F368989

General Info

Members Datasets Scaffolds Average Seq Length
259 138 259 311

Family's Representative Sequence

Representative Sequence 3300041509|Ga0451843_1017620|Ga0451843_1017620_36_935
Length 299
Sequence VAASAEAIHARFAGARPFAHCVIDDFFDPGFAAALLRDFPGFARGNHLNEHGEAGGKSVVERIRGLGDAWRALDDCAQSAAFLDLVGRITGIPDLLYDRDYFGGGSHDNRDGQSLDVHIDFNHHPRTGWHRRLNLIVYLNPGWQADWGGALQLHRDPRDPSGDEVASVLPLFNRCVIFETTEHSWHGFSEIRLPAECASLSRKSVALYFYTRERPARESAPRHSTVYVDRPLPAHLLPGHVLQADDVDVLHELLARRDQHNLRLYRELEMLQARLDQSAVGRLAGLVRRAAGRWRHARG

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
81 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
82 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
83 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
84 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
85 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
86 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
87 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
88 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
91 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
92 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
101 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
102 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
103 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
104 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
105 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.54
Nodule 0
Rhizoplane 3.09
Rhizosphere 88.8
Stem 0
Stem Tuber 0
Unclassified 6.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100085990 3300005330 Bacteria 2064
2 Ga0070670_100072987 3300005331 Bacteria 2948
3 Ga0070666_10000906 3300005335 Bacteria 18001
4 Ga0070666_10075655 3300005335 Bacteria 2296
5 Ga0070666_10142930 3300005335 Bacteria 1667
6 Ga0070661_100001568 3300005344 Bacteria 15873
7 Ga0070668_100242490 3300005347 Bacteria 1493
8 Ga0070673_100200639 3300005364 Bacteria 1718
9 Ga0070667_100002019 3300005367 Bacteria 17976
10 Ga0070678_100012890 3300005456 Bacteria 5217
11 Ga0068867_100086183 3300005459 Bacteria 2376
12 Ga0070685_10055016 3300005466 Bacteria 2311
13 Ga0068853_100008979 3300005539 Bacteria 8051
14 Ga0068853_100012546 3300005539 Bacteria 6894
15 Ga0068853_100073646 3300005539 Bacteria 2978
16 Ga0068853_100299499 3300005539 Unclassified 1486
17 Ga0070672_100017693 3300005543 Bacteria 5136
18 Ga0070665_100000210 3300005548 Bacteria 101899
19 Ga0070665_100091593 3300005548 Bacteria 3045
20 Ga0070665_100098975 3300005548 Bacteria 2921
21 Ga0070665_100185236 3300005548 Bacteria 2083
22 Ga0070665_100209211 3300005548 Bacteria 1951
23 Ga0070665_100356440 3300005548 Bacteria 1469
24 Ga0068855_100001970 3300005563 Bacteria 25497
25 Ga0068855_100021456 3300005563 Bacteria 7745
26 Ga0068855_100069424 3300005563 Bacteria 4100
27 Ga0068855_100076969 3300005563 Bacteria 3870
28 Ga0068855_100118488 3300005563 Unclassified 3032
29 Ga0068857_100148851 3300005577 Bacteria 2120
30 Ga0068854_100113710 3300005578 Bacteria 2045
31 Ga0068856_100002190 3300005614 Bacteria 20283
32 Ga0068856_100285734 3300005614 Unclassified 1666
33 Ga0068852_100001039 3300005616 Bacteria 18265
34 Ga0068859_100002637 3300005617 Bacteria 18243
35 Ga0068859_100399357 3300005617 Bacteria 1470
36 Ga0068859_100412268 3300005617 Bacteria 1447
37 Ga0068851_10046882 3300005834 Bacteria 2187
38 Ga0068863_100107365 3300005841 Bacteria 2657
39 Ga0068863_100156286 3300005841 Bacteria 2183
40 Ga0068860_100058004 3300005843 Bacteria 3680
41 Ga0068860_100131448 3300005843 Bacteria 2402
42 Ga0068862_100000246 3300005844 Bacteria 60352
43 Ga0097621_100024930 3300006237 Bacteria 4676
44 Ga0068871_100037830 3300006358 Bacteria 3851
45 Ga0068871_100101292 3300006358 Bacteria 2414
46 Ga0068865_100025399 3300006881 Bacteria 3897
47 Ga0068865_100083951 3300006881 Bacteria 2294
48 Ga0097620_100002637 3300006931 Bacteria 18243
49 Ga0097620_100399347 3300006931 Bacteria 1470
50 Ga0097620_100412263 3300006931 Bacteria 1447
51 Ga0105240_10005175 3300009093 Bacteria 19508
52 Ga0105240_10049377 3300009093 Bacteria 5311
53 Ga0105248_10089507 3300009177 Bacteria 3465
54 Ga0105248_10655032 3300009177 Bacteria 1185
55 Ga0105237_10004313 3300009545 Bacteria 16490
56 Ga0105237_10055211 3300009545 Bacteria 3979
57 Ga0105238_10009908 3300009551 Bacteria 9554
58 Ga0105238_10603496 3300009551 Unclassified 1106
59 Ga0105249_10170574 3300009553 Bacteria 2109
60 Ga0105239_10002467 3300010375 Bacteria 23569
61 Ga0105239_10006217 3300010375 Bacteria 13895
62 Ga0105239_10009487 3300010375 Bacteria 10961
63 Ga0105239_10014183 3300010375 Bacteria 8843
64 Ga0105239_10093940 3300010375 Bacteria 3312
