F377185

General Info

Members Datasets Scaffolds Average Seq Length
270 164 246 339

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0000462|Ga0495625_0000462_53890_55056
Length 388
Sequence MSHCGKTCIFSSSEFKVSPVRKHLLLLKCRHGRKDKHEIHSKLLALVFNMELTYQPFELQLKHAFTIAKFSRTTTPVMLVQVKHEGFTGYGEASMVPYMGESHQSATEFLSKVDIGRFSYPFDFGSIISYLDSIAPGNPAVKAAIDIALHDLDGKIKGQPCWQLFGSNPALMPVTSFTIGIDTPEMIIKKVKEAEGFKVIKVKLGRDTDKELISTIRSVTNVPLYVDANQGWTDLQQSLDMTHWLQEQGVQLIEQPMLKTDPDSNAWLTERSPIPIIGDEAVQRFEDVEKAKGVYTGINIKLMKSGGMYEAKRMINKARELGLQIMIGCMTETSCAALAGLALAPQCDWVDLDGPFLVSNNPYQMPGFADGKYILNNDPGLGIHTNFN

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2738541283 Pedobacter sp. OK701 Isolate Unclassified
4 2738541284 Pedobacter sp. YR016 Isolate Unclassified
5 2738543023 Pedobacter sp. OK628 Isolate Unclassified
6 2739367651 Pedobacter sp. OK291 Isolate Unclassified
7 2739367656 Pedobacter sp. CF523 Isolate Unclassified
8 2739367663 Pedobacter sp. YR510 Isolate Unclassified
9 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
10 2818991437 Pedobacter terrae 518 Isolate Unclassified
11 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
12 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
13 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
14 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
15 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
16 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
17 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
18 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
19 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
20 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
21 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
22 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
23 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
24 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
25 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
26 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
27 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
28 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
29 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
30 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
31 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
32 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
33 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
34 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
35 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
36 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
37 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
38 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
39 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
40 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
41 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
42 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
43 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
44 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
45 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
46 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
47 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
48 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
49 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
50 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
51 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
52 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
53 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
54 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
55 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
56 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
57 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
81 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
82 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
83 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
84 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
85 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
86 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
87 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
88 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
89 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
90 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
93 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
94 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
117 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
122 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
123 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
134 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
135 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
136 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
137 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
138 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
139 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
140 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
141 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
144 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
145 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
146 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
149 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
150 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
151 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
152 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
157 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
158 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
159 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
160 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
161 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
162 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
163 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
164 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.11
Metatranscriptomes 0
