F370961

General Info

Members Datasets Scaffolds Average Seq Length
262 164 524 420

Family's Representative Sequence

Representative Sequence 3300005842|Ga0068858_100217022|Ga0068858_1002170222
Length 471
Sequence VYFNLYFCGSIFIVTNKIASRLLYYPPAIFQAIPPDPCPFETQRTKSLMLIGIHKKRIQFFVFSGFTGLLLLALKSNAQQNGPDSLLQSATLQNVIGYTLKHQPAVQQSLIDEKITGLQVKSKLSDWYPQVNFNYLYQRNFQVQTSIIGGNPVKLGVNNTSALQFSATQSIFNRDVLIANRTKNDVRRQAFQQTVNTRIDAIVAVSKAFYDLLATEQQIKVVNENIVRIERSLKDARAQYDAGVVDKTDYKRATIALNNAIATQKANQEALKAKNEYLKALMNYPQTASLDIIYDSTTLEKEIVLDTLQNIDYSKRIEYQLLQTQRKLQEANVLYNKWSYIPSLSANGAYNLNYLNNNFGKLYNQSFPNSYAGLTFSFPIFQGGKRKYDTQQAEWELKRTDLDLVNLRNSVNSEYVYDVIQLQYHSGVKTYLEVVTAETDLRSSQINYFNALYQVLSSKIDVQKSLGEINP

