F373720

General Info

Members Datasets Scaffolds Average Seq Length
265 175 128 287

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2961170736|2961176933
Length 340
Sequence MHGCFLLVKRNSGADRMFRVAIQQTLTERLRAGDIESNSSFAVGDVLMRKRASVGRLLFIEPLMPTLAERPPEGDAWIHEVKFDGYRSQIIIEDAEVRILTRRGLDWTAKYRDLVETARGLNVRSAILDGEIIVLNDAGLSDFAALRKAITRRQHDLYFVAFDLLHLNGHDLRDMPLEDRREILSEMIPDGGRIQFSQALPGDAKAIFHLVDKAGLEGMVSKRKDSVYRSGNSTAWLKTKAFTINEYELLGVEREAGKPAFALMAERGTGRYVGSAFITLNREMRERLWRRVQEAPGSPPKGMKRLATQWVKPGLIGRVKHLRGEEDLRHASLQDFREED

Samples

Sample ID Description Type Environment
1 2508501127 Mesorhizobium sp. WSM2561 Isolate Nodule
2 2512875024 Mesorhizobium loti R88b Isolate Nodule
3 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
4 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
5 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
6 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
7 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
8 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
9 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
10 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
11 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
12 2844009547 Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 Isolate Nodule
13 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
14 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
15 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
16 2856356410 Mesorhizobium sp. M4B.F.Ca.ET.088.02.2.1 Isolate Nodule
17 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
18 2869256925 Mesorhizobium sp. M7A.F.Ca.MR.176.00.0.0 Isolate Nodule
19 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
20 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
21 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
22 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
23 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
24 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
25 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
26 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
27 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
28 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
29 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
30 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
31 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
32 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
33 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
34 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
35 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
36 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
37 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
38 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
39 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
40 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
41 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
42 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
43 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
44 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
45 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
46 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
47 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
48 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
49 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
50 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
51 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
52 2906378014 Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 Isolate Nodule
53 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
54 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
55 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
56 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
57 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
58 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
59 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
60 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
61 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
62 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
63 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
64 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
65 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
66 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
67 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
68 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
69 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
70 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
71 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
72 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
73 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
74 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
75 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
76 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
77 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
78 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
79 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
80 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
81 2970489779 Mesorhizobium sp. M7A.F.Ca.US.008.03.1.1 Isolate Nodule
