F368062

General Info

Members Datasets Scaffolds Average Seq Length
258 157 506 977

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10046477|Ga0105248_100464772
Length 1087
Sequence VRRGLQRPEAHARSAKAAPACVMSAMRRCQRLRDFGNHCCKNKPREPIHIFLMFDQPGRLTFGTGDYPRTGENPMRHTLLREAIRGALVTPGFARAPSSPTRMTALAALGLLAVPAFAQDAPQDQNSNQQLETITVTGSNIRRVDIETSNPVITIDRAAIQRTGKLTLGDLVQQLPAVTGPNINPQINNGGGSGASSIGLRGLGSPRTLVLINGHRYLSGDPNAIPANMIERIEVLTDGASSVYGSDAVAGVVNFILRSDYQGAEFSVNYGISDHDDGESKGYQFTFGQSSDKGSIMAGISYNKTGQVLAGHRDFSKNSVSLYGTNGAGPSGGIPIAGHTGGSTSSPFGHVQIPDAFADLFPDCNTGFLTRLAGHSGQNIATDYRCYVNNGTATTPSDKYNYATVNLIMTPQERTGLFLNGNYKLTDTIEVYASVMHNKTSSAFQLAPSVYGSPYGGIISADSYYNPFGVEFSRTELDYRSRFAVLGNRRVSFGTNTDQVSTGFKGSFSVWQDQQWNWEVGMDYGHNTVQTTTYGLPNLNILNQATGPSFYDPDSGTVVCGQPGAIIKNCTPINIFDLEDPNTLAVLRQAASAASSGGFTQEKVWRADANGGIFELPAGTVQLAVGASYRKEYSHGNVDTSLLINPATGNCVLGSQCASPLQGGYNVKDYYAELFVPILKDMPFVHALNLTVGDRYSKYNNFGSTNNTKIALEWRPIEDLLLRGTVSEVFRAPTVLNLFGAAINDAPRLSHDPCDGYTGNPPNPACTNVPTDGSFRNHSVSQGVQINAVASGSEFAGFPLGPELGKSFDWGVVYDPHFIDGLSVSADYWRLYLNDIITNVGAQSVIDLCAAGQLIFCNMFTRTASGVNQGQILTMLEPTANLGRVDVKGVDVNFNYRLPEFSFGRFNIQFNATYLEKYDVSTAPGTPANTVYHYAGHFLTFGSSQAAACATGVGSGGVCLYPRWRAQSAVNWQWNNFDASWRMRYIGRFRMGSPSPSQDVFPAGTCYYGDYCSIHGLFYDFGATVYHDISFGYNLEAWNTRIDVGINNVGDKQPPFLFANNSINANTDPSDFDLLGRYYWTSVTVKF

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
55 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
56 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
57 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
58 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
61 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
64 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
65 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
104 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
105 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
106 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
107 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
108 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
109 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
146 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
149 2818991457 Xanthomonas translucens 569 Isolate Unclassified
150 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
151 2919085039 Luteibacter sp. 1214 Isolate Unclassified
152 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
153 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
154 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere
155 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
156 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
157 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.74
Metatranscriptomes 0.39
Isolates 3.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.91
Nodule 0
Rhizoplane 2.71
Rhizosphere 82.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10046477 3300009177 Bacteria 4865
2 SwRhRL2b_contig_2054245 2162886007 Bacteria 20432
3 JGI24738J21930_10005169 3300002075 Bacteria 3153
4 JGI25162J39368_1001529 3300002737 Bacteria 11940
5 JGI25157J39369_1001958 3300002741 Bacteria 6128
6 JGI25164J39214_1000177 3300002772 Bacteria 59121