65 Ga0157370_10007809 3300013104 Bacteria 11590
66 Ga0157370_10301975 3300013104 Unclassified 1478
67 Ga0157369_10000747 3300013105 Bacteria 41842
68 Ga0157369_10065521 3300013105 Bacteria 3910
69 Ga0157374_10025358 3300013296 Bacteria 5323
70 Ga0157374_10101713 3300013296 Bacteria 2755
71 Ga0157374_10200899 3300013296 Bacteria 1952
72 Ga0157378_10000179 3300013297 Bacteria 60467
73 Ga0157378_10116554 3300013297 Bacteria 2456
74 Ga0163162_10000016 3300013306 Bacteria 250836
75 Ga0163162_10428682 3300013306 Bacteria 1455
76 Ga0157372_10000727 3300013307 Bacteria 35890
77 Ga0157372_10075168 3300013307 Bacteria 3811
78 Ga0157372_10330636 3300013307 Bacteria 1775
79 Ga0157375_10000114 3300013308 Bacteria 78070
80 Ga0157375_10016700 3300013308 Bacteria 6604
81 Ga0157375_10236844 3300013308 Bacteria 1984
82 Ga0163163_10000100 3300014325 Bacteria 91212
83 Ga0163163_10020968 3300014325 Bacteria 6161
84 Ga0163163_10055512 3300014325 Bacteria 3915
85 Ga0157379_10527609 3300014968 Bacteria 1097
86 Ga0157376_10022045 3300014969 Bacteria 4956
87 Ga0157376_10040062 3300014969 Bacteria 3827
88 Ga0157376_10070742 3300014969 Bacteria 2962
89 Ga0207697_10100720 3300025315 Bacteria 1231
90 Ga0207656_10137381 3300025321 Bacteria 1150
91 Ga0207680_10000154 3300025903 Bacteria 33499
92 Ga0207647_10000311 3300025904 Bacteria 40365
93 Ga0207695_10000359 3300025913 Bacteria 104462
94 Ga0207695_10291505 3300025913 Bacteria 1524
95 Ga0207671_10000846 3300025914 Bacteria 38854
96 Ga0207657_10083846 3300025919 Bacteria 2673
97 Ga0207649_10000243 3300025920 Bacteria 44122
98 Ga0207649_10029353 3300025920 Bacteria 3247
99 Ga0207694_10091216 3300025924 Bacteria 2405
100 Ga0207650_10207949 3300025925 Bacteria 1571
101 Ga0207687_10267050 3300025927 Bacteria 1366
102 Ga0207686_10153599 3300025934 Bacteria 1605
103 Ga0207686_10249217 3300025934 Bacteria 1297
104 Ga0207704_10007461 3300025938 Bacteria 5170
105 Ga0207704_10043534 3300025938 Bacteria 2652
106 Ga0207704_10108099 3300025938 Bacteria 1873
107 Ga0207691_10081162 3300025940 Bacteria 2915
108 Ga0207689_10205146 3300025942 Bacteria 1628
109 Ga0207667_10001914 3300025949 Bacteria 26145
110 Ga0207667_10019359 3300025949 Bacteria 7601
111 Ga0207667_10028386 3300025949 Bacteria 6078
112 Ga0207651_10187857 3300025960 Bacteria 1645
113 Ga0207712_10021056 3300025961 Bacteria 4276
114 Ga0207712_10231234 3300025961 Bacteria 1484
115 Ga0207668_10025847 3300025972 Bacteria 3805
116 Ga0207668_10084856 3300025972 Bacteria 2309
117 Ga0207658_10001258 3300025986 Bacteria 20058
118 Ga0207639_10007165 3300026041 Bacteria 7597
119 Ga0207639_10010407 3300026041 Bacteria 6441
120 Ga0207639_10014260 3300026041 Bacteria 5583
121 Ga0207639_10024610 3300026041 Bacteria 4359
122 Ga0207639_10106458 3300026041 Unclassified 2276
123 Ga0207678_10017639 3300026067 Bacteria 6266
124 Ga0207702_10011790 3300026078 Bacteria 7279
125 Ga0207641_10093606 3300026088 Bacteria 2634
126 Ga0207641_10148223 3300026088 Bacteria 2123
127 Ga0207648_10004193 3300026089 Bacteria 14896
128 Ga0207676_10027269 3300026095 Bacteria 4254
129 Ga0207674_10053847 3300026116 Bacteria 4099
130 Ga0207674_10210009 3300026116 Bacteria 1896
131 Ga0207675_100274345 3300026118 Bacteria 1637
132 Ga0207683_10010243 3300026121 Bacteria 7993
133 Ga0268266_10000001 3300028379 Bacteria 4040580
134 Ga0268266_10024238 3300028379 Bacteria 5163
135 Ga0268266_10089712 3300028379 Bacteria 2693
136 Ga0268265_10001345 3300028380 Bacteria 20941
137 Ga0268264_10051540 3300028381 Bacteria 3429
138 Ga0268264_10097469 3300028381 Bacteria 2549
139 Ga0268264_10141793 3300028381 Bacteria 2144
140 Ga0268264_10313984 3300028381 Bacteria 1480
141 Ga0307516_10151364 3300031730 Bacteria 2080
142 Ga0307410_10122934 3300031852 Bacteria 1896
143 Ga0373937_0019634 3300036401 Bacteria 6050
144 Ga0373925_0229818 3300037068 Bacteria 1483
145 Ga0451791_1758778 3300041451 Bacteria 2262
146 Ga0451802_0904478 3300041460 Bacteria 2490
147 Ga0451833_0016951 3300041491 Bacteria 1605
148 Ga0451837_0603709 3300041494 Bacteria 9611
149 Ga0451837_1674587 3300041494 Bacteria 1696
150 Ga0451837_1752781 3300041494 Bacteria 1827
151 Ga0451849_1334568 3300041505 Bacteria 1577
152 Ga0451843_1017620 3300041509 Bacteria 1180
153 Ga0451843_1631600 3300041509 Bacteria 1132
154 Ga0451853_0685244 3300041512 Bacteria 2192
155 Ga0451853_1249626 3300041512 Bacteria 2297
156 Ga0466972_0001221 3300044658 Bacteria 12385
157 Ga0466970_0000110 3300044765 Bacteria 36431
158 Ga0466959_0006802 3300045049 Bacteria 7967
159 Ga0495603_0111414 3300046455 Bacteria 1596
160 Ga0495639_0013471 3300046475 Bacteria 3532
161 Ga0495665_0047590 3300046531 Bacteria 2275
