F369420

General Info

Members Datasets Scaffolds Average Seq Length
260 177 254 192

Family's Representative Sequence

Representative Sequence 3300005564|Ga0070664_100965467|Ga0070664_1009654671
Length 208
Sequence MSRKESHKMDRDIAARMNAKVDWFFNKAARWQEEYEKLRMIVLDCGLTEELKWGCPCYTFDDTNVVLIHGFKDYCALLFMKGALLQDDAGILVQQTENVQSARQIRFKSIRDIYDLESVLKTYIHQAIEVEKSGLKVKMKKTKEFPMPEEFQRKLDSNKKLRKAFDSLTPGRQRGYLLYFSSAKQSKTRVQRVEKYIPQILDGKGVDD

Samples

Sample ID Description Type Environment
1 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
2 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
3 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
4 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
5 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
6 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
7 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
10 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
11 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
83 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
125 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
129 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
130 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
131 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
132 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
133 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
134 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
135 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
136 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
137 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
140 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
141 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
142 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
159 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
160 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
161 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
162 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
163 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
164 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
165 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
173 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.69
Metatranscriptomes 0
Isolates 2.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.85
Nodule 0
Rhizoplane 1.92
Rhizosphere 91.92
Stem 0
Stem Tuber 0
Unclassified 2.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000881 3300002737 Bacteria 19655
2 rootL2_10182664 3300003322 Bacteria 1233
3 rootL2_10341883 3300003322 Bacteria 2127
4 Ga0055535_1001119 3300003761 Bacteria 16226
5 Ga0055542_1003179 3300003762 Bacteria 4630
6 Ga0065712_10068102 3300005290 Bacteria 14685
7 Ga0070658_10064524 3300005327 Bacteria 2987
8 Ga0070670_100457397 3300005331 Bacteria 1132
9 Ga0070677_10369122 3300005333 Bacteria 748
10 Ga0070666_10000042 3300005335 Bacteria 112296
11 Ga0070680_100095922 3300005336 Bacteria 2459
12 Ga0070680_100376045 3300005336 Bacteria 1209
13 Ga0070682_100006246 3300005337 Bacteria 6682
14 Ga0068868_100056485 3300005338 Bacteria 3100
15 Ga0068868_100198873 3300005338 Bacteria 1670
16 Ga0070668_100647876 3300005347 Unclassified 928
17 Ga0070675_100139814 3300005354 Bacteria 2069
18 Ga0070671_100004302 3300005355 Bacteria 11271
19 Ga0070667_100164299 3300005367 Bacteria 1957
20 Ga0070708_100589728 3300005445 Bacteria 1048
21 Ga0070678_100111920 3300005456 Bacteria 2137
22 Ga0070662_100375507 3300005457 Bacteria 1169
23 Ga0070681_10317452 3300005458 Bacteria 1467
24 Ga0068867_100299539 3300005459 Unclassified 1325
25 Ga0070685_10000872 3300005466 Bacteria 16341
26 Ga0070706_100000131 3300005467 Bacteria 92723
27 Ga0070707_100339353 3300005468 Bacteria 1460
28 Ga0070679_100066242 3300005530 Bacteria 3600
29 Ga0068853_100068873 3300005539 Bacteria 3077
30 Ga0068853_100075817 3300005539 Bacteria 2935
31 Ga0068853_100659424 3300005539 Unclassified 996
32 Ga0070672_100222584 3300005543 Bacteria 1583
33 Ga0070672_100796325 3300005543 Bacteria 831
34 Ga0070696_100139359 3300005546 Bacteria 1771
35 Ga0070693_100079921 3300005547 Bacteria 1947
36 Ga0068855_100000375 3300005563 Bacteria 55321
37 Ga0068855_100007266 3300005563 Bacteria 13430
38 Ga0070664_100965467 3300005564 Unclassified 800
39 Ga0068857_100102914 3300005577 Bacteria 2564
40 Ga0068857_100854110 3300005577 Bacteria 871
41 Ga0068856_100034086 3300005614 Bacteria 4987
42 Ga0068856_100636483 3300005614 Bacteria 1087
43 Ga0068856_101127975 3300005614 Bacteria 801
44 Ga0070702_100607337 3300005615 Bacteria 821
45 Ga0068852_100003800 3300005616 Bacteria 10597
46 Ga0068852_100174514 3300005616 Bacteria 2017
47 Ga0068852_100600999 3300005616 Bacteria 1104
48 Ga0068859_100000768 3300005617 Bacteria 32376
49 Ga0068864_100026441 3300005618 Bacteria 4894
50 Ga0068864_100161574 3300005618 Bacteria 2036
51 Ga0068861_100358432 3300005719 Bacteria 1282