7 JGI25165J46597_1000311 3300003214 Bacteria 59121
8 Ga0055535_1001303 3300003761 Bacteria 13354
9 Ga0055542_1001309 3300003762 Bacteria 13194
10 Ga0055529_1000469 3300003763 Bacteria 38928
11 Ga0058692_1000006 3300003856 Bacteria 398109
12 Ga0065704_10070423 3300005289 Bacteria 25546
13 Ga0070658_10004340 3300005327 Bacteria 11573
14 Ga0070658_10026735 3300005327 Bacteria 4632
15 Ga0070666_10001033 3300005335 Bacteria 17050
16 Ga0070666_10016395 3300005335 Bacteria 4740
17 Ga0070661_100002132 3300005344 Bacteria 13636
18 Ga0070692_10001703 3300005345 Bacteria 8167
19 Ga0070668_100002628 3300005347 Bacteria 13198
20 Ga0070671_100023271 3300005355 Bacteria 5068
21 Ga0070659_100014339 3300005366 Bacteria 5922
22 Ga0070667_100004927 3300005367 Bacteria 11188
23 Ga0070667_100026131 3300005367 Bacteria 4855
24 Ga0070667_100042789 3300005367 Bacteria 3800
25 Ga0068867_100011155 3300005459 Bacteria 6339
26 Ga0070684_100007583 3300005535 Bacteria 8451
27 Ga0068853_100004050 3300005539 Bacteria 11282
28 Ga0068853_100024066 3300005539 Bacteria 5104
29 Ga0068853_100048890 3300005539 Bacteria 3633
30 Ga0070696_100016135 3300005546 Bacteria 5024
31 Ga0070693_100006890 3300005547 Bacteria 5524
32 Ga0070693_100010061 3300005547 Bacteria 4722
33 Ga0070665_100000100 3300005548 Bacteria 160186
34 Ga0070665_100000400 3300005548 Bacteria 63418
35 Ga0068855_100012558 3300005563 Bacteria 10225
36 Ga0068855_100023245 3300005563 Bacteria 7425
37 Ga0070664_100015228 3300005564 Bacteria 6285
38 Ga0068854_100020839 3300005578 Bacteria 4441
39 Ga0068854_100027989 3300005578 Bacteria 3890
40 Ga0068856_100003365 3300005614 Bacteria 16202
41 Ga0068856_100018795 3300005614 Bacteria 6702
42 Ga0068856_100021331 3300005614 Bacteria 6295
43 Ga0068856_100039422 3300005614 Bacteria 4638
44 Ga0068856_100066953 3300005614 Bacteria 3549
45 Ga0068861_100018923 3300005719 Bacteria 4911
46 Ga0068863_100004610 3300005841 Bacteria 13577
47 Ga0068863_100021949 3300005841 Bacteria 6091
48 Ga0068863_100026491 3300005841 Bacteria 5530
49 Ga0068863_100044299 3300005841 Bacteria 4224
50 Ga0068860_100003629 3300005843 Bacteria 15866
51 Ga0068860_100004492 3300005843 Bacteria 14229
52 Ga0068860_100018373 3300005843 Bacteria 6802
53 Ga0068862_100000262 3300005844 Bacteria 58677
54 Ga0068862_100005447 3300005844 Bacteria 10635
55 Ga0068862_100026884 3300005844 Bacteria 4840
56 Ga0081540_1000846 3300005983 Bacteria 27869
57 Ga0081540_1007502 3300005983 Bacteria 7765
58 Ga0081540_1009542 3300005983 Bacteria 6677
59 Ga0097621_100005895 3300006237 Bacteria 8659
60 Ga0097621_100014163 3300006237 Bacteria 5963
61 Ga0097621_100016465 3300006237 Bacteria 5591
62 Ga0068871_100006632 3300006358 Bacteria 8212
63 Ga0097620_100000151 3300006931 Bacteria 66183
64 Ga0105251_10000048 3300009011 Bacteria 110218
65 Ga0105247_10010429 3300009101 Bacteria 5617
66 Ga0105241_10002695 3300009174 Bacteria 13307
67 Ga0105248_10038099 3300009177 Bacteria 5380
68 Ga0105248_10061261 3300009177 Bacteria 4224
69 Ga0105238_10006539 3300009551 Bacteria 11608
70 Ga0105239_10006919 3300010375 Bacteria 13079
71 Ga0105239_10011927 3300010375 Bacteria 9692
72 Ga0105239_10036741 3300010375 Bacteria 5374