Isolates 8.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.22
Nodule 0
Rhizoplane 0.37
Rhizosphere 76.3
Stem 0
Stem Tuber 0
Unclassified 11.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1065068 2162886007 Bacteria 22643
2 SwRhRL2b_contig_3539229 2162886007 Bacteria 1435
3 JGI24736J21556_1003137 3300001904 Bacteria 2879
4 JGI24740J21852_10040170 3300001979 Bacteria 1420
5 JGI24739J22299_10041054 3300001989 Bacteria 1542
6 JGI24737J22298_10000485 3300001990 Bacteria 13799
7 JGI24737J22298_10013136 3300001990 Bacteria 2698
8 JGI24735J21928_10000017 3300002067 Bacteria 114440
9 JGI25162J39368_1000055 3300002737 Bacteria 147236
10 JGI25164J39214_1000770 3300002772 Bacteria 11730
11 JGI25152J39213_1000129 3300002773 Bacteria 51667
12 JGI25150J39212_1000004 3300002774 Bacteria 417320
13 JGI25151J46595_10000002 3300003187 Bacteria 731381
14 JGI25165J46597_1000542 3300003214 Bacteria 34723
15 JGI25153J46596_10000037 3300003215 Bacteria 182199
16 rootH1_10066542 3300003316 Bacteria 3962
17 rootH2_10002219 3300003320 Bacteria 14914
18 rootH2_10007960 3300003320 Bacteria 49899
19 rootH2_10022272 3300003320 Bacteria 2036
20 rootH2_10095755 3300003320 Bacteria 1999
21 rootL2_10128297 3300003322 Bacteria 2181
22 rootH1_10001642 3300003323 Bacteria 53790
23 rootH1_10243890 3300003323 Bacteria 2683
24 rootH1_10275953 3300003323 Bacteria 3836
25 Ga0055530_10002742 3300003791 Bacteria 10901
26 Ga0065714_10064812 3300005288 Bacteria 18115
27 Ga0065714_10070480 3300005288 Bacteria 3797
28 Ga0065704_10000252 3300005289 Bacteria 51507
29 Ga0070676_10000205 3300005328 Bacteria 25133
30 Ga0068868_100005942 3300005338 Bacteria 8607
31 Ga0070660_100055108 3300005339 Bacteria 3072
32 Ga0070660_100058926 3300005339 Unclassified 2977
33 Ga0070673_100004899 3300005364 Bacteria 8525
34 Ga0070659_100015562 3300005366 Bacteria 5698
35 Ga0070663_100002870 3300005455 Bacteria 9802
36 Ga0070662_100000062 3300005457 Bacteria 57251
37 Ga0068853_100014963 3300005539 Bacteria 6373
38 Ga0068853_100310618 3300005539 Bacteria 1459
39 Ga0070665_100000017 3300005548 Bacteria 448013
40 Ga0068855_100000306 3300005563 Bacteria 60933
41 Ga0068855_100027024 3300005563 Bacteria 6866
42 Ga0068855_100042306 3300005563 Bacteria 5398
43 Ga0068855_100048342 3300005563 Bacteria 5020
44 Ga0068852_100003165 3300005616 Bacteria 11486
45 Ga0068870_10124639 3300005840 Bacteria 1488
46 Ga0068858_100100244 3300005842 Bacteria 2701
47 Ga0075366_10005403 3300006195 Bacteria 6922
48 Ga0075366_10009911 3300006195 Bacteria 5332
49 Ga0075366_10030228 3300006195 Bacteria 3184
50 Ga0097621_100004568 3300006237 Bacteria 9660
51 Ga0068871_100000080 3300006358 Bacteria 53930
52 Ga0068865_100001052 3300006881 Bacteria 15844
53 Ga0105244_10069230 3300009036 Bacteria 1762
54 Ga0105240_10000515 3300009093 Bacteria 71183
55 Ga0105240_10010684 3300009093 Bacteria 12883
56 Ga0105240_10018105 3300009093 Bacteria 9472
57 Ga0105240_10047750 3300009093 Bacteria 5416
58 Ga0105240_10083749 3300009093 Bacteria 3912
59 Ga0105240_10376182 3300009093 Bacteria 1605
60 Ga0105241_10000282 3300009174 Bacteria 37799
61 Ga0105241_10282607 3300009174 Bacteria 1418
62 Ga0105242_10006840 3300009176 Bacteria 8790
63 Ga0105237_10000327 3300009545 Bacteria 66993
64 Ga0105237_10000400 3300009545 Bacteria 61626
65 Ga0105237_10003619 3300009545 Bacteria 18250
66 Ga0105237_10007738 3300009545 Bacteria 11732
67 Ga0105237_10051133 3300009545 Bacteria 4151
68 Ga0105237_10200285 3300009545 Bacteria 1996
69 Ga0105238_10007912 3300009551 Bacteria 10638
70 Ga0105239_10000014 3300010375 Bacteria 325391
71 Ga0105239_10000764 3300010375 Bacteria 45433
72 Ga0157373_10000152 3300013100 Bacteria 55831
73 Ga0157373_10000366 3300013100 Bacteria 36257
74 Ga0157373_10006493 3300013100 Bacteria 8728
75 Ga0157373_10016808 3300013100 Bacteria 5334
76 Ga0157373_10021478 3300013100 Bacteria 4688
77 Ga0157371_10000121 3300013102 Bacteria 118793
78 Ga0157371_10000707 3300013102 Bacteria 39149
79 Ga0157371_10002932 3300013102 Bacteria 15914
80 Ga0157371_10005041 3300013102 Bacteria 11298
81 Ga0157370_10014422 3300013104 Bacteria 8079
82 Ga0157370_10020876 3300013104 Bacteria 6534
83 Ga0157370_10030993 3300013104 Bacteria 5236
84 Ga0157370_10054833 3300013104 Bacteria 3800
85 Ga0157370_10058465 3300013104 Bacteria 3664
86 Ga0157369_10000038 3300013105 Bacteria 189078
87 Ga0157369_10000101 3300013105 Bacteria 118683
88 Ga0157369_10209229 3300013105 Bacteria 2045
89 Ga0157374_10000848 3300013296 Bacteria 26742
90 Ga0157374_10001470 3300013296 Bacteria 19891
91 Ga0157374_10003719 3300013296 Bacteria 12823
92 Ga0157378_10009343 3300013297 Bacteria 8541
93 Ga0163162_10000051 3300013306 Bacteria 117695
94 Ga0163162_10000102 3300013306 Bacteria 76836
95 Ga0163162_10025964 3300013306 Bacteria 5789
96 Ga0163162_10128143 3300013306 Bacteria 2646
97 Ga0157372_10000041 3300013307 Bacteria 158494
98 Ga0157372_10000075 3300013307 Bacteria 105528
99 Ga0157372_10000621 3300013307 Bacteria 38766
100 Ga0157372_10000856 3300013307 Bacteria 33028
101 Ga0157372_10202454 3300013307 Bacteria 2300
102 Ga0157375_10068373 3300013308 Bacteria 3554
103 Ga0182008_10000047 3300014497 Bacteria 108181
104 Ga0182008_10000117 3300014497 Bacteria 60070
105 Ga0182008_10000797 3300014497 Bacteria 22049
106 Ga0157377_10181840 3300014745 Bacteria 1323
107 Ga0182006_1000131 3300015261 Bacteria 80570
108 Ga0182006_1000930 3300015261 Bacteria 19521
109 Ga0182006_1002003 3300015261 Bacteria 11472
110 Ga0182007_10000059 3300015262 Bacteria 88462
111 Ga0182007_10008092 3300015262 Bacteria 4340
112 Ga0183373_1002 3300015682 Bacteria 990153
113 Ga0163161_10004111 3300017792 Bacteria 10183
114 Ga0163161_10032481 3300017792 Bacteria 3727
115 Ga0163161_10231088 3300017792 Bacteria 1435
116 Ga0207427_100060 3300025231 Bacteria 186274
117 Ga0209437_100021 3300025233 Bacteria 646400
118 Ga0209437_100130 3300025233 Bacteria 183731
119 Ga0207425_1000003 3300025245 Bacteria 1145342
120 Ga0209026_1006934 3300025250 Bacteria 2661
121 Ga0209129_1000022 3300025258 Bacteria 440876