Samples

Sample ID Description Type Environment
1 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
20 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
21 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
22 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
23 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
76 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
77 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
80 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
117 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
118 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
119 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
120 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
121 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
122 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
130 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
131 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
147 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
158 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
161 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
162 2818991444 Filimonas endophytica 3197 Isolate Unclassified
163 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
164 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.47
Metatranscriptomes 0
Isolates 1.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.78
Nodule 0
Rhizoplane 0
Rhizosphere 83.59
Stem 0
Stem Tuber 0
Unclassified 5.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068858_100217022 3300005842 Bacteria 1811
2 JGI24740J21852_10000968 3300001979 Bacteria 12786
3 JGI24740J21852_10003566 3300001979 Bacteria 6812
4 JGI25154J39366_1000007 3300002738 Bacteria 335932
5 JGI25157J39369_1004867 3300002741 Unclassified 2316
6 JGI25153J46596_10001828 3300003215 Bacteria 12620
7 rootH1_10088450 3300003316 Bacteria 3083
8 rootH2_10013162 3300003320 Bacteria 43068
9 rootH2_10041415 3300003320 Bacteria 32372
10 rootH2_10047541 3300003320 Bacteria 3059
11 rootH2_10093007 3300003320 Bacteria 6897
12 rootH2_10158495 3300003320 Bacteria 3460
13 rootH2_10193889 3300003320 Bacteria 2976
14 rootL2_10108336 3300003322 Bacteria 2527
15 rootH1_10084943 3300003323 Bacteria 5571
16 JGI25160J50197_1000563 3300003354 Bacteria 20992
17 JGI25160J50197_1003166 3300003354 Bacteria 7474
18 Ga0055536_1009847 3300003781 Bacteria 3887
19 Ga0055528_1000988 3300003790 Bacteria 18890
20 Ga0055530_10003312 3300003791 Bacteria 9305
21 Ga0065165_1000010 3300005262 Bacteria 323737
22 Ga0065165_1000104 3300005262 Bacteria 140410
23 Ga0070658_10135208 3300005327 Bacteria 2056
24 Ga0070670_100033285 3300005331 Bacteria 4439
25 Ga0070670_100072991 3300005331 Bacteria 2948
26 Ga0070666_10063665 3300005335 Bacteria 2500
27 Ga0070666_10152682 3300005335 Bacteria 1611
28 Ga0070680_100108310 3300005336 Unclassified 2311
29 Ga0070682_100042285 3300005337 Bacteria 2812
30 Ga0068868_100015968 3300005338 Bacteria 5567
31 Ga0068868_100026886 3300005338 Bacteria 4387
32 Ga0070689_100127888 3300005340 Bacteria 2035
33 Ga0070661_100064804 3300005344 Bacteria 2685
34 Ga0070692_10029899 3300005345 Bacteria 2719
35 Ga0070675_100066296 3300005354 Bacteria 2986
36 Ga0070671_100057793 3300005355 Bacteria 3229
37 Ga0070659_100087342 3300005366 Bacteria 2496
38 Ga0070667_100011099 3300005367 Bacteria 7453
39 Ga0070667_100043104 3300005367 Bacteria 3787
40 Ga0070678_100046875 3300005456 Bacteria 3102
41 Ga0070681_10233393 3300005458 Bacteria 1754
42 Ga0068867_100070730 3300005459 Bacteria 2609
43 Ga0070685_10022676 3300005466 Bacteria 3426
44 Ga0070679_100000575 3300005530 Bacteria 31162
45 Ga0070679_100006999 3300005530 Bacteria 10529
46 Ga0070684_100103020 3300005535 Bacteria 2552
47 Ga0068853_100052001 3300005539 Bacteria 3528
48 Ga0068853_100058661 3300005539 Bacteria 3323
49 Ga0068853_100094719 3300005539 Bacteria 2631
50 Ga0068855_100000998 3300005563 Bacteria 35254
51 Ga0068855_100053145 3300005563 Unclassified 4767
52 Ga0068855_100141476 3300005563 Bacteria 2742