73 Ga0105239_10053392 3300010375 Bacteria 4433
74 Ga0157371_10006020 3300013102 Bacteria 10102
75 Ga0157370_10002879 3300013104 Bacteria 20506
76 Ga0157370_10009898 3300013104 Bacteria 10102
77 Ga0157369_10009199 3300013105 Bacteria 11303
78 Ga0157378_10000031 3300013297 Bacteria 124224
79 Ga0163162_10021127 3300013306 Bacteria 6403
80 Ga0157375_10006481 3300013308 Bacteria 10197
81 Ga0157375_10010591 3300013308 Bacteria 8119
82 Ga0157375_10024567 3300013308 Bacteria 5579
83 Ga0163163_10003206 3300014325 Bacteria 13860
84 Ga0163163_10003715 3300014325 Bacteria 12999
85 Ga0182008_10002905 3300014497 Bacteria 10606
86 Ga0157379_10000174 3300014968 Bacteria 48627
87 Ga0157379_10012342 3300014968 Bacteria 7463
88 Ga0157376_10000254 3300014969 Bacteria 36962
89 Ga0157376_10000441 3300014969 Bacteria 26766
90 Ga0157376_10000871 3300014969 Bacteria 19796
91 Ga0157376_10002346 3300014969 Bacteria 12774
92 Ga0157376_10021895 3300014969 Bacteria 4971
93 Ga0182006_1002385 3300015261 Bacteria 10297
94 Ga0182006_1002433 3300015261 Bacteria 10173
95 Ga0182007_10002006 3300015262 Bacteria 10488
96 Ga0182005_1000004 3300015265 Bacteria 609645
97 Ga0182005_1001709 3300015265 Bacteria 8485
98 Ga0206355_1084406 3300020076 Bacteria 3162
99 Ga0209672_100098 3300025228 Bacteria 110776
100 Ga0207427_100095 3300025231 Bacteria 125731
101 Ga0209437_100209 3300025233 Bacteria 110324
102 Ga0209437_100505 3300025233 Bacteria 27770
103 Ga0209258_100055 3300025242 Bacteria 337291
104 Ga0209148_1000058 3300025254 Bacteria 357482
105 Ga0209759_1000486 3300025256 Bacteria 43787
106 Ga0209233_1000197 3300025261 Bacteria 125745
107 Ga0209455_1000018 3300025272 Bacteria 718034
108 Ga0207656_10006781 3300025321 Bacteria 4139
109 Ga0207713_1001018 3300025735 Bacteria 24421
110 Ga0207680_10000960 3300025903 Bacteria 13595
111 Ga0207647_10000438 3300025904 Bacteria 34051
112 Ga0207647_10000581 3300025904 Bacteria 28436
113 Ga0207645_10009126 3300025907 Bacteria 6878
114 Ga0207705_10001864 3300025909 Bacteria 16554
115 Ga0207705_10002843 3300025909 Bacteria 13241
116 Ga0207654_10000571 3300025911 Bacteria 20871
117 Ga0207707_10020744 3300025912 Bacteria 5739
118 Ga0207707_10050496 3300025912 Bacteria 3622
119 Ga0207695_10000330 3300025913 Bacteria 113210
120 Ga0207660_10001635 3300025917 Bacteria 15027
121 Ga0207657_10003853 3300025919 Bacteria 15931
122 Ga0207657_10048908 3300025919 Bacteria 3689
123 Ga0207649_10001742 3300025920 Bacteria 12483
124 Ga0207652_10003972 3300025921 Bacteria 12084
125 Ga0207694_10004543 3300025924 Bacteria 10822
126 Ga0207694_10020389 3300025924 Bacteria 5016
127 Ga0207694_10040028 3300025924 Bacteria 3608
128 Ga0207690_10008943 3300025932 Bacteria 5944
129 Ga0207706_10015892 3300025933 Bacteria 6804
130 Ga0207706_10017844 3300025933 Bacteria 6391
131 Ga0207704_10016478 3300025938 Bacteria 3799
132 Ga0207691_10013627 3300025940 Bacteria 7770
133 Ga0207691_10051117 3300025940 Bacteria 3780
134 Ga0207667_10005880 3300025949 Bacteria 14941
135 Ga0207667_10015449 3300025949 Bacteria 8671
136 Ga0207668_10005288 3300025972 Bacteria 7597
137 Ga0207640_10006295 3300025981 Bacteria 6507
138 Ga0207639_10005682 3300026041 Bacteria 8440
