F368366

General Info

Members Datasets Scaffolds Average Seq Length
258 208 218 1103

Family's Representative Sequence

Representative Sequence 3300048906|Ga0496103_0008499|Ga0496103_0008499_181_4281
Length 1333
Sequence MNAPLPKLVLETTEIDTSGDPTWYRDAVIYQCNVKAFVDSNGDGVGDFQGLTGKLDYVKDLGVNTLWLMPFYPSPLRDDGYDIAAYEDVHPQYGTLQDFRDMLEEAHKRELRVIIELVINHTSDAHPWFQAARMAPPGSPERDFYVWSDTDQLYQGTRIIFTDTEKSNWTWDPVAKAYFWHRFFSHQPDLNFDNPQVLEAVFRTMRFWLDMGVDGFRLDAIPYLIERDGTSNENLPETHVVIKALRAAIDANYKDRFLLAEANMWPEDVREYFGDGDECHMAYHFPLMPRMYMAIAQEDRDPIVEILQQTPEIPEGCQWAIFLRNHDELTLEMVTNRERDYMYTTYAADLQARINLGIRRRLAPLMDNDKDRIKLMNSMLLSMPGSPIIYYGDEIGMGDNVFVGDRNGVRTPMQWSPDRNAGFSRADPQRLYLPPIMDAMYGYEAVNVEAQLRDKSSLLHWTRRMLAVRKTSRAFGRGRRTFLKPGNRKILAYISEHDDDAILSVFNLSRAAQPVELDLSAFKGRVPVEMLGRTSFPPIGELPYLLTLPSHGFYWFKLADEAPMPSWHQEGVALLDRPVIVLFDGWTSLLKDRVMPWRIGFADRLIHQFETDTLPPHIEAQRWYASKGSRIARARLADSAIWDIDGLSWMLPLLELEGLPERATYFMPLALAWEDRDEERMKCLQPAAIAKVRQKANVGVMGDAFFDEAFCRALVRGIVSDTEMPTAHGRLHFRPTSLGRELVLSAIKDLPVSRPTAMSSNTVVTLGETLFLKGYRQLRRGINPELEMGRFLTEEAGFLHGVPVAGALEYLGSDGSVFTLALLQAYVPNQGDGWTWTLAYLERVLTELRDADGPQPDAPHGAFLALIAILGRRTAELHNALGRRTGHPAFDPEPMTGADRRAMRDSVRAQGQATLVQLREQLAGLPPATQEDARRLLERPGAIDGFVDALPLEGAAGWRSRFHGDYHLGQVLLARNDFVIIDFEGEPARSIEERRAKQSPLRDVAGMLRSFNYARWSALRRAAQNAVELARPAPPSWTAMPRPWRPRPARSTRSCCACSSSRRPSTNCAPISRRASMDTLTFYLEPLRAFLFQIGAFVPRLLFATLVVVAGWLIAKVVRFAVIRGLHAINFPVLTERAGIDNFLRQGGMVQDATVVFGALAYWMVILASLVVAFNGLGLSYVTDLLARVMWFVPNVFVAMLVLAFGAYFARFVGDAVTTYGRHAGIQDAVLLGKVAQYAILLFVVLIALDQVKIGGDIVRQSFLIILAGVVFALALAFGLAGKDWAADRIEDWWPRKKRLADRAAPRAPAATPPASAWPARPAQNLHDDRPHP