53 Ga0068854_100053288 3300005578 Bacteria 2904
54 Ga0068856_100067525 3300005614 Bacteria 3534
55 Ga0068856_100125838 3300005614 Bacteria 2566
56 Ga0068852_100001700 3300005616 Bacteria 14988
57 Ga0068852_100038952 3300005616 Bacteria 3998
58 Ga0068859_100000007 3300005617 Bacteria 390070
59 Ga0068859_100005171 3300005617 Bacteria 13249
60 Ga0068859_100102641 3300005617 Bacteria 2917
61 Ga0068864_100009313 3300005618 Bacteria 8101
62 Ga0068866_10074331 3300005718 Bacteria 1807
63 Ga0068861_100037406 3300005719 Bacteria 3608
64 Ga0068851_10011969 3300005834 Bacteria 4080
65 Ga0068851_10015443 3300005834 Bacteria 3638
66 Ga0068863_100066366 3300005841 Bacteria 3413
67 Ga0068863_100107629 3300005841 Bacteria 2653
68 Ga0068863_100163552 3300005841 Bacteria 2133
69 Ga0068863_100187474 3300005841 Bacteria 1987
70 Ga0068858_100001477 3300005842 Bacteria 24181
71 Ga0068860_100004368 3300005843 Bacteria 14438
72 Ga0068860_100009396 3300005843 Bacteria 9718
73 Ga0068860_100064305 3300005843 Bacteria 3485
74 Ga0068860_100221822 3300005843 Bacteria 1836
75 Ga0068862_100069038 3300005844 Bacteria 3049
76 Ga0081540_1025632 3300005983 Unclassified 3387
77 Ga0075366_10014716 3300006195 Bacteria 4473
78 Ga0075366_10025265 3300006195 Bacteria 3468
79 Ga0075366_10082961 3300006195 Bacteria 1915
80 Ga0097621_100024973 3300006237 Unclassified 4671
81 Ga0097621_100033918 3300006237 Bacteria 4068
82 Ga0097621_100035905 3300006237 Bacteria 3962
83 Ga0068865_100021195 3300006881 Bacteria 4224
84 Ga0097620_100000007 3300006931 Bacteria 390070
85 Ga0097620_100005171 3300006931 Bacteria 13249
86 Ga0097620_100102643 3300006931 Bacteria 2917
87 Ga0111539_10075811 3300009094 Bacteria 3961
88 Ga0105245_10106818 3300009098 Bacteria 2598
89 Ga0105247_10006048 3300009101 Bacteria 7531
90 Ga0105243_10285835 3300009148 Bacteria 1488
91 Ga0105241_10000104 3300009174 Bacteria 60482
92 Ga0105241_10059447 3300009174 Bacteria 2939
93 Ga0105242_10135739 3300009176 Bacteria 2129
94 Ga0105237_10004770 3300009545 Bacteria 15586
95 Ga0105237_10027215 3300009545 Bacteria 5839
96 Ga0105249_10001756 3300009553 Bacteria 18906
97 Ga0105239_10030371 3300010375 Bacteria 5942
98 Ga0105246_10014586 3300011119 Bacteria 4944
99 Ga0157373_10009361 3300013100 Bacteria 7238
100 Ga0157373_10010552 3300013100 Bacteria 6799
101 Ga0157371_10001349 3300013102 Bacteria 25843
102 Ga0157371_10014154 3300013102 Bacteria 6031
103 Ga0157371_10031122 3300013102 Bacteria 3844
104 Ga0157371_10073028 3300013102 Bacteria 2430
105 Ga0157370_10000405 3300013104 Bacteria 54383
106 Ga0157370_10003763 3300013104 Bacteria 17707
107 Ga0157369_10028755 3300013105 Bacteria 6148
108 Ga0157369_10160345 3300013105 Bacteria 2374
109 Ga0157374_10000002 3300013296 Bacteria 1054226
110 Ga0157374_10020668 3300013296 Bacteria 5846
111 Ga0157374_10053657 3300013296 Bacteria 3758
112 Ga0157374_10204489 3300013296 Bacteria 1935
113 Ga0157378_10020396 3300013297 Bacteria 5829
114 Ga0157378_10022937 3300013297 Bacteria 5495
115 Ga0157378_10060109 3300013297 Unclassified 3391
116 Ga0157378_10095917 3300013297 Bacteria 2702
117 Ga0163162_10013418 3300013306 Bacteria 8000
118 Ga0157372_10003141 3300013307 Bacteria 17807
119 Ga0157372_10005956 3300013307 Bacteria 12962
120 Ga0157372_10137763 3300013307 Unclassified 2811
121 Ga0157372_10231326 3300013307 Bacteria 2143
122 Ga0157375_10085053 3300013308 Bacteria 3213
123 Ga0163163_10032641 3300014325 Bacteria 5030
124 Ga0163163_10053334 3300014325 Bacteria 3991
125 Ga0157377_10038939 3300014745 Bacteria 2628
126 Ga0157379_10016474 3300014968 Bacteria 6501
127 Ga0157376_10008645 3300014969 Bacteria 7359
128 Ga0209646_1000002 3300025246 Bacteria 1425781
129 Ga0209026_1001015 3300025250 Bacteria 13857
130 Ga0209673_1000082 3300025273 Bacteria 219716
131 Ga0209676_1000656 3300025292 Bacteria 49578
132 Ga0209758_1003398 3300025297 Bacteria 14538
133 Ga0209758_1005513 3300025297 Bacteria 9676
134 Ga0209050_1000389 3300025298 Bacteria 82517
135 Ga0207426_1000170 3300025302 Bacteria 164216