139 Ga0207702_10003546 3300026078 Bacteria 14206
140 Ga0207702_10008878 3300026078 Bacteria 8473
141 Ga0207702_10010511 3300026078 Bacteria 7741
142 Ga0207702_10013832 3300026078 Bacteria 6701
143 Ga0207641_10011580 3300026088 Bacteria 7239
144 Ga0207641_10036020 3300026088 Bacteria 4128
145 Ga0207641_10043319 3300026088 Bacteria 3779
146 Ga0207674_10001158 3300026116 Bacteria 34191
147 Ga0207674_10050674 3300026116 Bacteria 4240
148 Ga0207683_10003291 3300026121 Bacteria 14087
149 Ga0207683_10031979 3300026121 Bacteria 4569
150 Ga0207698_10037644 3300026142 Bacteria 3565
151 Ga0209371_1000016 3300027312 Bacteria 646301
152 Ga0268266_10000001 3300028379 Bacteria 4040580
153 Ga0268266_10000017 3300028379 Bacteria 607272
154 Ga0268266_10016730 3300028379 Bacteria 6270
155 Ga0268266_10044404 3300028379 Bacteria 3799
156 Ga0268265_10000131 3300028380 Bacteria 95615
157 Ga0268265_10000196 3300028380 Bacteria 70684
158 Ga0268265_10000372 3300028380 Bacteria 48383
159 Ga0268265_10000554 3300028380 Bacteria 38099
160 Ga0268264_10003238 3300028381 Bacteria 14094
161 Ga0268264_10007508 3300028381 Bacteria 9097
162 Ga0268264_10009148 3300028381 Bacteria 8211
163 Ga0268264_10014853 3300028381 Bacteria 6396
164 Ga0268264_10023408 3300028381 Bacteria 5040
165 Ga0268264_10039688 3300028381 Bacteria 3890
166 Ga0268256_1000015 3300030500 Bacteria 646300
167 Ga0307516_10023266 3300031730 Bacteria 6355
168 Ga0307412_10037806 3300031911 Bacteria 3103
169 Ga0395899_0000081 3300037312 Bacteria 169527
170 Ga0395900_0000024 3300037418 Bacteria 323480
171 Ga0395900_0026712 3300037418 Bacteria 5910
172 Ga0395898_0000044 3300037466 Bacteria 298164
173 Ga0439436_0000034 3300041404 Bacteria 43546
174 Ga0451797_1338386 3300041453 Bacteria 3527
175 Ga0451800_0211862 3300041459 Bacteria 7857
176 Ga0451806_617527 3300041462 Bacteria 7457
177 Ga0451804_1069471 3300041463 Bacteria 4135
178 Ga0451807_0413073 3300041486 Bacteria 3920
179 Ga0466969_0000306 3300044656 Bacteria 27010
180 Ga0466972_0000253 3300044658 Bacteria 35854
181 Ga0466966_0003883 3300044684 Bacteria 9873
182 Ga0466961_0000222 3300044693 Bacteria 38729
183 Ga0466961_0002263 3300044693 Bacteria 11942
184 Ga0466970_0000329 3300044765 Bacteria 23124
185 Ga0466957_0004370 3300044842 Bacteria 7861
186 Ga0466959_0000362 3300045049 Bacteria 26889
187 Ga0466959_0039599 3300045049 Bacteria 3483
188 Ga0495638_0000060 3300046460 Bacteria 190580
189 Ga0495610_0000902 3300046512 Bacteria 27613
190 Ga0495633_0002621 3300046558 Bacteria 12573
191 Ga0496114_0053619 3300048917 Bacteria 3361
192 Ga0496115_0000058 3300048918 Bacteria 103044
193 Ga0496117_0002197 3300048920 Bacteria 25379
194 Ga0496118_0001504 3300048921 Bacteria 34752
195 Ga0496119_0000951 3300048922 Bacteria 37280
196 Ga0496120_0000276 3300048923 Bacteria 86130
197 Ga0496122_0001634 3300048925 Bacteria 34943
198 Ga0496123_0000374 3300048926 Bacteria 83982
199 Ga0496124_0000815 3300048927 Bacteria 50713
200 Ga0496126_0000558 3300048929 Bacteria 71676
201 Ga0501031_0002695 3300049568 Bacteria 11299
202 Ga0501032_0003059 3300049569 Bacteria 12940
203 Ga0501032_0014235 3300049569 Bacteria 5633
