F372145

General Info

Members Datasets Scaffolds Average Seq Length
263 184 190 516

Family's Representative Sequence

Representative Sequence 3300048919|Ga0496116_0026741|Ga0496116_0026741_1232_3016
Length 576
Sequence MADLVEGDRDGETVAATALSEPCTPAASHGHGSRLVEWRAMSSPANLPPVLRPENPPTRSLGELANRFGADVRGDARGVELHGITLATADLRPGEAFVALRGVNRHGAEFADQAIERGAVAIITDAAGADILRASTVPVLVLENPRARMGELSAWVYGTGVDDELPLLFATTGTNGKTSVSHLLEGMLSQLGVVTGLSSTAERHIAGQVIVSRLTTPEASEFHALLALMRERGVEAVAVEVSAQALSRHRVDGIVFDVAAFTNLTHDHLDDYADMQEYLEAKLPLFRPDRARRAVISLDSAAAAEVVARCEIPFTTIATPDIAADGELAATAQWRVGIIDERQEGTRFSLHGPDGEHLETVVPVIGRHMAANAALAIVMMYEGGYAWQRLVDALDGSRIDAYLPGRTERVSGDAGPAVYVDFGHSPDAFEKTLAAVRRVTPGRVVMLFGADGDRDTTKRHDMGRTGVEGSDILVITDHHPRFEEPTSIRATLIEGARRARPDAEIHEFSPPERAIVEAVALVGEGDAILWAGPGHQDYRDIRGQRTPYSARELARRALRDAGWPVPEPRXXXXYED

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
3 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
4 2643221546 Microbacterium sp. Root53 Isolate Unclassified
5 2643221549 Agromyces sp. Root1464 Isolate Unclassified
6 2643221553 Microbacterium sp. Root553 Isolate Unclassified
7 2643221566 Microbacterium sp. Root166 Isolate Unclassified
8 2643221575 Microbacterium sp. Root61 Isolate Unclassified
9 2643221597 Microbacterium sp. Root180 Isolate Unclassified
10 2643221616 Leifsonia sp. Root227 Isolate Unclassified
11 2643221619 Agromyces sp. Root81 Isolate Unclassified
12 2643221630 Microbacterium sp. Root322 Isolate Unclassified
13 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
14 2643221649 Leifsonia sp. Root4 Isolate Unclassified
15 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
16 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
17 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
18 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
19 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
20 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
21 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
22 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
23 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
24 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
25 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
26 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
27 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
28 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
29 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
30 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
31 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
32 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
33 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
34 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
35 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
36 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
37 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
38 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
39 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
40 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
41 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
42 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
43 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
44 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
45 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
46 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
47 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
48 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
49 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
50 2919069694 Microbacterium sp. 1154 Isolate Unclassified
51 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
52 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
53 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
54 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
55 2928153084 Leifsonia sp. 563 Isolate Unclassified
56 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
57 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
58 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
59 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
60 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
61 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
62 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
63 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
64 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
65 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
66 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
67 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
68 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
69 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
70 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
71 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
72 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
73 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
74 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
75 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
76 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
77 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
78 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
79 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
80 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
81 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
82 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
83 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
84 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
85 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
86 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
87 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
88 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
89 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
90 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
91 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
92 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
93 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
94 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
95 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
96 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
97 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
98 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
99 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
100 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
101 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
102 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
103 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
109 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
124 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
125 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
126 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
130 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
131 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
132 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
133 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
134 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
135 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
149 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
150 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
177 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
182 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
183 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
184 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 69.58
Metatranscriptomes 2.66
Isolates 27.76

