F371233

General Info

Members Datasets Scaffolds Average Seq Length
262 149 524 296

Family's Representative Sequence

Representative Sequence 3300036401|Ga0373937_0192762|Ga0373937_0192762_150_1178
Length 334
Sequence MGAPLVPKRILRHCGLEGNRVESLWEFRLFNYDLAENMTMISNRRTFVKAAIGGVAGLSLSGRMFGQAAPGASTVKLADDLYILTLPGEANVIVQTDAKGALLVDGGSAAGSDALLKAVAGLPGSGPVHTLFNTHWHPEQTGSNERLGKAGATIIAHENTRLWLGQNITWPWNGKKFAKLPKVAQPNKTFYTTGKLDSDVRYGYIADAAHTDGDMYVYFPKQNVLAVGGAVYGQGWPEMDWWTGGLQRLQTVANADTRIVPAVGPVLSLADLKTQLDMYGKIYDTLSQMMNKGRGPTEAVAAQPAKEYEAKMGNSDLFIRRSFESLWAYLSPDA

Samples

Sample ID Description Type Environment
1 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
107 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
108 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
109 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
110 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
111 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
112 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
115 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
123 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
126 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
127 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
128 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
129 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
133 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
145 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.85
Metatranscriptomes 1.15
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.53
Nodule 0
Rhizoplane 0.38
Rhizosphere 96.56
Stem 0
Stem Tuber 0
Unclassified 25.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373937_0192762 3300036401 Unclassified 1915
2 Ga0058863_11521366 3300004799 Unclassified 1167
3 Ga0070676_10012870 3300005328 Unclassified 4579
4 Ga0070676_10236817 3300005328 Unclassified 1212
5 Ga0070683_100051844 3300005329 Unclassified 3800
6 Ga0070690_100008399 3300005330 Bacteria 5946
7 Ga0070690_100033359 3300005330 Bacteria 3222
8 Ga0070690_100045117 3300005330 Unclassified 2799
9 Ga0070690_100303753 3300005330 Unclassified 1145
10 Ga0070670_100003195 3300005331 Bacteria 13515
11 Ga0070670_100011396 3300005331 Bacteria 7603
12 Ga0070677_10060966 3300005333 Bacteria 1556
13 Ga0068869_100045689 3300005334 Unclassified 3154
14 Ga0070666_10001112 3300005335 Bacteria 16435
15 Ga0070666_10144650 3300005335 Bacteria 1657
16 Ga0068868_100000238 3300005338 Bacteria 37158
17 Ga0070689_100012912 3300005340 Bacteria 6031
18 Ga0070689_100075256 3300005340 Bacteria 2643
19 Ga0070661_100135110 3300005344 Bacteria 1855
20 Ga0070661_100147758 3300005344 Bacteria 1775
21 Ga0070692_10248311 3300005345 Bacteria 1064
22 Ga0070669_100007627 3300005353 Bacteria 7733
23 Ga0070675_100003122 3300005354 Bacteria 12529
24 Ga0070675_100097332 3300005354 Unclassified 2474
25 Ga0070675_100214970 3300005354 Bacteria 1673
26 Ga0070675_100219473 3300005354 Bacteria 1655
27 Ga0070675_100236074 3300005354 Bacteria 1596
28 Ga0070675_100380590 3300005354 Bacteria 1256
29 Ga0070671_100044552 3300005355 Unclassified 3687
30 Ga0070673_100002130 3300005364 Bacteria 11989
31 Ga0070673_100004518 3300005364 Bacteria 8807