204 Ga0501032_0021080 3300049569 Bacteria 4532
205 Ga0501033_0023452 3300049570 Bacteria 4653
206 Ga0501034_0001111 3300049571 Bacteria 37708
207 Ga0501034_0003304 3300049571 Bacteria 18416
208 Ga0501034_0019164 3300049571 Bacteria 7005
209 Ga0501034_0055934 3300049571 Bacteria 3970
210 Ga0501038_0012109 3300049574 Bacteria 7878
211 Ga0501039_0002932 3300049575 Bacteria 12769
212 Ga0501039_0008474 3300049575 Bacteria 7838
213 Ga0501043_0003705 3300049579 Bacteria 12556
214 Ga0501046_0000908 3300049580 Bacteria 28913
215 Ga0501046_0009135 3300049580 Bacteria 8587
216 Ga0501046_0009227 3300049580 Bacteria 8539
217 Ga0501047_0001208 3300049581 Bacteria 25623
218 Ga0501047_0002412 3300049581 Bacteria 17859
219 Ga0501047_0030769 3300049581 Bacteria 5173
220 Ga0501047_0078167 3300049581 Bacteria 3182
221 Ga0501073_0004834 3300049589 Bacteria 10112
222 Ga0501073_0015612 3300049589 Bacteria 5510
223 Ga0501080_0000776 3300049742 Bacteria 25950
224 Ga0501080_0028095 3300049742 Bacteria 5230
225 Ga0501035_0003547 3300049822 Bacteria 14901
226 Ga0501035_0004820 3300049822 Bacteria 12788
227 Ga0501035_0018380 3300049822 Bacteria 6441
228 Ga0501044_0004661 3300049823 Bacteria 15344
229 Ga0501044_0013450 3300049823 Bacteria 8851
230 Ga0501044_0023567 3300049823 Bacteria 6546
231 Ga0501044_0045771 3300049823 Bacteria 4532
232 nmdc:mga0n895_36723_c1 3300050512 Bacteria 4733
233 Ga0500610_0000087 3300053079 Bacteria 27865
234 Ga0500610_0000463 3300053079 Bacteria 12490
235 Ga0500651_0000154 3300053093 Bacteria 43979
236 Ga0500651_0008537 3300053093 Bacteria 6037
237 Ga0500568_0000674 3300053139 Bacteria 24638
238 Ga0500568_0000874 3300053139 Bacteria 21141
239 Ga0500568_0000950 3300053139 Bacteria 19939
240 Ga0500568_0001858 3300053139 Bacteria 13004
241 Ga0500634_0000548 3300053161 Bacteria 12353
242 Ga0501082_0001099 3300060353 Bacteria 23918
243 Ga0501082_0039285 3300060353 Bacteria 4083
244 2748016432 2747842501 Bacteria 5293829
245 2819660006 2818991457 Bacteria 5323295
246 2852685178 2852684882 Bacteria 5463342
247 2919085478 2919085039 Bacteria 4532964
248 2919130718 2919130084 Bacteria 5301837
249 2929198278 2929195423 Bacteria 5325372
250 2953994839 2953994433 Bacteria 4303959
251 8021625313 8021622325 Bacteria 4844743
252 8021630205 8021626552 Bacteria 4665214
253 8021652135 8021648035 Bacteria 4772378
254 Ga0105248_10046477
255 SwRhRL2b_contig_2054245
256 JGI24738J21930_10005169
257 JGI25162J39368_1001529
258 JGI25157J39369_1001958
259 JGI25164J39214_1000177
260 JGI25165J46597_1000311
261 Ga0055535_1001303
262 Ga0055542_1001309
263 Ga0055529_1000469
264 Ga0058692_1000006
265 Ga0065704_10070423
266 Ga0070658_10004340
267 Ga0070658_10026735
268 Ga0070666_10001033
269 Ga0070666_10016395
270 Ga0070661_100002132
271 Ga0070692_10001703
272 Ga0070668_100002628
273 Ga0070671_100023271
274 Ga0070659_100014339
275 Ga0070667_100004927
276 Ga0070667_100026131
277 Ga0070667_100042789
278 Ga0068867_100011155
279 Ga0070684_100007583
280 Ga0068853_100004050
281 Ga0068853_100024066
282 Ga0068853_100048890
283 Ga0070696_100016135
284 Ga0070693_100006890
285 Ga0070693_100010061
286 Ga0070665_100000100
287 Ga0070665_100000400
288 Ga0068855_100012558