Samples

Sample ID Description Type Environment
1 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
2 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
3 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
4 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
5 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
6 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
7 2643221658 Variovorax sp. Root411 Isolate Unclassified
8 2643221672 Variovorax sp. Root434 Isolate Unclassified
9 2643221683 Variovorax sp. Root473 Isolate Unclassified
10 2738541277 Variovorax sp. GV051 Isolate Unclassified
11 2738541307 Variovorax sp. GV008 Isolate Unclassified
12 2738543013 Variovorax sp. BT01 Isolate Unclassified
13 2738543019 Variovorax sp. GV040 Isolate Unclassified
14 2818991446 Variovorax sp. 1180 Isolate Unclassified
15 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
16 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
17 2842677519 Variovorax sp. R-72495 Isolate Unclassified
18 2842733646 Variovorax sp. R-72446 Isolate Unclassified
19 2842747753 Variovorax sp. R-72060 Isolate Unclassified
20 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
21 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
22 2899924645 Variovorax sp. 369 Isolate Unclassified
23 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
24 2904456579 Variovorax sp. 2002 Isolate Unclassified
25 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
26 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
27 2928037797 Variovorax sp. 1126 Isolate Unclassified
28 2928044640 Variovorax sp. 1128 Isolate Unclassified
29 2928051484 Variovorax sp. 1133 Isolate Unclassified
30 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
31 2928070936 Variovorax gossypii 1167 Isolate Unclassified
32 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
33 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
34 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
35 2929520902 Variovorax beijingensis 502 Isolate Unclassified
36 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
37 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
38 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
39 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
40 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
41 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
42 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
43 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
44 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
45 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
46 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
47 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
48 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
49 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
50 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
51 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
52 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
53 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
54 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
55 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
56 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
57 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
58 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
59 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
60 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
61 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
62 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
63 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
64 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
65 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
66 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
67 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
68 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
69 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
70 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
71 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
72 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
73 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
74 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
75 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
76 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
77 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
78 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
79 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
80 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
81 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
82 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
83 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
84 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
85 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
86 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
87 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
88 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
89 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
90 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
91 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
92 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
93 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
94 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
97 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
99 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
102 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
107 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
109 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
110 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
141 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
142 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
143 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
144 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
145 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
146 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
147 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
148 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
149 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
150 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
151 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
152 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
153 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
154 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
155 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
