F367391

General Info

Members Datasets Scaffolds Average Seq Length
257 187 514 356

Family's Representative Sequence

Representative Sequence 3300028794|Ga0307515_10079941|Ga0307515_100799412
Length 402
Sequence MSEVCEHGGILLKTPSAAHTQSYVERQSATLRRTHRSGNDALVTLAELGWNDFFATAFMPHAAEGALPARVTLELKGYVEVTGDFGARLGECTGKFINTAKAPANFPAIGDWVAVTPQIGEEQRVAIHAVLPRRTKFSRRAAGMEVLEQVVAANVDTVFLVSSLDGNHHLHRLERYLAAAWASGAEPVVILNKADLSEEDETALRQEITDVAPQVPVFTVSAQTRRGLKALAPYLQPGRTIALLGSSGVGKSTLINRLMGEKVQFTQEVREADNKGRHTTTQRELLITPDGAIIIDTPGMREIQPWEATASLAGAFDDVASIAARCKFRDCQHTVEPGCAVRTALEDGSLDRLRWEGYCRLQRATLHEARRVDRPAQAQHRSQMKKMTKSLRQRVREKHGEE

Samples

Sample ID Description Type Environment
1 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
51 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
73 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
74 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
80 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
81 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
84 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
85 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
86 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
92 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
93 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
94 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
95 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
96 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
102 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
103 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
112 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
113 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
114 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
121 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
128 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
146 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
147 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
148 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
149 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
158 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
161 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
162 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
165 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
166 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
167 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
172 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
173 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
174 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
175 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
176 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
177 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
178 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
179 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
180 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
181 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
182 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
183 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
184 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
185 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
186 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
187 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.39
Metatranscriptomes 0
Isolates 6.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.06
Nodule 0.39
Rhizoplane 2.72
Rhizosphere 84.05
Stem 0
Stem Tuber 0
Unclassified 3.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307515_10079941 3300028794 Bacteria 4273
