F369684

General Info

Members Datasets Scaffolds Average Seq Length
260 212 520 600

Family's Representative Sequence

Representative Sequence 3300035086|Ga0373934_0007802|Ga0373934_0007802_1484_3331
Length 615
Sequence MSMTAPTDAPIEMQPAAGKAALRVVPKPPIASVDDGEGRDSYAVTAVADIIDRSLHATIARLTFGLSPAALSKAYFDWATHLAVSPGKRLQLIDKATRKAIRFANYAFHAAAEGGKTSCCIEPLPQDRRFEGADWQKSPYNLMYQAFLLQQQWWHNATTGVRGVSKQHEDMVEFVSRQLLDMVSPSNFLMTNPEVLRRTVSKGGMNLVAGWRNFVEDWERSISGKKPVGTEDFEVGRDVAVTPGKVVYRNRLIELIQYAPATGKVRPEPVLIVPAWIMKYYILDLTPHNSLVKYLTEQGYTVFMVSWKNPSPDDRDLSLDDYRRLGVMAALDAVGKIVLERKVHAVGYCLGGTLLSIAASAMARDGDDRLQSVTLLAAQTDFTEAGELMLFINESQVAFLEDMMWEQGFLDATQMAGAFQMLHSSDLISSRMVHDYLMGERSPMIDLMAWNADATRMPYRMHSEYLRQLFLNNDLAEGRYLVDEKPIALTDMRAPIFAVGTVQDHVAPWRSTYKINFLTDAYVTYLLASGGHNAGIVSEPGHDRRGFQVLTRKADERYVDPETFLAQAPRHDGSWWPEWSAWLAARSGEPVDPPEMGGPDRVALAEAPGSYVLQQ

