ga0495603_0015251 3300046455 Bacteria 4649
99 Ga0495603_0018662 3300046455 Bacteria 4195
100 Ga0495629_0013143 3300046459 Bacteria 5978
101 Ga0495629_0023600 3300046459 Bacteria 4381
102 Ga0495629_0032516 3300046459 Bacteria 3692
103 Ga0495638_0048660 3300046460 Bacteria 2653
104 Ga0495651_0010176 3300046462 Bacteria 7222
105 Ga0495653_0041942 3300046463 Bacteria 3569
106 Ga0495582_0014667 3300046473 Bacteria 4306
107 Ga0495582_0021994 3300046473 Bacteria 3489
108 Ga0495605_0006556 3300046474 Bacteria 6677
109 Ga0495639_0009570 3300046475 Bacteria 4158
110 Ga0495662_0000147 3300046476 Bacteria 27603
111 Ga0495662_0004561 3300046476 Bacteria 6949
112 Ga0495662_0055874 3300046476 Bacteria 1907
113 Ga0495664_0001549 3300046477 Bacteria 12171
114 Ga0495594_0017285 3300046499 Bacteria 3809
115 Ga0495594_0071481 3300046499 Bacteria 1930
116 Ga0495594_0080728 3300046499 Bacteria 1815
117 Ga0495594_0086936 3300046499 Bacteria 1749
118 Ga0495606_0027944 3300046507 Bacteria 3988
119 Ga0495616_0010948 3300046513 Bacteria 5221
120 Ga0495618_0005790 3300046514 Bacteria 7511
121 Ga0495618_0112287 3300046514 Bacteria 1745
122 Ga0495620_0011951 3300046515 Bacteria 4510
123 Ga0495620_0019177 3300046515 Bacteria 3371
124 Ga0495628_0008670 3300046516 Bacteria 8705
125 Ga0495628_0047469 3300046516 Bacteria 3407
126 Ga0495628_0051188 3300046516 Bacteria 3265
127 Ga0495630_0028983 3300046517 Bacteria 4115
128 Ga0495643_0014312 3300046522 Bacteria 4722
129 Ga0495666_0014760 3300046526 Bacteria 3886
130 Ga0495642_0048048 3300046528 Bacteria 1749
131 Ga0495652_0180202 3300046529 Bacteria 1622
132 Ga0495640_0008290 3300046533 Bacteria 8148
133 Ga0495640_0023594 3300046533 Bacteria 4479
134 Ga0495640_0025212 3300046533 Bacteria 4316
135 Ga0495609_0013546 3300046538 Bacteria 3848
136 Ga0495597_0055860 3300046542 Bacteria 1730
137 Ga0495597_0057601 3300046542 Bacteria 1699
138 Ga0495645_0010775 3300046543 Bacteria 6422
139 Ga0495668_0098659 3300046616 Bacteria 1598
140 Ga0495634_0000435 3300046642 Bacteria 41620
141 Ga0495625_0006468 3300046660 Bacteria 10418
142 Ga0495625_0095616 3300046660 Bacteria 2048
143 Ga0495635_0017595 3300046663 Bacteria 4992
144 Ga0495661_0016427 3300046665 Bacteria 4906
145 Ga0495588_0015385 3300046674 Bacteria 3681
146 Ga0495588_0020913 3300046674 Bacteria 3219
147 Ga0495657_0012424 3300046675 Bacteria 6328
148 Ga0495657_0014280 3300046675 Bacteria 5833
149 Ga0495657_0038820 3300046675 Bacteria 3274
150 Ga0495657_0094588 3300046675 Bacteria 1911
151 Ga0495623_0056741 3300046679 Bacteria 2465
152 Ga0495646_0158513 3300046680 Bacteria 1254
153 Ga0495646_0183434 3300046680 Bacteria 1147
154 Ga0495658_0038547 3300046683 Bacteria 2647
155 Ga0495613_0005279 3300046689 Bacteria 9703
156 Ga0495613_0021362 3300046689 Bacteria 4826
157 Ga0495613_0051804 3300046689 Bacteria 3024
158 Ga0495613_0072113 3300046689 Bacteria 2517
159 Ga0495624_0059385 3300046690 Bacteria 2400
160 Ga0495624_0143291 3300046690 Bacteria 1463
161 Ga0495671_0008239 3300046692 Bacteria 5877
162 Ga0495600_0018560 3300046809 Bacteria 4432
163 Ga0495600_0028804 3300046809 Bacteria 3594
164 Ga0495600_0032060 3300046809 Bacteria 3409
165 Ga0495581_0000731 3300047315 Bacteria 17385
166 Ga0495604_0007014 3300047317 Bacteria 8932
167 Ga0495636_0000826 3300047318 Bacteria 11426
168 Ga0495636_0004249 3300047318 Bacteria 5620
169 Ga0495636_0027235 3300047318 Bacteria 2329