2 rootH2_10023357 3300003320 Bacteria 23359
3 rootL2_10030167 3300003322 Bacteria 2285
4 rootH1_10080355 3300003323 Bacteria 3421
5 Ga0055532_1001664 3300003758 Bacteria 5772
6 Ga0068869_100005417 3300005334 Bacteria 8025
7 Ga0068869_100188113 3300005334 Unclassified 1622
8 Ga0070666_10046372 3300005335 Bacteria 2915
9 Ga0068868_100024454 3300005338 Bacteria 4584
10 Ga0070668_100011631 3300005347 Bacteria 6549
11 Ga0070668_100017642 3300005347 Bacteria 5352
12 Ga0070669_100124716 3300005353 Bacteria 1969
13 Ga0070674_100004542 3300005356 Bacteria 7925
14 Ga0070688_100108065 3300005365 Bacteria 1845
15 Ga0070703_10015005 3300005406 Bacteria 2213
16 Ga0070701_10019281 3300005438 Bacteria 3219
17 Ga0070705_100007667 3300005440 Bacteria 5323
18 Ga0068867_100004210 3300005459 Bacteria 10128
19 Ga0070685_10021154 3300005466 Bacteria 3533
20 Ga0070706_100109562 3300005467 Bacteria 2570
21 Ga0070706_100288606 3300005467 Bacteria 1531
22 Ga0070698_100018881 3300005471 Bacteria 7254
23 Ga0070698_100022290 3300005471 Bacteria 6627
24 Ga0070698_100090308 3300005471 Bacteria 3047
25 Ga0070699_100027624 3300005518 Bacteria 4893
26 Ga0070696_100000335 3300005546 Bacteria 28508
27 Ga0070696_100030687 3300005546 Bacteria 3681
28 Ga0070704_100070565 3300005549 Bacteria 2535
29 Ga0070704_100114065 3300005549 Bacteria 2062
30 Ga0068856_100126132 3300005614 Bacteria 2563
31 Ga0068859_100000009 3300005617 Bacteria 380451
32 Ga0068859_100528097 3300005617 Bacteria 1275
33 Ga0068866_10019349 3300005718 Bacteria 3098
34 Ga0068861_100051737 3300005719 Bacteria 3119
35 Ga0068863_100221829 3300005841 Bacteria 1822
36 Ga0068858_100002118 3300005842 Bacteria 20137
37 Ga0068860_100000109 3300005843 Bacteria 132169
38 Ga0068862_100074716 3300005844 Bacteria 2930
39 Ga0081539_10000398 3300005985 Bacteria 93250
40 Ga0097621_100023774 3300006237 Bacteria 4775
41 Ga0068871_100001628 3300006358 Bacteria 15122
42 Ga0068871_100164438 3300006358 Bacteria 1899
43 Ga0075428_100017243 3300006844 Bacteria 7980
44 Ga0075428_100032025 3300006844 Bacteria 5809
45 Ga0075431_100361121 3300006847 Unclassified 1459
46 Ga0075429_100075239 3300006880 Bacteria 2941
47 Ga0068865_100000818 3300006881 Bacteria 17540
48 Ga0097620_100000009 3300006931 Bacteria 380451
49 Ga0097620_100528109 3300006931 Bacteria 1275
50 Ga0075435_100047522 3300007076 Bacteria 3446
51 Ga0075435_100094222 3300007076 Bacteria 2475
52 Ga0111539_10001612 3300009094 Bacteria 30141
53 Ga0111539_10005230 3300009094 Bacteria 16809
54 Ga0105247_10013464 3300009101 Bacteria 4906
55 Ga0114129_10001743 3300009147 Bacteria 29593
56 Ga0114129_10673365 3300009147 Bacteria 1333
57 Ga0105243_10014039 3300009148 Bacteria 6062
58 Ga0105248_10034617 3300009177 Bacteria 5650
59 Ga0105248_10132239 3300009177 Bacteria 2815
60 Ga0105238_10056448 3300009551 Bacteria 3940
61 Ga0105249_10277789 3300009553 Bacteria 1671
62 Ga0163163_10000019 3300014325 Bacteria 199037
63 Ga0163163_10008376 3300014325 Bacteria 9184
64 Ga0157379_10027350 3300014968 Bacteria 5078
65 Ga0157376_10163043 3300014969 Bacteria 2023
66 Ga0213876_10000044 3300021384 Bacteria 161765
67 Ga0213876_10000117 3300021384 Bacteria 86431
68 Ga0213876_10078386 3300021384 Bacteria 1746
69 Ga0209147_100045 3300025229 Bacteria 299264
70 Ga0209675_1008955 3300025291 Bacteria 3598
71 Ga0209025_1004738 3300025294 Bacteria 11583
72 Ga0209256_1005453 3300025299 Bacteria 7321
73 Ga0207642_10031044 3300025899 Unclassified 2234
74 Ga0207710_10005992 3300025900 Bacteria 5211
75 Ga0207680_10060177 3300025903 Bacteria 2311