289 Ga0068855_100023245
290 Ga0070664_100015228
291 Ga0068854_100020839
292 Ga0068854_100027989
293 Ga0068856_100003365
294 Ga0068856_100018795
295 Ga0068856_100021331
296 Ga0068856_100039422
297 Ga0068856_100066953
298 Ga0068861_100018923
299 Ga0068863_100004610
300 Ga0068863_100021949
301 Ga0068863_100026491
302 Ga0068863_100044299
303 Ga0068860_100003629
304 Ga0068860_100004492
305 Ga0068860_100018373
306 Ga0068862_100000262
307 Ga0068862_100005447
308 Ga0068862_100026884
309 Ga0081540_1000846
310 Ga0081540_1007502
311 Ga0081540_1009542
312 Ga0097621_100005895
313 Ga0097621_100014163
314 Ga0097621_100016465
315 Ga0068871_100006632
316 Ga0097620_100000151
317 Ga0105251_10000048
318 Ga0105247_10010429
319 Ga0105241_10002695
320 Ga0105248_10038099
321 Ga0105248_10061261
322 Ga0105238_10006539
323 Ga0105239_10006919
324 Ga0105239_10011927
325 Ga0105239_10036741
326 Ga0105239_10053392
327 Ga0157371_10006020
328 Ga0157370_10002879
329 Ga0157370_10009898
330 Ga0157369_10009199
331 Ga0157378_10000031
332 Ga0163162_10021127
333 Ga0157375_10006481
334 Ga0157375_10010591
335 Ga0157375_10024567
336 Ga0163163_10003206
337 Ga0163163_10003715
338 Ga0182008_10002905
339 Ga0157379_10000174
340 Ga0157379_10012342
341 Ga0157376_10000254
342 Ga0157376_10000441
343 Ga0157376_10000871
344 Ga0157376_10002346
345 Ga0157376_10021895
346 Ga0182006_1002385
347 Ga0182006_1002433
348 Ga0182007_10002006
349 Ga0182005_1000004
350 Ga0182005_1001709
351 Ga0206355_1084406
352 Ga0209672_100098
353 Ga0207427_100095
354 Ga0209437_100209
355 Ga0209437_100505
356 Ga0209258_100055
357 Ga0209148_1000058
358 Ga0209759_1000486
359 Ga0209233_1000197
360 Ga0209455_1000018
361 Ga0207656_10006781
362 Ga0207713_1001018
363 Ga0207680_10000960
364 Ga0207647_10000438
365 Ga0207647_10000581
366 Ga0207645_10009126
367 Ga0207705_10001864
368 Ga0207705_10002843
369 Ga0207654_10000571
370 Ga0207707_10020744
371 Ga0207707_10050496
372 Ga0207695_10000330
373 Ga0207660_10001635
374 Ga0207657_10003853
375 Ga0207657_10048908
376 Ga0207649_10001742
377 Ga0207652_10003972
378 Ga0207694_10004543
379 Ga0207694_10020389
380 Ga0207694_10040028
381 Ga0207690_10008943
382 Ga0207706_10015892
383 Ga0207706_10017844
384 Ga0207704_10016478
385 Ga0207691_10013627
386 Ga0207691_10051117
387 Ga0207667_10005880
388 Ga0207667_10015449
389 Ga0207668_10005288
390 Ga0207640_10006295
391 Ga0207639_10005682
392 Ga0207702_10003546
393 Ga0207702_10008878
394 Ga0207702_10010511
395 Ga0207702_10013832
396 Ga0207641_10011580
397 Ga0207641_10036020
398 Ga0207641_10043319
399 Ga0207674_10001158
400 Ga0207674_10050674
401 Ga0207683_10003291
402 Ga0207683_10031979
403 Ga0207698_10037644
404 Ga0209371_1000016
405 Ga0268266_10000001
406 Ga0268266_10000017
407 Ga0268266_10016730
408 Ga0268266_10044404
409 Ga0268265_10000131
410 Ga0268265_10000196
411 Ga0268265_10000372
412 Ga0268265_10000554
413 Ga0268264_10003238
414 Ga0268264_10007508
415 Ga0268264_10009148
416 Ga0268264_10014853
417 Ga0268264_10023408
418 Ga0268264_10039688
419 Ga0268256_1000015
420 Ga0307516_10023266
421 Ga0307412_10037806
422 Ga0395899_0000081
423 Ga0395900_0000024
424 Ga0395900_0026712
425 Ga0395898_0000044