156 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
157 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
158 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
159 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
160 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
161 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
162 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
163 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
164 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
165 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
166 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
167 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
168 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
169 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
170 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
171 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
172 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
173 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
174 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
175 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
176 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
177 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
178 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
179 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
180 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
184 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
185 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
192 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
193 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
194 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
195 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
196 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
197 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
198 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
199 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
200 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
201 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
202 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
203 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
204 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
205 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
206 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
207 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
208 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.5
Metatranscriptomes 0
Isolates 15.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.05
Nodule 0.39
Rhizoplane 3.88
Rhizosphere 62.4
Stem 0
Stem Tuber 0
Unclassified 16.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055535_1000191 3300003761 Bacteria 65325
2 Ga0055542_1000021 3300003762 Bacteria 331499
3 Ga0055530_10000380 3300003791 Bacteria 40324
4 Ga0055540_1000526 3300003792 Bacteria 28885
5 Ga0070676_10003160 3300005328 Bacteria 8523
6 Ga0070683_100002907 3300005329 Bacteria 13723
7 Ga0068869_100018236 3300005334 Bacteria 4774
8 Ga0068869_100029695 3300005334 Bacteria 3833
9 Ga0070680_100000316 3300005336 Bacteria 32375
10 Ga0070680_100002959 3300005336 Bacteria 12630
11 Ga0070680_100030702 3300005336 Bacteria 4317
12 Ga0068868_100002276 3300005338 Bacteria 13264
13 Ga0068868_100014800 3300005338 Bacteria 5758
14 Ga0070691_10002800 3300005341 Bacteria 7783
15 Ga0070687_100000163 3300005343 Bacteria 23002
16 Ga0070671_100011901 3300005355 Bacteria 6997
17 Ga0070701_10002103 3300005438 Bacteria 7577
18 Ga0070705_100000386 3300005440 Bacteria 25740
19 Ga0070694_100000912 3300005444 Bacteria 16733
20 Ga0070678_100008880 3300005456 Bacteria 6049
21 Ga0070662_100002347 3300005457 Bacteria 11642
22 Ga0068867_100004079 3300005459 Bacteria 10277
23 Ga0068867_100015833 3300005459 Bacteria 5352
24 Ga0070679_100005570 3300005530 Bacteria 11672
25 Ga0070686_100001349 3300005544 Bacteria 13897
26 Ga0070696_100000493 3300005546 Bacteria 24824
27 Ga0070665_100000332 3300005548 Bacteria 72711
28 Ga0070704_100000693 3300005549 Bacteria 16352
29 Ga0068855_100006644 3300005563 Bacteria 14047
30 Ga0068855_100009333 3300005563 Bacteria 11848
31 Ga0068859_100000589 3300005617 Bacteria 36195
32 Ga0068866_10005640 3300005718 Bacteria 5181
33 Ga0068861_100001254 3300005719 Bacteria 15831
34 Ga0068863_100004944 3300005841 Bacteria 13140
35 Ga0068863_100015682 3300005841 Bacteria 7274
36 Ga0068863_100016389 3300005841 Bacteria 7108
37 Ga0068858_100000113 3300005842 Bacteria 84912
38 Ga0068858_100008009 3300005842 Bacteria 10180
39 Ga0068858_100013350 3300005842 Bacteria 7749
40 Ga0068860_100002193 3300005843 Bacteria 20543
41 Ga0068860_100013063 3300005843 Bacteria 8150
42 Ga0068862_100011461 3300005844 Bacteria 7317
43 Ga0075363_100015150 3300006048 Bacteria 3784
44 Ga0075366_10011046 3300006195 Bacteria 5085
45 Ga0075431_100022258 3300006847 Bacteria 6480
46 Ga0068865_100000086 3300006881 Bacteria 49762
47 Ga0097620_100000589 3300006931 Bacteria 36195
48 Ga0105240_10002907 3300009093 Bacteria 27030
49 Ga0105240_10004656 3300009093 Bacteria 20764
50 Ga0105240_10009281 3300009093 Bacteria 13948
51 Ga0105245_10000732 3300009098 Bacteria 29598
52 Ga0105247_10000663 3300009101 Bacteria 27269
53 Ga0105243_10000937 3300009148 Bacteria 27325
54 Ga0105243_10008588 3300009148 Bacteria 7839
55 Ga0105242_10001168 3300009176 Bacteria 20660
56 Ga0105248_10024065 3300009177 Bacteria 6768
57 Ga0105237_10001628 3300009545 Bacteria 29150
58 Ga0105237_10003789 3300009545 Bacteria 17782
59 Ga0105238_10017351 3300009551 Bacteria 7314
60 Ga0105239_10001684 3300010375 Bacteria 29148
61 Ga0105239_10006636 3300010375 Bacteria 13392
62 Ga0157370_10000298 3300013104 Bacteria 62940
63 Ga0157369_10005412 3300013105 Bacteria 14858
64 Ga0157369_10049981 3300013105 Bacteria 4530
65 Ga0182008_10004012 3300014497 Bacteria 8700
66 Ga0157379_10002414 3300014968 Bacteria 15615
67 Ga0182006_1001953 3300015261 Bacteria 11689
68 Ga0182007_10000410 3300015262 Bacteria 26353
69 Ga0183362_10001 3300015683 Bacteria 2046624
70 Ga0163161_10000117 3300017792 Bacteria 75699
71 Ga0209147_100643 3300025229 Bacteria 18513
72 Ga0209258_100058 3300025242 Bacteria 331567
73 Ga0207425_1000164 3300025245 Bacteria 55767
74 Ga0209148_1000071 3300025254 Bacteria 331551
75 Ga0209129_1000264 3300025258 Bacteria 52582
76 Ga0209565_1000110 3300025263 Bacteria 119879
77 Ga0209673_1000426 3300025273 Bacteria 73424
78 Ga0209130_1000483 3300025284 Bacteria 40974
79 Ga0209130_1000531 3300025284 Bacteria 38423
80 Ga0209130_1001675 3300025284 Bacteria 13507