32 Ga0070673_100157100 3300005364 Bacteria 1931
33 Ga0070673_100260966 3300005364 Bacteria 1513
34 Ga0070659_100273586 3300005366 Unclassified 1404
35 Ga0070667_100008173 3300005367 Bacteria 8673
36 Ga0070667_100009291 3300005367 Bacteria 8148
37 Ga0070701_10052647 3300005438 Bacteria 2116
38 Ga0070700_100124957 3300005441 Bacteria 1729
39 Ga0070678_100099645 3300005456 Bacteria 2249
40 Ga0070678_100141280 3300005456 Unclassified 1927
41 Ga0070678_100182502 3300005456 Bacteria 1719
42 Ga0070678_100193872 3300005456 Bacteria 1672
43 Ga0070681_10003717 3300005458 Bacteria 14316
44 Ga0070685_10004590 3300005466 Bacteria 6989
45 Ga0070707_100034658 3300005468 Unclassified 4816
46 Ga0070684_100005277 3300005535 Bacteria 9889
47 Ga0070684_100026744 3300005535 Bacteria 4863
48 Ga0068853_100092454 3300005539 Bacteria 2661
49 Ga0070672_100001965 3300005543 Bacteria 12881
50 Ga0070672_100009495 3300005543 Bacteria 6709
51 Ga0070672_100124041 3300005543 Bacteria 2117
52 Ga0070686_100013051 3300005544 Bacteria 4744
53 Ga0070686_100014745 3300005544 Bacteria 4510
54 Ga0070686_100027983 3300005544 Unclassified 3415
55 Ga0070686_100033813 3300005544 Bacteria 3145
56 Ga0070665_100002696 3300005548 Bacteria 19272
57 Ga0070704_100047215 3300005549 Unclassified 3008
58 Ga0070664_100006750 3300005564 Bacteria 9254
59 Ga0070664_100018206 3300005564 Bacteria 5765
60 Ga0070664_100032718 3300005564 Unclassified 4351
61 Ga0070664_100198712 3300005564 Unclassified 1788
62 Ga0070664_100354515 3300005564 Unclassified 1335
63 Ga0068857_100044164 3300005577 Bacteria 3952
64 Ga0068856_100497510 3300005614 Bacteria 1240
65 Ga0068859_100000327 3300005617 Bacteria 47368
66 Ga0068859_100179745 3300005617 Bacteria 2198
67 Ga0068864_100012267 3300005618 Bacteria 7082
68 Ga0068863_100001121 3300005841 Bacteria 26742
69 Ga0068863_100001177 3300005841 Bacteria 26139
70 Ga0068863_100170312 3300005841 Unclassified 2088
71 Ga0068858_100039371 3300005842 Bacteria 4383
72 Ga0068858_100049444 3300005842 Unclassified 3894
73 Ga0068858_100049766 3300005842 Unclassified 3880
74 Ga0068858_100110199 3300005842 Unclassified 2570
75 Ga0068858_100238384 3300005842 Bacteria 1725
76 Ga0068858_100342493 3300005842 Bacteria 1431
77 Ga0068860_100003578 3300005843 Bacteria 15971
78 Ga0068860_100042195 3300005843 Unclassified 4358
79 Ga0068862_100043287 3300005844 Unclassified 3838
80 Ga0068862_100093643 3300005844 Bacteria 2620
81 Ga0068862_100306864 3300005844 Unclassified 1462
82 Ga0081539_10000028 3300005985 Bacteria 328182
83 Ga0097621_100059503 3300006237 Bacteria 3128
84 Ga0097621_100142681 3300006237 Bacteria 2048
85 Ga0097621_100261751 3300006237 Unclassified 1517
86 Ga0068871_100009240 3300006358 Bacteria 7131
87 Ga0068871_100019541 3300006358 Bacteria 5174
88 Ga0068871_100069874 3300006358 Bacteria 2885
89 Ga0068871_100277034 3300006358 Bacteria 1466
90 Ga0075428_100008974 3300006844 Bacteria 11092
91 Ga0075433_10230581 3300006852 Unclassified 1644
92 Ga0075434_100013951 3300006871 Bacteria 7668
93 Ga0075429_100076534 3300006880 Unclassified 2915
94 Ga0075429_100081202 3300006880 Unclassified 2827
95 Ga0097620_100000327 3300006931 Bacteria 47368
96 Ga0097620_100179743 3300006931 Bacteria 2198
97 Ga0111539_10074243 3300009094 Bacteria 4007
