F367385

General Info

Members Datasets Scaffolds Average Seq Length
257 157 254 1041

Family's Representative Sequence

Representative Sequence 3300028381|Ga0268264_10011175|Ga0268264_100111753
Length 1086
Sequence MGWENRTFMTMSIQREKLQQHFQEEYRRLNEQQRLAVDTTEGPVMVIAGPGTGKTQILAARIGKILLDTDVSPDNILCLTYTDAGAIAMRRRLLTFIGPDAYKVNIHTFHSFCNDIIQENLSLFEKTSLDPISDLEKIQLFKTLIDNFPKNHPLKRYRGDVYFEMYNLQNLFSTMKREGWTPQWIGAKIDQYIADLPTRDEYIAKRATGNFKKGDVRTDKIAEETEKMEKLRAAVGEFDRFQELMRRRNRYDFDDMINWVIRAFEENKALLANYQERYQYILVDEYQDTSGTQNRLVSLLINYWDKPNVFVVGDDDQSIYRFQGANVENMLDFAHQYEKDLLTVVLTNNYRSTQPILDISRTLIDKNTERLVQQLPNLSKRLVSSHPLISTLKYPPHIIEYKDSRDEMTDITLHIERLVKEEGVPPGRIAVIYKENKYGEELAKFLKLKKIPVYSKRSLDLFEVPFAQKIILLLRYLAAEHDAPYGGDEMLFEILHFDFFSIAPIEVAKLSVEVADKQFSDERTSIRRLLHEKAARPARDLFDSGLPEGMKKASRALEKLIGDASNVTLQTLFENCIRDTGLLAYIIQSPEKVWLMQVLTALFDFIKEESRRDPDLNLERLVQTIDLMKDNGIPLPLIQVAGSDKAVNLLTAHGSKGLEFAYVFFAGCNASTWEKKRKPGGGYKYPDNLFDSRGPANGISGQTGPANDQGAVNGQTSKASDEEELRRLFYVALTRVEQHLFISYARYKTDGKELEPSVFIAEILDQHALEVKKVAVPEETMADFEVLTFTEDIIAPEIASAEEAFISRMLEKFVMNVTALNNYLKCPLEFYYKTLIRIPSPKNEATEFGSAVHFALQRLFEKMKAHVEERFPDKAEMLQDFNWYMHRHREIFTREAFARRMEYGIEVLGNYYDKYIYQWNKIVAVERNIRNVTVKGIPLKGKLDKLEFQGKEVNVVDYKTGDVDKAKDKLAPPSDKDPNGGDYWRQAVFYKILVDSYEQKDWKVVSTEFDFVEPDKKKEYRKAKITITPADITTVIQQIETTWKKIQNREFYTGCGRADCHWCNFVKTNNLAIALHTADDEVEEDA

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2818991444 Filimonas endophytica 3197 Isolate Unclassified
3 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
75 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
117 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
118 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
119 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
123 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
126 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
127 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
128 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
151 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
152 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
153 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
154 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
155 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
156 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
157 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.83
Metatranscriptomes 0
Isolates 1.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.28
Nodule 0
Rhizoplane 0.39
Rhizosphere 91.44
Stem 0
Stem Tuber 0
Unclassified 3.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10007161 3300003320 Bacteria 44535
2 JGI25160J50197_1003608 3300003354 Bacteria 6872
3 Ga0065715_10008177 3300005293 Bacteria 4153
4 Ga0065707_10086829 3300005295 Bacteria 5264
5 Ga0070676_10012487 3300005328 Bacteria 4639
6 Ga0070683_100001981 3300005329 Bacteria 16040