Biome Distribution

Category Percentage (%)
Aerial Root 1.14
Bulb 0
Endosphere 11.41
Nodule 0
Rhizoplane 4.18
Rhizosphere 47.91
Stem 0
Stem Tuber 0.38
Unclassified 34.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10003827 3300001990 Bacteria 5293
2 JGI24735J21928_10005249 3300002067 Bacteria 4304
3 Ga0006562J51391_1007855 3300003578 Bacteria 5880
4 Ga0006562J51391_1007856 3300003578 Bacteria 5660
5 Ga0006562J51391_1010188 3300003578 Bacteria 13150
6 Ga0006562J51391_1010190 3300003578 Bacteria 3350
7 Ga0055539_1000005 3300003752 Bacteria 609598
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1000297 3300003759 Bacteria 42949
10 Ga0055527_1000001 3300003760 Bacteria 850044
11 Ga0055529_1000019 3300003763 Bacteria 332786
12 Ga0070658_10000616 3300005327 Bacteria 30727
13 Ga0070658_10018762 3300005327 Bacteria 5541
14 Ga0070667_100101181 3300005367 Bacteria 2489
15 Ga0070710_10022762 3300005437 Bacteria 3283
16 Ga0068855_100057158 3300005563 Bacteria 4574
17 Ga0068857_100018988 3300005577 Bacteria 6033
18 Ga0068856_100036778 3300005614 Bacteria 4801
19 Ga0068852_100019117 3300005616 Bacteria 5414
20 Ga0068859_100134998 3300005617 Bacteria 2540
21 Ga0068851_10000020 3300005834 Bacteria 133551
22 Ga0075365_10021120 3300006038 Bacteria 4055
23 Ga0075365_10036144 3300006038 Bacteria 3200
24 Ga0075364_10019869 3300006051 Bacteria 4222
25 Ga0075364_10039802 3300006051 Bacteria 3048
26 Ga0075370_10014225 3300006353 Bacteria 4240
27 Ga0105240_10010645 3300009093 Bacteria 12915
28 Ga0105240_10271720 3300009093 Bacteria 1951
29 Ga0105241_10000260 3300009174 Bacteria 39516
30 Ga0105237_10002645 3300009545 Bacteria 22052
31 Ga0105238_10020923 3300009551 Bacteria 6665
32 Ga0157371_10002137 3300013102 Bacteria 19248
33 Ga0157370_10001273 3300013104 Bacteria 31530
34 Ga0157369_10004048 3300013105 Bacteria 17368
35 Ga0171462_1001 3300013250 Bacteria 1135406
36 Ga0157372_10059370 3300013307 Bacteria 4278
37 Ga0163163_10175353 3300014325 Bacteria 2190
38 Ga0197907_11463701 3300020069 Bacteria 3410
39 Ga0206354_11603342 3300020081 Bacteria 3397
40 Ga0206353_10143035 3300020082 Bacteria 4038
41 Ga0209566_100240 3300025225 Bacteria 52739
42 Ga0209674_100001 3300025226 Bacteria 4013750
43 Ga0209672_100006 3300025228 Bacteria 1004497
44 Ga0209147_101283 3300025229 Bacteria 9777
45 Ga0209563_100001 3300025230 Bacteria 4013775
46 Ga0209646_1000098 3300025246 Bacteria 180711
47 Ga0209677_100001 3300025253 Bacteria 4013787
48 Ga0209677_106545 3300025253 Bacteria 2730
49 Ga0209148_1000015 3300025254 Bacteria 850103
50 Ga0209148_1003839 3300025254 Bacteria 3919
51 Ga0209455_1000013 3300025272 Bacteria 850103
52 Ga0209455_1001100 3300025272 Bacteria 13278
53 Ga0207656_10000003 3300025321 Bacteria 771644
54 Ga0207692_10030244 3300025898 Bacteria 2581
55 Ga0207705_10000006 3300025909 Bacteria 657147
56 Ga0207705_10048769 3300025909 Bacteria 3047
57 Ga0207705_10065465 3300025909 Bacteria 2627
58 Ga0207654_10000003 3300025911 Bacteria 1030378
59 Ga0207695_10013661 3300025913 Bacteria 9668
60 Ga0207671_10000002 3300025914 Bacteria 1144816
61 Ga0207694_10000073 3300025924 Bacteria 118507
62 Ga0207667_10003213 3300025949 Bacteria 20183
63 Ga0207667_10104451 3300025949 Bacteria 2922
64 Ga0207658_10080896 3300025986 Bacteria 2490
65 Ga0207674_10001204 3300026116 Bacteria 33692
66 Ga0207698_10000464 3300026142 Bacteria 23539
67 Ga0307514_10012670 3300031649 Bacteria 7007
68 Ga0307406_10007875 3300031901 Bacteria 5932
69 Ga0307406_10017595 3300031901 Bacteria 4164
70 Ga0307412_10034688 3300031911 Bacteria 3218
71 Ga0395899_0008977 3300037312 Bacteria 7688
72 Ga0395900_0001424 3300037418 Bacteria 28552
73 Ga0395900_0092695 3300037418 Bacteria 3104
74 Ga0395900_0156915 3300037418 Bacteria 2324
75 Ga0395898_0000015 3300037466 Bacteria 439819
76 Ga0439449_0023127 3300042007 Bacteria 2326
77 Ga0466965_0000015 3300044683 Bacteria 81629
78 Ga0466965_0062885 3300044683 Bacteria 1857
79 Ga0466970_0038094 3300044765 Bacteria 2549
80 Ga0466958_0019139 3300045836 Bacteria 3983
81 Ga0495590_0000279 3300046457 Bacteria 27525
82 Ga0495650_0000763 3300046471 Bacteria 39830
83 Ga0495654_0014467 3300046530 Bacteria 4200
84 Ga0495645_0027699 3300046543 Bacteria 4117
85 Ga0495613_0093245 3300046689 Bacteria 2180
86 Ga0495672_0016666 3300047320 Bacteria 4940
87 Ga0496100_0003508 3300048903 Bacteria 8188
88 Ga0496101_0004625 3300048904 Bacteria 8697
89 Ga0496102_0182839 3300048905 Bacteria 1975
90 Ga0496104_0003964 3300048907 Bacteria 12813
91 Ga0496104_0057156 3300048907 Bacteria 3691
92 Ga0496105_0030327 3300048908 Bacteria 4431
93 Ga0496105_0032382 3300048908 Bacteria 4289