76 Ga0207684_10062539 3300025910 Bacteria 3161
77 Ga0207654_10061686 3300025911 Bacteria 2194
78 Ga0207694_10022255 3300025924 Bacteria 4808
79 Ga0207704_10000834 3300025938 Bacteria 13648
80 Ga0207711_10231418 3300025941 Bacteria 1693
81 Ga0207689_10010477 3300025942 Bacteria 7984
82 Ga0207661_10057056 3300025944 Bacteria 3138
83 Ga0207668_10024266 3300025972 Bacteria 3911
84 Ga0207668_10036208 3300025972 Bacteria 3292
85 Ga0207703_10086192 3300026035 Bacteria 2630
86 Ga0207708_10195280 3300026075 Bacteria 1613
87 Ga0207648_10009217 3300026089 Bacteria 9479
88 Ga0207648_10031152 3300026089 Bacteria 4716
89 Ga0207428_10015147 3300027907 Bacteria 6673
90 Ga0207428_10026075 3300027907 Bacteria 4883
91 Ga0268265_10025268 3300028380 Bacteria 4213
92 Ga0268265_10047623 3300028380 Bacteria 3213
93 Ga0268264_10000002 3300028381 Bacteria 1153045
94 Ga0268264_10052712 3300028381 Bacteria 3392
95 Ga0268264_10183472 3300028381 Bacteria 1902
96 Ga0265319_1000480 3300028563 Bacteria 28082
97 Ga0265334_10000761 3300028573 Bacteria 16149
98 Ga0265318_10000004 3300028577 Bacteria 319325
99 Ga0265318_10000743 3300028577 Bacteria 21762
100 Ga0265318_10045737 3300028577 Bacteria 1655
101 Ga0265320_10001535 3300031240 Bacteria 16720
102 Ga0265320_10004509 3300031240 Bacteria 9113
103 Ga0265331_10006394 3300031250 Bacteria 6974
104 Ga0265327_10000931 3300031251 Bacteria 42877
105 Ga0265316_10167796 3300031344 Bacteria 1639
106 Ga0307408_100000009 3300031548 Bacteria 426576
107 Ga0307408_100041329 3300031548 Bacteria 3269
108 Ga0265313_10001136 3300031595 Bacteria 25421
109 Ga0307508_10000714 3300031616 Bacteria 39424
110 Ga0307508_10066520 3300031616 Bacteria 3173
111 Ga0265314_10001034 3300031711 Bacteria 32387
112 Ga0265314_10005712 3300031711 Bacteria 11160
113 Ga0307410_10100956 3300031852 Bacteria 2068
114 Ga0307406_10069386 3300031901 Bacteria 2304
115 Ga0307407_10000972 3300031903 Bacteria 9787
116 Ga0307412_10013175 3300031911 Bacteria 4840
117 Ga0307409_100000042 3300031995 Bacteria 44583
118 Ga0307416_100000018 3300032002 Bacteria 200227
119 Ga0307416_100091483 3300032002 Bacteria 2613
120 Ga0307416_100369669 3300032002 Bacteria 1459
121 Ga0307411_10070542 3300032005 Bacteria 2365
122 Ga0307411_10083258 3300032005 Bacteria 2209
123 Ga0307415_100182245 3300032126 Bacteria 1649
124 Ga0373934_0001453 3300035086 Bacteria 8671
125 Ga0373953_0082759 3300035117 Bacteria 1336
126 Ga0373954_0021959 3300035118 Bacteria 2893
127 Ga0373956_0003043 3300035119 Bacteria 6788
128 Ga0373957_0040997 3300035120 Bacteria 1742
129 Ga0373955_0006788 3300035172 Bacteria 5229
130 Ga0373935_0004083 3300035692 Bacteria 8540
131 Ga0373937_0000099 3300036401 Bacteria 81601
132 Ga0395905_0000030 3300037471 Bacteria 289430
133 Ga0395905_0047564 3300037471 Bacteria 4019
134 Ga0436365_0563106 3300039437 Bacteria 187681
135 Ga0436365_0578117 3300039437 Bacteria 119375
136 Ga0436365_0824169 3300039437 Bacteria 1767
137 Ga0451807_0463018 3300041486 Bacteria 3164
138 Ga0439446_0003937 3300042156 Bacteria 3733
139 Ga0439460_0013343 3300042461 Bacteria 2148
140 Ga0451577_0000023 3300042876 Bacteria 419051
141 Ga0451577_0020295 3300042876 Bacteria 6100
142 Ga0451577_0065379 3300042876 Bacteria 3244
143 Ga0451577_0131683 3300042876 Bacteria 2243
144 Ga0451577_0145370 3300042876 Bacteria 2132
145 Ga0453683_0000038 3300044673 Bacteria 229847
146 Ga0453683_0034178 3300044673 Bacteria 3205
147 Ga0453684_0003607 3300044712 Bacteria 34542
148 Ga0453684_0023816 3300044712 Bacteria 8988
149 Ga0453684_0033876 3300044712 Bacteria 7107
150 Ga0453684_0041734 3300044712 Bacteria 6197