7 Ga0070683_100002633 3300005329 Bacteria 14348
8 Ga0070683_100018422 3300005329 Bacteria 6185
9 Ga0070666_10019394 3300005335 Bacteria 4389
10 Ga0070682_100000041 3300005337 Bacteria 142152
11 Ga0070682_100008995 3300005337 Bacteria 5643
12 Ga0068868_100003237 3300005338 Bacteria 11331
13 Ga0068868_100017209 3300005338 Bacteria 5380
14 Ga0068868_100034938 3300005338 Bacteria 3883
15 Ga0070660_100008792 3300005339 Bacteria 7074
16 Ga0070660_100043308 3300005339 Bacteria 3440
17 Ga0070689_100006347 3300005340 Bacteria 8169
18 Ga0070689_100015795 3300005340 Bacteria 5514
19 Ga0070691_10010460 3300005341 Bacteria 4234
20 Ga0070661_100002223 3300005344 Bacteria 13309
21 Ga0070668_100004302 3300005347 Bacteria 10567
22 Ga0070668_100046310 3300005347 Bacteria 3339
23 Ga0070669_100007009 3300005353 Bacteria 8101
24 Ga0070675_100008308 3300005354 Bacteria 8055
25 Ga0070675_100027972 3300005354 Unclassified 4534
26 Ga0070671_100004817 3300005355 Bacteria 10727
27 Ga0070671_100018227 3300005355 Bacteria 5699
28 Ga0070673_100000996 3300005364 Bacteria 16065
29 Ga0070673_100029208 3300005364 Bacteria 4110
30 Ga0070659_100003036 3300005366 Bacteria 11938
31 Ga0070667_100010943 3300005367 Bacteria 7504
32 Ga0070667_100018884 3300005367 Bacteria 5715
33 Ga0070701_10016385 3300005438 Bacteria 3445
34 Ga0070662_100008691 3300005457 Bacteria 6623
35 Ga0070681_10004855 3300005458 Bacteria 12895
36 Ga0070681_10018077 3300005458 Bacteria 7047
37 Ga0068867_100001595 3300005459 Bacteria 15758
38 Ga0070698_100002009 3300005471 Bacteria 22594
39 Ga0070679_100015550 3300005530 Bacteria 7312
40 Ga0070679_100017147 3300005530 Bacteria 7003
41 Ga0070684_100011378 3300005535 Bacteria 7088
42 Ga0068853_100007624 3300005539 Bacteria 8671
43 Ga0068853_100007735 3300005539 Bacteria 8618
44 Ga0068853_100012961 3300005539 Bacteria 6796
45 Ga0068853_100027331 3300005539 Bacteria 4793
46 Ga0070693_100010915 3300005547 Bacteria 4563
47 Ga0070665_100000002 3300005548 Bacteria 849037
48 Ga0070665_100003483 3300005548 Bacteria 16764
49 Ga0070664_100007908 3300005564 Bacteria 8589
50 Ga0068857_100006684 3300005577 Bacteria 9912
51 Ga0068857_100009430 3300005577 Bacteria 8471
52 Ga0068854_100015340 3300005578 Bacteria 5073
53 Ga0068854_100030789 3300005578 Bacteria 3724
54 Ga0068852_100006592 3300005616 Bacteria 8408
55 Ga0068852_100006600 3300005616 Bacteria 8402
56 Ga0068859_100000710 3300005617 Bacteria 33516
57 Ga0068859_100017648 3300005617 Bacteria 7174
58 Ga0068864_100002568 3300005618 Bacteria 14986
59 Ga0068861_100015445 3300005719 Bacteria 5382
60 Ga0068851_10002449 3300005834 Bacteria 8146
61 Ga0068858_100000982 3300005842 Bacteria 29441
62 Ga0068858_100027294 3300005842 Bacteria 5305
63 Ga0068860_100000003 3300005843 Bacteria 575741
64 Ga0068860_100003982 3300005843 Bacteria 15150