136 Ga0207426_1000850 3300025302 Bacteria 32126
137 Ga0207426_1001921 3300025302 Bacteria 14980
138 Ga0207656_10030052 3300025321 Bacteria 2242
139 Ga0207710_10006370 3300025900 Bacteria 5044
140 Ga0207680_10000015 3300025903 Bacteria 138253
141 Ga0207645_10001147 3300025907 Bacteria 21883
142 Ga0207705_10032671 3300025909 Bacteria 3720
143 Ga0207654_10001284 3300025911 Bacteria 13370
144 Ga0207707_10280128 3300025912 Bacteria 1444
145 Ga0207671_10113031 3300025914 Unclassified 2068
146 Ga0207657_10011136 3300025919 Bacteria 8939
147 Ga0207657_10039945 3300025919 Bacteria 4162
148 Ga0207652_10000350 3300025921 Bacteria 47780
149 Ga0207650_10074141 3300025925 Bacteria 2565
150 Ga0207650_10188966 3300025925 Bacteria 1645
151 Ga0207644_10180964 3300025931 Bacteria 1652
152 Ga0207706_10025312 3300025933 Bacteria 5319
153 Ga0207704_10135641 3300025938 Unclassified 1712
154 Ga0207665_10113722 3300025939 Bacteria 1905
155 Ga0207691_10001811 3300025940 Bacteria 20910
156 Ga0207689_10004660 3300025942 Bacteria 12400
157 Ga0207689_10007193 3300025942 Bacteria 9775
158 Ga0207689_10009847 3300025942 Bacteria 8238
159 Ga0207667_10060847 3300025949 Bacteria 3952
160 Ga0207667_10096772 3300025949 Bacteria 3047
161 Ga0207651_10199544 3300025960 Bacteria 1602
162 Ga0207712_10000803 3300025961 Bacteria 23144
163 Ga0207668_10026034 3300025972 Bacteria 3794
164 Ga0207668_10081743 3300025972 Bacteria 2345
165 Ga0207658_10032676 3300025986 Bacteria 3706
166 Ga0207677_10027993 3300026023 Bacteria 3558
167 Ga0207677_10045946 3300026023 Bacteria 2920
168 Ga0207677_10131068 3300026023 Bacteria 1903
169 Ga0207639_10158677 3300026041 Bacteria 1904
170 Ga0207678_10012298 3300026067 Bacteria 7515
171 Ga0207702_10098247 3300026078 Unclassified 2579
172 Ga0207641_10000056 3300026088 Bacteria 170719
173 Ga0207641_10162882 3300026088 Bacteria 2029
174 Ga0207641_10176561 3300026088 Unclassified 1953
175 Ga0207648_10008948 3300026089 Bacteria 9631
176 Ga0207648_10014565 3300026089 Bacteria 7263
177 Ga0207676_10009566 3300026095 Bacteria 6902
178 Ga0207674_10082037 3300026116 Bacteria 3226
179 Ga0207675_100020643 3300026118 Bacteria 6140
180 Ga0207675_100021658 3300026118 Bacteria 5983
181 Ga0207683_10000843 3300026121 Bacteria 28112
182 Ga0207698_10003716 3300026142 Bacteria 9228
183 Ga0207698_10012068 3300026142 Bacteria 5634
184 Ga0207698_10112814 3300026142 Bacteria 2282
185 Ga0268264_10001737 3300028381 Bacteria 20026
186 Ga0268264_10003168 3300028381 Bacteria 14249
187 Ga0307515_10000001 3300028794 Bacteria 4259510
188 Ga0307515_10000078 3300028794 Bacteria 227988
189 Ga0265324_10026015 3300029957 Bacteria 2072
190 Ga0316177_1185238 3300030731 Bacteria 2232
191 Ga0265327_10000395 3300031251 Bacteria 81944
192 Ga0307509_10024973 3300031507 Bacteria 6681
193 Ga0307509_10032731 3300031507 Bacteria 5728
194 Ga0373927_0014736 3300035695 Bacteria 5169
195 Ga0395899_0045562 3300037312 Bacteria 3267
196 Ga0395899_0111204 3300037312 Bacteria 1969
197 Ga0395899_0143902 3300037312 Bacteria 1694
198 Ga0395899_0215692 3300037312 Bacteria 1332
199 Ga0395900_0025616 3300037418 Bacteria 6037
200 Ga0395900_0039575 3300037418 Bacteria 4857
201 Ga0395900_0160699 3300037418 Bacteria 2291
202 Ga0395900_0234770 3300037418 Unclassified 1842
203 Ga0395898_0011037 3300037466 Bacteria 9411
204 Ga0395905_0138337 3300037471 Bacteria 2291
205 Ga0395901_0016919 3300038443 Bacteria 7433
206 Ga0395901_0036518 3300038443 Bacteria 5080
207 Ga0439449_0011946 3300042007 Bacteria 3264
208 Ga0466972_0000159 3300044658 Bacteria 54274
209 Ga0466965_0034216 3300044683 Bacteria 2486
210 Ga0466961_0025927 3300044693 Bacteria 3768
211 Ga0466970_0005193 3300044765 Bacteria 6440
212 Ga0495650_0009866 3300046471 Bacteria 5388
213 Ga0495668_0000658 3300046616 Bacteria 41497
214 Ga0495668_0003175 3300046616 Bacteria 12632
215 Ga0495686_0102588 3300047472 Bacteria 1724
216 Ga0501031_0020608 3300049568 Bacteria 4300
217 Ga0501032_0045097 3300049569 Bacteria 2983
218 Ga0501033_0043798 3300049570 Bacteria 3332