82 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
83 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
84 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
85 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
86 2977828996 Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 Isolate Nodule
87 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
88 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
89 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
90 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
91 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
92 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
93 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
94 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
95 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
96 3004167301 Mesorhizobium loti 582 Isolate Unclassified
97 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
98 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
99 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
100 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
101 3004289098 Mesorhizobium sp. M8A.F.Ca.ET.023.02.2.1 Isolate Nodule
102 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
103 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
104 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
105 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
106 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
107 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
108 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
109 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
110 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
111 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
112 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
113 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
114 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
115 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
116 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
117 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
118 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
119 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
120 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
121 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
122 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
123 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
124 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
125 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
126 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
127 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
128 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
129 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
130 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
131 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
132 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
133 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
134 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
135 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
136 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
137 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
139 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
140 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
150 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
152 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
158 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
159 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
167 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
168 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
169 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
170 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
171 649633066 Mesorhizobium ciceri bv. biserrulae WSM1271 Isolate Nodule
172 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
173 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
174 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
175 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 48.3
Metatranscriptomes 0
Isolates 51.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.3
Nodule 44.53
Rhizoplane 1.51
Rhizosphere 13.96
Stem 0
Stem Tuber 0
Unclassified 11.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10005631 3300001979 Bacteria 5274
2 JGI24737J22298_10021150 3300001990 Bacteria 2075
3 JGI25156J39149_1015700 3300002705 Bacteria 1503
4 JGI25156J39149_1018062 3300002705 Bacteria 1315
5 JGI25157J39369_1000721 3300002741 Bacteria 17667
6 JGI25157J39369_1001067 3300002741 Bacteria 12410
7 JGI25157J39369_1001974 3300002741 Bacteria 6066
8 Ga0055542_1000491 3300003762 Bacteria 36392
9 Ga0055542_1001651 3300003762 Bacteria 10001
10 Ga0055529_1001926 3300003763 Bacteria 4721
11 Ga0055529_1002057 3300003763 Bacteria 4350
12 Ga0055529_1002981 3300003763 Bacteria 2987
13 Ga0070658_10048697 3300005327 Bacteria 3431
14 Ga0070660_100133855 3300005339 Bacteria 1985
15 Ga0070660_100358580 3300005339 Bacteria 1201
16 Ga0070661_100110688 3300005344 Bacteria 2050
17 Ga0070663_100406817 3300005455 Bacteria 1113
18 Ga0068853_100049334 3300005539 Bacteria 3617
19 Ga0070665_100068127 3300005548 Bacteria 3568