151 Ga0453684_0092211 3300044712 Bacteria 3735
152 Ga0453684_0146741 3300044712 Bacteria 2809
153 Ga0451576_0017029 3300045051 Bacteria 8000
154 Ga0451576_0018051 3300045051 Bacteria 7742
155 Ga0451576_0110918 3300045051 Bacteria 2855
156 Ga0451576_0153901 3300045051 Bacteria 2398
157 Ga0451576_0458266 3300045051 Bacteria 1339
158 Ga0495592_0066794 3300046454 Bacteria 2631
159 Ga0495638_0002617 3300046460 Bacteria 14483
160 Ga0495638_0027759 3300046460 Bacteria 3661
161 Ga0495653_0092234 3300046463 Bacteria 2212
162 Ga0495650_0000030 3300046471 Bacteria 436318
163 Ga0495632_0000545 3300046519 Bacteria 35398
164 Ga0495648_0024021 3300046524 Bacteria 4162
165 Ga0495654_0000129 3300046530 Bacteria 81860
166 Ga0495668_0002079 3300046616 Bacteria 17342
167 Ga0495668_0002945 3300046616 Bacteria 13432
168 Ga0495668_0040190 3300046616 Bacteria 2609
169 Ga0495625_0080440 3300046660 Bacteria 2269
170 Ga0495659_0004541 3300046664 Bacteria 4368
171 Ga0495672_0000327 3300047320 Bacteria 62456
172 Ga0495680_0068126 3300047322 Bacteria 2720
173 Ga0495673_0000191 3300047469 Bacteria 96817
174 Ga0495673_0002226 3300047469 Bacteria 13929
175 Ga0495686_0004571 3300047472 Bacteria 11315
176 Ga0496108_0262947 3300048911 Bacteria 1502
177 Ga0496110_0016956 3300048913 Bacteria 6088
178 Ga0496112_0009886 3300048915 Bacteria 8624
179 Ga0496112_0171719 3300048915 Bacteria 2133
180 Ga0496113_0139423 3300048916 Unclassified 1907
181 Ga0496114_0000040 3300048917 Bacteria 137465
182 Ga0496121_0139322 3300048924 Bacteria 1802
183 Ga0501299_009939 3300049522 Bacteria 1579
184 Ga0501031_0090661 3300049568 Bacteria 1994
185 Ga0501032_0002820 3300049569 Bacteria 13521
186 Ga0501033_0175396 3300049570 Bacteria 1538
187 Ga0501034_0103230 3300049571 Bacteria 2844
188 Ga0501034_0108219 3300049571 Bacteria 2771
189 Ga0501034_0340515 3300049571 Bacteria 1430
190 Ga0501036_0059344 3300049572 Unclassified 3242
191 Ga0501036_0243885 3300049572 Bacteria 1507
192 Ga0501038_0192252 3300049574 Bacteria 1642
193 Ga0501039_0148509 3300049575 Unclassified 1842
194 Ga0501039_0192684 3300049575 Bacteria 1603
195 Ga0501040_0049562 3300049576 Bacteria 2871
196 Ga0501041_0189469 3300049577 Bacteria 1288
197 Ga0501042_0017355 3300049578 Bacteria 4963
198 Ga0501043_0027798 3300049579 Bacteria 4440
199 Ga0501043_0233859 3300049579 Bacteria 1419
200 Ga0501046_0017132 3300049580 Bacteria 6054
201 Ga0501046_0023039 3300049580 Bacteria 5127
202 Ga0501047_0047125 3300049581 Unclassified 4164
203 Ga0501048_0039739 3300049582 Bacteria 3373
204 Ga0501071_0022446 3300049587 Bacteria 4399
205 Ga0501072_0023881 3300049588 Bacteria 4751
206 Ga0501075_0049158 3300049591 Bacteria 3170
207 Ga0501076_0007562 3300049592 Bacteria 7909
208 Ga0501076_0046330 3300049592 Bacteria 3435
209 Ga0501077_0058512 3300049593 Bacteria 2447
210 Ga0501077_0061560 3300049593 Bacteria 2382
211 Ga0501077_0183349 3300049593 Bacteria 1330
212 Ga0501079_0187530 3300049741 Bacteria 1614
213 Ga0501081_0238318 3300049743 Bacteria 1326
214 Ga0501083_0248787 3300049744 Bacteria 1157
215 Ga0501035_0047723 3300049822 Unclassified 3842
216 Ga0501044_0000739 3300049823 Bacteria 39401
217 Ga0501044_0010238 3300049823 Bacteria 10183
218 Ga0501044_0180267 3300049823 Bacteria 2080
219 nmdc:mga05p37_534614_c1 3300050507 Bacteria 1338
220 nmdc:mga05p37_741_c2 3300050507 Bacteria 27411
221 nmdc:mga06r32_161434_c1 3300050510 Unclassified 2223
222 nmdc:mga08y16_14250_c1 3300050511 Bacteria 8367
223 nmdc:mga08y16_40367_c1 3300050511 Bacteria 4893
224 nmdc:mga0n895_15315_c1 3300050512 Bacteria 6987
225 nmdc:mga0rr50_102373_c1 3300050513 Bacteria 2253