65 Ga0068860_100020935 3300005843 Bacteria 6337
66 Ga0068862_100017065 3300005844 Bacteria 6040
67 Ga0081539_10000925 3300005985 Bacteria 55202
68 Ga0081539_10004116 3300005985 Bacteria 16574
69 Ga0097621_100001710 3300006237 Bacteria 15004
70 Ga0097621_100037362 3300006237 Bacteria 3890
71 Ga0068871_100001825 3300006358 Bacteria 14369
72 Ga0068871_100010922 3300006358 Bacteria 6650
73 Ga0068871_100030530 3300006358 Bacteria 4244
74 Ga0068871_100035328 3300006358 Bacteria 3971
75 Ga0075430_100001443 3300006846 Bacteria 19293
76 Ga0097620_100000710 3300006931 Bacteria 33516
77 Ga0097620_100017647 3300006931 Bacteria 7174
78 Ga0105240_10000339 3300009093 Bacteria 87543
79 Ga0105240_10001189 3300009093 Bacteria 45474
80 Ga0105240_10003157 3300009093 Bacteria 25925
81 Ga0105240_10007738 3300009093 Bacteria 15544
82 Ga0105240_10107261 3300009093 Unclassified 3387
83 Ga0111539_10026669 3300009094 Bacteria 7062
84 Ga0105247_10003316 3300009101 Bacteria 10547
85 Ga0114129_10001062 3300009147 Bacteria 36084
86 Ga0114129_10028723 3300009147 Bacteria 7881
87 Ga0105241_10000620 3300009174 Bacteria 26735
88 Ga0105241_10002367 3300009174 Bacteria 14165
89 Ga0105248_10006218 3300009177 Bacteria 13091
90 Ga0105237_10000144 3300009545 Bacteria 100105
91 Ga0105237_10003556 3300009545 Bacteria 18468
92 Ga0105237_10010471 3300009545 Bacteria 9856
93 Ga0105237_10012545 3300009545 Bacteria 8927
94 Ga0105237_10015841 3300009545 Bacteria 7841
95 Ga0105238_10009750 3300009551 Bacteria 9617
96 Ga0105249_10003654 3300009553 Bacteria 13283
97 Ga0105249_10004335 3300009553 Bacteria 12272
98 Ga0105249_10025641 3300009553 Bacteria 5309
99 Ga0105239_10000925 3300010375 Bacteria 41596
100 Ga0105239_10003012 3300010375 Bacteria 20995
101 Ga0105239_10006497 3300010375 Bacteria 13557
102 Ga0105239_10009614 3300010375 Bacteria 10878
103 Ga0105239_10010003 3300010375 Bacteria 10638
104 Ga0157373_10005946 3300013100 Bacteria 9126
105 Ga0157370_10000419 3300013104 Bacteria 53608
106 Ga0157370_10012201 3300013104 Bacteria 8930
107 Ga0157370_10017606 3300013104 Bacteria 7206
108 Ga0157369_10015255 3300013105 Bacteria 8669
109 Ga0157374_10000013 3300013296 Bacteria 461240
110 Ga0157374_10004016 3300013296 Bacteria 12369
111 Ga0157374_10006626 3300013296 Bacteria 9842
112 Ga0157378_10005785 3300013297 Bacteria 10835
113 Ga0163162_10002021 3300013306 Bacteria 19084
114 Ga0163162_10008963 3300013306 Bacteria 9728
115 Ga0163162_10014014 3300013306 Bacteria 7836
116 Ga0163162_10025216 3300013306 Bacteria 5876
117 Ga0163162_10029143 3300013306 Bacteria 5461
118 Ga0157372_10000667 3300013307 Bacteria 37793
119 Ga0157372_10014311 3300013307 Bacteria 8482
120 Ga0157375_10003108 3300013308 Bacteria 14407
121 Ga0157375_10004642 3300013308 Bacteria 11942
122 Ga0157375_10020473 3300013308 Bacteria 6045