98 Ga0111539_10104487 3300009094 Bacteria 3323
99 Ga0111539_10335206 3300009094 Bacteria 1761
100 Ga0105245_10088175 3300009098 Unclassified 2849
101 Ga0114129_10015747 3300009147 Bacteria 10749
102 Ga0105248_10004844 3300009177 Bacteria 14901
103 Ga0105248_10024499 3300009177 Bacteria 6709
104 Ga0105248_10033801 3300009177 Bacteria 5714
105 Ga0105249_10002086 3300009553 Bacteria 17324
106 Ga0157370_10011333 3300013104 Bacteria 9337
107 Ga0157374_10051704 3300013296 Unclassified 3824
108 Ga0157374_10068471 3300013296 Bacteria 3340
109 Ga0157374_10170175 3300013296 Bacteria 2125
110 Ga0157378_10019763 3300013297 Bacteria 5923
111 Ga0157378_10079535 3300013297 Bacteria 2960
112 Ga0157378_10855301 3300013297 Unclassified 938
113 Ga0163162_10006694 3300013306 Bacteria 11173
114 Ga0163162_10059787 3300013306 Unclassified 3843
115 Ga0157375_10000538 3300013308 Bacteria 33986
116 Ga0157375_10010102 3300013308 Bacteria 8299
117 Ga0157375_10169769 3300013308 Bacteria 2328
118 Ga0157375_10171899 3300013308 Unclassified 2315
119 Ga0163163_10027731 3300014325 Bacteria 5429
120 Ga0163163_10030236 3300014325 Bacteria 5216
121 Ga0163163_10039253 3300014325 Bacteria 4620
122 Ga0163163_10056846 3300014325 Unclassified 3867
123 Ga0163163_10342652 3300014325 Unclassified 1550
124 Ga0157380_10002835 3300014326 Bacteria 11783
125 Ga0157379_10001214 3300014968 Bacteria 20949
126 Ga0157379_10162676 3300014968 Bacteria 2014
127 Ga0157379_10250309 3300014968 Bacteria 1608
128 Ga0157376_10177951 3300014969 Unclassified 1942
129 Ga0206356_10779923 3300020070 Bacteria 1097
130 Ga0206352_10560181 3300020078 Bacteria 6850
131 Ga0213876_10151972 3300021384 Unclassified 1231
132 Ga0213875_10047786 3300021388 Bacteria 2007
133 Ga0207697_10000897 3300025315 Bacteria 16848
134 Ga0207688_10019658 3300025901 Unclassified 3682
135 Ga0207680_10003928 3300025903 Bacteria 7016
136 Ga0207680_10162549 3300025903 Bacteria 1499
137 Ga0207645_10133336 3300025907 Unclassified 1617
138 Ga0207654_10004610 3300025911 Bacteria 6957
139 Ga0207707_10000239 3300025912 Bacteria 59651
140 Ga0207695_10001394 3300025913 Bacteria 40823
141 Ga0207660_10050634 3300025917 Bacteria 2950
142 Ga0207649_10162894 3300025920 Unclassified 1547
143 Ga0207652_10014039 3300025921 Bacteria 6484
144 Ga0207646_10015142 3300025922 Bacteria 7295
145 Ga0207681_10029014 3300025923 Unclassified 3588
146 Ga0207694_10001414 3300025924 Bacteria 20570
147 Ga0207650_10008976 3300025925 Bacteria 6833
148 Ga0207650_10020408 3300025925 Unclassified 4672
149 Ga0207659_10006947 3300025926 Bacteria 6954
150 Ga0207659_10012377 3300025926 Bacteria 5425
151 Ga0207659_10018087 3300025926 Bacteria 4614
152 Ga0207659_10027924 3300025926 Bacteria 3828
153 Ga0207659_10065036 3300025926 Bacteria 2642
154 Ga0207644_10021063 3300025931 Unclassified 4439
155 Ga0207690_10087358 3300025932 Bacteria 2194
156 Ga0207670_10048696 3300025936 Bacteria 2830
157 Ga0207670_10246375 3300025936 Bacteria 1379
158 Ga0207691_10001139 3300025940 Bacteria 26381
159 Ga0207691_10015079 3300025940 Bacteria 7354
160 Ga0207691_10018215 3300025940 Bacteria 6651
161 Ga0207691_10143278 3300025940 Bacteria 2105
162 Ga0207711_10002542 3300025941 Bacteria 16239