219 Ga0501034_0021043 3300049571 Bacteria 6657
220 Ga0501034_0028433 3300049571 Bacteria 5689
221 Ga0501034_0061797 3300049571 Bacteria 3761
222 Ga0501034_0184286 3300049571 Bacteria 2051
223 Ga0501034_0296635 3300049571 Bacteria 1554
224 Ga0501034_0319860 3300049571 Unclassified 1485
225 Ga0501036_0074539 3300049572 Bacteria 2870
226 Ga0501037_0022086 3300049573 Bacteria 4709
227 Ga0501037_0064273 3300049573 Unclassified 2675
228 Ga0501038_0014272 3300049574 Bacteria 7238
229 Ga0501038_0075847 3300049574 Bacteria 2841
230 Ga0501043_0006481 3300049579 Bacteria 9399
231 Ga0501043_0009673 3300049579 Bacteria 7556
232 Ga0501043_0025193 3300049579 Bacteria 4667
233 Ga0501043_0063874 3300049579 Bacteria 2891
234 Ga0501046_0004976 3300049580 Bacteria 11928
235 Ga0501047_0011386 3300049581 Bacteria 8419
236 Ga0501047_0040459 3300049581 Bacteria 4508
237 Ga0501047_0046168 3300049581 Bacteria 4210
238 Ga0501048_0015237 3300049582 Bacteria 5679
239 Ga0501067_0020660 3300049583 Bacteria 3644
240 Ga0501068_0010790 3300049584 Bacteria 5139
241 Ga0501073_0054558 3300049589 Bacteria 2797
242 Ga0501074_0011895 3300049590 Bacteria 6328
243 Ga0501219_000449 3300049703 Bacteria 6597
244 Ga0501083_0007795 3300049744 Bacteria 7585
245 Ga0501035_0019124 3300049822 Bacteria 6305
246 Ga0501035_0226972 3300049822 Bacteria 1593
247 Ga0501044_0018683 3300049823 Bacteria 7425
248 Ga0501044_0049671 3300049823 Bacteria 4330
249 Ga0501044_0088254 3300049823 Bacteria 3131
250 Ga0501044_0093130 3300049823 Bacteria 3038
251 Ga0501044_0149994 3300049823 Bacteria 2314
252 Ga0501284_00014 3300050005 Bacteria 114419
253 nmdc:mga0k408_20996_c1 3300050493 Bacteria 3665
254 nmdc:mga08y16_60151_c1 3300050511 Bacteria 3968
255 Ga0500641_0013144 3300053096 Bacteria 3039
256 Ga0500652_055857 3300053131 Bacteria 1618
257 Ga0500568_0001732 3300053139 Bacteria 13529
258 Ga0501084_0078087 3300054114 Bacteria 2775
259 2522551934 2522125168 Bacteria 7376607
260 2819587458 2818991444 Bacteria 6968812
261 2929923400 2929921140 Bacteria 8649150
262 8003152802 8003151029 Bacteria 8187759
263 Ga0068858_100217022
264 JGI24740J21852_10000968
265 JGI24740J21852_10003566
266 JGI25154J39366_1000007
267 JGI25157J39369_1004867
268 JGI25153J46596_10001828
269 rootH1_10088450
270 rootH2_10013162
271 rootH2_10041415
272 rootH2_10047541
273 rootH2_10093007
274 rootH2_10158495
275 rootH2_10193889
276 rootL2_10108336
277 rootH1_10084943
278 JGI25160J50197_1000563
279 JGI25160J50197_1003166
280 Ga0055536_1009847
281 Ga0055528_1000988
282 Ga0055530_10003312
283 Ga0065165_1000010
284 Ga0065165_1000104
285 Ga0070658_10135208
286 Ga0070670_100033285
287 Ga0070670_100072991
288 Ga0070666_10063665
289 Ga0070666_10152682
290 Ga0070680_100108310
291 Ga0070682_100042285
292 Ga0068868_100015968
293 Ga0068868_100026886
294 Ga0070689_100127888
295 Ga0070661_100064804
296 Ga0070692_10029899
297 Ga0070675_100066296
298 Ga0070671_100057793
299 Ga0070659_100087342
300 Ga0070667_100011099
301 Ga0070667_100043104
302 Ga0070678_100046875
303 Ga0070681_10233393
304 Ga0068867_100070730
305 Ga0070685_10022676
306 Ga0070679_100000575
307 Ga0070679_100006999
308 Ga0070684_100103020
309 Ga0068853_100052001
310 Ga0068853_100058661
311 Ga0068853_100094719
312 Ga0068855_100000998
313 Ga0068855_100053145
314 Ga0068855_100141476
315 Ga0068854_100053288
316 Ga0068856_100067525
317 Ga0068856_100125838
318 Ga0068852_100001700
319 Ga0068852_100038952
320 Ga0068859_100000007
321 Ga0068859_100005171
322 Ga0068859_100102641
323 Ga0068864_100009313
324 Ga0068866_10074331
325 Ga0068861_100037406
326 Ga0068851_10011969
327 Ga0068851_10015443
328 Ga0068863_100066366
329 Ga0068863_100107629
330 Ga0068863_100163552
331 Ga0068863_100187474
332 Ga0068858_100001477
333 Ga0068860_100004368
334 Ga0068860_100009396
335 Ga0068860_100064305
336 Ga0068860_100221822
337 Ga0068862_100069038
338 Ga0081540_1025632
339 Ga0075366_10014716
340 Ga0075366_10025265
341 Ga0075366_10082961
342 Ga0097621_100024973
343 Ga0097621_100033918
344 Ga0097621_100035905
345 Ga0068865_100021195