Samples

Sample ID Description Type Environment
1 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
53 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
80 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
81 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
85 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
86 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
87 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
93 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
94 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
96 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
97 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
100 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
101 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
108 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
113 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
121 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
122 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
125 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
126 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
132 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
133 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
134 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
153 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
161 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
162 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
163 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
166 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
167 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
168 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
169 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
170 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
171 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
172 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
173 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
174 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
175 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
176 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
177 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
178 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
179 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
182 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
183 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
184 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
185 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
186 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
187 2791355199
188 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
189 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
190 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
191 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
192 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
193 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
194 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
195 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
196 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
197 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
198 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
199 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
200 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
201 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
202 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
203 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
204 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
205 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
206 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
207 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
208 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
209 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
210 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
211 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
212 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.42
Metatranscriptomes 0
Isolates 11.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.08
Nodule 6.54
Rhizoplane 1.15
Rhizosphere 66.54
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373934_0007802 3300035086 Bacteria 3979
2 JGI25153J46596_10000876 3300003215 Bacteria 18310
3 Ga0070676_10013820 3300005328 Bacteria 4428
4 Ga0070670_100034154 3300005331 Bacteria 4378
5 Ga0070677_10005230 3300005333 Bacteria 4270
6 Ga0068868_100056443 3300005338 Bacteria 3101
7 Ga0070668_100038510 3300005347 Bacteria 3654
8 Ga0070669_100001769 3300005353 Bacteria 15555
9 Ga0070669_100040700 3300005353 Bacteria 3378
10 Ga0070675_100051518 3300005354 Bacteria 3383
11 Ga0070674_100012676 3300005356 Bacteria 5183
12 Ga0070667_100024358 3300005367 Bacteria 5027
13 Ga0070700_100011628 3300005441 Bacteria 4881
14 Ga0070663_100077957 3300005455 Bacteria 2427
15 Ga0070678_100025136 3300005456 Bacteria 4001
16 Ga0070662_100008532 3300005457 Bacteria 6682
17 Ga0068867_100010689 3300005459 Bacteria 6474
18 Ga0068853_100040726 3300005539 Bacteria 3965
19 Ga0070672_100003273 3300005543 Bacteria 10486
20 Ga0070672_100036253 3300005543 Bacteria 3757
21 Ga0070665_100010997 3300005548 Bacteria 9149
22 Ga0068852_100023095 3300005616 Bacteria 5000
23 Ga0068859_100018900 3300005617 Bacteria 6922
24 Ga0068864_100127627 3300005618 Bacteria 2281
25 Ga0068861_100047023 3300005719 Bacteria 3256
26 Ga0068863_100006952 3300005841 Bacteria 11096
27 Ga0068858_100004759 3300005842 Bacteria 13290
28 Ga0068858_100008404 3300005842 Bacteria 9930
29 Ga0068860_100000302 3300005843 Bacteria 68581
30 Ga0068862_100094022 3300005844 Bacteria 2614
31 Ga0081455_10001783 3300005937 Bacteria 26011
32 Ga0081455_10008713 3300005937 Bacteria 10505
33 Ga0081540_1000629 3300005983 Bacteria 33549
34 Ga0081540_1001092 3300005983 Bacteria 24059
35 Ga0070717_10066322 3300006028 Bacteria 3002
36 Ga0075365_10048245 3300006038 Bacteria 2802
37 Ga0075363_100004405 3300006048 Bacteria 6151
38 Ga0075364_10028354 3300006051 Bacteria 3584
39 Ga0075362_10000294 3300006177 Bacteria 14124
40 Ga0075367_10010525 3300006178 Bacteria 4861
41 Ga0075369_10003848 3300006186 Bacteria 5504
42 Ga0075369_10020831 3300006186 Bacteria 2688
43 Ga0075370_10014362 3300006353 Bacteria 4222
44 Ga0068865_100114559 3300006881 Bacteria 1994
45 Ga0097620_100018901 3300006931 Bacteria 6922
46 Ga0105245_10051810 3300009098 Bacteria 3680
47 Ga0105247_10007134 3300009101 Bacteria 6861
48 Ga0114129_10041749 3300009147 Bacteria 6460
49 Ga0105243_10032784 3300009148 Bacteria 4016
50 Ga0105248_10047823 3300009177 Bacteria 4797
51 Ga0105237_10043260 3300009545 Bacteria 4538
52 Ga0157378_10001958 3300013297 Bacteria 18458
53 Ga0163162_10057524 3300013306 Bacteria 3917
54 Ga0163162_10065118 3300013306 Bacteria 3691
55 Ga0157375_10008244 3300013308 Bacteria 9120
56 Ga0157375_10171531 3300013308 Bacteria 2317
57 Ga0157380_10003716 3300014326 Bacteria 10492
58 Ga0157380_10011511 3300014326 Bacteria 6393
59 Ga0157379_10031835 3300014968 Bacteria 4699
60 Ga0163161_10004910 3300017792 Bacteria 9307
61 Ga0209758_1012176 3300025297 Bacteria 4852
62 Ga0207682_10000553 3300025893 Bacteria 17226
63 Ga0207681_10001571 3300025923 Bacteria 14683
64 Ga0207650_10020546 3300025925 Bacteria 4658
65 Ga0207644_10043482 3300025931 Bacteria 3188
66 Ga0207706_10008874 3300025933 Bacteria 9254
67 Ga0207669_10001705 3300025937 Bacteria 9338
68 Ga0207691_10008036 3300025940 Bacteria 10140
69 Ga0207691_10027645 3300025940 Bacteria 5317
70 Ga0207691_10061599 3300025940 Bacteria 3408
71 Ga0207711_10017263 3300025941 Bacteria 5998
72 Ga0207711_10068173 3300025941 Bacteria 3081
73 Ga0207689_10001309 3300025942 Bacteria 24002
74 Ga0207689_10032757 3300025942 Bacteria 4320
75 Ga0207651_10012682 3300025960 Bacteria 4783
76 Ga0207651_10055271 3300025960 Bacteria 2726
77 Ga0207712_10032627 3300025961 Bacteria 3515
78 Ga0207668_10003039 3300025972 Bacteria 9839
79 Ga0207668_10124063 3300025972 Bacteria 1960
80 Ga0207658_10005659 3300025986 Bacteria 8554
81 Ga0207703_10048825 3300026035 Bacteria 3418
82 Ga0207703_10072543 3300026035 Bacteria 2846
83 Ga0207678_10011059 3300026067 Bacteria 7928
84 Ga0207678_10037970 3300026067 Bacteria 4187
85 Ga0207678_10066868 3300026067 Bacteria 3085
86 Ga0207708_10100339 3300026075 Bacteria 2240
87 Ga0207648_10005331 3300026089 Bacteria 12960
88 Ga0207648_10007343 3300026089 Bacteria 10852
89 Ga0207675_100006466 3300026118 Bacteria 11096
90 Ga0207675_100049628 3300026118 Bacteria 3916
91 Ga0207683_10001533 3300026121 Bacteria 20807
92 Ga0207698_10023199 3300026142 Bacteria 4330
93 Ga0209588_1003572 3300027671 Bacteria 4319
94 Ga0268266_10031570 3300028379 Bacteria 4499
95 Ga0268266_10077701 3300028379 Bacteria 2886
96 Ga0268265_10096248 3300028380 Bacteria 2379