163 Ga0207689_10003398 3300025942 Bacteria 14541
164 Ga0207679_10003438 3300025945 Bacteria 9771
165 Ga0207679_10007486 3300025945 Bacteria 6929
166 Ga0207679_10016128 3300025945 Bacteria 4955
167 Ga0207679_10093558 3300025945 Bacteria 2332
168 Ga0207651_10019517 3300025960 Bacteria 4065
169 Ga0207651_10024105 3300025960 Unclassified 3757
170 Ga0207712_10015101 3300025961 Unclassified 4976
171 Ga0207677_10005152 3300026023 Bacteria 7073
172 Ga0207703_10018139 3300026035 Bacteria 5497
173 Ga0207703_10158528 3300026035 Bacteria 1980
174 Ga0207703_10158759 3300026035 Bacteria 1979
175 Ga0207639_10056040 3300026041 Bacteria 3019
176 Ga0207708_10165201 3300026075 Bacteria 1750
177 Ga0207702_10400984 3300026078 Unclassified 1323
178 Ga0207641_10008397 3300026088 Bacteria 8532
179 Ga0207641_10029167 3300026088 Unclassified 4562
180 Ga0207641_10050319 3300026088 Bacteria 3525
181 Ga0207648_10174536 3300026089 Bacteria 1900
182 Ga0207676_10007227 3300026095 Bacteria 7863
183 Ga0207674_10000035 3300026116 Bacteria 136262
184 Ga0207674_10073216 3300026116 Bacteria 3439
185 Ga0207675_100423411 3300026118 Bacteria 1315
186 Ga0207675_100707670 3300026118 Unclassified 1016
187 Ga0207428_10014656 3300027907 Bacteria 6795
188 Ga0207428_10025356 3300027907 Bacteria 4963
189 Ga0268266_10016979 3300028379 Bacteria 6218
190 Ga0268265_10165645 3300028380 Unclassified 1883
191 Ga0268264_10028500 3300028381 Unclassified 4568
192 Ga0307509_10422270 3300031507 Unclassified 1034
193 Ga0373934_0003143 3300035086 Bacteria 6022
194 Ga0373934_0077018 3300035086 Bacteria 1338
195 Ga0373954_0002365 3300035118 Bacteria 7884
196 Ga0373956_0034921 3300035119 Bacteria 2216
197 Ga0373957_0062447 3300035120 Unclassified 1445
198 Ga0373946_0033222 3300035171 Unclassified 2076
199 Ga0373955_0013995 3300035172 Bacteria 3894
200 Ga0373933_0091971 3300035724 Bacteria 1873
201 Ga0373947_0016959 3300035725 Unclassified 4185
202 Ga0373937_0003402 3300036401 Bacteria 13355
203 Ga0373937_0005503 3300036401 Bacteria 10853
204 Ga0373937_0036632 3300036401 Bacteria 4471
205 Ga0373937_0094577 3300036401 Bacteria 2771
206 Ga0373937_0619734 3300036401 Bacteria 1027
207 Ga0373925_0057505 3300037068 Bacteria 2914
208 Ga0436365_0621413 3300039437 Bacteria 3679
209 Ga0436362_0572244 3300039453 Unclassified 1183
210 Ga0451576_0071361 3300045051 Unclassified 3614
211 Ga0495592_0008675 3300046454 Bacteria 7631
212 Ga0495592_0063689 3300046454 Bacteria 2704
213 Ga0495580_0132804 3300046472 Bacteria 1726
214 Ga0495608_0009118 3300046511 Bacteria 6937
215 Ga0495608_0178970 3300046511 Bacteria 1342
216 Ga0495630_0116566 3300046517 Bacteria 2024
217 Ga0495630_0224415 3300046517 Bacteria 1435
218 Ga0495586_0067594 3300046535 Bacteria 1949
219 Ga0495587_0058428 3300046536 Bacteria 2266
220 Ga0495645_0033642 3300046543 Bacteria 3739
221 Ga0495659_0069328 3300046664 Bacteria 1319
222 Ga0495657_0020267 3300046675 Bacteria 4783
223 Ga0495599_0029072 3300046678 Unclassified 3464
224 Ga0495599_0113480 3300046678 Unclassified 1687
225 Ga0495647_0023753 3300046681 Bacteria 2226
226 Ga0495647_0072718 3300046681 Bacteria 1380
227 Ga0495669_0053830 3300046684 Bacteria 1810
228 Ga0495669_0075178 3300046684 Bacteria 1545
229 Ga0495613_0004151 3300046689 Bacteria 10841