52 Ga0068851_10066808 3300005834 Bacteria 1853
53 Ga0068851_10514562 3300005834 Unclassified 719
54 Ga0068863_100164219 3300005841 Bacteria 2129
55 Ga0068863_100332774 3300005841 Bacteria 1476
56 Ga0068858_100066234 3300005842 Bacteria 3343
57 Ga0068858_100244690 3300005842 Bacteria 1702
58 Ga0068860_100000059 3300005843 Bacteria 196400
59 Ga0068860_100168986 3300005843 Bacteria 2112
60 Ga0068862_100046599 3300005844 Bacteria 3698
61 Ga0068862_100417051 3300005844 Bacteria 1259
62 Ga0068862_100570427 3300005844 Bacteria 1083
63 Ga0070712_100048116 3300006175 Bacteria 2955
64 Ga0075366_10000076 3300006195 Bacteria 38500
65 Ga0097621_100000408 3300006237 Bacteria 30010
66 Ga0097621_100307169 3300006237 Bacteria 1402
67 Ga0068871_100002053 3300006358 Bacteria 13649
68 Ga0068871_100108496 3300006358 Bacteria 2333
69 Ga0068871_100322091 3300006358 Bacteria 1361
70 Ga0068871_100769744 3300006358 Bacteria 886
71 Ga0075428_100010923 3300006844 Bacteria 10100
72 Ga0075433_10008765 3300006852 Bacteria 8071
73 Ga0075434_100708784 3300006871 Bacteria 1024
74 Ga0097620_100000768 3300006931 Bacteria 32376
75 Ga0105240_10001435 3300009093 Bacteria 40778
76 Ga0105240_10064535 3300009093 Unclassified 4549
77 Ga0105240_10967921 3300009093 Bacteria 912
78 Ga0111539_10093353 3300009094 Bacteria 3535
79 Ga0111539_10577573 3300009094 Bacteria 1309
80 Ga0105245_10291511 3300009098 Bacteria 1598
81 Ga0105247_10283502 3300009101 Bacteria 1144
82 Ga0105243_10095437 3300009148 Bacteria 2458
83 Ga0105241_10000820 3300009174 Bacteria 23583
84 Ga0105241_10000853 3300009174 Bacteria 23134
85 Ga0105241_10019841 3300009174 Bacteria 4961
86 Ga0105241_10290948 3300009174 Bacteria 1398
87 Ga0105242_10035482 3300009176 Bacteria 3999
88 Ga0105242_10081832 3300009176 Unclassified 2701
89 Ga0105242_11125947 3300009176 Unclassified 800
90 Ga0105248_10069076 3300009177 Unclassified 3967
91 Ga0105237_10005044 3300009545 Bacteria 15032
92 Ga0105237_10009084 3300009545 Bacteria 10682
93 Ga0105237_10017068 3300009545 Bacteria 7533
94 Ga0105237_10088771 3300009545 Bacteria 3081
95 Ga0105238_10006137 3300009551 Bacteria 11930
96 Ga0105249_10001650 3300009553 Bacteria 19547
97 Ga0105249_10344314 3300009553 Bacteria 1508
98 Ga0105239_10000945 3300010375 Bacteria 40925
99 Ga0105239_10003770 3300010375 Bacteria 18441
100 Ga0105239_10812179 3300010375 Bacteria 1072
101 Ga0105239_11360235 3300010375 Bacteria 819
102 Ga0105246_10003384 3300011119 Bacteria 9663
103 Ga0105246_10024300 3300011119 Bacteria 3935
104 Ga0157371_10005892 3300013102 Bacteria 10236
105 Ga0157371_10551359 3300013102 Bacteria 854
106 Ga0157370_10189113 3300013104 Bacteria 1911
107 Ga0157370_10499993 3300013104 Bacteria 1116
108 Ga0157374_10665554 3300013296 Unclassified 1053
109 Ga0157378_10214188 3300013297 Bacteria 1828
110 Ga0157378_10353264 3300013297 Bacteria 1436
111 Ga0157378_10372781 3300013297 Bacteria 1400
112 Ga0157378_11348814 3300013297 Bacteria 755
113 Ga0163162_10004176 3300013306 Bacteria 13879
114 Ga0163162_10025120 3300013306 Bacteria 5888
115 Ga0163162_10029829 3300013306 Bacteria 5400
116 Ga0163162_11146161 3300013306 Unclassified 882
117 Ga0157372_10000771 3300013307 Bacteria 34676
118 Ga0157372_10106462 3300013307 Bacteria 3207
119 Ga0157372_10199123 3300013307 Bacteria 2320
120 Ga0157375_10000534 3300013308 Bacteria 34107
121 Ga0157375_10308218 3300013308 Bacteria 1747
122 Ga0157375_10452109 3300013308 Bacteria 1450
123 Ga0157380_10019862 3300014326 Bacteria 5013
124 Ga0157380_10205014 3300014326 Bacteria 1753
125 Ga0157380_10281335 3300014326 Bacteria 1522
126 Ga0157380_10408879 3300014326 Bacteria 1290
127 Ga0157380_10670007 3300014326 Bacteria 1038
128 Ga0157379_10036404 3300014968 Unclassified 4389
129 Ga0157379_10211090 3300014968 Bacteria 1757
130 Ga0157376_10000426 3300014969 Bacteria 27278
131 Ga0157376_10152692 3300014969 Bacteria 2084
132 Ga0157376_11320566 3300014969 Bacteria 752
133 Ga0163161_10000594 3300017792 Bacteria 29004
134 Ga0163161_10507881 3300017792 Bacteria 982
135 Ga0209437_100528 3300025233 Bacteria 26547
136 Ga0209258_100029 3300025242 Bacteria 490648
137 Ga0209148_1000163 3300025254 Bacteria 137449
138 Ga0207656_10045470 3300025321 Bacteria 1879
139 Ga0207656_10306434 3300025321 Unclassified 787
140 Ga0207680_10000448 3300025903 Bacteria 19470
141 Ga0207643_10234549 3300025908 Bacteria 1126
142 Ga0207705_10188160 3300025909 Bacteria 1560
143 Ga0207654_10009548 3300025911 Bacteria 4931
144 Ga0207654_10011575 3300025911 Bacteria 4502
145 Ga0207654_10066109 3300025911 Bacteria 2132
146 Ga0207707_10000738 3300025912 Bacteria 32353
147 Ga0207695_10019324 3300025913 Bacteria 7846
148 Ga0207695_10073086 3300025913 Unclassified 3495
149 Ga0207671_10009549 3300025914 Bacteria 8094
150 Ga0207671_10021452 3300025914 Bacteria 4902
151 Ga0207671_10055684 3300025914 Bacteria 2929
152 Ga0207671_10073130 3300025914 Bacteria 2560