226 nmdc:mga0rr50_34254_c1 3300050513 Bacteria 3635
227 nmdc:mga08x19_92263_c1 3300050514 Unclassified 2000
228 nmdc:mga0a205_46017_c1 3300050515 Bacteria 4208
229 Ga0500644_0000126 3300053088 Bacteria 47091
230 Ga0500559_0000033 3300053136 Bacteria 112277
231 Ga0500564_000018 3300053138 Bacteria 52235
232 Ga0500616_0085562 3300053153 Bacteria 1574
233 Ga0500627_0004698 3300053158 Bacteria 4426
234 Ga0500633_0040341 3300053160 Bacteria 1566
235 Ga0500584_047930 3300053726 Bacteria 1941
236 Ga0500609_001584 3300053731 Bacteria 3320
237 Ga0501084_0264033 3300054114 Bacteria 1453
238 Ga0501082_0111736 3300060353 Bacteria 2365
239 Ga0530510_0019887 3300061734 Bacteria 4771
240 Ga0530510_0081785 3300061734 Bacteria 2352
241 2511180321 2510917027 Bacteria 5287437
242 2512639336 2512564013 Bacteria 6286191
243 2512736752 2512564039 Bacteria 8739048
244 2792463614 2791355048 Bacteria 5832535
245 2843748407 2843744320 Bacteria 5659202
246 2849576555 2849573788 Bacteria 5421256
247 2857463255 2857460504 Bacteria 5194327
248 2857469398 2857465823 Bacteria 6772595
249 2857595201 2857591370 Bacteria 6569758
250 2884962042 2884960567 Bacteria 5437054
251 2898330016 2898329390 Bacteria 5168154
252 2915603174 2915597211 Bacteria 6475886
253 2915611679 2915606848 Bacteria 6032732
254 2928535209 2928531327 Bacteria 5101314
255 2929188233 2929183550 Bacteria 6377511
256 2980187959 2980182181 Bacteria 9454109
257 3006977976 3006973921 Bacteria 4423788
258 Ga0307515_10079941
259 rootH2_10023357
260 rootL2_10030167
261 rootH1_10080355
262 Ga0055532_1001664
263 Ga0068869_100005417
264 Ga0068869_100188113
265 Ga0070666_10046372
266 Ga0068868_100024454
267 Ga0070668_100011631
268 Ga0070668_100017642
269 Ga0070669_100124716
270 Ga0070674_100004542
271 Ga0070688_100108065
272 Ga0070703_10015005
273 Ga0070701_10019281
274 Ga0070705_100007667
275 Ga0068867_100004210
276 Ga0070685_10021154
277 Ga0070706_100109562
278 Ga0070706_100288606
279 Ga0070698_100018881
280 Ga0070698_100022290
281 Ga0070698_100090308
282 Ga0070699_100027624
283 Ga0070696_100000335
284 Ga0070696_100030687
285 Ga0070704_100070565
286 Ga0070704_100114065
287 Ga0068856_100126132
288 Ga0068859_100000009
289 Ga0068859_100528097
290 Ga0068866_10019349
291 Ga0068861_100051737
292 Ga0068863_100221829
293 Ga0068858_100002118
294 Ga0068860_100000109
295 Ga0068862_100074716
296 Ga0081539_10000398
297 Ga0097621_100023774
298 Ga0068871_100001628
299 Ga0068871_100164438
300 Ga0075428_100017243
301 Ga0075428_100032025
302 Ga0075431_100361121
303 Ga0075429_100075239
304 Ga0068865_100000818
305 Ga0097620_100000009
306 Ga0097620_100528109
307 Ga0075435_100047522
308 Ga0075435_100094222
309 Ga0111539_10001612
310 Ga0111539_10005230
311 Ga0105247_10013464
312 Ga0114129_10001743
313 Ga0114129_10673365
314 Ga0105243_10014039
315 Ga0105248_10034617
316 Ga0105248_10132239
317 Ga0105238_10056448
318 Ga0105249_10277789
319 Ga0163163_10000019
320 Ga0163163_10008376
321 Ga0157379_10027350
322 Ga0157376_10163043
323 Ga0213876_10000044
324 Ga0213876_10000117
325 Ga0213876_10078386
326 Ga0209147_100045
327 Ga0209675_1008955
328 Ga0209025_1004738
329 Ga0209256_1005453
330 Ga0207642_10031044
331 Ga0207710_10005992
332 Ga0207680_10060177
333 Ga0207684_10062539
334 Ga0207654_10061686
335 Ga0207694_10022255
336 Ga0207704_10000834
337 Ga0207711_10231418
338 Ga0207689_10010477
339 Ga0207661_10057056
340 Ga0207668_10024266
341 Ga0207668_10036208
342 Ga0207703_10086192
343 Ga0207708_10195280
344 Ga0207648_10009217
345 Ga0207648_10031152
346 Ga0207428_10015147
347 Ga0207428_10026075
348 Ga0268265_10025268
349 Ga0268265_10047623