94 Ga0496107_0006598 3300048910 Bacteria 7989
95 Ga0496109_0041541 3300048912 Bacteria 4165
96 Ga0496111_0058830 3300048914 Bacteria 2783
97 Ga0496115_0048844 3300048918 Bacteria 3385
98 Ga0496116_0026741 3300048919 Bacteria 4209
99 Ga0496116_0084914 3300048919 Bacteria 1948
100 Ga0496117_0000028 3300048920 Bacteria 407392
101 Ga0496117_0004308 3300048920 Bacteria 15841
102 Ga0496117_0005099 3300048920 Bacteria 14043
103 Ga0496117_0007306 3300048920 Bacteria 10843
104 Ga0496117_0047671 3300048920 Bacteria 3069
105 Ga0496118_0002209 3300048921 Bacteria 27013
106 Ga0496118_0005737 3300048921 Bacteria 13968
107 Ga0496118_0012057 3300048921 Bacteria 8345
108 Ga0496118_0015484 3300048921 Bacteria 7057
109 Ga0496118_0020157 3300048921 Bacteria 5925
110 Ga0496119_0002984 3300048922 Bacteria 17964
111 Ga0496119_0005398 3300048922 Bacteria 12278
112 Ga0496119_0005762 3300048922 Bacteria 11735
113 Ga0496119_0006303 3300048922 Bacteria 11046
114 Ga0496119_0006986 3300048922 Bacteria 10287
115 Ga0496119_0037701 3300048922 Bacteria 3136
116 Ga0496120_0000456 3300048923 Bacteria 64535
117 Ga0496120_0001790 3300048923 Bacteria 24153
118 Ga0496120_0003107 3300048923 Bacteria 15604
119 Ga0496120_0005254 3300048923 Bacteria 10404
120 Ga0496120_0005308 3300048923 Bacteria 10332
121 Ga0496122_0000055 3300048925 Bacteria 258485
122 Ga0496122_0000377 3300048925 Bacteria 95371
123 Ga0496122_0031021 3300048925 Bacteria 4460
124 Ga0496122_0037462 3300048925 Bacteria 3903
125 Ga0496122_0093706 3300048925 Bacteria 2036
126 Ga0496123_0000003 3300048926 Bacteria 866556
127 Ga0496123_0000169 3300048926 Bacteria 130983
128 Ga0496123_0006755 3300048926 Bacteria 11028
129 Ga0496123_0031764 3300048926 Bacteria 3835
130 Ga0496124_0000134 3300048927 Bacteria 153436
131 Ga0496124_0006992 3300048927 Bacteria 12095
132 Ga0496124_0015530 3300048927 Bacteria 7291
133 Ga0496124_0023843 3300048927 Bacteria 5576
134 Ga0496124_0069111 3300048927 Bacteria 2933
135 Ga0496124_0134238 3300048927 Bacteria 1962
136 Ga0496125_0002995 3300048928 Bacteria 21140
137 Ga0496125_0007507 3300048928 Bacteria 11589
138 Ga0496125_0011301 3300048928 Bacteria 8947
139 Ga0496125_0048215 3300048928 Bacteria 3554
140 Ga0496125_0088963 3300048928 Bacteria 2325
141 Ga0496126_0000436 3300048929 Bacteria 83469
142 Ga0496126_0006051 3300048929 Bacteria 13576
143 Ga0496126_0006441 3300048929 Bacteria 13083
144 Ga0496126_0025183 3300048929 Bacteria 5729
145 Ga0496126_0041557 3300048929 Bacteria 4253
146 Ga0501031_0046358 3300049568 Bacteria 2834
147 Ga0501032_0043563 3300049569 Bacteria 3038
148 Ga0501033_0022202 3300049570 Bacteria 4788
149 Ga0501033_0141249 3300049570 Bacteria 1740
150 Ga0501034_0000851 3300049571 Bacteria 45168
151 Ga0501034_0025730 3300049571 Bacteria 5993
152 Ga0501034_0033836 3300049571 Bacteria 5181
153 Ga0501034_0066216 3300049571 Bacteria 3625
154 Ga0501034_0150168 3300049571 Bacteria 2306
155 Ga0501034_0182474 3300049571 Bacteria 2063
156 Ga0501036_0024781 3300049572 Bacteria 5058
157 Ga0501037_0019966 3300049573 Bacteria 4946
158 Ga0501037_0090256 3300049573 Bacteria 2216
159 Ga0501038_0003816 3300049574 Bacteria 14016
160 Ga0501038_0100767 3300049574 Bacteria 2405
161 Ga0501039_0012284 3300049575 Bacteria 6530
162 Ga0501043_0004639 3300049579 Bacteria 11140
163 Ga0501043_0041264 3300049579 Bacteria 3625
164 Ga0501046_0024145 3300049580 Bacteria 4992
165 Ga0501047_0045503 3300049581 Bacteria 4244
166 Ga0501048_0076707 3300049582 Bacteria 2358
167 Ga0501070_0000786 3300049586 Bacteria 28832
168 Ga0501070_0001897 3300049586 Bacteria 18498
169 Ga0501070_0013341 3300049586 Bacteria 6930
170 Ga0501071_0000783 3300049587 Bacteria 16919
171 Ga0501073_0034879 3300049589 Bacteria 3578
172 Ga0501073_0076850 3300049589 Bacteria 2323
173 Ga0501080_0000084 3300049742 Bacteria 62784
174 Ga0501080_0008078 3300049742 Bacteria 9537
175 Ga0501035_0033406 3300049822 Bacteria 4678
176 Ga0501035_0042659 3300049822 Bacteria 4091
177 Ga0501035_0228975 3300049822 Bacteria 1584
178 Ga0501044_0026863 3300049823 Bacteria 6092
179 Ga0501044_0027288 3300049823 Bacteria 6036
180 Ga0501044_0240442 3300049823 Bacteria 1754
181 nmdc:mga00v17_30793_c1 3300050491 Bacteria 3158
182 nmdc:mga00v17_46140_c1 3300050491 Bacteria 2635
183 nmdc:mga06z11_6658_c1 3300050494 Bacteria 4722
184 Ga0500559_0000102 3300053136 Bacteria 66427
185 Ga0500559_0001171 3300053136 Bacteria 15721
186 Ga0500559_0005002 3300053136 Bacteria 6154
187 Ga0500573_0000059 3300053140 Bacteria 71066
188 Ga0500573_0042397 3300053140 Bacteria 2628
189 Ga0500573_0051447 3300053140 Bacteria 2368
190 Ga0501084_0051691 3300054114 Bacteria 3440