153 Ga0207660_10003448 3300025917 Bacteria 10319
154 Ga0207652_10005167 3300025921 Bacteria 10595
155 Ga0207681_10270864 3300025923 Bacteria 1333
156 Ga0207694_10309349 3300025924 Bacteria 1302
157 Ga0207650_10388496 3300025925 Bacteria 1153
158 Ga0207659_10131756 3300025926 Bacteria 1931
159 Ga0207659_10502516 3300025926 Bacteria 1026
160 Ga0207700_11018875 3300025928 Bacteria 741
161 Ga0207644_10061182 3300025931 Bacteria 2726
162 Ga0207706_10318621 3300025933 Bacteria 1353
163 Ga0207686_10003787 3300025934 Bacteria 8121
164 Ga0207686_10180099 3300025934 Bacteria 1498
165 Ga0207670_10076677 3300025936 Bacteria 2327
166 Ga0207691_10286667 3300025940 Bacteria 1416
167 Ga0207689_10008911 3300025942 Bacteria 8701
168 Ga0207661_10303071 3300025944 Bacteria 1433
169 Ga0207667_10000242 3300025949 Bacteria 76730
170 Ga0207667_10167591 3300025949 Bacteria 2258
171 Ga0207651_10204389 3300025960 Bacteria 1585
172 Ga0207712_10001189 3300025961 Bacteria 17987
173 Ga0207712_10160310 3300025961 Bacteria 1747
174 Ga0207668_10666355 3300025972 Unclassified 912
175 Ga0207658_10134522 3300025986 Bacteria 1991
176 Ga0207677_10013617 3300026023 Bacteria 4719
177 Ga0207703_10006254 3300026035 Bacteria 9523
178 Ga0207703_10118970 3300026035 Bacteria 2265
179 Ga0207639_10617610 3300026041 Unclassified 1001
180 Ga0207639_10900945 3300026041 Bacteria 827
181 Ga0207708_10443710 3300026075 Bacteria 1080
182 Ga0207702_10087725 3300026078 Bacteria 2717
183 Ga0207702_10129529 3300026078 Bacteria 2269
184 Ga0207702_10932233 3300026078 Bacteria 861
185 Ga0207641_10005736 3300026088 Bacteria 10545
186 Ga0207641_10044945 3300026088 Bacteria 3716
187 Ga0207648_10058889 3300026089 Bacteria 3350
188 Ga0207648_10448498 3300026089 Bacteria 1174
189 Ga0207676_10004483 3300026095 Bacteria 9870
190 Ga0207676_10128316 3300026095 Bacteria 2152
191 Ga0207674_10769442 3300026116 Bacteria 929
192 Ga0207675_100289457 3300026118 Bacteria 1593
193 Ga0207683_10061086 3300026121 Bacteria 3315
194 Ga0207698_10002653 3300026142 Bacteria 10637
195 Ga0207698_10565689 3300026142 Bacteria 1116
196 Ga0207428_10120999 3300027907 Bacteria 2007
197 Ga0268266_10335151 3300028379 Bacteria 1419
198 Ga0268265_10191191 3300028380 Bacteria 1768
199 Ga0268264_10000015 3300028381 Bacteria 508501
200 Ga0268264_10179598 3300028381 Bacteria 1921
201 Ga0307515_10091086 3300028794 Bacteria 3815
202 Ga0265327_10000055 3300031251 Bacteria 247188
203 Ga0307412_10071478 3300031911 Bacteria 2369
204 Ga0316583_10064696 3300032133 Bacteria 1280
205 Ga0307510_10013796 3300033180 Bacteria 9579
206 Ga0439448_0147051 3300042005 Bacteria 817
207 Ga0439458_0073018 3300042157 Bacteria 868
208 Ga0466972_0041261 3300044658 Bacteria 2247
209 Ga0466961_0288555 3300044693 Unclassified 1003
210 Ga0495648_0006718 3300046524 Bacteria 9305
211 Ga0495668_0000011 3300046616 Bacteria 472186
212 Ga0495625_0016418 3300046660 Bacteria 5829
213 Ga0495625_0386878 3300046660 Bacteria 876
214 Ga0495660_0198667 3300046810 Bacteria 959
215 Ga0495687_000004 3300047443 Bacteria 779298
216 Ga0495684_0360637 3300047471 Bacteria 1030
217 Ga0495686_0000102 3300047472 Bacteria 177525
218 Ga0495686_0229486 3300047472 Bacteria 1052
219 Ga0495614_0045086 3300048089 Bacteria 1891
220 Ga0496100_0104073 3300048903 Unclassified 1961
221 Ga0496104_0715291 3300048907 Unclassified 909
222 Ga0496106_0364084 3300048909 Unclassified 1162
223 Ga0496110_1046877 3300048913 Unclassified 724
224 Ga0496114_0395302 3300048917 Unclassified 1224
225 Ga0501034_0251551 3300049571 Bacteria 1711
226 Ga0501036_0142699 3300049572 Bacteria 2020
227 Ga0501038_0120531 3300049574 Bacteria 2164
228 Ga0501042_0942165 3300049578 Bacteria 629
229 Ga0501046_0042215 3300049580 Bacteria 3636
230 Ga0501047_0337674 3300049581 Unclassified 1344
231 Ga0501048_0064091 3300049582 Bacteria 2599
232 Ga0501068_0349682 3300049584 Unclassified 950
233 Ga0501069_0082979 3300049585 Bacteria 1807
234 Ga0501073_0354225 3300049589 Bacteria 1013
235 Ga0501074_0001511 3300049590 Bacteria 15703
236 Ga0501074_0355454 3300049590 Bacteria 1040
237 Ga0501207_005844 3300049654 Bacteria 1713
238 Ga0501222_006170 3300049662 Unclassified 1609
239 Ga0501233_148787 3300049668 Bacteria 652
240 Ga0501242_004670 3300049674 Bacteria 1526
241 Ga0501257_006140 3300049686 Unclassified 2663
242 Ga0501080_0196882 3300049742 Bacteria 1851
243 Ga0501083_0097883 3300049744 Bacteria 1935
244 Ga0501035_0019337 3300049822 Bacteria 6266
245 Ga0501044_0024594 3300049823 Bacteria 6391
246 Ga0501045_0041978 3300049824 Bacteria 3329
247 nmdc:mga0k408_96_c1 3300050493 Bacteria 42356
248 nmdc:mga08y16_117158_c1 3300050511 Bacteria 2773
249 nmdc:mga08y16_85415_c1 3300050511 Bacteria 3289
250 nmdc:mga0n895_131374_c1 3300050512 Bacteria 2529
251 nmdc:mga0a205_7466_c1 3300050515 Bacteria 9899
252 Ga0500590_174450 3300053148 Bacteria 941
253 Ga0500616_0000004 3300053153 Bacteria 1002714
254 Ga0501084_0430058 3300054114 Bacteria 1116