162 Ga0495658_0037196 3300046683 Bacteria 2689
163 Ga0495680_0127969 3300047322 Bacteria 1869
164 Ga0496102_0069742 3300048905 Bacteria 3227
165 Ga0496103_0024393 3300048906 Bacteria 3651
166 Ga0496104_0000012 3300048907 Bacteria 438011
167 Ga0496105_0000011 3300048908 Bacteria 302186
168 Ga0496107_0240766 3300048910 Unclassified 1346
169 Ga0496115_0000063 3300048918 Bacteria 100073
170 Ga0496117_0041452 3300048920 Bacteria 3373
171 Ga0496118_0000226 3300048921 Bacteria 98582
172 Ga0496118_0000667 3300048921 Bacteria 55877
173 Ga0496121_0048400 3300048924 Bacteria 3617
174 Ga0496125_0154226 3300048928 Bacteria 1572
175 Ga0496126_0002153 3300048929 Bacteria 27399
176 Ga0496126_0228703 3300048929 Bacteria 1559
177 Ga0501031_0006875 3300049568 Bacteria 7425
178 Ga0501032_0002244 3300049569 Bacteria 15205
179 Ga0501032_0016178 3300049569 Bacteria 5249
180 Ga0501032_0033082 3300049569 Bacteria 3544
181 Ga0501032_0061925 3300049569 Bacteria 2507
182 Ga0501033_0003463 3300049570 Bacteria 12955
183 Ga0501033_0061578 3300049570 Bacteria 2765
184 Ga0501034_0001418 3300049571 Bacteria 32077
185 Ga0501034_0001597 3300049571 Bacteria 29515
186 Ga0501034_0006899 3300049571 Bacteria 12137
187 Ga0501034_0023667 3300049571 Bacteria 6255
188 Ga0501034_0024918 3300049571 Bacteria 6087
189 Ga0501034_0151929 3300049571 Bacteria 2291
190 Ga0501036_0006096 3300049572 Bacteria 9783
191 Ga0501037_0002171 3300049573 Bacteria 14189
192 Ga0501037_0063550 3300049573 Bacteria 2690
193 Ga0501037_0115736 3300049573 Bacteria 1930
194 Ga0501038_0010032 3300049574 Bacteria 8672
195 Ga0501038_0022751 3300049574 Bacteria 5611
196 Ga0501038_0241877 3300049574 Unclassified 1432
197 Ga0501039_0000942 3300049575 Bacteria 21193
198 Ga0501039_0080633 3300049575 Bacteria 2532
199 Ga0501040_0057630 3300049576 Bacteria 2667
200 Ga0501043_0021624 3300049579 Bacteria 5043
201 Ga0501043_0022512 3300049579 Bacteria 4940
202 Ga0501043_0034771 3300049579 Bacteria 3963
203 Ga0501043_0179213 3300049579 Bacteria 1651
204 Ga0501043_0183274 3300049579 Bacteria 1631
205 Ga0501046_0002913 3300049580 Bacteria 15847
206 Ga0501046_0040171 3300049580 Bacteria 3740
207 Ga0501046_0053289 3300049580 Bacteria 3186
208 Ga0501047_0001629 3300049581 Bacteria 21897
209 Ga0501047_0004417 3300049581 Bacteria 13236
210 Ga0501047_0025283 3300049581 Bacteria 5706
211 Ga0501047_0036135 3300049581 Bacteria 4773
212 Ga0501047_0056846 3300049581 Bacteria 3784
213 Ga0501048_0124840 3300049582 Bacteria 1820
214 Ga0501048_0146247 3300049582 Bacteria 1671
215 Ga0501048_0157196 3300049582 Unclassified 1608
216 Ga0501068_0017475 3300049584 Bacteria 4148
217 Ga0501068_0017825 3300049584 Bacteria 4110
218 Ga0501068_0072711 3300049584 Bacteria 2100
219 Ga0501069_0005526 3300049585 Bacteria 6582
220 Ga0501069_0031659 3300049585 Bacteria 2910
221 Ga0501070_0005424 3300049586 Bacteria 10884
222 Ga0501070_0126326 3300049586 Bacteria 2113
223 Ga0501070_0130751 3300049586 Bacteria 2074
224 Ga0501070_0343400 3300049586 Bacteria 1212
225 Ga0501071_0013682 3300049587 Bacteria 5534
226 Ga0501071_0064615 3300049587 Bacteria 2655
227 Ga0501072_0008155 3300049588 Bacteria 7949
228 Ga0501073_0000246 3300049589 Bacteria 35711
229 Ga0501073_0011042 3300049589 Bacteria 6606
230 Ga0501073_0075071 3300049589 Bacteria 2353
231 Ga0501074_0059615 3300049590 Bacteria 2749
232 Ga0501074_0060255 3300049590 Bacteria 2734
233 Ga0501077_0160389 3300049593 Bacteria 1428
234 Ga0501079_0015281 3300049741 Bacteria 5855
235 Ga0501080_0000872 3300049742 Bacteria 24722
236 Ga0501080_0018942 3300049742 Bacteria 6376
237 Ga0501080_0034760 3300049742 Bacteria 4706
238 Ga0501080_0151605 3300049742 Bacteria 2142
239 Ga0501080_0345451 3300049742 Bacteria 1344
240 Ga0501081_0019987 3300049743 Bacteria 4463
241 Ga0501083_0004487 3300049744 Bacteria 9856
242 Ga0501083_0097410 3300049744 Bacteria 1941
243 Ga0501083_0181171 3300049744 Bacteria 1375
244 Ga0501035_0006534 3300049822 Bacteria 10942
245 Ga0501035_0010927 3300049822 Bacteria 8405
246 Ga0501035_0116504 3300049822 Bacteria 2338
247 Ga0501044_0097180 3300049823 Bacteria 2966
248 Ga0501044_0149277 3300049823 Bacteria 2320
249 Ga0501045_0001807 3300049824 Bacteria 14453
250 Ga0501045_0166814 3300049824 Bacteria 1640
251 Ga0500610_0003536 3300053079 Bacteria 6026
252 Ga0500651_0000174 3300053093 Bacteria 41452
253 Ga0500651_0007063 3300053093 Bacteria 6525
254 Ga0501084_0018436 3300054114 Bacteria 5809
255 Ga0501084_0136816 3300054114 Bacteria 2062
256 Ga0500661_000894 3300055283 Bacteria 5584
257 Ga0501082_0000160 3300060353 Bacteria 57199
258 Ga0501082_0011590 3300060353 Bacteria 7583
259 Ga0501082_0130413 3300060353 Bacteria 2181