20 Ga0070665_100106449 3300005548 Bacteria 2807
21 Ga0068854_100024700 3300005578 Bacteria 4117
22 Ga0075365_10001004 3300006038 Bacteria 12070
23 Ga0075365_10126532 3300006038 Bacteria 1766
24 Ga0075365_10160215 3300006038 Bacteria 1568
25 Ga0075368_10008993 3300006042 Bacteria 3582
26 Ga0075368_10089334 3300006042 Bacteria 1259
27 Ga0075368_10099728 3300006042 Bacteria 1192
28 Ga0075363_100000086 3300006048 Bacteria 19933
29 Ga0075363_100007645 3300006048 Bacteria 4984
30 Ga0075363_100012494 3300006048 Bacteria 4096
31 Ga0075363_100015477 3300006048 Bacteria 3751
32 Ga0075364_10003487 3300006051 Bacteria 8957
33 Ga0075364_10173152 3300006051 Bacteria 1459
34 Ga0075362_10003311 3300006177 Bacteria 5612
35 Ga0075362_10008742 3300006177 Bacteria 3890
36 Ga0075367_10000238 3300006178 Bacteria 18666
37 Ga0075367_10006115 3300006178 Bacteria 6051
38 Ga0075367_10024687 3300006178 Bacteria 3391
39 Ga0075369_10041661 3300006186 Bacteria 1966
40 Ga0075369_10052690 3300006186 Bacteria 1764
41 Ga0075370_10001289 3300006353 Bacteria 10715
42 Ga0075370_10004549 3300006353 Bacteria 6756
43 Ga0075370_10021328 3300006353 Bacteria 3549
44 Ga0075370_10039309 3300006353 Bacteria 2665
45 Ga0075370_10044345 3300006353 Bacteria 2514
46 Ga0075370_10281709 3300006353 Bacteria 987
47 Ga0105245_10142623 3300009098 Bacteria 2258
48 Ga0105243_10398731 3300009148 Bacteria 1277
49 Ga0105241_10128468 3300009174 Bacteria 2049
50 Ga0105238_10556567 3300009551 Bacteria 1152
51 Ga0105239_10019791 3300010375 Bacteria 7429
52 Ga0105246_10225033 3300011119 Bacteria 1473
53 Ga0157373_10085601 3300013100 Bacteria 2222
54 Ga0157370_10178227 3300013104 Bacteria 1975
55 Ga0157369_10035455 3300013105 Bacteria 5470
56 Ga0157369_10452339 3300013105 Bacteria 1330
57 Ga0163163_10264665 3300014325 Bacteria 1770
58 Ga0182006_1034353 3300015261 Bacteria 2029
59 Ga0182007_10072630 3300015262 Bacteria 1127
60 Ga0209026_1000002 3300025250 Bacteria 1136158
61 Ga0209026_1000023 3300025250 Bacteria 357521
62 Ga0209026_1000327 3300025250 Bacteria 48226
63 Ga0209148_1000123 3300025254 Bacteria 185406
64 Ga0209148_1000233 3300025254 Bacteria 90861
65 Ga0209148_1002500 3300025254 Bacteria 6221
66 Ga0209148_1008734 3300025254 Bacteria 2020
67 Ga0209148_1019922 3300025254 Bacteria 1109
68 Ga0209759_1000119 3300025256 Bacteria 141051
69 Ga0209759_1000321 3300025256 Bacteria 63590
70 Ga0209759_1000459 3300025256 Bacteria 46317
71 Ga0209455_1000062 3300025272 Bacteria 335169
72 Ga0209455_1000292 3300025272 Bacteria 52680
73 Ga0209455_1001036 3300025272 Bacteria 13826
74 Ga0207647_10019347 3300025904 Bacteria 4581
75 Ga0207705_10051521 3300025909 Bacteria 2963
76 Ga0207671_10159946 3300025914 Bacteria 1744
77 Ga0207649_10077030 3300025920 Bacteria 2147
78 Ga0207711_10366044 3300025941 Bacteria 1336
79 Ga0207640_10117015 3300025981 Bacteria 1901
80 Ga0207678_10098598 3300026067 Bacteria 2496
81 Ga0207702_10626687 3300026078 Bacteria 1057
82 Ga0207698_10402536 3300026142 Bacteria 1308
83 Ga0209813_10004796 3300027866 Bacteria 3247
84 Ga0209813_10006515 3300027866 Bacteria 2889
85 Ga0268266_10152481 3300028379 Bacteria 2084
86 Ga0495631_0099952 3300046518 Bacteria 1249
87 Ga0495625_0002816 3300046660 Bacteria 18317
88 Ga0495686_0122251 3300047472 Bacteria 1550
89 Ga0496102_0223601 3300048905 Bacteria 1775
90 Ga0496110_0378431 3300048913 Bacteria 1290
91 Ga0496113_0123094 3300048916 Bacteria 2030
92 Ga0496113_0536312 3300048916 Bacteria 939
93 Ga0496119_0119853 3300048922 Bacteria 1448
94 nmdc:mga03683_2678_c1 3300050489 Bacteria 5579
95 nmdc:mga03683_38163_c1 3300050489 Bacteria 1961
96 nmdc:mga03n38_11491_c1 3300050490 Bacteria 3302
97 nmdc:mga03n38_15527_c1 3300050490 Bacteria 2942
98 nmdc:mga03n38_167_c1 3300050490 Bacteria 14571
99 nmdc:mga03n38_187042_c1 3300050490 Bacteria 1065
100 nmdc:mga03n38_3134_c1 3300050490 Bacteria 5261
101 nmdc:mga03n38_71_c1 3300050490 Bacteria 21604
102 nmdc:mga00v17_295685_c1 3300050491 Bacteria 1052
103 nmdc:mga00v17_33285_c1 3300050491 Bacteria 3053
104 nmdc:mga0yw44_109269_c1 3300050492 Bacteria 1770
105 nmdc:mga0yw44_6285_c1 3300050492 Bacteria 5724
106 nmdc:mga0yw44_73862_c1 3300050492 Bacteria 2123
107 nmdc:mga0k408_76404_c1 3300050493 Bacteria 1957
108 nmdc:mga06z11_11072_c1 3300050494 Bacteria 3874
109 nmdc:mga06z11_11867_c1 3300050494 Bacteria 3770
110 nmdc:mga06z11_226_c1 3300050494 Bacteria 21954
111 nmdc:mga06z11_798_c1 3300050494 Bacteria 11500
112 nmdc:mga06z11_9928_c1 3300050494 Bacteria 4033
113 nmdc:mga04h51_123397_c1 3300050495 Bacteria 967
114 nmdc:mga04h51_2695_c1 3300050495 Bacteria 4230
115 nmdc:mga07m45_108416_c1 3300050496 Bacteria 1598
116 nmdc:mga07m45_109_c1 3300050496 Bacteria 32955
117 nmdc:mga07m45_12102_c1 3300050496 Bacteria 4244
118 nmdc:mga07m45_33531_c1 3300050496 Bacteria 2852
119 nmdc:mga07m45_491_c1 3300050496 Bacteria 16698
120 nmdc:mga07m45_5865_c1 3300050496 Bacteria 6165
121 nmdc:mga07m45_6481_c1 3300050496 Bacteria 5919
122 nmdc:mga07m45_78331_c1 3300050496 Bacteria 1886
123 nmdc:mga0sz30_17860_c1 3300050516 Bacteria 2833
124 Ga0500658_0166323 3300053134 Bacteria 1000
125 Ga0500604_0014597 3300053151 Bacteria 2140
126 Ga0500627_0003804 3300053158 Bacteria 4740
127 Ga0500627_0045332 3300053158 Bacteria 1902
128 Ga0500627_0058570 3300053158 Bacteria 1691