230 Ga0495613_0059513 3300046689 Unclassified 2800
231 Ga0495613_0160704 3300046689 Unclassified 1598
232 Ga0495613_0180151 3300046689 Bacteria 1496
233 Ga0495600_0155795 3300046809 Bacteria 1478
234 Ga0495600_0184868 3300046809 Bacteria 1342
235 Ga0495674_0102604 3300047319 Bacteria 2432
236 Ga0495674_0170540 3300047319 Bacteria 1816
237 Ga0495680_0266064 3300047322 Bacteria 1211
238 Ga0495684_0000708 3300047471 Bacteria 26781
239 Ga0495684_0029598 3300047471 Bacteria 4203
240 Ga0495684_0150978 3300047471 Unclassified 1737
241 Ga0495602_0193935 3300048088 Unclassified 1555
242 Ga0496104_0095817 3300048907 Bacteria 2839
243 Ga0501039_0412849 3300049575 Bacteria 1060
244 nmdc:mga05p37_6356_c1 3300050507 Bacteria 13922
245 nmdc:mga09592_117009_c1 3300050508 Unclassified 2288
246 nmdc:mga09592_142933_c1 3300050508 Unclassified 2063
247 nmdc:mga08y16_103431_c1 3300050511 Bacteria 2965
248 nmdc:mga08y16_26735_c1 3300050511 Bacteria 6080
249 nmdc:mga08y16_36322_c1 3300050511 Bacteria 5175
250 nmdc:mga0n895_16674_c1 3300050512 Bacteria 6748
251 nmdc:mga0rr50_76052_c1 3300050513 Unclassified 2576
252 nmdc:mga0a205_62160_c1 3300050515 Unclassified 3608
253 Ga0495601_0049223 3300053077 Bacteria 2657
254 Ga0495595_0151317 3300053084 Bacteria 1142
255 Ga0495619_0001520 3300053085 Bacteria 15275
256 Ga0495619_0025465 3300053085 Bacteria 3800
257 Ga0495619_0046342 3300053085 Bacteria 2859
258 Ga0495619_0087505 3300053085 Bacteria 2106
259 Ga0500583_0010044 3300053092 Bacteria 3492
260 Ga0500616_0000019 3300053153 Bacteria 549964
261 Ga0500616_0013084 3300053153 Bacteria 4832
262 Ga0500637_0202758 3300053178 Unclassified 1129
263 Ga0373937_0192762
264 Ga0058863_11521366
265 Ga0070676_10012870
266 Ga0070676_10236817
267 Ga0070683_100051844
268 Ga0070690_100008399
269 Ga0070690_100033359
270 Ga0070690_100045117
271 Ga0070690_100303753
272 Ga0070670_100003195
273 Ga0070670_100011396
274 Ga0070677_10060966
275 Ga0068869_100045689
276 Ga0070666_10001112
277 Ga0070666_10144650
278 Ga0068868_100000238
279 Ga0070689_100012912
280 Ga0070689_100075256
281 Ga0070661_100135110
282 Ga0070661_100147758
283 Ga0070692_10248311
284 Ga0070669_100007627
285 Ga0070675_100003122
286 Ga0070675_100097332
287 Ga0070675_100214970
288 Ga0070675_100219473
289 Ga0070675_100236074
290 Ga0070675_100380590
291 Ga0070671_100044552
292 Ga0070673_100002130
293 Ga0070673_100004518
294 Ga0070673_100157100
295 Ga0070673_100260966
296 Ga0070659_100273586
297 Ga0070667_100008173
298 Ga0070667_100009291
299 Ga0070701_10052647
300 Ga0070700_100124957
301 Ga0070678_100099645
302 Ga0070678_100141280
303 Ga0070678_100182502
304 Ga0070678_100193872
305 Ga0070681_10003717
306 Ga0070685_10004590
307 Ga0070707_100034658
308 Ga0070684_100005277
309 Ga0070684_100026744
310 Ga0068853_100092454
311 Ga0070672_100001965
312 Ga0070672_100009495
313 Ga0070672_100124041
314 Ga0070686_100013051
315 Ga0070686_100014745
316 Ga0070686_100027983
317 Ga0070686_100033813
318 Ga0070665_100002696
319 Ga0070704_100047215
320 Ga0070664_100006750
321 Ga0070664_100018206
322 Ga0070664_100032718
323 Ga0070664_100198712
324 Ga0070664_100354515
325 Ga0068857_100044164
326 Ga0068856_100497510
327 Ga0068859_100000327
328 Ga0068859_100179745