350 Ga0268264_10000002
351 Ga0268264_10052712
352 Ga0268264_10183472
353 Ga0265319_1000480
354 Ga0265334_10000761
355 Ga0265318_10000004
356 Ga0265318_10000743
357 Ga0265318_10045737
358 Ga0265320_10001535
359 Ga0265320_10004509
360 Ga0265331_10006394
361 Ga0265327_10000931
362 Ga0265316_10167796
363 Ga0307408_100000009
364 Ga0307408_100041329
365 Ga0265313_10001136
366 Ga0307508_10000714
367 Ga0307508_10066520
368 Ga0265314_10001034
369 Ga0265314_10005712
370 Ga0307410_10100956
371 Ga0307406_10069386
372 Ga0307407_10000972
373 Ga0307412_10013175
374 Ga0307409_100000042
375 Ga0307416_100000018
376 Ga0307416_100091483
377 Ga0307416_100369669
378 Ga0307411_10070542
379 Ga0307411_10083258
380 Ga0307415_100182245
381 Ga0373934_0001453
382 Ga0373953_0082759
383 Ga0373954_0021959
384 Ga0373956_0003043
385 Ga0373957_0040997
386 Ga0373955_0006788
387 Ga0373935_0004083
388 Ga0373937_0000099
389 Ga0395905_0000030
390 Ga0395905_0047564
391 Ga0436365_0563106
392 Ga0436365_0578117
393 Ga0436365_0824169
394 Ga0451807_0463018
395 Ga0439446_0003937
396 Ga0439460_0013343
397 Ga0451577_0000023
398 Ga0451577_0020295
399 Ga0451577_0065379
400 Ga0451577_0131683
401 Ga0451577_0145370
402 Ga0453683_0000038
403 Ga0453683_0034178
404 Ga0453684_0003607
405 Ga0453684_0023816
406 Ga0453684_0033876
407 Ga0453684_0041734
408 Ga0453684_0092211
409 Ga0453684_0146741
410 Ga0451576_0017029
411 Ga0451576_0018051
412 Ga0451576_0110918
413 Ga0451576_0153901
414 Ga0451576_0458266
415 Ga0495592_0066794
416 Ga0495638_0002617
417 Ga0495638_0027759
418 Ga0495653_0092234
419 Ga0495650_0000030
420 Ga0495632_0000545
421 Ga0495648_0024021
422 Ga0495654_0000129
423 Ga0495668_0002079
424 Ga0495668_0002945
425 Ga0495668_0040190
426 Ga0495625_0080440
427 Ga0495659_0004541
428 Ga0495672_0000327
429 Ga0495680_0068126
430 Ga0495673_0000191
431 Ga0495673_0002226
432 Ga0495686_0004571
433 Ga0496108_0262947
434 Ga0496110_0016956
435 Ga0496112_0009886
436 Ga0496112_0171719
437 Ga0496113_0139423
438 Ga0496114_0000040
439 Ga0496121_0139322
440 Ga0501299_009939
441 Ga0501031_0090661
442 Ga0501032_0002820
443 Ga0501033_0175396
444 Ga0501034_0103230
445 Ga0501034_0108219
446 Ga0501034_0340515
447 Ga0501036_0059344
448 Ga0501036_0243885
449 Ga0501038_0192252
450 Ga0501039_0148509
451 Ga0501039_0192684
452 Ga0501040_0049562
453 Ga0501041_0189469
454 Ga0501042_0017355
455 Ga0501043_0027798
456 Ga0501043_0233859
457 Ga0501046_0017132
458 Ga0501046_0023039
459 Ga0501047_0047125
460 Ga0501048_0039739
461 Ga0501071_0022446
462 Ga0501072_0023881
463 Ga0501075_0049158
464 Ga0501076_0007562
465 Ga0501076_0046330
466 Ga0501077_0058512
467 Ga0501077_0061560
468 Ga0501077_0183349
469 Ga0501079_0187530
470 Ga0501081_0238318
471 Ga0501083_0248787
472 Ga0501035_0047723
473 Ga0501044_0000739
474 Ga0501044_0010238
475 Ga0501044_0180267
476 nmdc:mga05p37_534614_c1
477 nmdc:mga05p37_741_c2
478 nmdc:mga06r32_161434_c1
479 nmdc:mga08y16_14250_c1
480 nmdc:mga08y16_40367_c1
481 nmdc:mga0n895_15315_c1
482 nmdc:mga0rr50_102373_c1
483 nmdc:mga0rr50_34254_c1
484 nmdc:mga08x19_92263_c1
485 nmdc:mga0a205_46017_c1
486 Ga0500644_0000126
487 Ga0500559_0000033
488 Ga0500564_000018
489 Ga0500616_0085562
490 Ga0500627_0004698
491 Ga0500633_0040341
492 Ga0500584_047930
493 Ga0500609_001584
494 Ga0501084_0264033
495 Ga0501082_0111736
496 Ga0530510_0019887
497 Ga0530510_0081785
498 2511180321
499 2512639336
500 2512736752
501 2792463614
502 2843748407
503 2849576555
504 2857463255
505 2857469398
506 2857595201
507 2884962042
508 2898330016
509 2915603174
510 2915611679
511 2928535209
512 2929188233
513 2980187959
514 3006977976