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2882632389 2882633427 273
2 iso_pu_bacteria 2882632389 2882637131 273
3 iso_pu_bacteria 2882632389 2882638453 273
4 iso_pu_bacteria 2888350351 2888353257 273
5 iso_pu_bacteria 2513237305 2514420415 274
6 iso_pu_bacteria 2721755686 2723574581 274
7 iso_pu_bacteria 2881861095 2881867896 274
8 iso_pu_bacteria 2885342637 2885345373 274
9 iso_pu_bacteria 2924784321 2924787476 274
10 3300050492 nmdc:mga0yw44_6285_c1 nmdc:mga0yw44_6285_c1_2008_2835 275
11 3300002741 JGI25157J39369_1000721 JGI25157J39369_100072121 276
12 3300010375 Ga0105239_10019791 Ga0105239_1001979112 276
13 3300013104 Ga0157370_10178227 Ga0157370_101782272 276
14 3300013105 Ga0157369_10452339 Ga0157369_104523392 276
15 3300048916 Ga0496113_0123094 Ga0496113_0123094_218_1048 276
16 3300050490 nmdc:mga03n38_187042_c1 nmdc:mga03n38_187042_c1_115_945 276
17 3300050496 nmdc:mga07m45_12102_c1 nmdc:mga07m45_12102_c1_1709_2539 276
18 3300006038 Ga0075365_10126532 Ga0075365_101265321 277
19 3300006048 Ga0075363_100012494 Ga0075363_1000124949 277
20 3300006051 Ga0075364_10003487 Ga0075364_100034879 277
21 3300006177 Ga0075362_10008742 Ga0075362_100087421 277
22 3300046518 Ga0495631_0099952 Ga0495631_0099952_73_906 277
23 3300053134 Ga0500658_0166323 Ga0500658_0166323_71_904 277
24 3300053158 Ga0500627_0045332 Ga0500627_0045332_700_1533 277
25 iso_pu_bacteria 2881861095 2881863899 277
26 iso_pu_bacteria 2924784321 2924784828 277
27 3300006042 Ga0075368_10099728 Ga0075368_100997282 278
28 3300053151 Ga0500604_0014597 Ga0500604_0014597_546_1406 280
29 iso_pu_bacteria 2512875024 2512957963 281
30 iso_pu_bacteria 2643221595 2643985773 281
31 iso_pu_bacteria 2756170246 2756677944 281
32 iso_pu_bacteria 2844002411 2844004367 281
33 iso_pu_bacteria 2844009547 2844014047 281
34 iso_pu_bacteria 2856356410 2856361492 281
35 iso_pu_bacteria 2878738818 2878742243 281
36 iso_pu_bacteria 2888337043 2888341533 281
37 iso_pu_bacteria 2903448605 2903448973 281
38 iso_pu_bacteria 2906378014 2906378434 281
39 iso_pu_bacteria 2924776078 2924780043 281
40 iso_pu_bacteria 2937822353 2937825651 281
41 iso_pu_bacteria 2937877337 2937882573 281
42 iso_pu_bacteria 2958084443 2958089698 281
43 iso_pu_bacteria 2958092219 2958093117 281
44 iso_pu_bacteria 2958092219 2958096537 281
45 iso_pu_bacteria 2968083720 2968088440 281
46 iso_pu_bacteria 2977986579 2977989646 281
47 iso_pu_bacteria 3004167301 3004169811 281
48 iso_pu_bacteria 3004334049 3004336743 281
49 iso_pu_bacteria 3004334049 3004340368 281
50 iso_pu_bacteria 637000159 637079754 281
51 iso_pu_bacteria 637000159 637080462 281
52 3300046660 Ga0495625_0002816 Ga0495625_0002816_5342_6223 282
53 3300047472 Ga0495686_0122251 Ga0495686_0122251_583_1464 282
54 3300053158 Ga0500627_0003804 Ga0500627_0003804_3035_3916 282
55 iso_pu_bacteria 2513237090 2513611015 282
56 iso_pu_bacteria 2791355123 2792746255 282
57 iso_pu_bacteria 2841734538 2841739045 282
58 iso_pu_bacteria 2856342000 2856347920 282
59 iso_pu_bacteria 2856349417 2856354003 282
60 iso_pu_bacteria 2871466892 2871471432 282
61 iso_pu_bacteria 2871488783 2871492893 282
62 iso_pu_bacteria 2874139085 2874143590 282
63 iso_pu_bacteria 2878753008 2878756864 282
64 iso_pu_bacteria 2881845957 2881850609 282
65 iso_pu_bacteria 2882912400 2882917027 282
66 iso_pu_bacteria 2888337043 2888342533 282
67 iso_pu_bacteria 2903492973 2903506280 282
68 iso_pu_bacteria 2906378014 2906379863 282
69 iso_pu_bacteria 2937813078 2937813235 282
70 iso_pu_bacteria 2937972304 2937976274 282
71 iso_pu_bacteria 2958034702 2958038782 282