122 Ga0209233_1000035 3300025261 Bacteria 568478
123 Ga0209233_1002832 3300025261 Bacteria 6225
124 Ga0209233_1002901 3300025261 Bacteria 6126
125 Ga0209455_1002214 3300025272 Bacteria 7691
126 Ga0209676_1000022 3300025292 Bacteria 605659
127 Ga0209025_1000007 3300025294 Bacteria 1145109
128 Ga0209758_1000012 3300025297 Bacteria 949866
129 Ga0209050_1000020 3300025298 Bacteria 605671
130 Ga0207655_1058324 3300025728 Bacteria 1510
131 Ga0207647_10000012 3300025904 Bacteria 152879
132 Ga0207647_10001842 3300025904 Bacteria 16270
133 Ga0207647_10011456 3300025904 Bacteria 6218
134 Ga0207645_10012611 3300025907 Bacteria 5730
135 Ga0207643_10100014 3300025908 Bacteria 1700
136 Ga0207705_10000102 3300025909 Bacteria 98105
137 Ga0207654_10004075 3300025911 Bacteria 7361
138 Ga0207654_10017316 3300025911 Bacteria 3764
139 Ga0207654_10096768 3300025911 Bacteria 1811
140 Ga0207654_10251245 3300025911 Bacteria 1185
141 Ga0207695_10000267 3300025913 Bacteria 131133
142 Ga0207695_10004146 3300025913 Bacteria 19899
143 Ga0207695_10015376 3300025913 Bacteria 9008
144 Ga0207695_10030602 3300025913 Bacteria 5922
145 Ga0207671_10000244 3300025914 Bacteria 81258
146 Ga0207671_10001340 3300025914 Bacteria 28803
147 Ga0207671_10001932 3300025914 Bacteria 22972
148 Ga0207671_10013311 3300025914 Bacteria 6558
149 Ga0207671_10028776 3300025914 Bacteria 4151
150 Ga0207657_10078909 3300025919 Unclassified 2771
151 Ga0207657_10118929 3300025919 Bacteria 2175
152 Ga0207706_10000430 3300025933 Bacteria 44993
153 Ga0207686_10031955 3300025934 Bacteria 3129
154 Ga0207704_10000597 3300025938 Bacteria 15962
155 Ga0207661_10274478 3300025944 Bacteria 1505
156 Ga0207667_10005997 3300025949 Bacteria 14785
157 Ga0207667_10024589 3300025949 Bacteria 6609
158 Ga0207667_10036732 3300025949 Bacteria 5246
159 Ga0207677_10253811 3300026023 Bacteria 1430
160 Ga0207639_10025264 3300026041 Bacteria 4307
161 Ga0207639_10087200 3300026041 Bacteria 2487
162 Ga0207678_10025499 3300026067 Bacteria 5161
163 Ga0207702_10017181 3300026078 Bacteria 5985
164 Ga0207648_10000886 3300026089 Bacteria 33749
165 Ga0207698_10437651 3300026142 Bacteria 1259
166 Ga0268266_10000037 3300028379 Bacteria 342368
167 Ga0307515_10000510 3300028794 Bacteria 92702
168 Ga0307515_10023106 3300028794 Bacteria 10920
169 Ga0307515_10061637 3300028794 Bacteria 5315
170 Ga0307516_10173354 3300031730 Bacteria 1896
171 Ga0307412_10000001 3300031911 Bacteria 822691
172 Ga0307416_100000005 3300032002 Bacteria 477728
173 Ga0307414_10007537 3300032004 Bacteria 6116
174 Ga0307414_10014900 3300032004 Bacteria 4680
175 Ga0307414_10051121 3300032004 Bacteria 2867
176 Ga0307507_10000144 3300033179 Bacteria 123842
177 Ga0307510_10000249 3300033180 Bacteria 48754
178 Ga0395899_0000024 3300037312 Bacteria 357402
179 Ga0395899_0000050 3300037312 Bacteria 224591
180 Ga0395899_0002573 3300037312 Bacteria 14645
181 Ga0395900_0080844 3300037418 Bacteria 3340
182 Ga0395900_0099543 3300037418 Bacteria 2986
183 Ga0395898_0021703 3300037466 Bacteria 6508
184 Ga0395905_0008068 3300037471 Bacteria 10400
185 Ga0439448_0014557 3300042005 Bacteria 2374
186 Ga0466966_0144682 3300044684 Bacteria 1451
187 Ga0466961_0004369 3300044693 Bacteria 8858
188 Ga0466959_0184558 3300045049 Bacteria 1458
189 Ga0495627_022979 3300046453 Bacteria 2047
190 Ga0495638_0108457 3300046460 Bacteria 1652
191 Ga0495650_0000050 3300046471 Bacteria 318894
192 Ga0495585_0000100 3300046492 Bacteria 91669
193 Ga0495585_0000323 3300046492 Bacteria 47094
194 Ga0495607_0102858 3300046501 Bacteria 1527
195 Ga0495583_0031832 3300046506 Bacteria 2552
196 Ga0495606_0000505 3300046507 Bacteria 63449
197 Ga0495606_0011444 3300046507 Bacteria 7237
198 Ga0495606_0038076 3300046507 Bacteria 3257
199 Ga0495610_0000037 3300046512 Bacteria 186354
200 Ga0495610_0000167 3300046512 Bacteria 73458
201 Ga0495616_0000987 3300046513 Bacteria 20375
202 Ga0495616_0002517 3300046513 Bacteria 12118
203 Ga0495631_0040776 3300046518 Bacteria 2056
204 Ga0495637_0008506 3300046520 Bacteria 5036
205 Ga0495637_0078274 3300046520 Bacteria 1322
206 Ga0495648_0014730 3300046524 Bacteria 5703
207 Ga0495648_0035760 3300046524 Bacteria 3215
208 Ga0495609_0002073 3300046538 Bacteria 12619
209 Ga0495622_0014788 3300046557 Bacteria 3627
210 Ga0495633_0000004 3300046558 Bacteria 370781
211 Ga0495633_0003949 3300046558 Bacteria 9649
212 Ga0495633_0030766 3300046558 Bacteria 2606
213 Ga0495668_0000011 3300046616 Bacteria 472186
214 Ga0495625_0000077 3300046660 Bacteria 163166
215 Ga0495625_0000462 3300046660 Bacteria 60985
216 Ga0495625_0005670 3300046660 Bacteria 11312
217 Ga0495625_0016369 3300046660 Bacteria 5838
218 Ga0495625_0018309 3300046660 Bacteria 5471
219 Ga0495625_0024513 3300046660 Bacteria 4591
220 Ga0495625_0058035 3300046660 Bacteria 2750
221 Ga0495625_0059070 3300046660 Bacteria 2722
222 Ga0495625_0086347 3300046660 Bacteria 2177
223 Ga0495661_0001381 3300046665 Bacteria 20445
224 Ga0495661_0014597 3300046665 Bacteria 5261
225 Ga0495669_0085056 3300046684 Bacteria 1455
226 Ga0495649_0000011 3300046694 Bacteria 416695
227 Ga0495649_0041341 3300046694 Bacteria 2522
228 Ga0495683_0006900 3300047323 Bacteria 6172
229 Ga0495687_000556 3300047443 Bacteria 44028
230 Ga0495687_001943 3300047443 Bacteria 17724
231 Ga0495686_0000249 3300047472 Bacteria 96604
232 Ga0495686_0000748 3300047472 Bacteria 43100
233 Ga0495686_0021232 3300047472 Bacteria 4317
234 Ga0495686_0032767 3300047472 Bacteria 3361
235 Ga0496122_0002587 3300048925 Bacteria 25370
236 Ga0496123_0003272 3300048926 Bacteria 18352
237 Ga0495678_065050 3300049459 Bacteria 1355
238 nmdc:mga0k408_1308_c1 3300050493 Bacteria 13446
239 nmdc:mga0k408_230_c1 3300050493 Bacteria 6347
240 Ga0500651_0000372 3300053093 Bacteria 24586
241 Ga0500614_014888 3300053123 Bacteria 1729
242 Ga0500618_000011 3300053125 Bacteria 198091
243 Ga0500642_0014225 3300053130 Bacteria 2954
244 Ga0500564_044394 3300053138 Bacteria 2042
245 Ga0500622_0001513 3300053156 Bacteria 18450
246 Ga0500624_000334 3300053157 Bacteria 15832