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049668 Ga0501233_148787 Ga0501233_148787_18_524 168
2 3300005336 Ga0070680_100376045 Ga0070680_1003760451 169
3 3300005347 Ga0070668_100647876 Ga0070668_1006478761 169
4 3300025972 Ga0207668_10666355 Ga0207668_106663552 169
5 3300048909 Ga0496106_0364084 Ga0496106_0364084_54_563 169
6 3300049581 Ga0501047_0337674 Ga0501047_0337674_803_1318 171
7 3300005615 Ga0070702_100607337 Ga0070702_1006073371 174
8 3300042005 Ga0439448_0147051 Ga0439448_0147051_181_747 179
9 3300042157 Ga0439458_0073018 Ga0439458_0073018_172_738 179
10 3300005335 Ga0070666_10000042 Ga0070666_1000004216 180
11 3300005338 Ga0068868_100056485 Ga0068868_1000564853 180
12 3300005338 Ga0068868_100198873 Ga0068868_1001988732 180
13 3300005616 Ga0068852_100003800 Ga0068852_1000038008 180
14 3300005617 Ga0068859_100000768 Ga0068859_10000076814 180
15 3300005618 Ga0068864_100026441 Ga0068864_1000264411 180
16 3300005834 Ga0068851_10066808 Ga0068851_100668082 180
17 3300005841 Ga0068863_100332774 Ga0068863_1003327743 180
18 3300005842 Ga0068858_100066234 Ga0068858_1000662343 180
19 3300006358 Ga0068871_100769744 Ga0068871_1007697442 180
20 3300006931 Ga0097620_100000768 Ga0097620_10000076814 180
21 3300009098 Ga0105245_10291511 Ga0105245_102915113 180
22 3300009101 Ga0105247_10283502 Ga0105247_102835022 180
23 3300009174 Ga0105241_10000853 Ga0105241_1000085311 180
24 3300009545 Ga0105237_10017068 Ga0105237_1001706812 180
25 3300009553 Ga0105249_10001650 Ga0105249_100016503 180
26 3300011119 Ga0105246_10003384 Ga0105246_100033844 180
27 3300011119 Ga0105246_10024300 Ga0105246_100243002 180
28 3300013297 Ga0157378_10353264 Ga0157378_103532642 180
29 3300013306 Ga0163162_10025120 Ga0163162_100251206 180
30 3300014968 Ga0157379_10211090 Ga0157379_102110902 180
31 3300025321 Ga0207656_10045470 Ga0207656_100454702 180
32 3300025903 Ga0207680_10000448 Ga0207680_1000044816 180
33 3300025911 Ga0207654_10011575 Ga0207654_100115757 180
34 3300025914 Ga0207671_10073130 Ga0207671_100731304 180
35 3300025942 Ga0207689_10008911 Ga0207689_100089114 180
36 3300025960 Ga0207651_10204389 Ga0207651_102043892 180
37 3300025986 Ga0207658_10134522 Ga0207658_101345222 180
38 3300026023 Ga0207677_10013617 Ga0207677_100136174 180
39 3300026035 Ga0207703_10006254 Ga0207703_1000625412 180
40 3300026088 Ga0207641_10005736 Ga0207641_100057365 180
41 3300026095 Ga0207676_10004483 Ga0207676_1000448312 180
42 3300026142 Ga0207698_10002653 Ga0207698_100026539 180
43 3300031911 Ga0307412_10071478 Ga0307412_100714784 183
44 3300010375 Ga0105239_10812179 Ga0105239_108121791 188
45 iso_pu_bacteria 2511231000 2511231193 188
46 iso_pu_bacteria 2582581281 2585156655 188
47 iso_pu_bacteria 2582581282 2585161042 188
48 iso_pu_bacteria 2833640130 2833642463 188
49 iso_pu_bacteria 2818991460 2819679656 189
50 3300006852 Ga0075433_10008765 Ga0075433_100087657 191
51 3300006871 Ga0075434_100708784 Ga0075434_1007087842 191
52 3300050512 nmdc:mga0n895_131374_c1 nmdc:mga0n895_131374_c1_424_999 191
53 3300050515 nmdc:mga0a205_7466_c1 nmdc:mga0a205_7466_c1_6424_6999 191
54 3300003322 rootL2_10182664 rootL2_101826642 192
55 3300003322 rootL2_10341883 rootL2_103418833 192
56 3300003761 Ga0055535_1001119 Ga0055535_100111916 192
57 3300003762 Ga0055542_1003179 Ga0055542_10031794 192
58 3300005290 Ga0065712_10068102 Ga0065712_100681022 192
59 3300005327 Ga0070658_10064524 Ga0070658_100645243 192
60 3300005331 Ga0070670_100457397 Ga0070670_1004573971 192
61 3300005333 Ga0070677_10369122 Ga0070677_103691221 192
62 3300005355 Ga0070671_100004302 Ga0070671_1000043024 192
63 3300005367 Ga0070667_100164299 Ga0070667_1001642994 192
64 3300005445 Ga0070708_100589728 Ga0070708_1005897282 192
65 3300005456 Ga0070678_100111920 Ga0070678_1001119204 192
66 3300005459 Ga0068867_100299539 Ga0068867_1002995392 192
67 3300005466 Ga0070685_10000872 Ga0070685_1000087213 192