72 iso_pu_bacteria 2961170736 2961172106 282
73 iso_pu_bacteria 2967996073 2968000854 282
74 iso_pu_bacteria 2968003550 2968006897 282
75 iso_pu_bacteria 2968016561 2968017587 282
76 iso_pu_bacteria 2970469710 2970472237 282
77 iso_pu_bacteria 2970503327 2970504703 282
78 iso_pu_bacteria 2970524798 2970530713 282
79 iso_pu_bacteria 2977821940 2977826046 282
80 iso_pu_bacteria 2979808191 2979809341 282
81 iso_pu_bacteria 2996348954 2996355275 282
82 iso_pu_bacteria 3000135777 3000139406 282
83 iso_pu_bacteria 3004167301 3004172245 282
84 iso_pu_bacteria 3004211236 3004212796 282
85 iso_pu_bacteria 3004218560 3004221487 282
86 iso_pu_bacteria 3004275668 3004281808 282
87 iso_pu_bacteria 649633066 649873753 282
88 iso_pu_bacteria 8004374579 8004378452 282
89 iso_pu_bacteria 2512875024 2512958879 283
90 iso_pu_bacteria 2513237164 2514034221 283
91 iso_pu_bacteria 2841734538 2841739880 283
92 iso_pu_bacteria 2856320880 2856323691 283
93 iso_pu_bacteria 2869256925 2869259788 283
94 iso_pu_bacteria 2871474448 2871476500 283
95 iso_pu_bacteria 2885305155 2885311587 283
96 iso_pu_bacteria 2937836603 2937837925 283
97 iso_pu_bacteria 2958071322 2958074109 283
98 iso_pu_bacteria 2970489779 2970495018 283
99 iso_pu_bacteria 2977864932 2977871835 283
100 iso_pu_bacteria 3004289098 3004293670 283
101 iso_pu_bacteria 8004633249 8004637342 283
102 3300006038 Ga0075365_10001004 Ga0075365_100010041 284
103 3300006042 Ga0075368_10008993 Ga0075368_100089932 284
104 3300006353 Ga0075370_10039309 Ga0075370_100393091 284
105 3300027866 Ga0209813_10006515 Ga0209813_100065152 284
106 3300050490 nmdc:mga03n38_3134_c1 nmdc:mga03n38_3134_c1_96_950 284
107 3300050494 nmdc:mga06z11_798_c1 nmdc:mga06z11_798_c1_8892_9746 284
108 3300050495 nmdc:mga04h51_2695_c1 nmdc:mga04h51_2695_c1_241_1095 284
109 3300050496 nmdc:mga07m45_6481_c1 nmdc:mga07m45_6481_c1_2936_3793 284
110 3300002705 JGI25156J39149_1015700 JGI25156J39149_10157002 285
111 3300002705 JGI25156J39149_1018062 JGI25156J39149_10180622 285
112 3300002741 JGI25157J39369_1001067 JGI25157J39369_100106720 285
113 3300003762 Ga0055542_1000491 Ga0055542_100049136 285
114 3300003762 Ga0055542_1001651 Ga0055542_10016516 285
115 3300003763 Ga0055529_1001926 Ga0055529_10019268 285
116 3300003763 Ga0055529_1002981 Ga0055529_10029815 285
117 3300005339 Ga0070660_100133855 Ga0070660_1001338551 285
118 3300005339 Ga0070660_100358580 Ga0070660_1003585801 285
119 3300005344 Ga0070661_100110688 Ga0070661_1001106884 285
120 3300005455 Ga0070663_100406817 Ga0070663_1004068171 285
121 3300005539 Ga0068853_100049334 Ga0068853_1000493343 285
122 3300005548 Ga0070665_100068127 Ga0070665_1000681277 285
123 3300005548 Ga0070665_100106449 Ga0070665_1001064495 285
124 3300005578 Ga0068854_100024700 Ga0068854_1000247008 285
125 3300006048 Ga0075363_100015477 Ga0075363_1000154776 285
126 3300006051 Ga0075364_10173152 Ga0075364_101731521 285
127 3300006177 Ga0075362_10003311 Ga0075362_100033115 285
128 3300006178 Ga0075367_10000238 Ga0075367_1000023826 285
129 3300006186 Ga0075369_10041661 Ga0075369_100416612 285
130 3300006186 Ga0075369_10052690 Ga0075369_100526902 285
131 3300006353 Ga0075370_10001289 Ga0075370_100012897 285
132 3300006353 Ga0075370_10044345 Ga0075370_100443454 285
133 3300009098 Ga0105245_10142623 Ga0105245_101426234 285
134 3300009148 Ga0105243_10398731 Ga0105243_103987312 285
135 3300009174 Ga0105241_10128468 Ga0105241_101284685 285
136 3300009551 Ga0105238_10556567 Ga0105238_105565671 285
137 3300011119 Ga0105246_10225033 Ga0105246_102250333 285
138 3300013105 Ga0157369_10035455 Ga0157369_100354554 285