329 Ga0068864_100012267
330 Ga0068863_100001121
331 Ga0068863_100001177
332 Ga0068863_100170312
333 Ga0068858_100039371
334 Ga0068858_100049444
335 Ga0068858_100049766
336 Ga0068858_100110199
337 Ga0068858_100238384
338 Ga0068858_100342493
339 Ga0068860_100003578
340 Ga0068860_100042195
341 Ga0068862_100043287
342 Ga0068862_100093643
343 Ga0068862_100306864
344 Ga0081539_10000028
345 Ga0097621_100059503
346 Ga0097621_100142681
347 Ga0097621_100261751
348 Ga0068871_100009240
349 Ga0068871_100019541
350 Ga0068871_100069874
351 Ga0068871_100277034
352 Ga0075428_100008974
353 Ga0075433_10230581
354 Ga0075434_100013951
355 Ga0075429_100076534
356 Ga0075429_100081202
357 Ga0097620_100000327
358 Ga0097620_100179743
359 Ga0111539_10074243
360 Ga0111539_10104487
361 Ga0111539_10335206
362 Ga0105245_10088175
363 Ga0114129_10015747
364 Ga0105248_10004844
365 Ga0105248_10024499
366 Ga0105248_10033801
367 Ga0105249_10002086
368 Ga0157370_10011333
369 Ga0157374_10051704
370 Ga0157374_10068471
371 Ga0157374_10170175
372 Ga0157378_10019763
373 Ga0157378_10079535
374 Ga0157378_10855301
375 Ga0163162_10006694
376 Ga0163162_10059787
377 Ga0157375_10000538
378 Ga0157375_10010102
379 Ga0157375_10169769
380 Ga0157375_10171899
381 Ga0163163_10027731
382 Ga0163163_10030236
383 Ga0163163_10039253
384 Ga0163163_10056846
385 Ga0163163_10342652
386 Ga0157380_10002835
387 Ga0157379_10001214
388 Ga0157379_10162676
389 Ga0157379_10250309
390 Ga0157376_10177951
391 Ga0206356_10779923
392 Ga0206352_10560181
393 Ga0213876_10151972
394 Ga0213875_10047786
395 Ga0207697_10000897
396 Ga0207688_10019658
397 Ga0207680_10003928
398 Ga0207680_10162549
399 Ga0207645_10133336
400 Ga0207654_10004610
401 Ga0207707_10000239
402 Ga0207695_10001394
403 Ga0207660_10050634
404 Ga0207649_10162894
405 Ga0207652_10014039
406 Ga0207646_10015142
407 Ga0207681_10029014
408 Ga0207694_10001414
409 Ga0207650_10008976
410 Ga0207650_10020408
411 Ga0207659_10006947
412 Ga0207659_10012377
413 Ga0207659_10018087
414 Ga0207659_10027924
415 Ga0207659_10065036
416 Ga0207644_10021063
417 Ga0207690_10087358
418 Ga0207670_10048696
419 Ga0207670_10246375
420 Ga0207691_10001139
421 Ga0207691_10015079
422 Ga0207691_10018215
423 Ga0207691_10143278
424 Ga0207711_10002542
425 Ga0207689_10003398
426 Ga0207679_10003438
427 Ga0207679_10007486
428 Ga0207679_10016128
429 Ga0207679_10093558
430 Ga0207651_10019517
431 Ga0207651_10024105
432 Ga0207712_10015101
433 Ga0207677_10005152
434 Ga0207703_10018139
435 Ga0207703_10158528
436 Ga0207703_10158759
437 Ga0207639_10056040
438 Ga0207708_10165201
439 Ga0207702_10400984
440 Ga0207641_10008397
441 Ga0207641_10029167
442 Ga0207641_10050319
443 Ga0207648_10174536
444 Ga0207676_10007227
445 Ga0207674_10000035
446 Ga0207674_10073216
447 Ga0207675_100423411
448 Ga0207675_100707670
449 Ga0207428_10014656
450 Ga0207428_10025356
451 Ga0268266_10016979
452 Ga0268265_10165645
453 Ga0268264_10028500
454 Ga0307509_10422270
455 Ga0373934_0003143
456 Ga0373934_0077018
457 Ga0373954_0002365
458 Ga0373956_0034921
459 Ga0373957_0062447
460 Ga0373946_0033222
461 Ga0373955_0013995
462 Ga0373933_0091971
463 Ga0373947_0016959
464 Ga0373937_0003402
465 Ga0373937_0005503
466 Ga0373937_0036632
467 Ga0373937_0094577