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009545 Ga0105237_10002645 Ga0105237_1000264517 441
2 3300009551 Ga0105238_10020923 Ga0105238_100209236 441
3 3300048921 Ga0496118_0020157 Ga0496118_0020157_3453_4979 446
4 3300048922 Ga0496119_0006303 Ga0496119_0006303_6788_8314 446
5 3300048923 Ga0496120_0000456 Ga0496120_0000456_96_1622 446
6 3300048923 Ga0496120_0005254 Ga0496120_0005254_1420_2946 452
7 3300049569 Ga0501032_0043563 Ga0501032_0043563_27_1508 454
8 3300049571 Ga0501034_0066216 Ga0501034_0066216_27_1508 454
9 3300049573 Ga0501037_0090256 Ga0501037_0090256_709_2190 454
10 3300049574 Ga0501038_0100767 Ga0501038_0100767_27_1508 454
11 3300049579 Ga0501043_0041264 Ga0501043_0041264_27_1508 454
12 3300049580 Ga0501046_0024145 Ga0501046_0024145_27_1508 454
13 3300049582 Ga0501048_0076707 Ga0501048_0076707_27_1508 454
14 3300049589 Ga0501073_0034879 Ga0501073_0034879_27_1508 454
15 3300049589 Ga0501073_0076850 Ga0501073_0076850_27_1508 454
16 iso_pu_bacteria 2643221549 2643767410 456
17 3300005616 Ga0068852_100019117 Ga0068852_1000191174 459
18 3300026142 Ga0207698_10000464 Ga0207698_1000046419 459
19 3300005577 Ga0068857_100018988 Ga0068857_1000189882 460
20 3300026116 Ga0207674_10001204 Ga0207674_1000120421 460
21 3300046471 Ga0495650_0000763 Ga0495650_0000763_1809_3326 460
22 3300053140 Ga0500573_0042397 Ga0500573_0042397_444_2003 460
23 3300005834 Ga0068851_10000020 Ga0068851_10000020101 461
24 3300009093 Ga0105240_10010645 Ga0105240_100106457 461
25 3300009174 Ga0105241_10000260 Ga0105241_1000026010 461
26 3300025321 Ga0207656_10000003 Ga0207656_1000000324 461
27 3300025914 Ga0207671_10000002 Ga0207671_1000000286 461
28 3300025924 Ga0207694_10000073 Ga0207694_1000007321 461
29 iso_pu_bacteria 2643221619 2644110631 461
30 3300044765 Ga0466970_0038094 Ga0466970_0038094_493_2037 462
31 3300048905 Ga0496102_0182839 Ga0496102_0182839_267_1730 462
32 3300003760 Ga0055527_1000001 Ga0055527_1000001566 466
33 3300003763 Ga0055529_1000019 Ga0055529_100001972 466
34 3300025228 Ga0209672_100006 Ga0209672_100006409 466
35 3300025229 Ga0209147_101283 Ga0209147_1012832 466
36 3300025254 Ga0209148_1000015 Ga0209148_1000015253 466
37 3300025272 Ga0209455_1000013 Ga0209455_1000013253 466
38 3300025909 Ga0207705_10048769 Ga0207705_100487691 467
39 3300047320 Ga0495672_0016666 Ga0495672_0016666_415_1917 467
40 3300049573 Ga0501037_0019966 Ga0501037_0019966_2263_3792 467
41 3300049579 Ga0501043_0004639 Ga0501043_0004639_4117_5646 467
42 3300049586 Ga0501070_0000786 Ga0501070_0000786_17456_18985 467
43 3300049742 Ga0501080_0000084 Ga0501080_0000084_10536_12065 467
44 3300054114 Ga0501084_0051691 Ga0501084_0051691_256_1785 467
45 iso_pu_bacteria 2904501621 2904502690 467
46 iso_pu_bacteria 2908674828 2908677627 467
47 iso_pu_bacteria 2928500415 2928501563 467
48 3300048929 Ga0496126_0006441 Ga0496126_0006441_2820_4304 468
49 3300009093 Ga0105240_10271720 Ga0105240_102717202 469
50 3300048920 Ga0496117_0005099 Ga0496117_0005099_12308_13891 470
51 3300048921 Ga0496118_0005737 Ga0496118_0005737_151_1734 470
52 3300049570 Ga0501033_0141249 Ga0501033_0141249_183_1709 470
53 3300049822 Ga0501035_0228975 Ga0501035_0228975_34_1560 470
54 iso_pu_bacteria 2821268502 2821269472 470
55 3300048926 Ga0496123_0031764 Ga0496123_0031764_1374_2972 471
56 3300053136 Ga0500559_0000102 Ga0500559_0000102_54583_56127 471
57 3300048903 Ga0496100_0003508 Ga0496100_0003508_5563_7107 472
58 3300048904 Ga0496101_0004625 Ga0496101_0004625_5702_7246 472
59 3300048907 Ga0496104_0003964 Ga0496104_0003964_6538_8082 472
60 3300048908 Ga0496105_0032382 Ga0496105_0032382_1080_2624 472
61 3300048910 Ga0496107_0006598 Ga0496107_0006598_3396_4940 472
62 3300048929 Ga0496126_0025183 Ga0496126_0025183_2104_3648 472
63 3300013102 Ga0157371_10002137 Ga0157371_1000213715 473