81 Ga0209675_1000337 3300025291 Bacteria 40972
82 Ga0209676_1000005 3300025292 Bacteria 1076001
83 Ga0209676_1000152 3300025292 Bacteria 166700
84 Ga0209676_1004020 3300025292 Bacteria 8470
85 Ga0209025_1000116 3300025294 Bacteria 218293
86 Ga0209025_1001554 3300025294 Bacteria 29174
87 Ga0209564_1000099 3300025295 Bacteria 225256
88 Ga0209564_1000649 3300025295 Bacteria 52528
89 Ga0209758_1000107 3300025297 Bacteria 218293
90 Ga0209758_1008075 3300025297 Bacteria 6938
91 Ga0209050_1000007 3300025298 Bacteria 1187891
92 Ga0209050_1000210 3300025298 Bacteria 129834
93 Ga0209256_1000022 3300025299 Bacteria 481843
94 Ga0209256_1000087 3300025299 Bacteria 218290
95 Ga0207426_1000123 3300025302 Bacteria 218290
96 Ga0207426_1000260 3300025302 Bacteria 114246
97 Ga0209051_1000074 3300025303 Bacteria 208667
98 Ga0209257_1000011 3300025304 Bacteria 1112630
99 Ga0209257_1000072 3300025304 Bacteria 332791
100 Ga0207655_1002419 3300025728 Bacteria 15170
101 Ga0207682_10001192 3300025893 Bacteria 12043
102 Ga0207642_10001129 3300025899 Bacteria 8255
103 Ga0207710_10002610 3300025900 Bacteria 8310
104 Ga0207645_10003139 3300025907 Bacteria 12667
105 Ga0207645_10023728 3300025907 Bacteria 3983
106 Ga0207707_10000470 3300025912 Bacteria 41691
107 Ga0207707_10012031 3300025912 Bacteria 7522
108 Ga0207707_10030618 3300025912 Bacteria 4708
109 Ga0207695_10001758 3300025913 Bacteria 34365
110 Ga0207695_10016542 3300025913 Bacteria 8624
111 Ga0207671_10002945 3300025914 Bacteria 17546
112 Ga0207662_10001136 3300025918 Bacteria 12557
113 Ga0207652_10000795 3300025921 Bacteria 30149
114 Ga0207694_10019331 3300025924 Bacteria 5150
115 Ga0207650_10024084 3300025925 Bacteria 4324
116 Ga0207687_10002950 3300025927 Bacteria 11541
117 Ga0207644_10002752 3300025931 Bacteria 11326
118 Ga0207644_10009070 3300025931 Bacteria 6522
119 Ga0207686_10001239 3300025934 Bacteria 14762
120 Ga0207709_10003042 3300025935 Bacteria 10170
121 Ga0207689_10000217 3300025942 Bacteria 51018
122 Ga0207689_10023621 3300025942 Bacteria 5157
123 Ga0207667_10015180 3300025949 Bacteria 8757
124 Ga0207640_10002994 3300025981 Bacteria 9085
125 Ga0207658_10001004 3300025986 Bacteria 23154
126 Ga0207677_10000966 3300026023 Bacteria 15905
127 Ga0207703_10001034 3300026035 Bacteria 26715
128 Ga0207703_10001579 3300026035 Bacteria 20650
129 Ga0207703_10017573 3300026035 Bacteria 5584
130 Ga0207641_10000117 3300026088 Bacteria 117830
131 Ga0207641_10001124 3300026088 Bacteria 26893
132 Ga0207648_10000217 3300026089 Bacteria 62158
133 Ga0207648_10017664 3300026089 Bacteria 6479
134 Ga0207674_10006745 3300026116 Bacteria 13481
135 Ga0207675_100000310 3300026118 Bacteria 46701
136 Ga0207675_100050353 3300026118 Bacteria 3886
137 Ga0268266_10000191 3300028379 Bacteria 107606
138 Ga0268266_10001875 3300028379 Bacteria 23742
139 Ga0268264_10000183 3300028381 Bacteria 133803
140 Ga0268264_10003834 3300028381 Bacteria 12892
141 Ga0268264_10026399 3300028381 Bacteria 4745
142 Ga0307517_10001636 3300028786 Bacteria 37073
143 Ga0307515_10000399 3300028794 Bacteria 105068
144 Ga0307511_10000750 3300030521 Bacteria 34635
145 Ga0265327_10000223 3300031251 Bacteria 115759
146 Ga0265327_10001638 3300031251 Bacteria 26989
147 Ga0307513_10020203 3300031456 Bacteria 7902
148 Ga0307408_100000136 3300031548 Bacteria 81550
149 Ga0307508_10003415 3300031616 Bacteria 16068
150 Ga0307516_10002208 3300031730 Bacteria 26358
151 Ga0307516_10013479 3300031730 Bacteria 8703
152 Ga0307510_10004367 3300033180 Bacteria 16638
153 Ga0373936_0001778 3300035113 Bacteria 7924
154 Ga0373925_0003718 3300037068 Bacteria 11713
155 Ga0395898_0003759 3300037466 Bacteria 16813
156 Ga0395905_0002015 3300037471 Bacteria 23215
157 Ga0436365_1496300 3300039437 Bacteria 9488
158 Ga0439431_0001005 3300041997 Bacteria 6127
159 Ga0439432_001914 3300042006 Bacteria 7858
160 Ga0466966_0006708 3300044684 Bacteria 7626
161 Ga0466966_0026960 3300044684 Bacteria 3747
162 Ga0466961_0020969 3300044693 Bacteria 4204
163 Ga0466971_0002540 3300044719 Bacteria 7715
164 Ga0466968_0007482 3300044735 Bacteria 4154
165 Ga0466970_0005867 3300044765 Bacteria 6113
166 Ga0466959_0000018 3300045049 Bacteria 136580
167 Ga0466959_0005506 3300045049 Bacteria 8684
168 Ga0495616_0001283 3300046513 Bacteria 17649
169 Ga0495631_0000509 3300046518 Bacteria 25995
170 Ga0495637_0001326 3300046520 Bacteria 14842
171 Ga0495621_0001154 3300046539 Bacteria 6835
172 Ga0495656_0001724 3300046615 Bacteria 7155
173 Ga0495649_0006938 3300046694 Bacteria 6999
174 Ga0495686_0000655 3300047472 Bacteria 47295
175 Ga0495593_0003946 3300047673 Bacteria 8857
176 Ga0496100_0002256 3300048903 Bacteria 9744
177 Ga0496102_0000869 3300048905 Bacteria 28887
178 Ga0496103_0008499 3300048906 Bacteria 6100
179 Ga0496105_0000499 3300048908 Bacteria 25909
180 Ga0496109_0024253 3300048912 Bacteria 5391
181 Ga0496110_0028126 3300048913 Bacteria 4825
182 Ga0496112_0021379 3300048915 Bacteria 6153
183 Ga0496116_0013182 3300048919 Bacteria 6689
184 Ga0496118_0000045 3300048921 Bacteria 275165
185 Ga0496118_0004830 3300048921 Bacteria 15714
186 Ga0496118_0008484 3300048921 Bacteria 10609
187 Ga0496120_0000759 3300048923 Bacteria 46738
188 Ga0496121_0020467 3300048924 Bacteria 6546
189 Ga0496122_0000320 3300048925 Bacteria 105489
190 Ga0496123_0000258 3300048926 Bacteria 107501
191 Ga0496124_0000089 3300048927 Bacteria 192423
192 Ga0496124_0019023 3300048927 Bacteria 6410
193 Ga0496125_0000391 3300048928 Bacteria 81560
194 Ga0496125_0008453 3300048928 Bacteria 10772
195 Ga0501038_0035828 3300049574 Bacteria 4356
196 Ga0501039_0009765 3300049575 Bacteria 7311
197 Ga0501043_0001455 3300049579 Bacteria 20697
198 Ga0501046_0000110 3300049580 Bacteria 86752
199 Ga0501047_0000143 3300049581 Bacteria 87124
200 Ga0501048_0001436 3300049582 Bacteria 18064
201 Ga0501075_0000583 3300049591 Bacteria 22259
202 Ga0501198_000036 3300049649 Bacteria 53635
203 Ga0501222_000050 3300049662 Bacteria 43812
204 Ga0501079_0002728 3300049741 Bacteria 12870
205 Ga0501080_0014566 3300049742 Bacteria 7243
206 Ga0501083_0017996 3300049744 Bacteria 4928
207 Ga0501266_000120 3300049763 Bacteria 9712
208 Ga0501045_0003048 3300049824 Bacteria 11455
209 nmdc:mga0sz30_5814_c1 3300050516 Bacteria 4546
210 Ga0500643_003718 3300053087 Bacteria 7173
211 Ga0500651_0000117 3300053093 Bacteria 48907
212 Ga0500571_000041 3300053110 Bacteria 40237
213 Ga0500608_003046 3300053122 Bacteria 6211
214 Ga0500655_000573 3300053133 Bacteria 7387
215 Ga0500627_0000142 3300053158 Bacteria 21143
216 Ga0500637_0001785 3300053178 Bacteria 9293
217 Ga0501084_0000299 3300054114 Bacteria 37496
218 Ga0501082_0002601 3300060353 Bacteria 15777