346 Ga0097620_100000007
347 Ga0097620_100005171
348 Ga0097620_100102643
349 Ga0111539_10075811
350 Ga0105245_10106818
351 Ga0105247_10006048
352 Ga0105243_10285835
353 Ga0105241_10000104
354 Ga0105241_10059447
355 Ga0105242_10135739
356 Ga0105237_10004770
357 Ga0105237_10027215
358 Ga0105249_10001756
359 Ga0105239_10030371
360 Ga0105246_10014586
361 Ga0157373_10009361
362 Ga0157373_10010552
363 Ga0157371_10001349
364 Ga0157371_10014154
365 Ga0157371_10031122
366 Ga0157371_10073028
367 Ga0157370_10000405
368 Ga0157370_10003763
369 Ga0157369_10028755
370 Ga0157369_10160345
371 Ga0157374_10000002
372 Ga0157374_10020668
373 Ga0157374_10053657
374 Ga0157374_10204489
375 Ga0157378_10020396
376 Ga0157378_10022937
377 Ga0157378_10060109
378 Ga0157378_10095917
379 Ga0163162_10013418
380 Ga0157372_10003141
381 Ga0157372_10005956
382 Ga0157372_10137763
383 Ga0157372_10231326
384 Ga0157375_10085053
385 Ga0163163_10032641
386 Ga0163163_10053334
387 Ga0157377_10038939
388 Ga0157379_10016474
389 Ga0157376_10008645
390 Ga0209646_1000002
391 Ga0209026_1001015
392 Ga0209673_1000082
393 Ga0209676_1000656
394 Ga0209758_1003398
395 Ga0209758_1005513
396 Ga0209050_1000389
397 Ga0207426_1000170
398 Ga0207426_1000850
399 Ga0207426_1001921
400 Ga0207656_10030052
401 Ga0207710_10006370
402 Ga0207680_10000015
403 Ga0207645_10001147
404 Ga0207705_10032671
405 Ga0207654_10001284
406 Ga0207707_10280128
407 Ga0207671_10113031
408 Ga0207657_10011136
409 Ga0207657_10039945
410 Ga0207652_10000350
411 Ga0207650_10074141
412 Ga0207650_10188966
413 Ga0207644_10180964
414 Ga0207706_10025312
415 Ga0207704_10135641
416 Ga0207665_10113722
417 Ga0207691_10001811
418 Ga0207689_10004660
419 Ga0207689_10007193
420 Ga0207689_10009847
421 Ga0207667_10060847
422 Ga0207667_10096772
423 Ga0207651_10199544
424 Ga0207712_10000803
425 Ga0207668_10026034
426 Ga0207668_10081743
427 Ga0207658_10032676
428 Ga0207677_10027993
429 Ga0207677_10045946
430 Ga0207677_10131068
431 Ga0207639_10158677
432 Ga0207678_10012298
433 Ga0207702_10098247
434 Ga0207641_10000056
435 Ga0207641_10162882
436 Ga0207641_10176561
437 Ga0207648_10008948
438 Ga0207648_10014565
439 Ga0207676_10009566
440 Ga0207674_10082037
441 Ga0207675_100020643
442 Ga0207675_100021658
443 Ga0207683_10000843
444 Ga0207698_10003716
445 Ga0207698_10012068
446 Ga0207698_10112814
447 Ga0268264_10001737
448 Ga0268264_10003168
449 Ga0307515_10000001
450 Ga0307515_10000078
451 Ga0265324_10026015
452 Ga0316177_1185238
453 Ga0265327_10000395
454 Ga0307509_10024973
455 Ga0307509_10032731
456 Ga0373927_0014736
457 Ga0395899_0045562
458 Ga0395899_0111204
459 Ga0395899_0143902
460 Ga0395899_0215692
461 Ga0395900_0025616
462 Ga0395900_0039575
463 Ga0395900_0160699
464 Ga0395900_0234770
465 Ga0395898_0011037
466 Ga0395905_0138337
467 Ga0395901_0016919
468 Ga0395901_0036518
469 Ga0439449_0011946
470 Ga0466972_0000159
471 Ga0466965_0034216
472 Ga0466961_0025927
473 Ga0466970_0005193
474 Ga0495650_0009866
475 Ga0495668_0000658
476 Ga0495668_0003175
477 Ga0495686_0102588
478 Ga0501031_0020608
479 Ga0501032_0045097
480 Ga0501033_0043798
481 Ga0501034_0021043
482 Ga0501034_0028433
483 Ga0501034_0061797
484 Ga0501034_0184286
485 Ga0501034_0296635
486 Ga0501034_0319860
487 Ga0501036_0074539
488 Ga0501037_0022086
489 Ga0501037_0064273
490 Ga0501038_0014272
491 Ga0501038_0075847
492 Ga0501043_0006481
493 Ga0501043_0009673
494 Ga0501043_0025193
495 Ga0501043_0063874
496 Ga0501046_0004976
497 Ga0501047_0011386
498 Ga0501047_0040459
499 Ga0501047_0046168
500 Ga0501048_0015237
501 Ga0501067_0020660
502 Ga0501068_0010790
503 Ga0501073_0054558
504 Ga0501074_0011895
505 Ga0501219_000449
506 Ga0501083_0007795
507 Ga0501035_0019124
508 Ga0501035_0226972
509 Ga0501044_0018683
510 Ga0501044_0049671
511 Ga0501044_0088254
512 Ga0501044_0093130
513 Ga0501044_0149994
514 Ga0501284_00014
515 nmdc:mga0k408_20996_c1
516 nmdc:mga08y16_60151_c1
517 Ga0500641_0013144
518 Ga0500652_055857
519 Ga0500568_0001732
520 Ga0501084_0078087
521 2522551934
522 2819587458
523 2929923400
524 8003152802