64 3300050491 nmdc:mga00v17_30793_c1 nmdc:mga00v17_30793_c1_915_2477 474
65 3300050494 nmdc:mga06z11_6658_c1 nmdc:mga06z11_6658_c1_218_1780 474
66 3300048921 Ga0496118_0012057 Ga0496118_0012057_714_2297 475
67 3300049571 Ga0501034_0182474 Ga0501034_0182474_386_1969 475
68 3300020069 Ga0197907_11463701 Ga0197907_114637012 476
69 3300037312 Ga0395899_0008977 Ga0395899_0008977_5652_7205 476
70 3300049568 Ga0501031_0046358 Ga0501031_0046358_1258_2820 476
71 3300049570 Ga0501033_0022202 Ga0501033_0022202_1795_3357 476
72 3300049572 Ga0501036_0024781 Ga0501036_0024781_1724_3286 476
73 3300049575 Ga0501039_0012284 Ga0501039_0012284_1058_2620 476
74 3300049587 Ga0501071_0000783 Ga0501071_0000783_9786_11321 476
75 3300049742 Ga0501080_0008078 Ga0501080_0008078_3031_4593 476
76 3300049822 Ga0501035_0033406 Ga0501035_0033406_2955_4517 476
77 3300049823 Ga0501044_0026863 Ga0501044_0026863_2801_4363 476
78 3300049823 Ga0501044_0027288 Ga0501044_0027288_3597_5159 476
79 3300049571 Ga0501034_0033836 Ga0501034_0033836_2848_4404 477
80 3300049581 Ga0501047_0045503 Ga0501047_0045503_492_2048 477
81 3300049822 Ga0501035_0042659 Ga0501035_0042659_881_2437 477
82 3300049823 Ga0501044_0240442 Ga0501044_0240442_12_1574 477
83 iso_pu_bacteria 2643221542 2643734060 477
84 iso_pu_bacteria 2643221630 2644170648 477
85 iso_pu_bacteria 2643221724 2644679730 477
86 iso_pu_bacteria 2728369380 2730229257 477
87 iso_pu_bacteria 2747842429 2747953334 477
88 iso_pu_bacteria 2852663356 2852664828 477
89 iso_pu_bacteria 2857723135 2857723421 477
90 iso_pu_bacteria 2946080515 2946081333 477
91 3300005614 Ga0068856_100036778 Ga0068856_1000367784 478
92 3300025254 Ga0209148_1003839 Ga0209148_10038392 478
93 3300025911 Ga0207654_10000003 Ga0207654_10000003239 478
94 3300025913 Ga0207695_10013661 Ga0207695_100136612 478
95 3300003752 Ga0055539_1000005 Ga0055539_100000512 481
96 3300003756 Ga0055533_1000001 Ga0055533_10000011081 481
97 3300003759 Ga0055525_1000297 Ga0055525_100029724 481
98 3300025225 Ga0209566_100240 Ga0209566_10024030 481
99 3300025226 Ga0209674_100001 Ga0209674_1000011081 481
100 3300025230 Ga0209563_100001 Ga0209563_1000011081 481
101 3300025253 Ga0209677_100001 Ga0209677_1000011081 481
102 3300031901 Ga0307406_10007875 Ga0307406_100078752 481
103 3300031901 Ga0307406_10017595 Ga0307406_100175952 481
104 3300031911 Ga0307412_10034688 Ga0307412_100346882 481
105 3300037418 Ga0395900_0001424 Ga0395900_0001424_6733_8253 481
106 3300037466 Ga0395898_0000015 Ga0395898_0000015_134061_135581 481
107 3300044683 Ga0466965_0000015 Ga0466965_0000015_62377_63939 481
108 3300048922 Ga0496119_0002984 Ga0496119_0002984_3357_4940 481
109 3300048925 Ga0496122_0000377 Ga0496122_0000377_60139_61722 481
110 3300048925 Ga0496122_0037462 Ga0496122_0037462_138_1760 481
111 3300048926 Ga0496123_0000169 Ga0496123_0000169_20382_21965 481
112 3300048927 Ga0496124_0023843 Ga0496124_0023843_2170_3753 481
113 iso_pu_bacteria 2852677369 2852679516 481
114 3300005327 Ga0070658_10018762 Ga0070658_100187622 482
115 3300025909 Ga0207705_10065465 Ga0207705_100654652 482
116 3300025949 Ga0207667_10003213 Ga0207667_100032138 482
117 iso_pu_bacteria 2897561785 2897563545 482
118 iso_pu_bacteria 2585428094 2587862517 483
119 iso_pu_bacteria 2643221649 2644279255 483
120 3300049586 Ga0501070_0001897 Ga0501070_0001897_11886_13430 484
121 iso_pu_bacteria 2946033335 2946034176 484
122 3300053136 Ga0500559_0001171 Ga0500559_0001171_9517_11055 485
123 iso_pu_bacteria 2643221616 2644097078 485
124 iso_pu_bacteria 2844841374 2844842752 485
125 iso_pu_bacteria 2857720070 2857722597 485
126 iso_pu_bacteria 2857729791 2857732498 485
127 iso_pu_bacteria 2857737099 2857739957 485
128 iso_pu_bacteria 2862993130 2862996464 485
129 iso_pu_bacteria 2884763398 2884765730 485
130 iso_pu_bacteria 2904430863 2904433188 485