170 Ga0495674_0028790 3300047319 Bacteria 5061
171 Ga0495674_0385614 3300047319 Bacteria 1133
172 Ga0495672_0074479 3300047320 Bacteria 1912
173 Ga0495676_0070350 3300047321 Bacteria 2695
174 Ga0495676_0071665 3300047321 Bacteria 2663
175 Ga0495680_0005833 3300047322 Bacteria 11524
176 Ga0495683_0034214 3300047323 Bacteria 2584
177 Ga0495687_000771 3300047443 Bacteria 34685
178 Ga0495687_019381 3300047443 Bacteria 3341
179 Ga0495687_022495 3300047443 Bacteria 3025
180 Ga0495687_035300 3300047443 Bacteria 2249
181 Ga0495687_049770 3300047443 Bacteria 1789
182 Ga0495675_0024356 3300047444 Bacteria 3858
183 Ga0495675_0050227 3300047444 Bacteria 2651
184 Ga0495685_010968 3300047447 Bacteria 3048
185 Ga0495681_0003371 3300047470 Bacteria 11115
186 Ga0495684_0251090 3300047471 Bacteria 1287
187 Ga0495686_0098780 3300047472 Bacteria 1763
188 Ga0495593_0005356 3300047673 Bacteria 7588
189 Ga0495593_0019448 3300047673 Bacteria 3807
190 Ga0495602_0026706 3300048088 Bacteria 5564
191 Ga0495602_0114523 3300048088 Bacteria 2183
192 Ga0495614_0021661 3300048089 Bacteria 2774
193 Ga0495614_0093221 3300048089 Bacteria 1311
194 Ga0495626_0014690 3300048091 Bacteria 4029
195 Ga0496100_0280498 3300048903 Bacteria 1242
196 Ga0496104_0000305 3300048907 Bacteria 43740
197 Ga0496105_0020820 3300048908 Bacteria 5303
198 Ga0496108_0077318 3300048911 Bacteria 2814
199 Ga0496108_0151263 3300048911 Bacteria 2003
200 Ga0496109_0007820 3300048912 Bacteria 9057
201 Ga0496109_0088093 3300048912 Bacteria 2868
202 Ga0496112_0020215 3300048915 Bacteria 6306
203 Ga0496113_0015252 3300048916 Bacteria 5275
204 Ga0496121_0176047 3300048924 Bacteria 1549
205 Ga0501033_0212949 3300049570 Bacteria 1377
206 Ga0501034_0020439 3300049571 Bacteria 6760
207 Ga0501034_0141897 3300049571 Bacteria 2381
208 Ga0501034_0150493 3300049571 Bacteria 2303
209 Ga0501036_0106141 3300049572 Bacteria 2375
210 Ga0501037_0071278 3300049573 Bacteria 2528
211 Ga0501038_0036088 3300049574 Bacteria 4339
212 Ga0501039_0211261 3300049575 Bacteria 1526
213 Ga0501042_0034985 3300049578 Bacteria 3564
214 Ga0501043_0144973 3300049579 Bacteria 1859
215 Ga0501046_0043131 3300049580 Bacteria 3592
216 Ga0501047_0045437 3300049581 Bacteria 4247
217 Ga0501048_0092693 3300049582 Bacteria 2130
218 Ga0501080_0228908 3300049742 Bacteria 1699
219 Ga0501035_0109904 3300049822 Bacteria 2416
220 Ga0501035_0213727 3300049822 Bacteria 1649
221 Ga0501035_0224412 3300049822 Bacteria 1603
222 Ga0501044_0105982 3300049823 Bacteria 2823
223 Ga0501044_0167246 3300049823 Bacteria 2172
224 Ga0495601_0014196 3300053077 Bacteria 4800
225 Ga0500640_002969 3300053095 Bacteria 5774
226 Ga0466962_0001549 3300061719 Bacteria 10736
227 Ga0466962_0038025 3300061719 Bacteria 2305
228 2547408055 2547132111 Bacteria 8013147
229 2585308587 2582581313 Bacteria 10042643
230 2585313395 2582581314 Bacteria 11452267
231 2616695167 2616644814 Bacteria 11555299
232 2644262173 2643221647 Bacteria 10741251
233 2644437074 2643221678 Bacteria 9540101
234 2784588516 2784132148 Bacteria 8627943
235 2785369404 2784746768 Bacteria 10036182
236 2786670515 2786546132 Bacteria 10419719
237 2808841966 2808606359 Bacteria 9866990
238 2808920496 2808606375 Bacteria 9466072
239 2809232126 2808606448 Bacteria 8656184
240 2812358205 2811994879 Bacteria 9313447
241 2852636773 2852635781 Bacteria 8251373
242 2862182164 2862178590 Bacteria 8583590
243 2862285560 2862281513 Bacteria 9621493