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048928 Ga0496125_0008453 Ga0496125_0008453_7535_10738 1051
2 3300005336 Ga0070680_100000316 Ga0070680_1000003162 1057
3 3300005336 Ga0070680_100030702 Ga0070680_1000307021 1057
4 3300005338 Ga0068868_100002276 Ga0068868_1000022762 1057
5 3300005341 Ga0070691_10002800 Ga0070691_100028003 1057
6 3300005343 Ga0070687_100000163 Ga0070687_1000001638 1057
7 3300005438 Ga0070701_10002103 Ga0070701_100021033 1057
8 3300005440 Ga0070705_100000386 Ga0070705_1000003862 1057
9 3300005444 Ga0070694_100000912 Ga0070694_1000009125 1057
10 3300005459 Ga0068867_100004079 Ga0068867_1000040794 1057
11 3300005544 Ga0070686_100001349 Ga0070686_1000013493 1057
12 3300005549 Ga0070704_100000693 Ga0070704_1000006934 1057
13 3300005718 Ga0068866_10005640 Ga0068866_100056402 1057
14 3300005719 Ga0068861_100001254 Ga0068861_1000012545 1057
15 3300005842 Ga0068858_100013350 Ga0068858_1000133502 1057
16 3300005843 Ga0068860_100013063 Ga0068860_1000130633 1057
17 3300005844 Ga0068862_100011461 Ga0068862_1000114613 1057
18 3300006881 Ga0068865_100000086 Ga0068865_1000000863 1057
19 3300009098 Ga0105245_10000732 Ga0105245_1000073216 1057
20 3300009148 Ga0105243_10000937 Ga0105243_1000093710 1057
21 3300009176 Ga0105242_10001168 Ga0105242_100011683 1057
22 3300025899 Ga0207642_10001129 Ga0207642_100011294 1057
23 3300025918 Ga0207662_10001136 Ga0207662_100011363 1057
24 3300025927 Ga0207687_10002950 Ga0207687_100029505 1057
25 3300025934 Ga0207686_10001239 Ga0207686_100012399 1057
26 3300025942 Ga0207689_10000217 Ga0207689_1000021757 1057
27 3300025981 Ga0207640_10002994 Ga0207640_100029943 1057
28 3300026023 Ga0207677_10000966 Ga0207677_1000096612 1057
29 3300026035 Ga0207703_10017573 Ga0207703_100175732 1057
30 3300026089 Ga0207648_10000217 Ga0207648_100002175 1057
31 3300026118 Ga0207675_100000310 Ga0207675_10000031012 1057
32 3300028381 Ga0268264_10003834 Ga0268264_100038343 1057
33 3300035113 Ga0373936_0001778 Ga0373936_0001778_2275_5502 1062
34 3300053178 Ga0500637_0001785 Ga0500637_0001785_591_3926 1064
35 3300044735 Ga0466968_0007482 Ga0466968_0007482_276_3701 1069
36 3300048927 Ga0496124_0000089 Ga0496124_0000089_68525_71890 1075
37 3300005336 Ga0070680_100002959 Ga0070680_1000029592 1076
38 3300005563 Ga0068855_100006644 Ga0068855_1000066448 1076
39 3300009093 Ga0105240_10004656 Ga0105240_1000465611 1076
40 3300013104 Ga0157370_10000298 Ga0157370_1000029817 1076
41 3300025912 Ga0207707_10000470 Ga0207707_100004709 1076
42 3300025912 Ga0207707_10012031 Ga0207707_100120312 1076
43 3300025912 Ga0207707_10030618 Ga0207707_100306182 1076
44 3300025913 Ga0207695_10001758 Ga0207695_1000175811 1076
45 3300025921 Ga0207652_10000795 Ga0207652_100007958 1076
46 3300049649 Ga0501198_000036 Ga0501198_000036_37188_40520 1076
47 3300049662 Ga0501222_000050 Ga0501222_000050_37188_40520 1076
48 3300049763 Ga0501266_000120 Ga0501266_000120_844_4233 1076
49 3300005546 Ga0070696_100000493 Ga0070696_10000049326 1077
50 3300015683 Ga0183362_10001 Ga0183362_10001794 1077
51 3300025284 Ga0209130_1001675 Ga0209130_10016755 1081
52 3300025292 Ga0209676_1004020 Ga0209676_10040205 1081
53 3300005530 Ga0070679_100005570 Ga0070679_1000055703 1082
54 3300046539 Ga0495621_0001154 Ga0495621_0001154_1829_5158 1082
55 3300046615 Ga0495656_0001724 Ga0495656_0001724_3718_7047 1082
56 3300005329 Ga0070683_100002907 Ga0070683_1000029076 1084
57 3300005617 Ga0068859_100000589 Ga0068859_10000058917 1084
58 3300005841 Ga0068863_100004944 Ga0068863_1000049447 1084
59 3300005841 Ga0068863_100016389 Ga0068863_1000163892 1084
60 3300005842 Ga0068858_100000113 Ga0068858_10000011351 1084
61 3300005842 Ga0068858_100008009 Ga0068858_1000080096 1084
62 3300005843 Ga0068860_100002193 Ga0068860_1000021938 1084
63 3300006931 Ga0097620_100000589 Ga0097620_10000058917 1084
64 3300009093 Ga0105240_10002907 Ga0105240_100029079 1084
65 3300009101 Ga0105247_10000663 Ga0105247_1000066316 1084
66 3300009545 Ga0105237_10003789 Ga0105237_100037899 1084
67 3300014968 Ga0157379_10002414 Ga0157379_100024143 1084
68 3300025900 Ga0207710_10002610 Ga0207710_100026102 1084
69 3300025913 Ga0207695_10016542 Ga0207695_100165423 1084
70 3300025931 Ga0207644_10002752 Ga0207644_100027523 1084
71 3300025986 Ga0207658_10001004 Ga0207658_1000100410 1084
72 3300026035 Ga0207703_10001034 Ga0207703_1000103418 1084
73 3300026035 Ga0207703_10001579 Ga0207703_1000157914 1084
74 3300026088 Ga0207641_10000117 Ga0207641_100001172 1084
75 3300026088 Ga0207641_10001124 Ga0207641_1000112415 1084
76 3300028379 Ga0268266_10001875 Ga0268266_1000187513 1084
77 3300028381 Ga0268264_10000183 Ga0268264_1000018344 1084
78 3300028381 Ga0268264_10026399 Ga0268264_100263992 1084
79 3300030521 Ga0307511_10000750 Ga0307511_1000075019 1084
80 3300039437 Ga0436365_1496300 Ga0436365_1496300_4980_8276 1084
81 3300044684 Ga0466966_0006708 Ga0466966_0006708_4296_7592 1084
82 3300045049 Ga0466959_0005506 Ga0466959_0005506_4342_7638 1084
83 3300048915 Ga0496112_0021379 Ga0496112_0021379_488_3811 1084
84 3300048921 Ga0496118_0000045 Ga0496118_0000045_202443_205739 1084