68 3300005467 Ga0070706_100000131 Ga0070706_10000013128 192
69 3300005468 Ga0070707_100339353 Ga0070707_1003393532 192
70 3300005539 Ga0068853_100068873 Ga0068853_1000688733 192
71 3300005539 Ga0068853_100659424 Ga0068853_1006594242 192
72 3300005543 Ga0070672_100222584 Ga0070672_1002225843 192
73 3300005546 Ga0070696_100139359 Ga0070696_1001393592 192
74 3300005564 Ga0070664_100965467 Ga0070664_1009654671 192
75 3300005577 Ga0068857_100102914 Ga0068857_1001029143 192
76 3300005614 Ga0068856_100034086 Ga0068856_1000340862 192
77 3300005614 Ga0068856_100636483 Ga0068856_1006364832 192
78 3300005616 Ga0068852_100174514 Ga0068852_1001745143 192
79 3300005616 Ga0068852_100600999 Ga0068852_1006009992 192
80 3300005618 Ga0068864_100161574 Ga0068864_1001615743 192
81 3300005719 Ga0068861_100358432 Ga0068861_1003584322 192
82 3300005841 Ga0068863_100164219 Ga0068863_1001642193 192
83 3300005842 Ga0068858_100244690 Ga0068858_1002446902 192
84 3300005843 Ga0068860_100000059 Ga0068860_100000059164 192
85 3300005843 Ga0068860_100168986 Ga0068860_1001689861 192
86 3300005844 Ga0068862_100046599 Ga0068862_1000465995 192
87 3300005844 Ga0068862_100417051 Ga0068862_1004170512 192
88 3300005844 Ga0068862_100570427 Ga0068862_1005704272 192
89 3300006175 Ga0070712_100048116 Ga0070712_1000481165 192
90 3300006195 Ga0075366_10000076 Ga0075366_1000007614 192
91 3300006237 Ga0097621_100000408 Ga0097621_10000040827 192
92 3300006358 Ga0068871_100002053 Ga0068871_1000020539 192
93 3300006358 Ga0068871_100322091 Ga0068871_1003220912 192
94 3300006844 Ga0075428_100010923 Ga0075428_1000109235 192
95 3300009093 Ga0105240_10001435 Ga0105240_1000143519 192
96 3300009094 Ga0111539_10093353 Ga0111539_100933533 192
97 3300009094 Ga0111539_10577573 Ga0111539_105775731 192
98 3300009148 Ga0105243_10095437 Ga0105243_100954375 192
99 3300009174 Ga0105241_10019841 Ga0105241_100198413 192
100 3300009174 Ga0105241_10290948 Ga0105241_102909483 192
101 3300009176 Ga0105242_10035482 Ga0105242_100354823 192
102 3300009176 Ga0105242_10081832 Ga0105242_100818322 192
103 3300009176 Ga0105242_11125947 Ga0105242_111259472 192
104 3300009177 Ga0105248_10069076 Ga0105248_100690762 192
105 3300009545 Ga0105237_10088771 Ga0105237_100887715 192
106 3300009551 Ga0105238_10006137 Ga0105238_1000613710 192
107 3300009553 Ga0105249_10344314 Ga0105249_103443142 192
108 3300013102 Ga0157371_10005892 Ga0157371_100058928 192
109 3300013102 Ga0157371_10551359 Ga0157371_105513591 192
110 3300013104 Ga0157370_10189113 Ga0157370_101891133 192
111 3300013296 Ga0157374_10665554 Ga0157374_106655542 192
112 3300013297 Ga0157378_10214188 Ga0157378_102141884 192
113 3300013297 Ga0157378_10372781 Ga0157378_103727812 192
114 3300013297 Ga0157378_11348814 Ga0157378_113488142 192
115 3300013306 Ga0163162_10004176 Ga0163162_100041765 192
116 3300013306 Ga0163162_10029829 Ga0163162_100298291 192
117 3300013306 Ga0163162_11146161 Ga0163162_111461612 192
118 3300013307 Ga0157372_10199123 Ga0157372_101991232 192
119 3300013308 Ga0157375_10000534 Ga0157375_1000053412 192
120 3300013308 Ga0157375_10308218 Ga0157375_103082181 192
121 3300013308 Ga0157375_10452109 Ga0157375_104521093 192
122 3300014326 Ga0157380_10019862 Ga0157380_100198624 192
123 3300014326 Ga0157380_10205014 Ga0157380_102050142 192
124 3300014326 Ga0157380_10281335 Ga0157380_102813352 192
125 3300014326 Ga0157380_10408879 Ga0157380_104088793 192
126 3300014326 Ga0157380_10670007 Ga0157380_106700071 192
127 3300014968 Ga0157379_10036404 Ga0157379_100364042 192
128 3300014969 Ga0157376_10000426 Ga0157376_1000042617 192
129 3300014969 Ga0157376_10152692 Ga0157376_101526923 192
130 3300014969 Ga0157376_11320566 Ga0157376_113205661 192
131 3300017792 Ga0163161_10000594 Ga0163161_100005946 192
132 3300017792 Ga0163161_10507881 Ga0163161_105078811 192