123 Ga0157375_10024882 3300013308 Bacteria 5550
124 Ga0163163_10003232 3300014325 Bacteria 13820
125 Ga0157380_10017086 3300014326 Bacteria 5363
126 Ga0157377_10001276 3300014745 Bacteria 10773
127 Ga0157377_10019068 3300014745 Bacteria 3579
128 Ga0157379_10015063 3300014968 Bacteria 6783
129 Ga0157376_10000349 3300014969 Bacteria 30853
130 Ga0157376_10000583 3300014969 Bacteria 23527
131 Ga0157376_10004049 3300014969 Bacteria 10138
132 Ga0157376_10023998 3300014969 Bacteria 4783
133 Ga0163161_10009910 3300017792 Bacteria 6601
134 Ga0163161_10015958 3300017792 Bacteria 5241
135 Ga0207426_1000059 3300025302 Bacteria 363842
136 Ga0207656_10000967 3300025321 Bacteria 9400
137 Ga0207710_10001493 3300025900 Bacteria 11571
138 Ga0207680_10011561 3300025903 Bacteria 4465
139 Ga0207647_10000064 3300025904 Bacteria 82970
140 Ga0207645_10002848 3300025907 Bacteria 13412
141 Ga0207643_10003884 3300025908 Bacteria 8038
142 Ga0207654_10008395 3300025911 Bacteria 5217
143 Ga0207707_10018450 3300025912 Bacteria 6083
144 Ga0207707_10029775 3300025912 Bacteria 4775
145 Ga0207695_10000056 3300025913 Bacteria 382433
146 Ga0207695_10000066 3300025913 Bacteria 334103
147 Ga0207695_10000469 3300025913 Bacteria 87551
148 Ga0207695_10006255 3300025913 Bacteria 15499
149 Ga0207695_10013417 3300025913 Bacteria 9772
150 Ga0207695_10017119 3300025913 Bacteria 8450
151 Ga0207695_10022437 3300025913 Bacteria 7163
152 Ga0207671_10001502 3300025914 Bacteria 26900
153 Ga0207671_10001511 3300025914 Bacteria 26769
154 Ga0207671_10022871 3300025914 Bacteria 4719
155 Ga0207660_10020067 3300025917 Bacteria 4480
156 Ga0207657_10019907 3300025919 Bacteria 6359
157 Ga0207649_10001925 3300025920 Bacteria 11845
158 Ga0207652_10008177 3300025921 Bacteria 8401
159 Ga0207694_10007537 3300025924 Bacteria 8247
160 Ga0207644_10019219 3300025931 Unclassified 4631
161 Ga0207706_10003583 3300025933 Bacteria 14828
162 Ga0207706_10059094 3300025933 Bacteria 3377
163 Ga0207686_10000812 3300025934 Bacteria 19072
164 Ga0207669_10016407 3300025937 Bacteria 3762
165 Ga0207704_10005411 3300025938 Bacteria 5887
166 Ga0207689_10007344 3300025942 Bacteria 9667
167 Ga0207689_10011755 3300025942 Bacteria 7503
168 Ga0207689_10013083 3300025942 Bacteria 7084
169 Ga0207689_10014898 3300025942 Bacteria 6597
170 Ga0207689_10022623 3300025942 Bacteria 5281
171 Ga0207661_10001213 3300025944 Bacteria 17235
172 Ga0207661_10027126 3300025944 Bacteria 4373
173 Ga0207679_10001006 3300025945 Bacteria 18102
174 Ga0207667_10012892 3300025949 Bacteria 9605
175 Ga0207668_10000337 3300025972 Bacteria 30364
176 Ga0207658_10002343 3300025986 Bacteria 13914
177 Ga0207677_10002943 3300026023 Bacteria 8993
178 Ga0207703_10002226 3300026035 Bacteria 17002
179 Ga0207639_10008621 3300026041 Bacteria 6997
180 Ga0207639_10012680 3300026041 Bacteria 5878