85 3300048923 Ga0496120_0000759 Ga0496120_0000759_24623_27919 1084
86 3300048924 Ga0496121_0020467 Ga0496121_0020467_1894_5217 1084
87 3300048928 Ga0496125_0000391 Ga0496125_0000391_62902_66198 1084
88 3300005563 Ga0068855_100009333 Ga0068855_1000093335 1085
89 3300009093 Ga0105240_10009281 Ga0105240_100092814 1085
90 3300013105 Ga0157369_10049981 Ga0157369_100499812 1085
91 3300025949 Ga0207667_10015180 Ga0207667_100151802 1085
92 3300037466 Ga0395898_0003759 Ga0395898_0003759_12617_15916 1085
93 3300005548 Ga0070665_100000332 Ga0070665_10000033237 1086
94 3300028379 Ga0268266_10000191 Ga0268266_1000019158 1086
95 3300044684 Ga0466966_0026960 Ga0466966_0026960_174_3482 1087
96 3300044693 Ga0466961_0020969 Ga0466961_0020969_305_3613 1087
97 3300044719 Ga0466971_0002540 Ga0466971_0002540_4010_7318 1087
98 3300044765 Ga0466970_0005867 Ga0466970_0005867_636_3944 1087
99 3300047472 Ga0495686_0000655 Ga0495686_0000655_26055_29396 1088
100 3300037068 Ga0373925_0003718 Ga0373925_0003718_134_3472 1090
101 3300037471 Ga0395905_0002015 Ga0395905_0002015_8502_11816 1090
102 3300031548 Ga0307408_100000136 Ga0307408_10000013632 1091
103 iso_pu_bacteria 2738543013 2739252071 1092
104 iso_pu_bacteria 2881101125 2881103002 1092
105 iso_pu_bacteria 2928115317 2928119789 1092
106 3300031730 Ga0307516_10002208 Ga0307516_100022082 1093
107 iso_pu_bacteria 2643221628 2644162520 1093
108 3300031730 Ga0307516_10013479 Ga0307516_100134795 1094
109 iso_pu_bacteria 2885192300 2885197194 1094
110 3300005328 Ga0070676_10003160 Ga0070676_100031602 1095
111 3300005334 Ga0068869_100018236 Ga0068869_1000182363 1095
112 3300005334 Ga0068869_100029695 Ga0068869_1000296952 1095
113 3300005355 Ga0070671_100011901 Ga0070671_1000119013 1095
114 3300005456 Ga0070678_100008880 Ga0070678_1000088803 1095
115 3300005459 Ga0068867_100015833 Ga0068867_1000158331 1095
116 3300005841 Ga0068863_100015682 Ga0068863_1000156823 1095
117 3300006048 Ga0075363_100015150 Ga0075363_1000151502 1095
118 3300006847 Ga0075431_100022258 Ga0075431_1000222582 1095
119 3300009177 Ga0105248_10024065 Ga0105248_100240653 1095
120 3300009545 Ga0105237_10001628 Ga0105237_100016284 1095
121 3300009551 Ga0105238_10017351 Ga0105238_100173514 1095
122 3300010375 Ga0105239_10001684 Ga0105239_100016844 1095
123 3300010375 Ga0105239_10006636 Ga0105239_100066364 1095
124 3300025893 Ga0207682_10001192 Ga0207682_100011923 1095
125 3300025907 Ga0207645_10003139 Ga0207645_100031394 1095
126 3300025907 Ga0207645_10023728 Ga0207645_100237282 1095
127 3300025914 Ga0207671_10002945 Ga0207671_1000294512 1095
128 3300025924 Ga0207694_10019331 Ga0207694_100193312 1095
129 3300025925 Ga0207650_10024084 Ga0207650_100240843 1095
130 3300025931 Ga0207644_10009070 Ga0207644_100090703 1095
131 3300025942 Ga0207689_10023621 Ga0207689_100236212 1095
132 3300026089 Ga0207648_10017664 Ga0207648_100176642 1095
133 3300026116 Ga0207674_10006745 Ga0207674_100067453 1095
134 3300026118 Ga0207675_100050353 Ga0207675_1000503532 1095
135 3300046694 Ga0495649_0006938 Ga0495649_0006938_2399_5770 1095
136 3300049574 Ga0501038_0035828 Ga0501038_0035828_192_3536 1095
137 3300049575 Ga0501039_0009765 Ga0501039_0009765_1252_4596 1095
138 3300049591 Ga0501075_0000583 Ga0501075_0000583_2962_6306 1095
139 3300049741 Ga0501079_0002728 Ga0501079_0002728_2356_5700 1095
140 3300049742 Ga0501080_0014566 Ga0501080_0014566_3137_6481 1095
141 3300049824 Ga0501045_0003048 Ga0501045_0003048_1418_4762 1095
142 3300054114 Ga0501084_0000299 Ga0501084_0000299_6649_9993 1095
143 3300060353 Ga0501082_0002601 Ga0501082_0002601_4610_7954 1095
144 iso_pu_bacteria 2738541277 2738718904 1095
145 iso_pu_bacteria 2738541307 2738878857 1095
146 iso_pu_bacteria 2738543019 2739280922 1095
147 iso_pu_bacteria 2842677519 2842678440 1095
148 iso_pu_bacteria 2904449895 2904455006 1095
149 iso_pu_bacteria 2904456579 2904457368 1095
150 iso_pu_bacteria 2904541872 2904545864 1095
151 iso_pu_bacteria 2919462493 2919465134 1095
152 iso_pu_bacteria 2929160207 2929161050 1095
153 iso_pu_bacteria 2929520902 2929525202 1095
154 iso_pu_bacteria 2945945610 2945948566 1095
155 iso_pu_bacteria 2945972063 2945977835 1095
156 iso_pu_bacteria 2954767861 2954772790 1095
157 3300028786 Ga0307517_10001636 Ga0307517_1000163612 1096
158 3300031251 Ga0265327_10000223 Ga0265327_1000022342 1096
159 3300031251 Ga0265327_10001638 Ga0265327_100016385 1096
160 3300031456 Ga0307513_10020203 Ga0307513_100202033 1096
161 3300031616 Ga0307508_10003415 Ga0307508_100034153 1096
162 3300033180 Ga0307510_10004367 Ga0307510_100043672 1096
163 3300041997 Ga0439431_0001005 Ga0439431_0001005_252_3593 1096
164 3300042006 Ga0439432_001914 Ga0439432_001914_1288_4629 1096
165 3300045049 Ga0466959_0000018 Ga0466959_0000018_40327_43695 1096
166 3300048906 Ga0496103_0008499 Ga0496103_0008499_181_4281 1096
167 3300050516 nmdc:mga0sz30_5814_c1 nmdc:mga0sz30_5814_c1_980_4333 1096
168 iso_pu_bacteria 2513020051 2513229009 1096
169 iso_pu_bacteria 2599185214 2599626043 1096
170 iso_pu_bacteria 2599185226 2599674875 1096
171 iso_pu_bacteria 2599185227 2599683769 1096