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046660 Ga0495625_0086347 Ga0495625_0086347_225_1232 313
2 3300009036 Ga0105244_10069230 Ga0105244_100692302 315
3 3300015261 Ga0182006_1000131 Ga0182006_100013128 315
4 3300032004 Ga0307414_10014900 Ga0307414_100149002 316
5 3300053156 Ga0500622_0001513 Ga0500622_0001513_14487_15494 319
6 iso_pu_bacteria 2599185184 2599480665 332
7 iso_pu_bacteria 2904445276 2904447168 332
8 iso_pu_bacteria 2919437846 2919439502 332
9 iso_pu_bacteria 2928078545 2928081561 332
10 iso_pu_bacteria 2932082852 2932085235 332
11 iso_pu_bacteria 2852623160 2852627109 333
12 iso_pu_bacteria 2928147474 2928150412 333
13 3300003322 rootL2_10128297 rootL2_101282972 335
14 3300005842 Ga0068858_100100244 Ga0068858_1001002442 335
15 3300006195 Ga0075366_10009911 Ga0075366_100099114 335
16 3300009174 Ga0105241_10282607 Ga0105241_102826071 335
17 3300013296 Ga0157374_10003719 Ga0157374_100037196 335
18 3300025911 Ga0207654_10251245 Ga0207654_102512451 335
19 3300028794 Ga0307515_10000510 Ga0307515_100005102 335
20 3300033179 Ga0307507_10000144 Ga0307507_1000014412 335
21 3300045049 Ga0466959_0184558 Ga0466959_0184558_32_1096 335
22 3300046558 Ga0495633_0000004 Ga0495633_0000004_288946_289953 335
23 3300046660 Ga0495625_0059070 Ga0495625_0059070_606_1679 335
24 3300050493 nmdc:mga0k408_1308_c1 nmdc:mga0k408_1308_c1_1749_2756 335
25 iso_pu_bacteria 2977232053 2977235263 335
26 3300001990 JGI24737J22298_10000485 JGI24737J22298_1000048513 336
27 3300002067 JGI24735J21928_10000017 JGI24735J21928_1000001723 336
28 3300003316 rootH1_10066542 rootH1_100665422 336
29 3300003320 rootH2_10007960 rootH2_1000796026 336
30 3300003323 rootH1_10001642 rootH1_1000164251 336
31 3300005539 Ga0068853_100310618 Ga0068853_1003106182 336
32 3300005548 Ga0070665_100000017 Ga0070665_100000017241 336
33 3300005563 Ga0068855_100000306 Ga0068855_1000003069 336
34 3300005563 Ga0068855_100027024 Ga0068855_1000270244 336
35 3300005563 Ga0068855_100042306 Ga0068855_1000423064 336
36 3300005563 Ga0068855_100048342 Ga0068855_1000483423 336
37 3300005840 Ga0068870_10124639 Ga0068870_101246392 336
38 3300006195 Ga0075366_10030228 Ga0075366_100302284 336
39 3300009093 Ga0105240_10010684 Ga0105240_100106847 336
40 3300009093 Ga0105240_10047750 Ga0105240_100477503 336
41 3300009545 Ga0105237_10007738 Ga0105237_100077386 336
42 3300009545 Ga0105237_10051133 Ga0105237_100511333 336
43 3300009545 Ga0105237_10200285 Ga0105237_102002852 336
44 3300010375 Ga0105239_10000764 Ga0105239_1000076441 336
45 3300013104 Ga0157370_10054833 Ga0157370_100548333 336
46 3300013306 Ga0163162_10000051 Ga0163162_1000005149 336
47 3300013306 Ga0163162_10025964 Ga0163162_100259646 336
48 3300013306 Ga0163162_10128143 Ga0163162_101281432 336
49 3300013307 Ga0157372_10000856 Ga0157372_1000085623 336
50 3300013308 Ga0157375_10068373 Ga0157375_100683735 336
51 3300014497 Ga0182008_10000117 Ga0182008_1000011758 336
52 3300017792 Ga0163161_10032481 Ga0163161_100324814 336
53 3300025272 Ga0209455_1002214 Ga0209455_10022143 336
54 3300025908 Ga0207643_10100014 Ga0207643_101000141 336
55 3300025909 Ga0207705_10000102 Ga0207705_1000010289 336
56 3300025911 Ga0207654_10096768 Ga0207654_100967682 336
57 3300025913 Ga0207695_10004146 Ga0207695_100041468 336
58 3300025913 Ga0207695_10030602 Ga0207695_100306026 336
59 3300025914 Ga0207671_10001340 Ga0207671_1000134015 336
60 3300025914 Ga0207671_10013311 Ga0207671_100133114 336
61 3300025914 Ga0207671_10028776 Ga0207671_100287764 336
62 3300025949 Ga0207667_10005997 Ga0207667_100059979 336
63 3300025949 Ga0207667_10024589 Ga0207667_100245894 336
64 3300025949 Ga0207667_10036732 Ga0207667_100367323 336
65 3300026041 Ga0207639_10025264 Ga0207639_100252642 336
66 3300026078 Ga0207702_10017181 Ga0207702_100171814 336
67 3300028379 Ga0268266_10000037 Ga0268266_1000003777 336
68 3300046460 Ga0495638_0108457 Ga0495638_0108457_588_1598 336
69 3300046471 Ga0495650_0000050 Ga0495650_0000050_158617_159627 336