97 Ga0268264_10000020 3300028381 Bacteria 483593
98 Ga0268264_10005124 3300028381 Bacteria 11106
99 Ga0265337_1000182 3300028556 Bacteria 33103
100 Ga0265338_10068325 3300028800 Bacteria 3062
101 Ga0307511_10029144 3300030521 Bacteria 4992
102 Ga0265328_10000608 3300031239 Bacteria 16653
103 Ga0265325_10018504 3300031241 Bacteria 3864
104 Ga0265339_10004666 3300031249 Bacteria 9307
105 Ga0265331_10000125 3300031250 Bacteria 101037
106 Ga0307509_10001185 3300031507 Bacteria 44376
107 Ga0307508_10000041 3300031616 Bacteria 147868
108 Ga0307514_10009253 3300031649 Bacteria 8304
109 Ga0316575_10008641 3300031665 Bacteria 3713
110 Ga0265314_10057641 3300031711 Bacteria 2666
111 Ga0307516_10004048 3300031730 Bacteria 18366
112 Ga0307516_10013075 3300031730 Bacteria 8876
113 Ga0307516_10053270 3300031730 Bacteria 3957
114 Ga0307516_10073892 3300031730 Bacteria 3266
115 Ga0307409_100065867 3300031995 Bacteria 2853
116 Ga0307416_100002908 3300032002 Bacteria 9984
117 Ga0307507_10018320 3300033179 Bacteria 7971
118 Ga0307507_10092276 3300033179 Bacteria 2586
119 Ga0307510_10000881 3300033180 Bacteria 31584
120 Ga0307510_10006778 3300033180 Bacteria 13657
121 Ga0373934_0022135 3300035086 Bacteria 2451
122 Ga0373923_0022791 3300035111 Bacteria 2459
123 Ga0373954_0000759 3300035118 Bacteria 12441
124 Ga0373956_0009843 3300035119 Bacteria 3894
125 Ga0373924_0010478 3300035410 Bacteria 3419
126 Ga0373931_0004550 3300035691 Bacteria 6343
127 Ga0373927_0028607 3300035695 Bacteria 3635
128 Ga0373927_0071419 3300035695 Bacteria 2247
129 Ga0373933_0016258 3300035724 Bacteria 4158
130 Ga0373947_0027826 3300035725 Bacteria 3311
131 Ga0373937_0007927 3300036401 Bacteria 9206
132 Ga0373937_0056570 3300036401 Bacteria 3602
133 Ga0373937_0071974 3300036401 Bacteria 3188
134 Ga0373937_0092149 3300036401 Bacteria 2809
135 Ga0373925_0009379 3300037068 Bacteria 7126
136 Ga0373925_0037602 3300037068 Bacteria 3574
137 Ga0436365_1078403 3300039437 Bacteria 2350
138 Ga0439465_0025862 3300041413 Bacteria 1854
139 Ga0466972_0042222 3300044658 Bacteria 2218
140 Ga0495603_0001564 3300046455 Bacteria 13383
141 Ga0495629_0009305 3300046459 Bacteria 7190
142 Ga0495629_0032926 3300046459 Bacteria 3668
143 Ga0495629_0062494 3300046459 Bacteria 2601
144 Ga0495638_0029361 3300046460 Bacteria 3545
145 Ga0495651_0001640 3300046462 Bacteria 17337
146 Ga0495651_0036893 3300046462 Bacteria 3806
147 Ga0495653_0005830 3300046463 Bacteria 10084
148 Ga0495582_0022048 3300046473 Bacteria 3484
149 Ga0495582_0031683 3300046473 Bacteria 2907
150 Ga0495639_0024333 3300046475 Bacteria 2665
151 Ga0495628_0054153 3300046516 Bacteria 3164
152 Ga0495632_0025815 3300046519 Bacteria 3103
153 Ga0495652_0015113 3300046529 Bacteria 6915
154 Ga0495665_0005790 3300046531 Bacteria 6669
155 Ga0495645_0045215 3300046543 Bacteria 3212
156 Ga0495667_0006684 3300046559 Bacteria 7827
157 Ga0495656_0001559 3300046615 Bacteria 7495
158 Ga0495668_0011483 3300046616 Bacteria 5302
159 Ga0495634_0002523 3300046642 Bacteria 15172
160 Ga0495634_0010633 3300046642 Bacteria 6736
161 Ga0495625_0000158 3300046660 Bacteria 104399
162 Ga0495635_0027157 3300046663 Bacteria 3983
163 Ga0495613_0078382 3300046689 Bacteria 2404
164 Ga0495624_0002520 3300046690 Bacteria 13853
165 Ga0495600_0015547 3300046809 Bacteria 4814
166 Ga0495604_0000969 3300047317 Bacteria 23926
167 Ga0495674_0092447 3300047319 Bacteria 2582
168 Ga0495676_0106130 3300047321 Bacteria 2070
169 Ga0495680_0010982 3300047322 Bacteria 8049
170 Ga0495675_0025503 3300047444 Bacteria 3769
171 Ga0495675_0028596 3300047444 Bacteria 3554
172 Ga0495684_0032011 3300047471 Bacteria 4037
173 Ga0495602_0068639 3300048088 Bacteria 3043
174 Ga0496102_0124414 3300048905 Bacteria 2410
175 Ga0496104_0007456 3300048907 Bacteria 9667
176 Ga0496104_0030260 3300048907 Bacteria 5030
177 Ga0496121_0001451 3300048924 Bacteria 40023
178 Ga0496121_0030924 3300048924 Bacteria 4907
179 Ga0496123_0000400 3300048926 Bacteria 80571
180 Ga0496125_0000744 3300048928 Bacteria 53740
181 Ga0496125_0006206 3300048928 Bacteria 13017
182 Ga0496126_0027616 3300048929 Bacteria 5417
183 Ga0501032_0008540 3300049569 Bacteria 7470
184 Ga0501034_0000108 3300049571 Bacteria 152258
185 Ga0501036_0019757 3300049572 Bacteria 5656
186 Ga0501037_0000713 3300049573 Bacteria 25222
187 Ga0501039_0004020 3300049575 Bacteria 11049
188 Ga0501046_0000488 3300049580 Bacteria 39620
189 Ga0501046_0052957 3300049580 Bacteria 3197