244 2863404721 2863404153 Bacteria 9672205
245 2912720075 2912715099 Bacteria 9460473
246 2912724402 2912723979 Bacteria 8557534
247 2912761452 2912757875 Bacteria 7940295
248 2918507360 2918501144 Bacteria 8668083
249 2919469599 2919468124 Bacteria 9133025
250 2946067642 2946064051 Bacteria 8957905
251 2946075838 2946072368 Bacteria 8999607
252 2947229371 2947224130 Bacteria 9938529
253 2954007567 2954002825 Bacteria 9173742
254 2954386340 2954380949 Bacteria 10050426
255 2954676836 2954673503 Bacteria 9685905
256 2954687322 2954682443 Bacteria 9862841
257 2954697020 2954691527 Bacteria 10720516
258 2954705113 2954701450 Bacteria 10834262
259 2954726276 2954721474 Bacteria 10456478
260 2954735535 2954731030 Bacteria 10243860
261 2954745200 2954740390 Bacteria 10229294
262 2954754391 2954749733 Bacteria 10366972
263 2954764174 2954759201 Bacteria 9358192
264 3006397872 3006393351 Bacteria 6615579
265 3006500701 3006493962 Bacteria 8825450
266 8008567417 8008558824 Bacteria 10610750
267 8008578942 8008574985 Bacteria 7815457
268 8023626290 8023623736 Bacteria 8593882
269 8056831791 8056829672 Bacteria 9045328
270 JGI25406J46586_10025242
271 rootH2_10031023
272 Ga0006562J51391_1079578
273 Ga0070709_10000764
274 Ga0070714_100004707
275 Ga0070714_100004934
276 Ga0070714_100313651
277 Ga0070713_100016616
278 Ga0070713_100025607
279 Ga0070713_100107060
280 Ga0070710_10000570
281 Ga0070711_100000642
282 Ga0070711_100037659
283 Ga0081539_10000027
284 Ga0070717_10001066
285 Ga0070717_10024701
286 Ga0070717_10098738
287 Ga0070717_10428446
288 Ga0075363_100024031
289 Ga0070715_10007046
290 Ga0070716_100000606
291 Ga0070712_100026610
292 Ga0105251_10005712
293 Ga0105245_10355112
294 Ga0105243_10197777
295 Ga0182008_10003342
296 Ga0182007_10000436
297 Ga0209758_1002297
298 Ga0207426_1006891
299 Ga0207685_10001556
300 Ga0207685_10002062
301 Ga0207699_10017244
302 Ga0207663_10000642
303 Ga0207663_10014645
304 Ga0207700_10000855
305 Ga0207700_10056311
306 Ga0207700_10114542
307 Ga0207664_10005203
308 Ga0207664_10007837
309 Ga0207709_10082494
310 Ga0207665_10001245
311 Ga0207665_10004153
312 Ga0268266_10111694
313 Ga0307517_10018406
314 Ga0307515_10001178
315 Ga0307515_10032491
316 Ga0268256_1012094
317 Ga0307511_10000290
318 Ga0307511_10013038
319 Ga0307512_10034586
320 Ga0307512_10051900
321 Ga0307509_10028526
322 Ga0307508_10027112
323 Ga0307508_10085392
324 Ga0307514_10075956
325 Ga0307516_10036932
326 Ga0307413_10026141
327 Ga0307518_10074269
328 Ga0307507_10008151
329 Ga0307507_10028524
330 Ga0307507_10077214
331 Ga0307507_10087581
332 Ga0307510_10020532
333 Ga0307510_10105577
334 Ga0373937_0207520
335 Ga0395900_0368378
336 Ga0395898_0002689
337 Ga0439436_0000797
338 Ga0439439_0000346
339 Ga0439439_0010526
340 Ga0451791_0235236
341 Ga0451853_2553107
342 Ga0451853_3022956
343 Ga0439433_0000650
344 Ga0439449_0038123
345 Ga0439457_000182
346 Ga0439458_0002884
347 Ga0466972_0001697
348 Ga0466972_0006294
349 Ga0466972_0042130
350 Ga0466965_0027668
351 Ga0466966_0000700
352 Ga0466966_0002331
353 Ga0466961_0000641
354 Ga0466961_0014506
355 Ga0466963_0000385
356 Ga0466963_0001606
357 Ga0466963_0274717
358 Ga0466964_0000412
359 Ga0466971_0003731
360 Ga0466968_0005056
361 Ga0466957_0000167
362 Ga0466959_0001184
363 Ga0466959_0256143
364 Ga0466967_0002415
365 Ga0466967_0163002
366 Ga0495603_0011298
367 Ga0495603_0015251
368 Ga0495603_0018662
369 Ga0495629_0013143
370 Ga0495629_0023600