133 3300025242 Ga0209258_100029 Ga0209258_10002944 192
134 3300025254 Ga0209148_1000163 Ga0209148_100016323 192
135 3300025909 Ga0207705_10188160 Ga0207705_101881603 192
136 3300025911 Ga0207654_10009548 Ga0207654_100095485 192
137 3300025913 Ga0207695_10019324 Ga0207695_1001932411 192
138 3300025914 Ga0207671_10021452 Ga0207671_100214525 192
139 3300025923 Ga0207681_10270864 Ga0207681_102708642 192
140 3300025924 Ga0207694_10309349 Ga0207694_103093491 192
141 3300025925 Ga0207650_10388496 Ga0207650_103884963 192
142 3300025926 Ga0207659_10131756 Ga0207659_101317564 192
143 3300025931 Ga0207644_10061182 Ga0207644_100611822 192
144 3300025934 Ga0207686_10003787 Ga0207686_100037878 192
145 3300025934 Ga0207686_10180099 Ga0207686_101800993 192
146 3300025936 Ga0207670_10076677 Ga0207670_100766773 192
147 3300025940 Ga0207691_10286667 Ga0207691_102866673 192
148 3300025944 Ga0207661_10303071 Ga0207661_103030712 192
149 3300025961 Ga0207712_10001189 Ga0207712_100011895 192
150 3300025961 Ga0207712_10160310 Ga0207712_101603102 192
151 3300026035 Ga0207703_10118970 Ga0207703_101189703 192
152 3300026041 Ga0207639_10617610 Ga0207639_106176101 192
153 3300026041 Ga0207639_10900945 Ga0207639_109009451 192
154 3300026075 Ga0207708_10443710 Ga0207708_104437102 192
155 3300026078 Ga0207702_10087725 Ga0207702_100877252 192
156 3300026078 Ga0207702_10129529 Ga0207702_101295292 192
157 3300026088 Ga0207641_10044945 Ga0207641_100449452 192
158 3300026089 Ga0207648_10058889 Ga0207648_100588892 192
159 3300026089 Ga0207648_10448498 Ga0207648_104484981 192
160 3300026095 Ga0207676_10128316 Ga0207676_101283164 192
161 3300026116 Ga0207674_10769442 Ga0207674_107694421 192
162 3300026118 Ga0207675_100289457 Ga0207675_1002894572 192
163 3300026121 Ga0207683_10061086 Ga0207683_100610861 192
164 3300026142 Ga0207698_10565689 Ga0207698_105656892 192
165 3300027907 Ga0207428_10120999 Ga0207428_101209992 192
166 3300028379 Ga0268266_10335151 Ga0268266_103351512 192
167 3300028380 Ga0268265_10191191 Ga0268265_101911912 192
168 3300028381 Ga0268264_10000015 Ga0268264_10000015309 192
169 3300028381 Ga0268264_10179598 Ga0268264_101795982 192
170 3300031251 Ga0265327_10000055 Ga0265327_1000005522 192
171 3300032133 Ga0316583_10064696 Ga0316583_100646961 192
172 3300033180 Ga0307510_10013796 Ga0307510_100137969 192
173 3300044658 Ga0466972_0041261 Ga0466972_0041261_995_1573 192
174 3300044693 Ga0466961_0288555 Ga0466961_0288555_345_923 192
175 3300046524 Ga0495648_0006718 Ga0495648_0006718_6044_6625 192
176 3300046616 Ga0495668_0000011 Ga0495668_0000011_217792_218373 192
177 3300046660 Ga0495625_0016418 Ga0495625_0016418_4083_4661 192
178 3300046660 Ga0495625_0386878 Ga0495625_0386878_140_718 192
179 3300046810 Ga0495660_0198667 Ga0495660_0198667_163_744 192
180 3300047443 Ga0495687_000004 Ga0495687_000004_717434_718012 192
181 3300048089 Ga0495614_0045086 Ga0495614_0045086_815_1396 192
182 3300048903 Ga0496100_0104073 Ga0496100_0104073_462_1055 192
183 3300048907 Ga0496104_0715291 Ga0496104_0715291_86_679 192
184 3300048913 Ga0496110_1046877 Ga0496110_1046877_76_669 192
185 3300048917 Ga0496114_0395302 Ga0496114_0395302_395_988 192
186 3300049571 Ga0501034_0251551 Ga0501034_0251551_251_838 192
187 3300049572 Ga0501036_0142699 Ga0501036_0142699_196_774 192
188 3300049574 Ga0501038_0120531 Ga0501038_0120531_911_1489 192
189 3300049578 Ga0501042_0942165 Ga0501042_0942165_21_599 192
190 3300049580 Ga0501046_0042215 Ga0501046_0042215_1582_2169 192
191 3300049582 Ga0501048_0064091 Ga0501048_0064091_732_1319 192
192 3300049584 Ga0501068_0349682 Ga0501068_0349682_251_829 192
193 3300049585 Ga0501069_0082979 Ga0501069_0082979_1197_1775 192
194 3300049589 Ga0501073_0354225 Ga0501073_0354225_139_717 192
195 3300049590 Ga0501074_0001511 Ga0501074_0001511_10206_10784 192
196 3300049590 Ga0501074_0355454 Ga0501074_0355454_211_792 192