70 3300046492 Ga0495585_0000100 Ga0495585_0000100_80142_81152 336
71 3300046506 Ga0495583_0031832 Ga0495583_0031832_609_1619 336
72 3300046507 Ga0495606_0000505 Ga0495606_0000505_34959_35969 336
73 3300046507 Ga0495606_0038076 Ga0495606_0038076_711_1721 336
74 3300046512 Ga0495610_0000167 Ga0495610_0000167_5820_6830 336
75 3300046513 Ga0495616_0000987 Ga0495616_0000987_7617_8627 336
76 3300046513 Ga0495616_0002517 Ga0495616_0002517_9563_10573 336
77 3300046520 Ga0495637_0078274 Ga0495637_0078274_64_1140 336
78 3300046524 Ga0495648_0014730 Ga0495648_0014730_3348_4358 336
79 3300046558 Ga0495633_0003949 Ga0495633_0003949_2363_3373 336
80 3300046660 Ga0495625_0000077 Ga0495625_0000077_108518_109528 336
81 3300046660 Ga0495625_0016369 Ga0495625_0016369_4311_5321 336
82 3300046660 Ga0495625_0018309 Ga0495625_0018309_813_1823 336
83 3300046660 Ga0495625_0058035 Ga0495625_0058035_316_1326 336
84 3300046665 Ga0495661_0001381 Ga0495661_0001381_2521_3531 336
85 3300046665 Ga0495661_0014597 Ga0495661_0014597_3319_4329 336
86 3300046694 Ga0495649_0000011 Ga0495649_0000011_201558_202568 336
87 3300047443 Ga0495687_000556 Ga0495687_000556_5717_6775 336
88 3300047472 Ga0495686_0000249 Ga0495686_0000249_55189_56199 336
89 3300047472 Ga0495686_0000748 Ga0495686_0000748_10034_11044 336
90 3300047472 Ga0495686_0021232 Ga0495686_0021232_476_1486 336
91 3300047472 Ga0495686_0032767 Ga0495686_0032767_919_1929 336
92 3300049459 Ga0495678_065050 Ga0495678_065050_164_1174 336
93 3300053138 Ga0500564_044394 Ga0500564_044394_364_1374 336
94 3300053157 Ga0500624_000334 Ga0500624_000334_4999_6009 336
95 iso_pu_bacteria 2884933994 2884935158 336
96 3300001904 JGI24736J21556_1003137 JGI24736J21556_10031372 337
97 3300001979 JGI24740J21852_10040170 JGI24740J21852_100401702 337
98 3300001989 JGI24739J22299_10041054 JGI24739J22299_100410541 337
99 3300001990 JGI24737J22298_10013136 JGI24737J22298_100131362 337
100 3300002772 JGI25164J39214_1000770 JGI25164J39214_10007709 337
101 3300003214 JGI25165J46597_1000542 JGI25165J46597_10005428 337
102 3300003320 rootH2_10002219 rootH2_1000221912 337
103 3300003320 rootH2_10022272 rootH2_100222721 337
104 3300003320 rootH2_10095755 rootH2_100957551 337
105 3300003323 rootH1_10275953 rootH1_102759532 337
106 3300005288 Ga0065714_10070480 Ga0065714_100704802 337
107 3300005328 Ga0070676_10000205 Ga0070676_100002057 337
108 3300005338 Ga0068868_100005942 Ga0068868_1000059424 337
109 3300005339 Ga0070660_100055108 Ga0070660_1000551082 337
110 3300005339 Ga0070660_100058926 Ga0070660_1000589262 337
111 3300005364 Ga0070673_100004899 Ga0070673_1000048996 337
112 3300005366 Ga0070659_100015562 Ga0070659_1000155625 337
113 3300005455 Ga0070663_100002870 Ga0070663_1000028702 337
114 3300005457 Ga0070662_100000062 Ga0070662_10000006216 337
115 3300005539 Ga0068853_100014963 Ga0068853_1000149635 337
116 3300005616 Ga0068852_100003165 Ga0068852_10000316510 337
117 3300006195 Ga0075366_10005403 Ga0075366_100054033 337
118 3300006237 Ga0097621_100004568 Ga0097621_1000045686 337
119 3300006358 Ga0068871_100000080 Ga0068871_10000008012 337
120 3300006881 Ga0068865_100001052 Ga0068865_10000105212 337
121 3300009093 Ga0105240_10000515 Ga0105240_1000051556 337
122 3300009093 Ga0105240_10018105 Ga0105240_100181055 337
123 3300009093 Ga0105240_10376182 Ga0105240_103761822 337
124 3300009174 Ga0105241_10000282 Ga0105241_1000028233 337
125 3300009176 Ga0105242_10006840 Ga0105242_100068404 337
126 3300009545 Ga0105237_10000400 Ga0105237_100004008 337
127 3300009545 Ga0105237_10003619 Ga0105237_100036196 337
128 3300009551 Ga0105238_10007912 Ga0105238_100079122 337
129 3300010375 Ga0105239_10000014 Ga0105239_1000001499 337
130 3300013100 Ga0157373_10000152 Ga0157373_1000015246 337
131 3300013100 Ga0157373_10006493 Ga0157373_100064936 337
132 3300013100 Ga0157373_10021478 Ga0157373_100214784 337
133 3300013102 Ga0157371_10000121 Ga0157371_1000012120 337
134 3300013102 Ga0157371_10002932 Ga0157371_1000293213 337
135 3300013104 Ga0157370_10030993 Ga0157370_100309935 337