426 Ga0439436_0000034
427 Ga0451797_1338386
428 Ga0451800_0211862
429 Ga0451806_617527
430 Ga0451804_1069471
431 Ga0451807_0413073
432 Ga0466969_0000306
433 Ga0466972_0000253
434 Ga0466966_0003883
435 Ga0466961_0000222
436 Ga0466961_0002263
437 Ga0466970_0000329
438 Ga0466957_0004370
439 Ga0466959_0000362
440 Ga0466959_0039599
441 Ga0495638_0000060
442 Ga0495610_0000902
443 Ga0495633_0002621
444 Ga0496114_0053619
445 Ga0496115_0000058
446 Ga0496117_0002197
447 Ga0496118_0001504
448 Ga0496119_0000951
449 Ga0496120_0000276
450 Ga0496122_0001634
451 Ga0496123_0000374
452 Ga0496124_0000815
453 Ga0496126_0000558
454 Ga0501031_0002695
455 Ga0501032_0003059
456 Ga0501032_0014235
457 Ga0501032_0021080
458 Ga0501033_0023452
459 Ga0501034_0001111
460 Ga0501034_0003304
461 Ga0501034_0019164
462 Ga0501034_0055934
463 Ga0501038_0012109
464 Ga0501039_0002932
465 Ga0501039_0008474
466 Ga0501043_0003705
467 Ga0501046_0000908
468 Ga0501046_0009135
469 Ga0501046_0009227
470 Ga0501047_0001208
471 Ga0501047_0002412
472 Ga0501047_0030769
473 Ga0501047_0078167
474 Ga0501073_0004834
475 Ga0501073_0015612
476 Ga0501080_0000776
477 Ga0501080_0028095
478 Ga0501035_0003547
479 Ga0501035_0004820
480 Ga0501035_0018380
481 Ga0501044_0004661
482 Ga0501044_0013450
483 Ga0501044_0023567
484 Ga0501044_0045771
485 nmdc:mga0n895_36723_c1
486 Ga0500610_0000087
487 Ga0500610_0000463
488 Ga0500651_0000154
489 Ga0500651_0008537
490 Ga0500568_0000674
491 Ga0500568_0000874
492 Ga0500568_0000950
493 Ga0500568_0001858
494 Ga0500634_0000548
495 Ga0501082_0001099
496 Ga0501082_0039285
497 2748016432
498 2819660006
499 2852685178
500 2919085478
501 2919130718
502 2929198278
503 2953994839
504 8021625313
505 8021630205
506 8021652135

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

144

252

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rgm-assembly1.cif.gz_A crystal structure of spin-labeled btub t156r1 0.842 67 959
3m8b-assembly1.cif.gz_A crystal structure of spin-labeled btub v10r1 in the apo state 0.8391 64 959
3m8b-assembly1.cif.gz_A crystal structure of spin-labeled btub v10r1 in the apo state 0.8377 64 959
3rgm-assembly1.cif.gz_A crystal structure of spin-labeled btub t156r1 0.8377 67 959
3rgn-assembly1.cif.gz_A crystal structure of spin-labeled btub w371r1 0.834 64 959
ID Description Score Start End Superfamily
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8274 189 959 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8257 189 959 2.40.170.20
3fhhA01 Mainly Beta;Beta Complex;Ferric Hydroxamate Uptake Protein; Chain A, domain 1;TonB-dependent receptor, plug domain 0.782 84 189 2.170.130.10
3fhhA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7807 190 959 2.40.170.20
3fhhA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7645 190 959 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A509E266-F1-model_v4 deleted 0.8917 56 959
AF-A0A2H0DGG0-F1-model_v4 TonB-dependent receptor 0.8796 338 959 GO:0009279
AF-A0A2H0DGG0-F1-model_v4 TonB-dependent receptor 0.8766 338 959 GO:0009279
AF-A0A5A7MZ20-F1-model_v4 TonB-dependent receptor 0.8648 64 959 GO:0009279
AF-A0A4V1ZRR5-F1-model_v4 TonB-dependent receptor 0.8602 153 453

Map