131 iso_pu_bacteria 2909074476 2909075200 485
132 iso_pu_bacteria 2919039151 2919040613 485
133 iso_pu_bacteria 2919042368 2919043601 485
134 iso_pu_bacteria 2919055335 2919058458 485
135 iso_pu_bacteria 2928090899 2928091304 485
136 iso_pu_bacteria 2928104781 2928108255 485
137 iso_pu_bacteria 2928121344 2928122840 485
138 iso_pu_bacteria 2928153084 2928156248 485
139 iso_pu_bacteria 2964326757 2964326846 485
140 3300003578 Ga0006562J51391_1010188 Ga0006562J51391_10101881 486
141 3300003578 Ga0006562J51391_1010190 Ga0006562J51391_10101903 486
142 3300013307 Ga0157372_10059370 Ga0157372_100593702 486
143 3300048907 Ga0496104_0057156 Ga0496104_0057156_1707_3398 486
144 3300048914 Ga0496111_0058830 Ga0496111_0058830_324_2015 486
145 3300048918 Ga0496115_0048844 Ga0496115_0048844_1388_3079 486
146 3300048919 Ga0496116_0026741 Ga0496116_0026741_1232_3016 486
147 3300048920 Ga0496117_0000028 Ga0496117_0000028_286579_288246 486
148 3300048921 Ga0496118_0015484 Ga0496118_0015484_950_2560 486
149 3300048922 Ga0496119_0005398 Ga0496119_0005398_4638_6305 486
150 3300048922 Ga0496119_0005762 Ga0496119_0005762_8773_10557 486
151 3300048922 Ga0496119_0037701 Ga0496119_0037701_801_2492 486
152 3300048923 Ga0496120_0001790 Ga0496120_0001790_20310_21977 486
153 3300048923 Ga0496120_0003107 Ga0496120_0003107_7851_9635 486
154 3300048923 Ga0496120_0005308 Ga0496120_0005308_5169_6836 486
155 3300048925 Ga0496122_0000055 Ga0496122_0000055_91992_93776 486
156 3300048925 Ga0496122_0031021 Ga0496122_0031021_2344_4011 486
157 3300048926 Ga0496123_0000003 Ga0496123_0000003_708817_710601 486
158 3300048926 Ga0496123_0006755 Ga0496123_0006755_1440_3107 486
159 3300048927 Ga0496124_0006992 Ga0496124_0006992_8828_10495 486
160 3300048927 Ga0496124_0015530 Ga0496124_0015530_5092_6876 486
161 3300048928 Ga0496125_0007507 Ga0496125_0007507_8176_9843 486
162 3300048928 Ga0496125_0048215 Ga0496125_0048215_1567_3177 486
163 3300048929 Ga0496126_0000436 Ga0496126_0000436_48851_50518 486
164 3300049571 Ga0501034_0025730 Ga0501034_0025730_95_1630 486
165 3300049586 Ga0501070_0013341 Ga0501070_0013341_261_1796 486
166 3300053140 Ga0500573_0051447 Ga0500573_0051447_766_2310 486
167 iso_pu_bacteria 2585428157 2588106655 486
168 iso_pu_bacteria 2643221553 2643785378 486
169 iso_pu_bacteria 2757320536 2758224313 486
170 iso_pu_bacteria 2808606306 2808631653 486
171 iso_pu_bacteria 2974294766 2974297932 486
172 iso_pu_bacteria 2984580707 2984581945 486
173 iso_pu_bacteria 8016254467 8016254589 486
174 3300005327 Ga0070658_10000616 Ga0070658_1000061617 487
175 3300005563 Ga0068855_100057158 Ga0068855_1000571582 487
176 3300006038 Ga0075365_10036144 Ga0075365_100361442 487
177 3300006051 Ga0075364_10019869 Ga0075364_100198692 487
178 3300013104 Ga0157370_10001273 Ga0157370_100012735 487
179 3300013250 Ga0171462_1001 Ga0171462_1001156 487
180 3300025909 Ga0207705_10000006 Ga0207705_10000006572 487
181 3300025949 Ga0207667_10104451 Ga0207667_101044512 487
182 3300042007 Ga0439449_0023127 Ga0439449_0023127_590_2254 487
183 3300044683 Ga0466965_0062885 Ga0466965_0062885_169_1833 487
184 3300046530 Ga0495654_0014467 Ga0495654_0014467_1917_3533 487
185 3300046543 Ga0495645_0027699 Ga0495645_0027699_1487_3154 487
186 3300048908 Ga0496105_0030327 Ga0496105_0030327_510_2165 487
187 3300048912 Ga0496109_0041541 Ga0496109_0041541_2279_3934 487
188 3300048919 Ga0496116_0084914 Ga0496116_0084914_50_1708 487
189 3300048922 Ga0496119_0006986 Ga0496119_0006986_707_2371 487
190 3300048927 Ga0496124_0134238 Ga0496124_0134238_21_1679 487
191 3300050491 nmdc:mga00v17_46140_c1 nmdc:mga00v17_46140_c1_998_2611 487
192 3300053136 Ga0500559_0005002 Ga0500559_0005002_4066_5604 487
193 iso_pu_bacteria 2643221566 2643849471 487
194 iso_pu_bacteria 2643221575 2643888627 487
195 iso_pu_bacteria 2643221597 2643996302 487