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005617 Ga0068859_100412268 Ga0068859_1004122682 267
2 3300006931 Ga0097620_100412263 Ga0097620_1004122632 267
3 3300014969 Ga0157376_10040062 Ga0157376_100400622 277
4 3300010375 Ga0105239_10002467 Ga0105239_1000246713 280
5 3300010375 Ga0105239_10006217 Ga0105239_1000621714 281
6 3300005331 Ga0070670_100072987 Ga0070670_1000729872 289
7 3300005548 Ga0070665_100356440 Ga0070665_1003564402 289
8 3300025925 Ga0207650_10207949 Ga0207650_102079492 289
9 3300013307 Ga0157372_10075168 Ga0157372_100751683 290
10 3300028381 Ga0268264_10313984 Ga0268264_103139841 291
11 3300041494 Ga0451837_1752781 Ga0451837_1752781_133_1116 291
12 3300005614 Ga0068856_100285734 Ga0068856_1002857342 293
13 3300013105 Ga0157369_10065521 Ga0157369_100655212 293
14 3300013296 Ga0157374_10200899 Ga0157374_102008992 293
15 3300026116 Ga0207674_10053847 Ga0207674_100538472 293
16 3300041509 Ga0451843_1017620 Ga0451843_1017620_36_935 294
17 3300049589 Ga0501073_0075071 Ga0501073_0075071_87_1034 294
18 3300041494 Ga0451837_1674587 Ga0451837_1674587_686_1627 299
19 3300010375 Ga0105239_10093940 Ga0105239_100939403 303
20 3300041494 Ga0451837_0603709 Ga0451837_0603709_1593_2546 303
21 3300041505 Ga0451849_1334568 Ga0451849_1334568_159_1091 303
22 3300005539 Ga0068853_100008979 Ga0068853_1000089792 304
23 3300005563 Ga0068855_100021456 Ga0068855_1000214564 304
24 3300005577 Ga0068857_100148851 Ga0068857_1001488512 304
25 3300010375 Ga0105239_10009487 Ga0105239_100094878 304
26 3300013308 Ga0157375_10000114 Ga0157375_1000011439 304
27 3300025934 Ga0207686_10153599 Ga0207686_101535992 304
28 3300025938 Ga0207704_10007461 Ga0207704_100074616 304
29 3300025949 Ga0207667_10028386 Ga0207667_100283863 304
30 3300026041 Ga0207639_10010407 Ga0207639_100104073 304
31 3300026116 Ga0207674_10210009 Ga0207674_102100092 304
32 3300036401 Ga0373937_0019634 Ga0373937_0019634_3912_4826 304
33 3300037068 Ga0373925_0229818 Ga0373925_0229818_357_1271 304
34 3300046455 Ga0495603_0111414 Ga0495603_0111414_64_978 304
35 3300046475 Ga0495639_0013471 Ga0495639_0013471_627_1541 304
36 3300046531 Ga0495665_0047590 Ga0495665_0047590_135_1049 304
37 3300046683 Ga0495658_0037196 Ga0495658_0037196_13_927 304
38 3300047322 Ga0495680_0127969 Ga0495680_0127969_125_1039 304
39 3300048907 Ga0496104_0000012 Ga0496104_0000012_289253_290167 304
40 3300048908 Ga0496105_0000011 Ga0496105_0000011_147848_148762 304
41 3300049569 Ga0501032_0033082 Ga0501032_0033082_2520_3440 304
42 3300049571 Ga0501034_0001418 Ga0501034_0001418_18035_18949 304
43 3300049571 Ga0501034_0001597 Ga0501034_0001597_2499_3419 304
44 3300049574 Ga0501038_0022751 Ga0501038_0022751_719_1639 304
45 3300049579 Ga0501043_0179213 Ga0501043_0179213_283_1197 304
46 3300049581 Ga0501047_0001629 Ga0501047_0001629_6413_7327 304
47 3300049581 Ga0501047_0004417 Ga0501047_0004417_6512_7432 304
48 3300049584 Ga0501068_0017475 Ga0501068_0017475_2570_3490 304
49 3300049585 Ga0501069_0005526 Ga0501069_0005526_5594_6514 304
50 3300049586 Ga0501070_0005424 Ga0501070_0005424_46_966 304
51 3300049586 Ga0501070_0343400 Ga0501070_0343400_126_1040 304
52 3300049588 Ga0501072_0008155 Ga0501072_0008155_4539_5459 304
53 3300049589 Ga0501073_0000246 Ga0501073_0000246_14175_15095 304
54 3300049590 Ga0501074_0060255 Ga0501074_0060255_418_1338 304
55 3300049742 Ga0501080_0000872 Ga0501080_0000872_6066_6980 304
56 3300049742 Ga0501080_0345451 Ga0501080_0345451_94_1008 304
57 3300049744 Ga0501083_0004487 Ga0501083_0004487_111_1031 304
58 3300049823 Ga0501044_0149277 Ga0501044_0149277_861_1781 304
59 3300005335 Ga0070666_10075655 Ga0070666_100756552 305
60 3300005539 Ga0068853_100012546 Ga0068853_1000125462 305
61 3300005548 Ga0070665_100098975 Ga0070665_1000989752 305
62 3300005563 Ga0068855_100069424 Ga0068855_1000694242 305
63 3300005843 Ga0068860_100058004 Ga0068860_1000580042 305
64 3300010375 Ga0105239_10014183 Ga0105239_100141838 305
65 3300025920 Ga0207649_10029353 Ga0207649_100293531 305