172 iso_pu_bacteria 2599185229 2599695628 1096
173 iso_pu_bacteria 2643221658 2644329071 1096
174 iso_pu_bacteria 2643221672 2644401837 1096
175 iso_pu_bacteria 2643221683 2644468816 1096
176 iso_pu_bacteria 2818991446 2819597439 1096
177 iso_pu_bacteria 2831265667 2831266536 1096
178 iso_pu_bacteria 2838054893 2838057342 1096
179 iso_pu_bacteria 2899924645 2899924949 1096
180 iso_pu_bacteria 2928037797 2928038927 1096
181 iso_pu_bacteria 2928044640 2928045468 1096
182 iso_pu_bacteria 2928051484 2928058365 1096
183 iso_pu_bacteria 2928064002 2928064054 1096
184 iso_pu_bacteria 2928070936 2928076184 1096
185 iso_pu_bacteria 2928084124 2928089108 1096
186 iso_pu_bacteria 2945909444 2945912098 1096
187 iso_pu_bacteria 2945984333 2945985617 1096
188 3300005338 Ga0068868_100014800 Ga0068868_1000148003 1097
189 3300006195 Ga0075366_10011046 Ga0075366_100110462 1097
190 3300014497 Ga0182008_10004012 Ga0182008_100040122 1097
191 3300048903 Ga0496100_0002256 Ga0496100_0002256_1628_4957 1097
192 3300048905 Ga0496102_0000869 Ga0496102_0000869_4759_8088 1097
193 3300048908 Ga0496105_0000499 Ga0496105_0000499_13118_16447 1097
194 3300048912 Ga0496109_0024253 Ga0496109_0024253_319_3648 1097
195 3300048913 Ga0496110_0028126 Ga0496110_0028126_611_3940 1097
196 3300048925 Ga0496122_0000320 Ga0496122_0000320_43762_47133 1097
197 3300048926 Ga0496123_0000258 Ga0496123_0000258_64681_68052 1097
198 3300049579 Ga0501043_0001455 Ga0501043_0001455_2978_6361 1097
199 3300049580 Ga0501046_0000110 Ga0501046_0000110_69033_72416 1097
200 3300049581 Ga0501047_0000143 Ga0501047_0000143_69405_72788 1097
201 3300049582 Ga0501048_0001436 Ga0501048_0001436_2952_6335 1097
202 iso_pu_bacteria 2842733646 2842734564 1097
203 iso_pu_bacteria 2842747753 2842749203 1097
204 3300048919 Ga0496116_0013182 Ga0496116_0013182_1779_5120 1099
205 3300049744 Ga0501083_0017996 Ga0501083_0017996_1074_4415 1099
206 3300003761 Ga0055535_1000191 Ga0055535_100019122 1100
207 3300003762 Ga0055542_1000021 Ga0055542_100002186 1100
208 3300003791 Ga0055530_10000380 Ga0055530_1000038015 1100
209 3300003792 Ga0055540_1000526 Ga0055540_100052613 1100
210 3300005457 Ga0070662_100002347 Ga0070662_1000023473 1100
211 3300009148 Ga0105243_10008588 Ga0105243_100085882 1100
212 3300013105 Ga0157369_10005412 Ga0157369_100054122 1100
213 3300015261 Ga0182006_1001953 Ga0182006_10019534 1100
214 3300015262 Ga0182007_10000410 Ga0182007_100004108 1100
215 3300017792 Ga0163161_10000117 Ga0163161_1000011711 1100
216 3300025229 Ga0209147_100643 Ga0209147_1006435 1100
217 3300025242 Ga0209258_100058 Ga0209258_10005887 1100
218 3300025245 Ga0207425_1000164 Ga0207425_100016415 1100
219 3300025254 Ga0209148_1000071 Ga0209148_100007187 1100
220 3300025258 Ga0209129_1000264 Ga0209129_100026428 1100
221 3300025263 Ga0209565_1000110 Ga0209565_100011098 1100
222 3300025273 Ga0209673_1000426 Ga0209673_100042648 1100
223 3300025284 Ga0209130_1000483 Ga0209130_100048317 1100
224 3300025284 Ga0209130_1000531 Ga0209130_100053124 1100
225 3300025291 Ga0209675_1000337 Ga0209675_100033717 1100
226 3300025292 Ga0209676_1000005 Ga0209676_1000005968 1100
227 3300025292 Ga0209676_1000152 Ga0209676_100015258 1100
228 3300025294 Ga0209025_1000116 Ga0209025_1000116194 1100
229 3300025294 Ga0209025_1001554 Ga0209025_100155413 1100
230 3300025295 Ga0209564_1000099 Ga0209564_100009918 1100
231 3300025295 Ga0209564_1000649 Ga0209564_100064928 1100
232 3300025297 Ga0209758_1000107 Ga0209758_1000107194 1100
233 3300025297 Ga0209758_1008075 Ga0209758_10080753 1100
234 3300025298 Ga0209050_1000007 Ga0209050_1000007129 1100
235 3300025298 Ga0209050_1000210 Ga0209050_1000210108 1100
236 3300025299 Ga0209256_1000022 Ga0209256_1000022308 1100
237 3300025299 Ga0209256_1000087 Ga0209256_1000087194 1100
238 3300025302 Ga0207426_1000123 Ga0207426_1000123194 1100
239 3300025302 Ga0207426_1000260 Ga0207426_100026065 1100
240 3300025303 Ga0209051_1000074 Ga0209051_1000074107 1100
241 3300025304 Ga0209257_1000011 Ga0209257_1000011942 1100
242 3300025304 Ga0209257_1000072 Ga0209257_1000072108 1100
243 3300025728 Ga0207655_1002419 Ga0207655_10024195 1100
244 3300025935 Ga0207709_10003042 Ga0207709_100030422 1100
245 3300028794 Ga0307515_10000399 Ga0307515_1000039948 1100
246 3300046513 Ga0495616_0001283 Ga0495616_0001283_7062_10394 1100
247 3300046518 Ga0495631_0000509 Ga0495631_0000509_2904_6236 1100
248 3300046520 Ga0495637_0001326 Ga0495637_0001326_4462_7806 1100
249 3300047673 Ga0495593_0003946 Ga0495593_0003946_3017_6334 1100
250 3300048921 Ga0496118_0004830 Ga0496118_0004830_1905_5207 1100
251 3300048921 Ga0496118_0008484 Ga0496118_0008484_3311_6613 1100
252 3300048927 Ga0496124_0019023 Ga0496124_0019023_1548_4892 1100
253 3300053087 Ga0500643_003718 Ga0500643_003718_1538_4855 1100
254 3300053093 Ga0500651_0000117 Ga0500651_0000117_11190_14507 1100
255 3300053110 Ga0500571_000041 Ga0500571_000041_17675_20992 1100
256 3300053122 Ga0500608_003046 Ga0500608_003046_1332_4664 1100
257 3300053133 Ga0500655_000573 Ga0500655_000573_876_4193 1100
258 3300053158 Ga0500627_0000142 Ga0500627_0000142_17448_20792 1100