468 Ga0373937_0619734
469 Ga0373925_0057505
470 Ga0436365_0621413
471 Ga0436362_0572244
472 Ga0451576_0071361
473 Ga0495592_0008675
474 Ga0495592_0063689
475 Ga0495580_0132804
476 Ga0495608_0009118
477 Ga0495608_0178970
478 Ga0495630_0116566
479 Ga0495630_0224415
480 Ga0495586_0067594
481 Ga0495587_0058428
482 Ga0495645_0033642
483 Ga0495659_0069328
484 Ga0495657_0020267
485 Ga0495599_0029072
486 Ga0495599_0113480
487 Ga0495647_0023753
488 Ga0495647_0072718
489 Ga0495669_0053830
490 Ga0495669_0075178
491 Ga0495613_0004151
492 Ga0495613_0059513
493 Ga0495613_0160704
494 Ga0495613_0180151
495 Ga0495600_0155795
496 Ga0495600_0184868
497 Ga0495674_0102604
498 Ga0495674_0170540
499 Ga0495680_0266064
500 Ga0495684_0000708
501 Ga0495684_0029598
502 Ga0495684_0150978
503 Ga0495602_0193935
504 Ga0496104_0095817
505 Ga0501039_0412849
506 nmdc:mga05p37_6356_c1
507 nmdc:mga09592_117009_c1
508 nmdc:mga09592_142933_c1
509 nmdc:mga08y16_103431_c1
510 nmdc:mga08y16_26735_c1
511 nmdc:mga08y16_36322_c1
512 nmdc:mga0n895_16674_c1
513 nmdc:mga0rr50_76052_c1
514 nmdc:mga0a205_62160_c1
515 Ga0495601_0049223
516 Ga0495595_0151317
517 Ga0495619_0001520
518 Ga0495619_0025465
519 Ga0495619_0046342
520 Ga0495619_0087505
521 Ga0500583_0010044
522 Ga0500616_0000019
523 Ga0500616_0013084
524 Ga0500637_0202758

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

85

262

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2znb-assembly1.cif.gz_A metallo-beta-lactamase (cadmium-bound form) 0.785 43 248
5b3r-assembly2.cif.gz_B crystal structure of metallo-beta-lactamase imp-18 from pseudomonas aeruginosa 0.7739 42 246
3sd9-assembly2.cif.gz_B crystal structure of serratia fonticola sfh-i: source of the nucleophile in the catalytic mechanism of mono-zinc metallo-beta-lactamases 0.7739 41 246
5ev6-assembly2.cif.gz_B crystal structure of the native, di-zinc metallo-beta-lactamase imp-1 0.7733 42 246
2bg6-assembly1.cif.gz_A bacillus cereus metallo-beta-lactamase (bcii) arg (121) cys mutant. solved at ph5 using 20 micromolar znso4 in the buffer. 1mm dtt was used as a reducing agent. cys221 is oxidized. 0.7718 44 246
ID Description Score Start End Superfamily
af_A0A1D8PQF7_735_932_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8002 44 73 2.130.10.10
af_G5EEI1_1_268_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.787 44 73 2.130.10.10
af_O07720_1_237_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.78 42 246 3.60.15.10
5ev6B00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7733 42 246 3.60.15.10
af_Q16531_571_1037_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7549 42 68 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A2V8M7D9-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.9251 42 303
AF-A0A3N5UV91-F1-model_v4 MBL fold metallo-hydrolase 0.923 42 298 GO:0016020
GO:0016787
AF-A0A7W1T2X1-F1-model_v4 MBL fold metallo-hydrolase 0.9227 42 158 GO:0016787
GO:0017001
GO:0042597
GO:0046677
GO:0046872
AF-A0A2W4MJU4-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.9222 33 303 GO:0016787
GO:0017001
GO:0042597
GO:0046677
GO:0046872
AF-A0A1Q7Y897-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.9192 42 295 GO:0016787
GO:0017001
GO:0042597
GO:0046677
GO:0046872

Map