66 3300025949 Ga0207667_10019359 Ga0207667_100193593 305
67 3300026041 Ga0207639_10024610 Ga0207639_100246102 305
68 3300028381 Ga0268264_10051540 Ga0268264_100515402 305
69 3300049568 Ga0501031_0006875 Ga0501031_0006875_557_1507 305
70 3300049569 Ga0501032_0002244 Ga0501032_0002244_11615_12565 305
71 3300049570 Ga0501033_0061578 Ga0501033_0061578_618_1568 305
72 3300049571 Ga0501034_0023667 Ga0501034_0023667_2852_3802 305
73 3300049573 Ga0501037_0002171 Ga0501037_0002171_11525_12475 305
74 3300049574 Ga0501038_0010032 Ga0501038_0010032_5886_6836 305
75 3300049579 Ga0501043_0021624 Ga0501043_0021624_2158_3108 305
76 3300049580 Ga0501046_0002913 Ga0501046_0002913_10114_11064 305
77 3300049581 Ga0501047_0056846 Ga0501047_0056846_509_1459 305
78 3300049582 Ga0501048_0157196 Ga0501048_0157196_339_1289 305
79 3300049584 Ga0501068_0072711 Ga0501068_0072711_85_1035 305
80 3300049586 Ga0501070_0130751 Ga0501070_0130751_646_1590 305
81 3300049589 Ga0501073_0011042 Ga0501073_0011042_540_1490 305
82 3300049742 Ga0501080_0018942 Ga0501080_0018942_4241_5191 305
83 3300049822 Ga0501035_0010927 Ga0501035_0010927_7065_8015 305
84 3300049824 Ga0501045_0166814 Ga0501045_0166814_660_1610 305
85 3300005344 Ga0070661_100001568 Ga0070661_10000156810 306
86 3300005563 Ga0068855_100001970 Ga0068855_10000197010 306
87 3300005578 Ga0068854_100113710 Ga0068854_1001137102 306
88 3300009093 Ga0105240_10005175 Ga0105240_100051753 306
89 3300009545 Ga0105237_10004313 Ga0105237_100043136 306
90 3300009551 Ga0105238_10009908 Ga0105238_100099084 306
91 3300013104 Ga0157370_10007809 Ga0157370_100078099 306
92 3300013306 Ga0163162_10000016 Ga0163162_1000001648 306
93 3300025913 Ga0207695_10000359 Ga0207695_1000035972 306
94 3300025914 Ga0207671_10000846 Ga0207671_1000084620 306
95 3300025920 Ga0207649_10000243 Ga0207649_1000024326 306
96 3300025924 Ga0207694_10091216 Ga0207694_100912162 306
97 3300025949 Ga0207667_10001914 Ga0207667_100019146 306
98 3300026041 Ga0207639_10007165 Ga0207639_100071658 306
99 3300041509 Ga0451843_1631600 Ga0451843_1631600_18_1064 306
100 3300045049 Ga0466959_0006802 Ga0466959_0006802_1407_2351 306
101 3300048920 Ga0496117_0041452 Ga0496117_0041452_54_1016 306
102 3300048921 Ga0496118_0000667 Ga0496118_0000667_30370_31332 306
103 3300049741 Ga0501079_0015281 Ga0501079_0015281_76_1020 306
104 3300005330 Ga0070690_100085990 Ga0070690_1000859902 307
105 3300005335 Ga0070666_10000906 Ga0070666_100009067 307
106 3300005335 Ga0070666_10142930 Ga0070666_101429302 307
107 3300005347 Ga0070668_100242490 Ga0070668_1002424902 307
108 3300005364 Ga0070673_100200639 Ga0070673_1002006392 307
109 3300005367 Ga0070667_100002019 Ga0070667_1000020192 307
110 3300005456 Ga0070678_100012890 Ga0070678_1000128902 307
111 3300005459 Ga0068867_100086183 Ga0068867_1000861832 307
112 3300005466 Ga0070685_10055016 Ga0070685_100550162 307
113 3300005539 Ga0068853_100073646 Ga0068853_1000736462 307
114 3300005539 Ga0068853_100299499 Ga0068853_1002994992 307
115 3300005543 Ga0070672_100017693 Ga0070672_1000176932 307
116 3300005548 Ga0070665_100000210 Ga0070665_10000021066 307
117 3300005548 Ga0070665_100091593 Ga0070665_1000915932 307
118 3300005548 Ga0070665_100185236 Ga0070665_1001852362 307
119 3300005548 Ga0070665_100209211 Ga0070665_1002092112 307
120 3300005563 Ga0068855_100076969 Ga0068855_1000769691 307
121 3300005563 Ga0068855_100118488 Ga0068855_1001184882 307
122 3300005614 Ga0068856_100002190 Ga0068856_1000021902 307
123 3300005616 Ga0068852_100001039 Ga0068852_1000010392 307
124 3300005617 Ga0068859_100002637 Ga0068859_10000263716 307
125 3300005617 Ga0068859_100399357 Ga0068859_1003993571 307
126 3300005834 Ga0068851_10046882 Ga0068851_100468822 307
127 3300005841 Ga0068863_100107365 Ga0068863_1001073652 307
128 3300005841 Ga0068863_100156286 Ga0068863_1001562862 307
129 3300005843 Ga0068860_100131448 Ga0068860_1001314482 307
130 3300005844 Ga0068862_100000246 Ga0068862_10000024617 307