139 3300015261 Ga0182006_1034353 Ga0182006_10343534 285
140 3300025250 Ga0209026_1000002 Ga0209026_1000002588 285
141 3300025250 Ga0209026_1000023 Ga0209026_1000023311 285
142 3300025254 Ga0209148_1000233 Ga0209148_100023356 285
143 3300025254 Ga0209148_1002500 Ga0209148_10025009 285
144 3300025254 Ga0209148_1008734 Ga0209148_10087342 285
145 3300025254 Ga0209148_1019922 Ga0209148_10199221 285
146 3300025256 Ga0209759_1000119 Ga0209759_1000119126 285
147 3300025256 Ga0209759_1000459 Ga0209759_10004594 285
148 3300025272 Ga0209455_1000062 Ga0209455_1000062304 285
149 3300025272 Ga0209455_1000292 Ga0209455_10002929 285
150 3300025904 Ga0207647_10019347 Ga0207647_100193478 285
151 3300025914 Ga0207671_10159946 Ga0207671_101599463 285
152 3300025920 Ga0207649_10077030 Ga0207649_100770304 285
153 3300025941 Ga0207711_10366044 Ga0207711_103660441 285
154 3300025981 Ga0207640_10117015 Ga0207640_101170153 285
155 3300026067 Ga0207678_10098598 Ga0207678_100985982 285
156 3300026078 Ga0207702_10626687 Ga0207702_106266872 285
157 3300026142 Ga0207698_10402536 Ga0207698_104025361 285
158 3300027866 Ga0209813_10004796 Ga0209813_100047964 285
159 3300028379 Ga0268266_10152481 Ga0268266_101524812 285
160 3300048905 Ga0496102_0223601 Ga0496102_0223601_26_883 285
161 3300048913 Ga0496110_0378431 Ga0496110_0378431_93_950 285
162 3300048916 Ga0496113_0536312 Ga0496113_0536312_55_912 285
163 3300048922 Ga0496119_0119853 Ga0496119_0119853_561_1418 285
164 3300050489 nmdc:mga03683_38163_c1 nmdc:mga03683_38163_c1_494_1357 285
165 3300050490 nmdc:mga03n38_71_c1 nmdc:mga03n38_71_c1_19390_20247 285
166 3300050491 nmdc:mga00v17_295685_c1 nmdc:mga00v17_295685_c1_122_979 285
167 3300050491 nmdc:mga00v17_33285_c1 nmdc:mga00v17_33285_c1_1986_2849 285
168 3300050492 nmdc:mga0yw44_73862_c1 nmdc:mga0yw44_73862_c1_765_1661 285
169 3300050494 nmdc:mga06z11_226_c1 nmdc:mga06z11_226_c1_18122_18979 285
170 3300050496 nmdc:mga07m45_491_c1 nmdc:mga07m45_491_c1_15494_16351 285
171 3300050516 nmdc:mga0sz30_17860_c1 nmdc:mga0sz30_17860_c1_1777_2634 285
172 3300053158 Ga0500627_0058570 Ga0500627_0058570_377_1261 285
173 iso_pu_bacteria 2856364286 2856365758 285
174 iso_pu_bacteria 2869285874 2869288776 285
175 iso_pu_bacteria 2871429161 2871430662 285
176 iso_pu_bacteria 2874146452 2874148181 285
177 iso_pu_bacteria 2874155637 2874157104 285
178 iso_pu_bacteria 2874168670 2874175548 285
179 iso_pu_bacteria 2876413966 2876415062 285
180 iso_pu_bacteria 2878745973 2878747298 285
181 iso_pu_bacteria 2903492973 2903498425 285
182 iso_pu_bacteria 2906308376 2906309468 285
183 iso_pu_bacteria 2906321335 2906322543 285
184 iso_pu_bacteria 2937813078 2937814677 285
185 iso_pu_bacteria 2958041894 2958043160 285
186 iso_pu_bacteria 2958130278 2958133174 285
187 iso_pu_bacteria 2958179912 2958181343 285
188 iso_pu_bacteria 2961077736 2961079178 285
189 iso_pu_bacteria 2977843712 2977845153 285
190 iso_pu_bacteria 2977942078 2977949085 285
191 iso_pu_bacteria 2979742915 2979745335 285
192 iso_pu_bacteria 8004387939 8004388207 285
193 iso_pu_bacteria 8004714634 8004715727 285
194 3300006353 Ga0075370_10281709 Ga0075370_102817091 286
195 3300050489 nmdc:mga03683_2678_c1 nmdc:mga03683_2678_c1_1612_2472 286
196 3300050490 nmdc:mga03n38_11491_c1 nmdc:mga03n38_11491_c1_786_1646 286
197 3300050492 nmdc:mga0yw44_109269_c1 nmdc:mga0yw44_109269_c1_668_1528 286
198 3300050493 nmdc:mga0k408_76404_c1 nmdc:mga0k408_76404_c1_649_1509 286
199 3300050494 nmdc:mga06z11_9928_c1 nmdc:mga06z11_9928_c1_1157_2017 286