136 3300013105 Ga0157369_10000101 Ga0157369_1000010120 337
137 3300013105 Ga0157369_10209229 Ga0157369_102092292 337
138 3300013296 Ga0157374_10000848 Ga0157374_1000084814 337
139 3300013296 Ga0157374_10001470 Ga0157374_1000147018 337
140 3300013297 Ga0157378_10009343 Ga0157378_100093434 337
141 3300013307 Ga0157372_10000041 Ga0157372_1000004117 337
142 3300013307 Ga0157372_10000075 Ga0157372_100000757 337
143 3300013307 Ga0157372_10000621 Ga0157372_100006214 337
144 3300013307 Ga0157372_10202454 Ga0157372_102024542 337
145 3300014745 Ga0157377_10181840 Ga0157377_101818401 337
146 3300025231 Ga0207427_100060 Ga0207427_1000609 337
147 3300025233 Ga0209437_100021 Ga0209437_100021405 337
148 3300025261 Ga0209233_1000035 Ga0209233_1000035233 337
149 3300025261 Ga0209233_1002832 Ga0209233_10028322 337
150 3300025261 Ga0209233_1002901 Ga0209233_10029014 337
151 3300025904 Ga0207647_10000012 Ga0207647_1000001245 337
152 3300025904 Ga0207647_10001842 Ga0207647_100018424 337
153 3300025904 Ga0207647_10011456 Ga0207647_100114564 337
154 3300025907 Ga0207645_10012611 Ga0207645_100126113 337
155 3300025911 Ga0207654_10004075 Ga0207654_100040757 337
156 3300025911 Ga0207654_10017316 Ga0207654_100173165 337
157 3300025913 Ga0207695_10000267 Ga0207695_1000026764 337
158 3300025913 Ga0207695_10015376 Ga0207695_100153767 337
159 3300025914 Ga0207671_10000244 Ga0207671_1000024438 337
160 3300025919 Ga0207657_10078909 Ga0207657_100789093 337
161 3300025919 Ga0207657_10118929 Ga0207657_101189292 337
162 3300025933 Ga0207706_10000430 Ga0207706_100004305 337
163 3300025934 Ga0207686_10031955 Ga0207686_100319552 337
164 3300025938 Ga0207704_10000597 Ga0207704_1000059711 337
165 3300025944 Ga0207661_10274478 Ga0207661_102744781 337
166 3300026023 Ga0207677_10253811 Ga0207677_102538112 337
167 3300026041 Ga0207639_10087200 Ga0207639_100872002 337
168 3300026067 Ga0207678_10025499 Ga0207678_100254992 337
169 3300026089 Ga0207648_10000886 Ga0207648_1000088623 337
170 3300028794 Ga0307515_10061637 Ga0307515_100616375 337
171 3300031730 Ga0307516_10173354 Ga0307516_101733542 337
172 3300033180 Ga0307510_10000249 Ga0307510_1000024928 337
173 3300037312 Ga0395899_0000024 Ga0395899_0000024_146050_147063 337
174 3300037312 Ga0395899_0000050 Ga0395899_0000050_154707_155780 337
175 3300037312 Ga0395899_0002573 Ga0395899_0002573_11434_12447 337
176 3300037418 Ga0395900_0080844 Ga0395900_0080844_1564_2577 337
177 3300037418 Ga0395900_0099543 Ga0395900_0099543_23_1036 337
178 3300037466 Ga0395898_0021703 Ga0395898_0021703_4497_5510 337
179 3300037471 Ga0395905_0008068 Ga0395905_0008068_8748_9761 337
180 3300042005 Ga0439448_0014557 Ga0439448_0014557_1092_2105 337
181 3300044684 Ga0466966_0144682 Ga0466966_0144682_339_1352 337
182 3300044693 Ga0466961_0004369 Ga0466961_0004369_855_1868 337
183 3300046507 Ga0495606_0011444 Ga0495606_0011444_2442_3455 337
184 3300046518 Ga0495631_0040776 Ga0495631_0040776_851_1864 337
185 3300046660 Ga0495625_0005670 Ga0495625_0005670_611_1624 337
186 3300046660 Ga0495625_0024513 Ga0495625_0024513_3445_4458 337
187 3300046684 Ga0495669_0085056 Ga0495669_0085056_76_1089 337
188 3300046694 Ga0495649_0041341 Ga0495649_0041341_1470_2483 337
189 3300047323 Ga0495683_0006900 Ga0495683_0006900_4681_5694 337
190 3300047443 Ga0495687_001943 Ga0495687_001943_3605_4618 337
191 3300050493 nmdc:mga0k408_230_c1 nmdc:mga0k408_230_c1_4026_5045 337
192 3300053125 Ga0500618_000011 Ga0500618_000011_3409_4422 337
193 3300053130 Ga0500642_0014225 Ga0500642_0014225_810_1823 337
194 3300025250 Ga0209026_1006934 Ga0209026_10069342 338
195 3300002737 JGI25162J39368_1000055 JGI25162J39368_1000055144 339
196 3300003323 rootH1_10243890 rootH1_102438903 339
197 3300025233 Ga0209437_100130 Ga0209437_100130176 339
198 3300046492 Ga0495585_0000323 Ga0495585_0000323_36862_37881 339
199 3300046524 Ga0495648_0035760 Ga0495648_0035760_2080_3099 339
200 3300046538 Ga0495609_0002073 Ga0495609_0002073_6035_7054 339
201 3300046557 Ga0495622_0014788 Ga0495622_0014788_1390_2409 339