131 3300006237 Ga0097621_100024930 Ga0097621_1000249302 307
132 3300006358 Ga0068871_100037830 Ga0068871_1000378303 307
133 3300006358 Ga0068871_100101292 Ga0068871_1001012922 307
134 3300006881 Ga0068865_100025399 Ga0068865_1000253992 307
135 3300006881 Ga0068865_100083951 Ga0068865_1000839512 307
136 3300006931 Ga0097620_100002637 Ga0097620_10000263716 307
137 3300006931 Ga0097620_100399347 Ga0097620_1003993472 307
138 3300009093 Ga0105240_10049377 Ga0105240_100493772 307
139 3300009177 Ga0105248_10089507 Ga0105248_100895072 307
140 3300009177 Ga0105248_10655032 Ga0105248_106550322 307
141 3300009545 Ga0105237_10055211 Ga0105237_100552112 307
142 3300009551 Ga0105238_10603496 Ga0105238_106034961 307
143 3300009553 Ga0105249_10170574 Ga0105249_101705742 307
144 3300013104 Ga0157370_10301975 Ga0157370_103019751 307
145 3300013105 Ga0157369_10000747 Ga0157369_1000074726 307
146 3300013296 Ga0157374_10025358 Ga0157374_100253587 307
147 3300013296 Ga0157374_10101713 Ga0157374_101017132 307
148 3300013297 Ga0157378_10000179 Ga0157378_1000017939 307
149 3300013297 Ga0157378_10116554 Ga0157378_101165542 307
150 3300013306 Ga0163162_10428682 Ga0163162_104286822 307
151 3300013307 Ga0157372_10000727 Ga0157372_100007272 307
152 3300013307 Ga0157372_10330636 Ga0157372_103306362 307
153 3300013308 Ga0157375_10016700 Ga0157375_100167003 307
154 3300013308 Ga0157375_10236844 Ga0157375_102368442 307
155 3300014325 Ga0163163_10000100 Ga0163163_1000010063 307
156 3300014325 Ga0163163_10020968 Ga0163163_100209682 307
157 3300014325 Ga0163163_10055512 Ga0163163_100555122 307
158 3300014968 Ga0157379_10527609 Ga0157379_105276091 307
159 3300014969 Ga0157376_10022045 Ga0157376_100220453 307
160 3300014969 Ga0157376_10070742 Ga0157376_100707422 307
161 3300025315 Ga0207697_10100720 Ga0207697_101007201 307
162 3300025321 Ga0207656_10137381 Ga0207656_101373812 307
163 3300025903 Ga0207680_10000154 Ga0207680_1000015411 307
164 3300025904 Ga0207647_10000311 Ga0207647_1000031133 307
165 3300025913 Ga0207695_10291505 Ga0207695_102915052 307
166 3300025919 Ga0207657_10083846 Ga0207657_100838462 307
167 3300025927 Ga0207687_10267050 Ga0207687_102670502 307
168 3300025934 Ga0207686_10249217 Ga0207686_102492172 307
169 3300025938 Ga0207704_10043534 Ga0207704_100435342 307
170 3300025938 Ga0207704_10108099 Ga0207704_101080991 307
171 3300025940 Ga0207691_10081162 Ga0207691_100811622 307
172 3300025942 Ga0207689_10205146 Ga0207689_102051462 307
173 3300025960 Ga0207651_10187857 Ga0207651_101878571 307
174 3300025961 Ga0207712_10021056 Ga0207712_100210562 307
175 3300025961 Ga0207712_10231234 Ga0207712_102312342 307
176 3300025972 Ga0207668_10025847 Ga0207668_100258472 307
177 3300025972 Ga0207668_10084856 Ga0207668_100848562 307
178 3300025986 Ga0207658_10001258 Ga0207658_1000125810 307
179 3300026041 Ga0207639_10014260 Ga0207639_100142602 307
180 3300026041 Ga0207639_10106458 Ga0207639_101064582 307
181 3300026067 Ga0207678_10017639 Ga0207678_100176394 307
182 3300026078 Ga0207702_10011790 Ga0207702_100117905 307
183 3300026088 Ga0207641_10093606 Ga0207641_100936062 307
184 3300026088 Ga0207641_10148223 Ga0207641_101482231 307
185 3300026089 Ga0207648_10004193 Ga0207648_100041932 307
186 3300026095 Ga0207676_10027269 Ga0207676_100272695 307
187 3300026118 Ga0207675_100274345 Ga0207675_1002743451 307
188 3300026121 Ga0207683_10010243 Ga0207683_100102439 307
189 3300028379 Ga0268266_10000001 Ga0268266_100000011334 307
190 3300028379 Ga0268266_10024238 Ga0268266_100242384 307
191 3300028379 Ga0268266_10089712 Ga0268266_100897122 307
192 3300028380 Ga0268265_10001345 Ga0268265_100013454 307
193 3300028381 Ga0268264_10097469 Ga0268264_100974692 307
194 3300028381 Ga0268264_10141793 Ga0268264_101417932 307
195 3300031730 Ga0307516_10151364 Ga0307516_101513642 307
196 3300031852 Ga0307410_10122934 Ga0307410_101229342 307
197 3300041451 Ga0451791_1758778 Ga0451791_1758778_783_1742 307
198 3300041460 Ga0451802_0904478 Ga0451802_0904478_115_1080 307