190 Ga0501047_0000564 3300049581 Bacteria 39704
191 Ga0501048_0013815 3300049582 Bacteria 5989
192 Ga0501068_0084405 3300049584 Bacteria 1953
193 Ga0501070_0005913 3300049586 Bacteria 10433
194 Ga0501074_0032798 3300049590 Bacteria 3762
195 Ga0501198_000009 3300049649 Bacteria 122302
196 Ga0501222_000001 3300049662 Bacteria 307689
197 Ga0501035_0001446 3300049822 Bacteria 24334
198 Ga0501045_0001517 3300049824 Bacteria 15443
199 nmdc:mga03n38_23113_c1 3300050490 Bacteria 2525
200 nmdc:mga00v17_41188_c1 3300050491 Bacteria 2773
201 nmdc:mga0k408_61473_c1 3300050493 Bacteria 2184
202 nmdc:mga06z11_13738_c1 3300050494 Bacteria 3566
203 nmdc:mga0sz30_8618_c2 3300050516 Bacteria 3528
204 Ga0495601_0009155 3300053077 Bacteria 5848
205 Ga0495601_0017916 3300053077 Bacteria 4305
206 Ga0495612_0011964 3300053078 Bacteria 3498
207 Ga0495595_0009045 3300053084 Bacteria 4113
208 Ga0495619_0003420 3300053085 Bacteria 10245
209 Ga0495619_0029862 3300053085 Bacteria 3525
210 Ga0500566_0000400 3300053094 Bacteria 24130
211 Ga0500556_0012394 3300053104 Bacteria 2547
212 Ga0500572_000121 3300053111 Bacteria 26132
213 Ga0500595_000181 3300053119 Bacteria 42687
214 Ga0500595_000799 3300053119 Bacteria 18242
215 Ga0500595_015149 3300053119 Bacteria 2899
216 Ga0500608_006627 3300053122 Bacteria 4731
217 Ga0500559_0004099 3300053136 Bacteria 6989
218 Ga0500564_041539 3300053138 Bacteria 2116
219 Ga0500573_0014722 3300053140 Bacteria 4428
220 Ga0500589_042283 3300053147 Bacteria 2125
221 Ga0500590_047065 3300053148 Bacteria 2203
222 Ga0500603_000217 3300053150 Bacteria 15197
223 Ga0500630_013817 3300053159 Bacteria 3975
224 Ga0500639_000219 3300053163 Bacteria 28391
225 Ga0500637_0000116 3300053178 Bacteria 29193
226 Ga0500596_000294 3300053735 Bacteria 8836
227 Ga0500596_004419 3300053735 Bacteria 2577
228 Ga0501084_0029003 3300054114 Bacteria 4627
229 Ga0500661_001884 3300055283 Bacteria 3962
230 2513691553 2513237101 Bacteria 7952346
231 2513877747 2513237139 Bacteria 8737671
232 2514015062 2513237161 Bacteria 8871253
233 2617350008 2617270735 Bacteria 9163226
234 2723845462 2721755755 Bacteria 8322773
235 2793083351
236 2805917125 2802429603 Bacteria 8777136
237 2824630811 2824626560 Bacteria 8813858
238 2824637442 2824635225 Bacteria 8785348
239 2824646309 2824644064 Bacteria 8743947
240 2824675873 2824671348 Bacteria 8369588
241 2824691995 2824687955 Bacteria 8360029
242 2824696597 2824696289 Bacteria 8335049
243 2824717473 2824714736 Bacteria 8717648
244 2824726731 2824723954 Bacteria 8758240
245 2824776752 2824773399 Bacteria 8360218
246 2838125409 2838122688 Bacteria 8803140
247 2841941931 2841941048 Bacteria 8688029
248 2841951365 2841949485 Bacteria 8680857
249 2841968636 2841966195 Bacteria 8673214
250 2841976163 2841974524 Bacteria 8931498
251 2841987528 2841983080 Bacteria 8395090
252 2847944700 2847939898 Bacteria 8606328
253 2849081073 2849076700 Bacteria 7039503
254 2874612453 2874604998 Bacteria 7834745
255 2889038897 2889033259 Bacteria 9099371
256 2920762388 2920760137 Bacteria 7427611
257 8006943675 8006933436 Bacteria 10410654
258 8006983926 8006973647 Bacteria 10679141
259 8019542236 8019538911 Bacteria 7872763
260 8056674204 8056673599 Bacteria 7871253
261 Ga0373934_0007802
262 JGI25153J46596_10000876
263 Ga0070676_10013820
264 Ga0070670_100034154
265 Ga0070677_10005230
266 Ga0068868_100056443
267 Ga0070668_100038510
268 Ga0070669_100001769
269 Ga0070669_100040700
270 Ga0070675_100051518
271 Ga0070674_100012676
272 Ga0070667_100024358
273 Ga0070700_100011628
274 Ga0070663_100077957
275 Ga0070678_100025136
276 Ga0070662_100008532
277 Ga0068867_100010689
278 Ga0068853_100040726
279 Ga0070672_100003273
280 Ga0070672_100036253
281 Ga0070665_100010997
282 Ga0068852_100023095
283 Ga0068859_100018900
284 Ga0068864_100127627
285 Ga0068861_100047023
286 Ga0068863_100006952
287 Ga0068858_100004759
288 Ga0068858_100008404
289 Ga0068860_100000302
290 Ga0068862_100094022
291 Ga0081455_10001783
292 Ga0081455_10008713
293 Ga0081540_1000629
294 Ga0081540_1001092
295 Ga0070717_10066322
296 Ga0075365_10048245
297 Ga0075363_100004405
298 Ga0075364_10028354
299 Ga0075362_10000294
300 Ga0075367_10010525
301 Ga0075369_10003848
302 Ga0075369_10020831
303 Ga0075370_10014362
304 Ga0068865_100114559
305 Ga0097620_100018901
306 Ga0105245_10051810
307 Ga0105247_10007134
308 Ga0114129_10041749
309 Ga0105243_10032784
310 Ga0105248_10047823
311 Ga0105237_10043260
312 Ga0157378_10001958