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02321

OEP

Outer membrane efflux protein

305

417

0.9

PF02321

OEP

Outer membrane efflux protein

92

286

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2xmn-assembly1.cif.gz_A high resolution snapshots of defined tolc open states present an iris- like movement of periplasmic entrance helices 0.7842 33 441
1wp1-assembly1.cif.gz_A crystal structure of the drug-discharge outer membrane protein, oprm 0.7813 35 436
7ng9-assembly1.cif.gz_A trimeric efflux pump klebsiella tolc 0.7783 33 441
6zre-assembly2.cif.gz_B deciphering the role of the channel constrictions in the opening mechanism of mexab-oprm efflux pump from pseudomonas aeruginosa 0.7776 35 435
1wp1-assembly2.cif.gz_B crystal structure of the drug-discharge outer membrane protein, oprm 0.7776 35 436
ID Description Score Start End Superfamily
af_P75830_95_182_6.10.140.1990 Special;Helix non-globular;Helix Hairpins; 0.9225 143 224 6.10.140.1990
1vf7J03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.92 158 214 1.10.287.470
1vf7G03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9147 158 214 1.10.287.470
1t5eI03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.913 158 214 1.10.287.470
2v4dA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9128 158 214 1.10.287.470
ID Description Score Start End GO Terms
AF-A0A160TKN8-F1-model_v4 RND efflux system, outer membrane lipoprotein CmeC 0.8855 329 437 GO:0015562
AF-A0A3R9NJG5-F1-model_v4 TolC family protein 0.8791 4 440 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A2H5X7U6-F1-model_v4 Cobalt-zinc-cadmium resistance protein CzcC 0.8688 18 437 GO:0015562
AF-A0A3R9NJG5-F1-model_v4 TolC family protein 0.8678 4 440 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A1I1YA08-F1-model_v4 Outer membrane protein TolC 0.8573 18 438 GO:0009279
GO:0015288
GO:0015562
GO:1990281

Map