371 Ga0495629_0032516
372 Ga0495638_0048660
373 Ga0495651_0010176
374 Ga0495653_0041942
375 Ga0495582_0014667
376 Ga0495582_0021994
377 Ga0495605_0006556
378 Ga0495639_0009570
379 Ga0495662_0000147
380 Ga0495662_0004561
381 Ga0495662_0055874
382 Ga0495664_0001549
383 Ga0495594_0017285
384 Ga0495594_0071481
385 Ga0495594_0080728
386 Ga0495594_0086936
387 Ga0495606_0027944
388 Ga0495616_0010948
389 Ga0495618_0005790
390 Ga0495618_0112287
391 Ga0495620_0011951
392 Ga0495620_0019177
393 Ga0495628_0008670
394 Ga0495628_0047469
395 Ga0495628_0051188
396 Ga0495630_0028983
397 Ga0495643_0014312
398 Ga0495666_0014760
399 Ga0495642_0048048
400 Ga0495652_0180202
401 Ga0495640_0008290
402 Ga0495640_0023594
403 Ga0495640_0025212
404 Ga0495609_0013546
405 Ga0495597_0055860
406 Ga0495597_0057601
407 Ga0495645_0010775
408 Ga0495668_0098659
409 Ga0495634_0000435
410 Ga0495625_0006468
411 Ga0495625_0095616
412 Ga0495635_0017595
413 Ga0495661_0016427
414 Ga0495588_0015385
415 Ga0495588_0020913
416 Ga0495657_0012424
417 Ga0495657_0014280
418 Ga0495657_0038820
419 Ga0495657_0094588
420 Ga0495623_0056741
421 Ga0495646_0158513
422 Ga0495646_0183434
423 Ga0495658_0038547
424 Ga0495613_0005279
425 Ga0495613_0021362
426 Ga0495613_0051804
427 Ga0495613_0072113
428 Ga0495624_0059385
429 Ga0495624_0143291
430 Ga0495671_0008239
431 Ga0495600_0018560
432 Ga0495600_0028804
433 Ga0495600_0032060
434 Ga0495581_0000731
435 Ga0495604_0007014
436 Ga0495636_0000826
437 Ga0495636_0004249
438 Ga0495636_0027235
439 Ga0495674_0028790
440 Ga0495674_0385614
441 Ga0495672_0074479
442 Ga0495676_0070350
443 Ga0495676_0071665
444 Ga0495680_0005833
445 Ga0495683_0034214
446 Ga0495687_000771
447 Ga0495687_019381
448 Ga0495687_022495
449 Ga0495687_035300
450 Ga0495687_049770
451 Ga0495675_0024356
452 Ga0495675_0050227
453 Ga0495685_010968
454 Ga0495681_0003371
455 Ga0495684_0251090
456 Ga0495686_0098780
457 Ga0495593_0005356
458 Ga0495593_0019448
459 Ga0495602_0026706
460 Ga0495602_0114523
461 Ga0495614_0021661
462 Ga0495614_0093221
463 Ga0495626_0014690
464 Ga0496100_0280498
465 Ga0496104_0000305
466 Ga0496105_0020820
467 Ga0496108_0077318
468 Ga0496108_0151263
469 Ga0496109_0007820
470 Ga0496109_0088093
471 Ga0496112_0020215
472 Ga0496113_0015252
473 Ga0496121_0176047
474 Ga0501033_0212949
475 Ga0501034_0020439
476 Ga0501034_0141897
477 Ga0501034_0150493
478 Ga0501036_0106141
479 Ga0501037_0071278
480 Ga0501038_0036088
481 Ga0501039_0211261
482 Ga0501042_0034985
483 Ga0501043_0144973
484 Ga0501046_0043131
485 Ga0501047_0045437
486 Ga0501048_0092693
487 Ga0501080_0228908
488 Ga0501035_0109904
489 Ga0501035_0213727
490 Ga0501035_0224412
491 Ga0501044_0105982
492 Ga0501044_0167246
493 Ga0495601_0014196
494 Ga0500640_002969
495 Ga0466962_0001549
496 Ga0466962_0038025
497 2547408055
498 2585308587
499 2585313395
500 2616695167
501 2644262173
502 2644437074
503 2784588516
504 2785369404
505 2786670515
506 2808841966
507 2808920496
508 2809232126
509 2812358205
510 2852636773
511 2862182164
512 2862285560
513 2863404721
514 2912720075
515 2912724402
516 2912761452
517 2918507360
518 2919469599
519 2946067642
520 2946075838
521 2947229371
522 2954007567
523 2954386340
524 2954676836
525 2954687322
526 2954697020
527 2954705113
528 2954726276
529 2954735535
530 2954745200
531 2954754391
532 2954764174
533 3006397872
534 3006500701
535 8008567417
536 8008578942
537 8023626290
538 8056831791