200 3300050496 nmdc:mga07m45_78331_c1 nmdc:mga07m45_78331_c1_242_1102 286
201 iso_pu_bacteria 2961170736 2961176933 286
202 iso_pu_bacteria 2970503327 2970509605 286
203 iso_pu_bacteria 2979808191 2979814393 286
204 3300001979 JGI24740J21852_10005631 JGI24740J21852_100056313 287
205 3300001990 JGI24737J22298_10021150 JGI24737J22298_100211504 287
206 3300002741 JGI25157J39369_1001974 JGI25157J39369_10019743 287
207 3300003763 Ga0055529_1002057 Ga0055529_10020577 287
208 3300005327 Ga0070658_10048697 Ga0070658_100486976 287
209 3300006038 Ga0075365_10160215 Ga0075365_101602152 287
210 3300006042 Ga0075368_10089334 Ga0075368_100893342 287
211 3300006048 Ga0075363_100000086 Ga0075363_10000008612 287
212 3300006048 Ga0075363_100007645 Ga0075363_1000076452 287
213 3300006178 Ga0075367_10006115 Ga0075367_100061158 287
214 3300006178 Ga0075367_10024687 Ga0075367_100246877 287
215 3300006353 Ga0075370_10004549 Ga0075370_100045497 287
216 3300006353 Ga0075370_10021328 Ga0075370_100213282 287
217 3300013100 Ga0157373_10085601 Ga0157373_100856011 287
218 3300014325 Ga0163163_10264665 Ga0163163_102646651 287
219 3300015262 Ga0182007_10072630 Ga0182007_100726301 287
220 3300025250 Ga0209026_1000327 Ga0209026_100032736 287
221 3300025254 Ga0209148_1000123 Ga0209148_100012321 287
222 3300025256 Ga0209759_1000321 Ga0209759_100032137 287
223 3300025272 Ga0209455_1001036 Ga0209455_100103611 287
224 3300025909 Ga0207705_10051521 Ga0207705_100515214 287
225 3300050490 nmdc:mga03n38_15527_c1 nmdc:mga03n38_15527_c1_271_1140 287
226 3300050490 nmdc:mga03n38_167_c1 nmdc:mga03n38_167_c1_9444_10307 287
227 3300050494 nmdc:mga06z11_11072_c1 nmdc:mga06z11_11072_c1_2484_3347 287
228 3300050494 nmdc:mga06z11_11867_c1 nmdc:mga06z11_11867_c1_1872_2741 287
229 3300050495 nmdc:mga04h51_123397_c1 nmdc:mga04h51_123397_c1_69_938 287
230 3300050496 nmdc:mga07m45_108416_c1 nmdc:mga07m45_108416_c1_106_975 287
231 3300050496 nmdc:mga07m45_109_c1 nmdc:mga07m45_109_c1_30554_31417 287
232 3300050496 nmdc:mga07m45_33531_c1 nmdc:mga07m45_33531_c1_335_1198 287
233 3300050496 nmdc:mga07m45_5865_c1 nmdc:mga07m45_5865_c1_3946_4815 287
234 iso_pu_bacteria 2508501127 2509144050 287
235 iso_pu_bacteria 2856349417 2856350461 287
236 iso_pu_bacteria 2871495908 2871501830 287
237 iso_pu_bacteria 2876369609 2876369761 287
238 iso_pu_bacteria 2878753008 2878755800 287
239 iso_pu_bacteria 2878760144 2878765933 287
240 iso_pu_bacteria 2878767105 2878772607 287
241 iso_pu_bacteria 2881155292 2881156919 287
242 iso_pu_bacteria 2881845957 2881846083 287
243 iso_pu_bacteria 2885350715 2885351938 287
244 iso_pu_bacteria 2888343758 2888345113 287
245 iso_pu_bacteria 2903492973 2903503548 287
246 iso_pu_bacteria 2903540706 2903546879 287
247 iso_pu_bacteria 2937994558 2938000737 287
248 iso_pu_bacteria 2958064165 2958069915 287
249 iso_pu_bacteria 2958165035 2958171108 287
250 iso_pu_bacteria 2961127735 2961132941 287
251 iso_pu_bacteria 2961163497 2961169552 287
252 iso_pu_bacteria 2961170736 2961173960 287
253 iso_pu_bacteria 2965018300 2965023804 287
254 iso_pu_bacteria 2967996073 2967999032 287
255 iso_pu_bacteria 2968003550 2968006716 287
256 iso_pu_bacteria 2968171901 2968177942 287
257 iso_pu_bacteria 2970503327 2970506549 287
258 iso_pu_bacteria 2970554993 2970560788 287
259 iso_pu_bacteria 2977821940 2977825019 287
260 iso_pu_bacteria 2977828996 2977834023 287
261 iso_pu_bacteria 2977864932 2977869956 287
262 iso_pu_bacteria 2979808191 2979811197 287
263 iso_pu_bacteria 2987659509 2987665470 287
264 iso_pu_bacteria 3004188549 3004194740 287
265 iso_pu_bacteria 8004374579 8004377382 287