181 Ga0207678_10007708 3300026067 Bacteria 9510
182 Ga0207641_10005468 3300026088 Bacteria 10835
183 Ga0207641_10015914 3300026088 Bacteria 6159
184 Ga0207641_10032895 3300026088 Bacteria 4307
185 Ga0207648_10000215 3300026089 Bacteria 62218
186 Ga0207648_10006269 3300026089 Bacteria 11837
187 Ga0207676_10001609 3300026095 Bacteria 16628
188 Ga0207674_10008324 3300026116 Bacteria 12000
189 Ga0207674_10015368 3300026116 Bacteria 8410
190 Ga0207674_10018580 3300026116 Bacteria 7550
191 Ga0207674_10021832 3300026116 Bacteria 6889
192 Ga0207675_100000153 3300026118 Bacteria 60593
193 Ga0207675_100003678 3300026118 Bacteria 14949
194 Ga0207683_10007649 3300026121 Bacteria 9250
195 Ga0207683_10035394 3300026121 Bacteria 4342
196 Ga0207698_10032572 3300026142 Bacteria 3778
197 Ga0268266_10000073 3300028379 Bacteria 232074
198 Ga0268264_10000063 3300028381 Bacteria 301702
199 Ga0268264_10011175 3300028381 Bacteria 7414
200 Ga0268264_10015977 3300028381 Bacteria 6150
201 Ga0307517_10008734 3300028786 Bacteria 14497
202 Ga0307515_10000001 3300028794 Bacteria 4259510
203 Ga0307511_10000181 3300030521 Bacteria 62420
204 Ga0265327_10000013 3300031251 Bacteria 519549
205 Ga0265327_10000452 3300031251 Bacteria 73846
206 Ga0265327_10005795 3300031251 Bacteria 10159
207 Ga0307516_10003216 3300031730 Bacteria 21192
208 Ga0307510_10000156 3300033180 Bacteria 56919
209 Ga0373937_0036577 3300036401 Bacteria 4474
210 Ga0436365_0188491 3300039437 Bacteria 6175
211 Ga0439457_000380 3300042014 Bacteria 12535
212 Ga0466969_0000190 3300044656 Bacteria 33133
213 Ga0466972_0000168 3300044658 Bacteria 51759
214 Ga0466972_0000676 3300044658 Bacteria 16399
215 Ga0466966_0004462 3300044684 Bacteria 9229
216 Ga0466968_0001851 3300044735 Bacteria 7645
217 Ga0466970_0001457 3300044765 Bacteria 11444
218 Ga0466957_0002034 3300044842 Bacteria 10786
219 Ga0466959_0000003 3300045049 Bacteria 285164
220 Ga0466959_0000488 3300045049 Bacteria 23122
221 Ga0495606_0006101 3300046507 Bacteria 11252
222 Ga0495630_0019246 3300046517 Bacteria 5018
223 Ga0495668_0000023 3300046616 Bacteria 363848
224 Ga0495611_0000061 3300046648 Bacteria 77533
225 Ga0495674_0058140 3300047319 Bacteria 3382
226 Ga0495672_0013289 3300047320 Bacteria 5687
227 Ga0495687_000040 3300047443 Bacteria 230786
228 Ga0495686_0018075 3300047472 Bacteria 4738
229 Ga0496101_0008503 3300048904 Bacteria 6709
230 Ga0501031_0006812 3300049568 Bacteria 7456
231 Ga0501034_0000004 3300049571 Bacteria 382255
232 Ga0501034_0006158 3300049571 Bacteria 12935
233 Ga0501036_0001446 3300049572 Bacteria 18239
234 Ga0501036_0037631 3300049572 Bacteria 4093
235 Ga0501037_0004345 3300049573 Bacteria 10286
236 Ga0501037_0024815 3300049573 Bacteria 4432
237 Ga0501038_0003270 3300049574 Bacteria 15111
238 Ga0501038_0027388 3300049574 Bacteria 5071
239 Ga0501043_0003849 3300049579 Bacteria 12332