197 3300049654 Ga0501207_005844 Ga0501207_005844_748_1332 192
198 3300049662 Ga0501222_006170 Ga0501222_006170_867_1451 192
199 3300049674 Ga0501242_004670 Ga0501242_004670_508_1092 192
200 3300049686 Ga0501257_006140 Ga0501257_006140_42_626 192
201 3300049742 Ga0501080_0196882 Ga0501080_0196882_621_1202 192
202 3300049744 Ga0501083_0097883 Ga0501083_0097883_1134_1721 192
203 3300049822 Ga0501035_0019337 Ga0501035_0019337_4938_5516 192
204 3300049823 Ga0501044_0024594 Ga0501044_0024594_3366_3944 192
205 3300049824 Ga0501045_0041978 Ga0501045_0041978_2189_2767 192
206 3300050493 nmdc:mga0k408_96_c1 nmdc:mga0k408_96_c1_14342_14923 192
207 3300050511 nmdc:mga08y16_117158_c1 nmdc:mga08y16_117158_c1_1192_1776 192
208 3300050511 nmdc:mga08y16_85415_c1 nmdc:mga08y16_85415_c1_213_791 192
209 3300053148 Ga0500590_174450 Ga0500590_174450_206_784 192
210 3300054114 Ga0501084_0430058 Ga0501084_0430058_134_721 192
211 iso_pu_bacteria 2929921140 2929925381 192
212 3300002737 JGI25162J39368_1000881 JGI25162J39368_10008819 193
213 3300005336 Ga0070680_100095922 Ga0070680_1000959223 193
214 3300005337 Ga0070682_100006246 Ga0070682_10000624612 193
215 3300005354 Ga0070675_100139814 Ga0070675_1001398144 193
216 3300005457 Ga0070662_100375507 Ga0070662_1003755072 193
217 3300005458 Ga0070681_10317452 Ga0070681_103174521 193
218 3300005530 Ga0070679_100066242 Ga0070679_1000662426 193
219 3300005539 Ga0068853_100075817 Ga0068853_1000758171 193
220 3300005543 Ga0070672_100796325 Ga0070672_1007963251 193
221 3300005547 Ga0070693_100079921 Ga0070693_1000799212 193
222 3300005563 Ga0068855_100000375 Ga0068855_10000037542 193
223 3300005563 Ga0068855_100007266 Ga0068855_1000072668 193
224 3300005577 Ga0068857_100854110 Ga0068857_1008541101 193
225 3300005614 Ga0068856_101127975 Ga0068856_1011279752 193
226 3300005834 Ga0068851_10514562 Ga0068851_105145621 193
227 3300006237 Ga0097621_100307169 Ga0097621_1003071692 193
228 3300006358 Ga0068871_100108496 Ga0068871_1001084964 193
229 3300009093 Ga0105240_10064535 Ga0105240_100645353 193
230 3300009093 Ga0105240_10967921 Ga0105240_109679212 193
231 3300009174 Ga0105241_10000820 Ga0105241_100008209 193
232 3300009545 Ga0105237_10005044 Ga0105237_100050447 193
233 3300009545 Ga0105237_10009084 Ga0105237_1000908414 193
234 3300010375 Ga0105239_10000945 Ga0105239_1000094510 193
235 3300010375 Ga0105239_10003770 Ga0105239_1000377012 193
236 3300010375 Ga0105239_11360235 Ga0105239_113602351 193
237 3300013104 Ga0157370_10499993 Ga0157370_104999932 193
238 3300013307 Ga0157372_10000771 Ga0157372_1000077110 193
239 3300013307 Ga0157372_10106462 Ga0157372_101064621 193
240 3300025233 Ga0209437_100528 Ga0209437_10052820 193
241 3300025321 Ga0207656_10306434 Ga0207656_103064342 193
242 3300025908 Ga0207643_10234549 Ga0207643_102345492 193
243 3300025911 Ga0207654_10066109 Ga0207654_100661092 193
244 3300025912 Ga0207707_10000738 Ga0207707_100007386 193
245 3300025913 Ga0207695_10073086 Ga0207695_100730864 193
246 3300025914 Ga0207671_10009549 Ga0207671_100095493 193
247 3300025914 Ga0207671_10055684 Ga0207671_100556843 193
248 3300025917 Ga0207660_10003448 Ga0207660_100034485 193
249 3300025921 Ga0207652_10005167 Ga0207652_1000516712 193
250 3300025926 Ga0207659_10502516 Ga0207659_105025162 193
251 3300025928 Ga0207700_11018875 Ga0207700_110188752 193
252 3300025933 Ga0207706_10318621 Ga0207706_103186212 193
253 3300025949 Ga0207667_10000242 Ga0207667_1000024240 193
254 3300025949 Ga0207667_10167591 Ga0207667_101675912 193
255 3300026078 Ga0207702_10932233 Ga0207702_109322331 193
256 3300028794 Ga0307515_10091086 Ga0307515_100910866 193
257 3300047471 Ga0495684_0360637 Ga0495684_0360637_411_992 193
258 3300047472 Ga0495686_0000102 Ga0495686_0000102_172425_173006 193
259 3300047472 Ga0495686_0229486 Ga0495686_0229486_223_813 193
260 3300053153 Ga0500616_0000004 Ga0500616_0000004_766123_766719 193