313 Ga0163162_10057524
314 Ga0163162_10065118
315 Ga0157375_10008244
316 Ga0157375_10171531
317 Ga0157380_10003716
318 Ga0157380_10011511
319 Ga0157379_10031835
320 Ga0163161_10004910
321 Ga0209758_1012176
322 Ga0207682_10000553
323 Ga0207681_10001571
324 Ga0207650_10020546
325 Ga0207644_10043482
326 Ga0207706_10008874
327 Ga0207669_10001705
328 Ga0207691_10008036
329 Ga0207691_10027645
330 Ga0207691_10061599
331 Ga0207711_10017263
332 Ga0207711_10068173
333 Ga0207689_10001309
334 Ga0207689_10032757
335 Ga0207651_10012682
336 Ga0207651_10055271
337 Ga0207712_10032627
338 Ga0207668_10003039
339 Ga0207668_10124063
340 Ga0207658_10005659
341 Ga0207703_10048825
342 Ga0207703_10072543
343 Ga0207678_10011059
344 Ga0207678_10037970
345 Ga0207678_10066868
346 Ga0207708_10100339
347 Ga0207648_10005331
348 Ga0207648_10007343
349 Ga0207675_100006466
350 Ga0207675_100049628
351 Ga0207683_10001533
352 Ga0207698_10023199
353 Ga0209588_1003572
354 Ga0268266_10031570
355 Ga0268266_10077701
356 Ga0268265_10096248
357 Ga0268264_10000020
358 Ga0268264_10005124
359 Ga0265337_1000182
360 Ga0265338_10068325
361 Ga0307511_10029144
362 Ga0265328_10000608
363 Ga0265325_10018504
364 Ga0265339_10004666
365 Ga0265331_10000125
366 Ga0307509_10001185
367 Ga0307508_10000041
368 Ga0307514_10009253
369 Ga0316575_10008641
370 Ga0265314_10057641
371 Ga0307516_10004048
372 Ga0307516_10013075
373 Ga0307516_10053270
374 Ga0307516_10073892
375 Ga0307409_100065867
376 Ga0307416_100002908
377 Ga0307507_10018320
378 Ga0307507_10092276
379 Ga0307510_10000881
380 Ga0307510_10006778
381 Ga0373934_0022135
382 Ga0373923_0022791
383 Ga0373954_0000759
384 Ga0373956_0009843
385 Ga0373924_0010478
386 Ga0373931_0004550
387 Ga0373927_0028607
388 Ga0373927_0071419
389 Ga0373933_0016258
390 Ga0373947_0027826
391 Ga0373937_0007927
392 Ga0373937_0056570
393 Ga0373937_0071974
394 Ga0373937_0092149
395 Ga0373925_0009379
396 Ga0373925_0037602
397 Ga0436365_1078403
398 Ga0439465_0025862
399 Ga0466972_0042222
400 Ga0495603_0001564
401 Ga0495629_0009305
402 Ga0495629_0032926
403 Ga0495629_0062494
404 Ga0495638_0029361
405 Ga0495651_0001640
406 Ga0495651_0036893
407 Ga0495653_0005830
408 Ga0495582_0022048
409 Ga0495582_0031683
410 Ga0495639_0024333
411 Ga0495628_0054153
412 Ga0495632_0025815
413 Ga0495652_0015113
414 Ga0495665_0005790
415 Ga0495645_0045215
416 Ga0495667_0006684
417 Ga0495656_0001559
418 Ga0495668_0011483
419 Ga0495634_0002523
420 Ga0495634_0010633
421 Ga0495625_0000158
422 Ga0495635_0027157
423 Ga0495613_0078382
424 Ga0495624_0002520
425 Ga0495600_0015547
426 Ga0495604_0000969
427 Ga0495674_0092447
428 Ga0495676_0106130
429 Ga0495680_0010982
430 Ga0495675_0025503
431 Ga0495675_0028596
432 Ga0495684_0032011
433 Ga0495602_0068639
434 Ga0496102_0124414
435 Ga0496104_0007456
436 Ga0496104_0030260
437 Ga0496121_0001451
438 Ga0496121_0030924
439 Ga0496123_0000400
440 Ga0496125_0000744
441 Ga0496125_0006206
442 Ga0496126_0027616
443 Ga0501032_0008540
444 Ga0501034_0000108
445 Ga0501036_0019757
446 Ga0501037_0000713
447 Ga0501039_0004020
448 Ga0501046_0000488
449 Ga0501046_0052957
450 Ga0501047_0000564
451 Ga0501048_0013815
452 Ga0501068_0084405
453 Ga0501070_0005913
454 Ga0501074_0032798
455 Ga0501198_000009
456 Ga0501222_000001
457 Ga0501035_0001446
458 Ga0501045_0001517
459 nmdc:mga03n38_23113_c1
460 nmdc:mga00v17_41188_c1
461 nmdc:mga0k408_61473_c1
462 nmdc:mga06z11_13738_c1
463 nmdc:mga0sz30_8618_c2
464 Ga0495601_0009155
465 Ga0495601_0017916
466 Ga0495612_0011964
467 Ga0495595_0009045
468 Ga0495619_0003420
469 Ga0495619_0029862
470 Ga0500566_0000400
471 Ga0500556_0012394
472 Ga0500572_000121
473 Ga0500595_000181
474 Ga0500595_000799
475 Ga0500595_015149
476 Ga0500608_006627
477 Ga0500559_0004099
478 Ga0500564_041539
479 Ga0500573_0014722
480 Ga0500589_042283
481 Ga0500590_047065
482 Ga0500603_000217
483 Ga0500630_013817
484 Ga0500639_000219
485 Ga0500637_0000116
486 Ga0500596_000294
487 Ga0500596_004419
488 Ga0501084_0029003
489 Ga0500661_001884
490 2513691553
491 2513877747
492 2514015062
493 2617350008
494 2723845462
495 2793083351
496 2805917125
497 2824630811
498 2824637442
499 2824646309
500 2824675873
501 2824691995
502 2824696597
503 2824717473
504 2824726731
505 2824776752
506 2838125409
507 2841941931
508 2841951365
509 2841968636
510 2841976163
511 2841987528
512 2847944700
513 2849081073
514 2874612453
515 2889038897
516 2920762388
517 8006943675
518 8006983926
519 8019542236
520 8056674204