199 3300041491 Ga0451833_0016951 Ga0451833_0016951_248_1213 307
200 3300041512 Ga0451853_0685244 Ga0451853_0685244_739_1704 307
201 3300041512 Ga0451853_1249626 Ga0451853_1249626_130_1056 307
202 3300044658 Ga0466972_0001221 Ga0466972_0001221_6346_7293 307
203 3300044765 Ga0466970_0000110 Ga0466970_0000110_14560_15507 307
204 3300048905 Ga0496102_0069742 Ga0496102_0069742_1620_2561 307
205 3300048906 Ga0496103_0024393 Ga0496103_0024393_552_1493 307
206 3300048910 Ga0496107_0240766 Ga0496107_0240766_190_1137 307
207 3300048918 Ga0496115_0000063 Ga0496115_0000063_5923_6858 307
208 3300048921 Ga0496118_0000226 Ga0496118_0000226_41728_42675 307
209 3300048924 Ga0496121_0048400 Ga0496121_0048400_1416_2363 307
210 3300048928 Ga0496125_0154226 Ga0496125_0154226_627_1556 307
211 3300048929 Ga0496126_0002153 Ga0496126_0002153_5712_6647 307
212 3300048929 Ga0496126_0228703 Ga0496126_0228703_232_1179 307
213 3300049569 Ga0501032_0016178 Ga0501032_0016178_3968_4915 307
214 3300049569 Ga0501032_0061925 Ga0501032_0061925_1453_2400 307
215 3300049570 Ga0501033_0003463 Ga0501033_0003463_5452_6399 307
216 3300049571 Ga0501034_0006899 Ga0501034_0006899_142_1089 307
217 3300049571 Ga0501034_0024918 Ga0501034_0024918_1361_2308 307
218 3300049571 Ga0501034_0151929 Ga0501034_0151929_770_1717 307
219 3300049572 Ga0501036_0006096 Ga0501036_0006096_5452_6399 307
220 3300049573 Ga0501037_0063550 Ga0501037_0063550_991_1938 307
221 3300049573 Ga0501037_0115736 Ga0501037_0115736_697_1644 307
222 3300049574 Ga0501038_0241877 Ga0501038_0241877_219_1166 307
223 3300049575 Ga0501039_0000942 Ga0501039_0000942_12737_13684 307
224 3300049575 Ga0501039_0080633 Ga0501039_0080633_521_1468 307
225 3300049576 Ga0501040_0057630 Ga0501040_0057630_1537_2484 307
226 3300049579 Ga0501043_0022512 Ga0501043_0022512_3383_4330 307
227 3300049579 Ga0501043_0034771 Ga0501043_0034771_1003_1950 307
228 3300049579 Ga0501043_0183274 Ga0501043_0183274_639_1586 307
229 3300049580 Ga0501046_0040171 Ga0501046_0040171_2271_3218 307
230 3300049580 Ga0501046_0053289 Ga0501046_0053289_1410_2357 307
231 3300049581 Ga0501047_0025283 Ga0501047_0025283_3695_4642 307
232 3300049581 Ga0501047_0036135 Ga0501047_0036135_3074_4021 307
233 3300049582 Ga0501048_0124840 Ga0501048_0124840_99_1046 307
234 3300049582 Ga0501048_0146247 Ga0501048_0146247_521_1468 307
235 3300049584 Ga0501068_0017825 Ga0501068_0017825_1943_2890 307
236 3300049585 Ga0501069_0031659 Ga0501069_0031659_1697_2644 307
237 3300049586 Ga0501070_0126326 Ga0501070_0126326_1003_1950 307
238 3300049587 Ga0501071_0013682 Ga0501071_0013682_4427_5374 307
239 3300049587 Ga0501071_0064615 Ga0501071_0064615_332_1279 307
240 3300049590 Ga0501074_0059615 Ga0501074_0059615_393_1340 307
241 3300049593 Ga0501077_0160389 Ga0501077_0160389_294_1241 307
242 3300049742 Ga0501080_0034760 Ga0501080_0034760_220_1167 307
243 3300049742 Ga0501080_0151605 Ga0501080_0151605_1077_2024 307
244 3300049743 Ga0501081_0019987 Ga0501081_0019987_339_1286 307
245 3300049744 Ga0501083_0097410 Ga0501083_0097410_171_1118 307
246 3300049744 Ga0501083_0181171 Ga0501083_0181171_321_1268 307
247 3300049822 Ga0501035_0006534 Ga0501035_0006534_36_983 307
248 3300049822 Ga0501035_0116504 Ga0501035_0116504_908_1855 307
249 3300049823 Ga0501044_0097180 Ga0501044_0097180_1800_2747 307
250 3300049824 Ga0501045_0001807 Ga0501045_0001807_13245_14192 307
251 3300053079 Ga0500610_0003536 Ga0500610_0003536_4978_5928 307
252 3300053093 Ga0500651_0000174 Ga0500651_0000174_26018_26965 307
253 3300053093 Ga0500651_0007063 Ga0500651_0007063_4047_4988 307
254 3300054114 Ga0501084_0018436 Ga0501084_0018436_2183_3130 307
255 3300054114 Ga0501084_0136816 Ga0501084_0136816_369_1316 307
256 3300055283 Ga0500661_000894 Ga0500661_000894_4561_5511 307
257 3300060353 Ga0501082_0000160 Ga0501082_0000160_8356_9303 307
258 3300060353 Ga0501082_0011590 Ga0501082_0011590_6343_7290 307
259 3300060353 Ga0501082_0130413 Ga0501082_0130413_109_1056 307