202 3300046616 Ga0495668_0000011 Ga0495668_0000011_324612_325631 339
203 3300046660 Ga0495625_0000462 Ga0495625_0000462_53890_55056 339
204 3300053123 Ga0500614_014888 Ga0500614_014888_80_1099 339
205 iso_pu_bacteria 2739367651 2739591301 339
206 iso_pu_bacteria 2739367656 2739614888 339
207 iso_pu_bacteria 2739367663 2739646040 339
208 iso_pu_bacteria 2818991437 2819549698 339
209 iso_pu_bacteria 2849281842 2849283435 339
210 iso_pu_bacteria 2857627736 2857628274 339
211 iso_pu_bacteria 2902048731 2902049676 339
212 iso_pu_bacteria 2945997725 2945998210 339
213 iso_pu_bacteria 2738541283 2738759221 340
214 iso_pu_bacteria 2738541284 2738761655 341
215 iso_pu_bacteria 2738543023 2739304273 341
216 iso_pu_bacteria 2775506987 2776615696 341
217 iso_pu_bacteria 2852627209 2852627933 341
218 iso_pu_bacteria 2919186247 2919190884 341
219 iso_pu_bacteria 2939664404 2939668906 341
220 3300028794 Ga0307515_10023106 Ga0307515_100231065 342
221 3300002773 JGI25152J39213_1000129 JGI25152J39213_100012927 343
222 3300002774 JGI25150J39212_1000004 JGI25150J39212_100000459 343
223 3300003187 JGI25151J46595_10000002 JGI25151J46595_10000002566 343
224 3300003215 JGI25153J46596_10000037 JGI25153J46596_1000003760 343
225 3300003791 Ga0055530_10002742 Ga0055530_100027422 343
226 3300005288 Ga0065714_10064812 Ga0065714_1006481213 343
227 3300013100 Ga0157373_10016808 Ga0157373_100168085 343
228 3300013104 Ga0157370_10014422 Ga0157370_100144227 343
229 3300013105 Ga0157369_10000038 Ga0157369_10000038147 343
230 3300013306 Ga0163162_10000102 Ga0163162_1000010243 343
231 3300015262 Ga0182007_10000059 Ga0182007_1000005930 343
232 3300015682 Ga0183373_1002 Ga0183373_1002182 343
233 3300025245 Ga0207425_1000003 Ga0207425_1000003282 343
234 3300025258 Ga0209129_1000022 Ga0209129_1000022282 343
235 3300025292 Ga0209676_1000022 Ga0209676_1000022142 343
236 3300025294 Ga0209025_1000007 Ga0209025_1000007281 343
237 3300025297 Ga0209758_1000012 Ga0209758_1000012282 343
238 3300025298 Ga0209050_1000020 Ga0209050_1000020398 343
239 3300025728 Ga0207655_1058324 Ga0207655_10583241 343
240 3300032002 Ga0307416_100000005 Ga0307416_100000005382 343
241 3300032004 Ga0307414_10051121 Ga0307414_100511211 343
242 3300046453 Ga0495627_022979 Ga0495627_022979_683_1714 343
243 3300046512 Ga0495610_0000037 Ga0495610_0000037_167560_168594 343
244 3300046520 Ga0495637_0008506 Ga0495637_0008506_1970_3004 343
245 3300046558 Ga0495633_0030766 Ga0495633_0030766_171_1202 343
246 3300009093 Ga0105240_10083749 Ga0105240_100837492 344
247 3300009545 Ga0105237_10000327 Ga0105237_100003278 344
248 3300013102 Ga0157371_10005041 Ga0157371_100050411 344
249 3300013104 Ga0157370_10020876 Ga0157370_100208763 344
250 3300014497 Ga0182008_10000797 Ga0182008_1000079710 344
251 3300015261 Ga0182006_1000930 Ga0182006_10009304 344
252 3300015262 Ga0182007_10008092 Ga0182007_100080922 344
253 3300017792 Ga0163161_10004111 Ga0163161_100041114 344
254 3300017792 Ga0163161_10231088 Ga0163161_102310881 344
255 3300025914 Ga0207671_10001932 Ga0207671_1000193213 344
256 3300026142 Ga0207698_10437651 Ga0207698_104376512 344
257 3300032004 Ga0307414_10007537 Ga0307414_100075372 344
258 3300046501 Ga0495607_0102858 Ga0495607_0102858_293_1327 344
259 3300048925 Ga0496122_0002587 Ga0496122_0002587_1141_2175 344
260 3300048926 Ga0496123_0003272 Ga0496123_0003272_899_1933 344
261 2162886007 SwRhRL2b_contig_1065068 SwRhRL2b_0440.00003510 345
262 2162886007 SwRhRL2b_contig_3539229 SwRhRL2b_0668.00005100 345
263 3300005289 Ga0065704_10000252 Ga0065704_1000025224 345
264 3300013100 Ga0157373_10000366 Ga0157373_1000036617 345
265 3300013102 Ga0157371_10000707 Ga0157371_1000070723 345
266 3300013104 Ga0157370_10058465 Ga0157370_100584653 345
267 3300014497 Ga0182008_10000047 Ga0182008_1000004779 345
268 3300015261 Ga0182006_1002003 Ga0182006_10020039 345
269 3300031911 Ga0307412_10000001 Ga0307412_10000001661 345
270 3300053093 Ga0500651_0000372 Ga0500651_0000372_5135_6172 345