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12840

HTH_20

Helix-turn-helix domain

246

294

0.96

PF01022

HTH_5

Bacterial regulatory protein, arsR family

249

293

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lb5-assembly1.cif.gz_A-2 crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.9476 263 309
1u2w-assembly2.cif.gz_C crystal structure of the staphylococcus aureus pi258 cadc 0.94 254 320
5zuo-assembly1.cif.gz_A crystal structure of bz junction in diverse sequence 0.9393 267 309
5yhy-assembly1.cif.gz_A structure of lactococcus lactis zitr, c30s mutant 0.9387 254 320
6pco-assembly2.cif.gz_C mechanism for regulation of dna binding of bordetella bronchiseptica bpsr by 6-hydroxynicotinic acid 0.9387 254 320
ID Description Score Start End Superfamily
af_Q58948_3_81_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9723 254 318 1.10.10.10
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9654 254 308 1.10.10.10
2x4hA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9518 268 316 1.10.10.10
af_Q58793_322_389_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9514 255 311 1.10.10.10
af_Q58793_245_317_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9483 250 310 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3R9VTA1-F1-model_v4 deleted 0.9991 247 318
AF-A0A6G3T7K1-F1-model_v4 Winged helix-turn-helix transcriptional regulator 0.9938 243 319 GO:0003700
AF-A0A0F5VIS1-F1-model_v4 ArsR family transcriptional regulator 0.9879 247 321
AF-A0A7W0YWD4-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9878 243 321 GO:0003700
AF-X8DTQ2-F1-model_v4 Bacterial regulatory, arsR family protein 0.985 245 321 GO:0003700

Map