196 iso_pu_bacteria 2773857758 2774381417 487
197 iso_pu_bacteria 2773857763 2774400108 487
198 iso_pu_bacteria 2811994872 2812322548 487
199 iso_pu_bacteria 2833709550 2833710373 487
200 iso_pu_bacteria 2870628048 2870629822 487
201 iso_pu_bacteria 2904509784 2904509902 487
202 iso_pu_bacteria 2906799679 2906801143 487
203 iso_pu_bacteria 2908678064 2908678885 487
204 iso_pu_bacteria 2919069694 2919071236 487
205 iso_pu_bacteria 2977228692 2977230787 487
206 iso_pu_bacteria 2977236895 2977239581 487
207 iso_pu_bacteria 2977264416 2977266014 487
208 iso_pu_bacteria 2984542743 2984546148 487
209 iso_pu_bacteria 8045830549 8045832598 487
210 3300005367 Ga0070667_100101181 Ga0070667_1001011812 488
211 3300025246 Ga0209646_1000098 Ga0209646_1000098121 488
212 3300025986 Ga0207658_10080896 Ga0207658_100808962 488
213 3300048920 Ga0496117_0004308 Ga0496117_0004308_12737_14359 488
214 3300048925 Ga0496122_0093706 Ga0496122_0093706_52_1674 488
215 3300048928 Ga0496125_0002995 Ga0496125_0002995_6485_8107 488
216 3300048928 Ga0496125_0011301 Ga0496125_0011301_6743_8365 488
217 3300048928 Ga0496125_0088963 Ga0496125_0088963_163_1785 488
218 3300048929 Ga0496126_0006051 Ga0496126_0006051_3386_5008 488
219 3300049571 Ga0501034_0000851 Ga0501034_0000851_38311_39933 488
220 iso_pu_bacteria 2643221546 2643754120 488
221 iso_pu_bacteria 2643221635 2644199426 488
222 iso_pu_bacteria 2852646457 2852646968 488
223 iso_pu_bacteria 2919523602 2919524841 488
224 iso_pu_bacteria 2945968032 2945971419 488
225 iso_pu_bacteria 2946041624 2946043753 488
226 iso_pu_bacteria 8004182704 8004185516 488
227 3300001990 JGI24737J22298_10003827 JGI24737J22298_100038272 489
228 3300002067 JGI24735J21928_10005249 JGI24735J21928_100052492 489
229 3300003578 Ga0006562J51391_1007855 Ga0006562J51391_10078555 489
230 3300003578 Ga0006562J51391_1007856 Ga0006562J51391_10078562 489
231 3300005437 Ga0070710_10022762 Ga0070710_100227622 489
232 3300005617 Ga0068859_100134998 Ga0068859_1001349982 489
233 3300006038 Ga0075365_10021120 Ga0075365_100211203 489
234 3300006051 Ga0075364_10039802 Ga0075364_100398022 489
235 3300006353 Ga0075370_10014225 Ga0075370_100142254 489
236 3300013105 Ga0157369_10004048 Ga0157369_100040487 489
237 3300014325 Ga0163163_10175353 Ga0163163_101753532 489
238 3300020081 Ga0206354_11603342 Ga0206354_116033422 489
239 3300020082 Ga0206353_10143035 Ga0206353_101430352 489
240 3300025253 Ga0209677_106545 Ga0209677_1065452 489
241 3300025272 Ga0209455_1001100 Ga0209455_10011004 489
242 3300025898 Ga0207692_10030244 Ga0207692_100302442 489
243 3300031649 Ga0307514_10012670 Ga0307514_100126704 489
244 3300037418 Ga0395900_0092695 Ga0395900_0092695_1250_2803 489
245 3300037418 Ga0395900_0156915 Ga0395900_0156915_94_1656 489
246 3300045836 Ga0466958_0019139 Ga0466958_0019139_1806_3416 489
247 3300046457 Ga0495590_0000279 Ga0495590_0000279_12514_14082 489
248 3300046689 Ga0495613_0093245 Ga0495613_0093245_567_2114 489
249 3300048920 Ga0496117_0007306 Ga0496117_0007306_2843_4516 489
250 3300048920 Ga0496117_0047671 Ga0496117_0047671_809_2362 489
251 3300048921 Ga0496118_0002209 Ga0496118_0002209_14806_16479 489
252 3300048927 Ga0496124_0000134 Ga0496124_0000134_1528_3201 489
253 3300048927 Ga0496124_0069111 Ga0496124_0069111_172_1857 489
254 3300048929 Ga0496126_0041557 Ga0496126_0041557_903_2459 489
255 3300049571 Ga0501034_0150168 Ga0501034_0150168_282_1865 489
256 3300049574 Ga0501038_0003816 Ga0501038_0003816_1720_3330 489
257 3300053140 Ga0500573_0000059 Ga0500573_0000059_39454_41013 489
258 iso_pu_bacteria 2751185788 2753301626 489
259 iso_pu_bacteria 2808606447 2809226946 489
260 iso_pu_bacteria 2852632344 2852633137 489
261 iso_pu_bacteria 2966924647 2966924707 489
262 iso_pu_bacteria 2984551494 2984553819 489
263 iso_pu_bacteria 8004212874 8004214590 489