240 Ga0501219_000166 3300049703 Bacteria 12148
241 Ga0501035_0023603 3300049822 Bacteria 5643
242 Ga0501044_0010038 3300049823 Bacteria 10290
243 Ga0501044_0011695 3300049823 Bacteria 9508
244 Ga0501284_00001 3300050005 Bacteria 261916
245 nmdc:mga05p37_482_c1 3300050507 Bacteria 43621
246 Ga0500578_0001568 3300053086 Bacteria 22320
247 Ga0500583_0000019 3300053092 Bacteria 130534
248 Ga0500562_000034 3300053108 Bacteria 83634
249 Ga0500642_0004161 3300053130 Bacteria 4483
250 Ga0500568_0000208 3300053139 Bacteria 51266
251 Ga0500616_0005798 3300053153 Bacteria 8293
252 Ga0500622_0001414 3300053156 Bacteria 19338
253 Ga0500622_0002343 3300053156 Bacteria 13790
254 Ga0500611_000001 3300053727 Bacteria 385744

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300014745 Ga0157377_10001276 Ga0157377_100012762 804
2 3300044842 Ga0466957_0002034 Ga0466957_0002034_8080_10776 807
3 3300009093 Ga0105240_10107261 Ga0105240_101072611 827
4 3300025908 Ga0207643_10003884 Ga0207643_100038842 881
5 3300005539 Ga0068853_100007624 Ga0068853_1000076243 926
6 3300013306 Ga0163162_10029143 Ga0163162_100291433 926
7 3300026041 Ga0207639_10008621 Ga0207639_100086213 926
8 3300009545 Ga0105237_10015841 Ga0105237_100158414 939
9 3300010375 Ga0105239_10009614 Ga0105239_100096145 939
10 3300005339 Ga0070660_100008792 Ga0070660_1000087925 944
11 3300005530 Ga0070679_100017147 Ga0070679_1000171474 944
12 3300025917 Ga0207660_10020067 Ga0207660_100200671 944
13 3300025919 Ga0207657_10019907 Ga0207657_100199074 944
14 3300025921 Ga0207652_10008177 Ga0207652_100081772 944
15 3300025913 Ga0207695_10013417 Ga0207695_100134173 945
16 3300031251 Ga0265327_10005795 Ga0265327_100057952 949
17 3300044658 Ga0466972_0000168 Ga0466972_0000168_29326_32475 951
18 3300044765 Ga0466970_0001457 Ga0466970_0001457_3058_6207 951
19 3300047472 Ga0495686_0018075 Ga0495686_0018075_319_3495 957
20 3300013306 Ga0163162_10008963 Ga0163162_100089636 959
21 3300025913 Ga0207695_10000469 Ga0207695_100004699 959
22 3300025937 Ga0207669_10016407 Ga0207669_100164071 959
23 3300046616 Ga0495668_0000023 Ga0495668_0000023_232935_236090 959
24 3300049571 Ga0501034_0000004 Ga0501034_0000004_167831_171001 959
25 3300053130 Ga0500642_0004161 Ga0500642_0004161_1396_4467 961
26 3300039437 Ga0436365_0188491 Ga0436365_0188491_2218_5379 964
27 3300003354 JGI25160J50197_1003608 JGI25160J50197_10036085 965
28 3300025302 Ga0207426_1000059 Ga0207426_1000059240 965
29 3300031251 Ga0265327_10000452 Ga0265327_100004525 965
30 3300005338 Ga0068868_100003237 Ga0068868_1000032372 967
31 3300013306 Ga0163162_10002021 Ga0163162_1000202118 967
32 3300026089 Ga0207648_10006269 Ga0207648_1000626910 967
33 3300005295 Ga0065707_10086829 Ga0065707_100868293 968
34 3300005340 Ga0070689_100006347 Ga0070689_1000063475 968