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13378

MR_MLE_C

Enolase C-terminal domain-like

186

387

0.9

PF02746

MR_MLE_N

Mandelate racemase / muconate lactonizing enzyme, N-terminal domain

50

166

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ijq-assembly1.cif.gz_A structure of dipeptide epimerase from bacteroides thetaiotaomicron complexed with l-ala-d-glu; productive substrate binding. 0.9611 1 334
3ijq-assembly1.cif.gz_A structure of dipeptide epimerase from bacteroides thetaiotaomicron complexed with l-ala-d-glu; productive substrate binding. 0.9501 1 334
3jva-assembly1.cif.gz_B crystal structure of dipeptide epimerase from enterococcus faecalis v583 0.9102 2 335
3ik4-assembly5.cif.gz_B crystal structure of mandelate racemase/muconate lactonizing protein from herpetosiphon aurantiacus 0.902 2 335
2p88-assembly1.cif.gz_D crystal structure of n-succinyl arg/lys racemase from bacillus cereus atcc 14579 0.8948 3 344
ID Description Score Start End Superfamily
3ijlB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9602 111 334 3.20.20.120
3ijlB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9398 111 334 3.20.20.120
3ijlB01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.9301 2 108 3.30.390.10
3ijlB01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.914 2 108 3.30.390.10
af_P0CC06_171_437_3.20.20.120 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.8965 111 334 3.20.20.120
ID Description Score Start End GO Terms
AF-A0A4R0NQB9-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9916 1 344 GO:0000287
GO:0016855
AF-A0A520B7N0-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9916 1 273 GO:0000287
GO:0016855
AF-A0A519UNA1-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9913 1 342 GO:0000287
GO:0016855
AF-A0A2T5JD72-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9911 1 335 GO:0000287
GO:0016855
AF-A0A497YVQ0-F1-model_v4 deleted 0.9905 1 335

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pLDDT pTM Quality
94.05 0.93 High
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Predicted Structure (AlphaFold2)

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