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01225

Mur_ligase

Mur ligase family, catalytic domain

80

157

0.95

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

405

534

0.95

PF08245

Mur_ligase_M

Mur ligase middle domain

171

380

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.8322 17 486
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.8262 20 481
7waf-assembly1.cif.gz_B trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.8235 96 457
8g6p-assembly1.cif.gz_A crystal structure of mycobacterium thermoresistibile mure in complex with adp and 2,6-diaminopimelic acid 0.8191 8 482
2y68-assembly1.cif.gz_A structure-based design of a new series of d-glutamic acid-based inhibitors of bacterial murd ligase 0.8121 93 484
ID Description Score Start End Superfamily
4bubB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.938 337 483 3.90.190.20
2wtzA03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.937 327 481 3.90.190.20
2wtzD03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9192 340 478 3.90.190.20
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9114 330 473 3.90.190.20
2wtzA02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9092 96 326 3.40.1190.10
ID Description Score Start End GO Terms
AF-A0A7V7ASP6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9672 344 484 GO:0009058
GO:0016881
AF-A0A7V4AN84-F1-model_v4 UDP-N-acetylmuramyl peptide synthase 0.9656 340 486 GO:0009058
GO:0016881
AF-A0A6B3EYF2-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9635 330 437 GO:0009058
GO:0016881
AF-A0A523ELD4-F1-model_v4 Mur ligase C-terminal domain-containing protein 0.9614 355 484 GO:0009058
GO:0016881
AF-A0A7C3UWK1-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9601 347 481 GO:0009058
GO:0016881

Feature Viewer

pLDDT pTM Quality
87.13 0.83 High
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Predicted Structure (AlphaFold2)

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