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07167

PhaC_N

Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus

126

295

0.98

PF12551

PHBC_N

Poly-beta-hydroxybutyrate polymerase N terminal

46

88

0.96

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

268

539

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6k3c-assembly1.cif.gz_A crystal structure of class i pha synthase (phac) mutant from chromobacterium sp. usm2 bound to coenzyme a. 0.8834 201 574
5xav-assembly1.cif.gz_B structure of phac from chromobacterium sp. usm2 0.8762 201 574
5xav-assembly1.cif.gz_A structure of phac from chromobacterium sp. usm2 0.8681 201 574
6k3c-assembly1.cif.gz_A crystal structure of class i pha synthase (phac) mutant from chromobacterium sp. usm2 bound to coenzyme a. 0.8508 201 574
5xav-assembly1.cif.gz_B structure of phac from chromobacterium sp. usm2 0.8474 201 574
ID Description Score Start End Superfamily
af_A0A0R0KP61_46_233_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7654 284 495 3.40.50.1820
af_Q7JKU8_104_309_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7305 221 500 3.40.50.1820
af_O07427_2_279_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7305 207 497 3.40.50.1820
af_D3ZSE3_131_421_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7277 207 345 3.40.50.1820
af_A0A0R0EQP0_201_384_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7239 225 342 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A1I5AME1-F1-model_v4 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 0.9887 218 327 GO:0016746
GO:0042619
AF-A0A433BVB0-F1-model_v4 Alpha/beta fold hydrolase 0.969 219 574 GO:0016787
AF-A0A448CAK2-F1-model_v4 deleted 0.9667 195 574
AF-A0A5C6TYN3-F1-model_v4 Poly-beta-hydroxybutyrate polymerase N-terminal domain-containing protein 0.9661 196 359 GO:0016746
GO:0042619
AF-A0A212DPV9-F1-model_v4 deleted 0.9653 195 350

Map