35 3300005353 Ga0070669_100007009 Ga0070669_1000070094 968
36 3300005354 Ga0070675_100008308 Ga0070675_1000083085 968
37 3300005564 Ga0070664_100007908 Ga0070664_1000079081 968
38 3300005617 Ga0068859_100000710 Ga0068859_10000071014 968
39 3300005834 Ga0068851_10002449 Ga0068851_100024494 968
40 3300006931 Ga0097620_100000710 Ga0097620_10000071014 968
41 3300009094 Ga0111539_10026669 Ga0111539_100266695 968
42 3300009553 Ga0105249_10003654 Ga0105249_100036545 968
43 3300026116 Ga0207674_10015368 Ga0207674_100153682 968
44 3300026118 Ga0207675_100000153 Ga0207675_1000001536 968
45 3300005366 Ga0070659_100003036 Ga0070659_10000303610 969
46 3300025904 Ga0207647_10000064 Ga0207647_1000006436 969
47 3300005367 Ga0070667_100010943 Ga0070667_1000109432 970
48 3300005539 Ga0068853_100012961 Ga0068853_1000129613 970
49 3300026041 Ga0207639_10012680 Ga0207639_100126802 970
50 3300005458 Ga0070681_10004855 Ga0070681_100048555 971
51 3300013308 Ga0157375_10024882 Ga0157375_100248823 971
52 3300014968 Ga0157379_10015063 Ga0157379_100150635 971
53 3300025912 Ga0207707_10029775 Ga0207707_100297752 971
54 3300044656 Ga0466969_0000190 Ga0466969_0000190_4486_7710 971
55 3300044658 Ga0466972_0000676 Ga0466972_0000676_509_3697 971
56 3300044684 Ga0466966_0004462 Ga0466966_0004462_1493_4717 971
57 3300045049 Ga0466959_0000003 Ga0466959_0000003_133635_136859 971
58 3300005335 Ga0070666_10019394 Ga0070666_100193942 972
59 3300005337 Ga0070682_100008995 Ga0070682_1000089953 972
60 3300005341 Ga0070691_10010460 Ga0070691_100104602 972
61 3300005347 Ga0070668_100004302 Ga0070668_1000043022 972
62 3300005364 Ga0070673_100000996 Ga0070673_1000009968 972
63 3300005458 Ga0070681_10018077 Ga0070681_100180772 972
64 3300005459 Ga0068867_100001595 Ga0068867_1000015953 972
65 3300005530 Ga0070679_100015550 Ga0070679_1000155502 972
66 3300005547 Ga0070693_100010915 Ga0070693_1000109152 972
67 3300005548 Ga0070665_100003483 Ga0070665_10000348313 972
68 3300005719 Ga0068861_100015445 Ga0068861_1000154453 972
69 3300005842 Ga0068858_100000982 Ga0068858_10000098220 972
70 3300009093 Ga0105240_10001189 Ga0105240_100011892 972
71 3300009553 Ga0105249_10025641 Ga0105249_100256412 972
72 3300014969 Ga0157376_10000583 Ga0157376_1000058319 972
73 3300025321 Ga0207656_10000967 Ga0207656_100009677 972
74 3300025903 Ga0207680_10011561 Ga0207680_100115612 972
75 3300025912 Ga0207707_10018450 Ga0207707_100184503 972
76 3300025913 Ga0207695_10017119 Ga0207695_100171194 972
77 3300025938 Ga0207704_10005411 Ga0207704_100054113 972
78 3300025972 Ga0207668_10000337 Ga0207668_1000033717 972
79 3300025986 Ga0207658_10002343 Ga0207658_100023433 972
80 3300026023 Ga0207677_10002943 Ga0207677_100029435 972
81 3300026035 Ga0207703_10002226 Ga0207703_1000222613 972
82 3300026088 Ga0207641_10005468 Ga0207641_100054683 972