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16657

Malt_amylase_C

Maltogenic Amylase, C-terminal domain

478

555

0.99

PF05552

MS_channel_1st_1

Mechanosensitive ion channel, conserved TM helix

1085

1132

0.98

PF05552

MS_channel_1st_1

Mechanosensitive ion channel, conserved TM helix

1180

1229

0.89

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

46

403

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u94-assembly1.cif.gz_A structure of mycobacterial maltokinase, the missing link in the essential glge-pathway 0.8568 613 1095
5jy7-assembly2.cif.gz_N complex of mycobacterium smegmatis trehalose synthase with maltokinase 0.8373 707 1092
5jy7-assembly1.cif.gz_I complex of mycobacterium smegmatis trehalose synthase with maltokinase 0.8346 618 1092
5jy7-assembly2.cif.gz_N complex of mycobacterium smegmatis trehalose synthase with maltokinase 0.8306 707 1092
4u94-assembly1.cif.gz_A structure of mycobacterial maltokinase, the missing link in the essential glge-pathway 0.83 613 1095
ID Description Score Start End Superfamily
4tvuA03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9547 478 559 2.60.40.1180
4lxfB03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9372 478 559 2.60.40.1180
4tvuA03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9222 478 559 2.60.40.1180
af_P0CW41_2_118_3.30.750.90 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9169 16 126 3.30.750.90
af_P9WQ19_501_601_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9025 478 565 2.60.40.1180
ID Description Score Start End GO Terms
AF-A0A7W1U851-F1-model_v4 Glycosyl hydrolase family 13 catalytic domain-containing protein 0.9777 20 133 GO:0005975
AF-A0A838PLX5-F1-model_v4 Alpha-amylase 0.9694 23 130 GO:0004556
GO:0009313
AF-A0A0N0SLU8-F1-model_v4 Glycosyl hydrolase family 13 catalytic domain-containing protein 0.9691 20 112 GO:0005975
AF-A0A317Z995-F1-model_v4 Glucohydrolase 0.9668 23 128 GO:0004556
GO:0009313
AF-A0A0L8NCQ7-F1-model_v4 deleted 0.9652 487 563

Feature Viewer

pLDDT pTM Quality
75.64 0.54 Medium
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Predicted Structure (AlphaFold2)

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