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01068

DNA_ligase_A_M

ATP dependent DNA ligase domain

65

240

0.92

PF09414

RNA_ligase

RNA ligase

75

240

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rpw-assembly1.cif.gz_E archaeal dna ligase and heterotrimeric pcna in complex with adenylated dna 0.75 20 181
3vnn-assembly1.cif.gz_A crystal structure of a sub-domain of the nucleotidyltransferase (adenylation) domain of human dna ligase iv 0.7224 26 141
7l34-assembly1.cif.gz_A human dna ligase 1 - r641l nicked dna complex 0.7182 22 265
7kr4-assembly1.cif.gz_A human dna ligase 1(e346a/e592a) bound to a nicked dna substrate control duplex 0.7175 22 265
6p0d-assembly1.cif.gz_A human dna ligase 1 (e346a/e592a) bound to an adenylated, hydroxyl terminated dna nick 0.716 23 265
ID Description Score Start End Superfamily
1vs0B02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.848 31 132 3.30.470.30
af_A0A0P0V6S8_26_128_3.30.470.30 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.8093 31 115 3.30.470.30
1x9nA03 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.7956 31 141 3.30.470.30
1vs0B02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.7761 31 132 3.30.470.30
2hixA02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.77 23 181 3.30.470.30
ID Description Score Start End GO Terms
AF-A0A3S3M7T0-F1-model_v4 ATP-dependent DNA ligase 0.9517 26 139 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A3S3M7T0-F1-model_v4 ATP-dependent DNA ligase 0.9128 26 139 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A537T390-F1-model_v4 ATP-dependent DNA ligase family profile domain-containing protein 0.8905 31 107 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A529FC24-F1-model_v4 ATP-dependent DNA ligase 0.8888 32 143 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A0Q7TLX3-F1-model_v4 ATP-dependent DNA ligase family profile domain-containing protein 0.8835 26 115 GO:0003910
GO:0005524
GO:0006281
GO:0006310

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pLDDT pTM Quality
69.38 0.5 Medium
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Predicted Structure (AlphaFold2)

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