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08818

DUF1801

Domain of unknown function (DU1801)

31

128

0.97

PF13376

OmdA

Bacteriocin-protection, YdeI or OmpD-Associated

144

203

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2oc6-assembly2.cif.gz_B crystal structure of a protein from the duf1801 family (ydhg, bsu05750) from bacillus subtilis at 1.75 a resolution 0.6262 2 106
7ec1-assembly1.cif.gz_B crystal structure of sdgb (ligand-free form) 0.6058 22 64
7vfn-assembly2.cif.gz_C crystal structure of sdgb (sd peptide-binding form) 0.6018 22 64
1ry9-assembly2.cif.gz_D spa15, a type iii secretion chaperone from shigella flexneri 0.5715 15 119
2fki-assembly1.cif.gz_A nmr structure of protein yjbr from escherichia coli; northeast structural genomics consortium target er226 0.5612 19 142
ID Description Score Start End Superfamily
af_Q2FVG5_6_119_3.90.1150.200 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.9659 1 112 3.90.1150.200
af_Q2FVG5_6_119_3.90.1150.200 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.9414 1 112 3.90.1150.200
af_P0AAT2_2_121_3.90.1150.30 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.7058 16 120 3.90.1150.30
3swgA02 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.6772 19 49 3.65.10.10
af_P0AF50_1_117_3.90.1150.30 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.649 19 114 3.90.1150.30
ID Description Score Start End GO Terms
AF-A0A316DEU9-F1-model_v4 Uncharacterized protein DUF1801 0.9994 1 106
AF-A0A7V9ZMH7-F1-model_v4 DUF1801 domain-containing protein 0.9971 1 124
AF-A0A6J7A2N7-F1-model_v4 Unannotated protein 0.9849 1 97
AF-Q4A027-F1-model_v4 Uncharacterized protein 0.9849 131 192
AF-A0A7V9ZMH7-F1-model_v4 DUF1801 domain-containing protein 0.9813 1 124

Feature Viewer

pLDDT pTM Quality
92.3 0.75 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map