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03193

RsgA_GTPase

RsgA GTPase

130

306

0.94

PF00005

ABC_tran

ABC transporter

228

313

0.83

PF01926

MMR_HSR1

50S ribosome-binding GTPase

240

337

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bts-assembly1.cif.gz_C0 the crystal structure of the eukaryotic 40s ribosomal subunit in complex with eif1 and eif1a 0.8533 23 90
8ppl-assembly1.cif.gz_Iq mers-cov nsp1 bound to the human 43s pre-initiation complex 0.8527 23 90
7tql-assembly1.cif.gz_4 cryoem structure of the human 40s small ribosomal subunit in complex with translation initiation factors eif1a and eif5b. 0.8503 23 90
6zp4-assembly1.cif.gz_G sars-cov-2 nsp1 bound to a human 43s preinitiation ribosome complex - state 2 0.8477 23 90
3jam-assembly1.cif.gz_i cryoem structure of 40s-eif1a-eif1 complex from yeast 0.8307 23 92
ID Description Score Start End Superfamily
af_I1JZH0_64_142_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8821 24 90 2.40.50.140
af_F4HTL8_152_282_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8599 89 217 3.40.50.300
af_F4K1D3_2_133_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.843 23 90 2.40.50.140
af_P39286_103_275_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8393 91 259 3.40.50.300
2yv5A01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8371 24 90 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A350XMK2-F1-model_v4 Ribosome small subunit-dependent GTPase 0.9549 1 153 GO:0003924
GO:0005525
AF-A0A168MT13-F1-model_v4 EngC GTPase domain-containing protein 0.9537 1 182 GO:0003924
GO:0005525
AF-A0A168MT13-F1-model_v4 EngC GTPase domain-containing protein 0.9486 1 182 GO:0003924
GO:0005525
AF-A0A7C8DL02-F1-model_v4 deleted 0.9481 21 213
AF-A0A165R0Z6-F1-model_v4 Putative GTPase 0.9446 1 200 GO:0003924
GO:0005525

Map