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13640

2OG-FeII_Oxy_3

2OG-Fe(II) oxygenase superfamily

105

210

0.9

PF13661

2OG-FeII_Oxy_4

2OG-Fe(II) oxygenase superfamily

107

209

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mgu-assembly1.cif.gz_A-2 structure of s. cerevisiae tpa1 protein, a proline hydroxylase modifying ribosomal protein rps23 0.73 1 222
3kt4-assembly1.cif.gz_A crystal structure of tpa1 from saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex 0.7016 1 225
4nhm-assembly1.cif.gz_A crystal structure of tpa1p from saccharomyces cerevisiae, termination and polyadenylation protein 1, in complex with n-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (iox3/un9) 0.7004 1 225
6zbn-assembly4.cif.gz_D hif prolyl hydroxylase 2 (phd2/egln1) in complex with tert-butyl 6-(5-hydroxy-4-(1h-1,2,3-triazol-1-yl)-1h-pyrazol-1-yl)nicotinate (iox4) 0.6992 3 214
3kt7-assembly1.cif.gz_A crystal structure of tpa1 from saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex 0.6982 1 222
ID Description Score Start End Superfamily
af_Q09973_31_246_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.7242 1 219 2.60.120.620
af_Q09973_31_246_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.7151 1 219 2.60.120.620
af_Q09973_249_474_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.6921 2 215 2.60.120.620
3kt4A01 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.691 2 225 2.60.120.620
af_Q9I7H9_57_285_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.6788 3 215 2.60.120.620
ID Description Score Start End GO Terms
AF-A0A7Y3H834-F1-model_v4 2OG-Fe(II) oxygenase 0.9175 2 212
AF-A0A5E5BN94-F1-model_v4 Proline hydroxylase 0.8945 1 288
AF-A0A2W5KM60-F1-model_v4 Proline hydroxylase 0.8895 1 288 GO:0005737
GO:0006449
GO:0031543
AF-A0A1E4KWN9-F1-model_v4 deleted 0.8857 2 307
AF-A0A382YNM6-F1-model_v4 Prolyl 4-hydroxylase alpha subunit Fe(2+) 2OG dioxygenase domain-containing protein 0.8841 78 224

Feature Viewer

pLDDT pTM Quality
81.49 0.79 High
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Predicted Structure (AlphaFold2)

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