83 3300013308 Ga0157375_10020473 Ga0157375_100204732 974
84 3300025942 Ga0207689_10022623 Ga0207689_100226232 974
85 3300013296 Ga0157374_10000013 Ga0157374_10000013308 976
86 3300014969 Ga0157376_10000349 Ga0157376_1000034927 976
87 3300014969 Ga0157376_10023998 Ga0157376_100239982 976
88 3300053092 Ga0500583_0000019 Ga0500583_0000019_76585_79758 977
89 3300005338 Ga0068868_100034938 Ga0068868_1000349382 978
90 3300005347 Ga0070668_100046310 Ga0070668_1000463101 978
91 3300025944 Ga0207661_10027126 Ga0207661_100271262 978
92 3300009147 Ga0114129_10001062 Ga0114129_1000106225 979
93 3300009174 Ga0105241_10000620 Ga0105241_1000062011 979
94 3300013104 Ga0157370_10000419 Ga0157370_1000041926 979
95 3300050507 nmdc:mga05p37_482_c1 nmdc:mga05p37_482_c1_34771_37992 979
96 3300006358 Ga0068871_100010922 Ga0068871_1000109223 980
97 iso_pu_bacteria 2929154850 2929159737 980
98 3300009093 Ga0105240_10007738 Ga0105240_100077382 981
99 3300009174 Ga0105241_10002367 Ga0105241_100023679 981
100 3300025913 Ga0207695_10006255 Ga0207695_1000625515 981
101 3300025914 Ga0207671_10001502 Ga0207671_100015023 981
102 3300047443 Ga0495687_000040 Ga0495687_000040_192195_195365 981
103 3300005337 Ga0070682_100000041 Ga0070682_10000004117 982
104 3300042014 Ga0439457_000380 Ga0439457_000380_4214_7393 983
105 iso_pu_bacteria 2818991444 2819585586 983
106 3300005438 Ga0070701_10016385 Ga0070701_100163852 984
107 3300013297 Ga0157378_10005785 Ga0157378_100057852 984
108 3300013306 Ga0163162_10014014 Ga0163162_100140144 984
109 3300014745 Ga0157377_10019068 Ga0157377_100190682 984
110 3300026121 Ga0207683_10035394 Ga0207683_100353942 984
111 3300053108 Ga0500562_000034 Ga0500562_000034_9600_12749 984
112 iso_pu_bacteria 2738541278 2738725029 984
113 3300005328 Ga0070676_10012487 Ga0070676_100124872 985
114 3300005338 Ga0068868_100017209 Ga0068868_1000172092 985
115 3300005355 Ga0070671_100018227 Ga0070671_1000182273 985
116 3300005364 Ga0070673_100029208 Ga0070673_1000292082 985
117 3300005367 Ga0070667_100018884 Ga0070667_1000188843 985
118 3300005457 Ga0070662_100008691 Ga0070662_1000086911 985
119 3300005578 Ga0068854_100015340 Ga0068854_1000153401 985
120 3300005616 Ga0068852_100006600 Ga0068852_1000066008 985
121 3300005843 Ga0068860_100003982 Ga0068860_1000039824 985
122 3300005844 Ga0068862_100017065 Ga0068862_1000170653 985
123 3300013100 Ga0157373_10005946 Ga0157373_100059464 985
124 3300013296 Ga0157374_10006626 Ga0157374_100066262 985
125 3300013308 Ga0157375_10004642 Ga0157375_100046425 985
126 3300017792 Ga0163161_10009910 Ga0163161_100099104 985
127 3300025933 Ga0207706_10003583 Ga0207706_100035835 985
128 3300025942 Ga0207689_10007344 Ga0207689_100073444 985
129 3300026121 Ga0207683_10007649 Ga0207683_100076496 985
130 3300053139 Ga0500568_0000208 Ga0500568_0000208_28594_31749 985
131 3300005329 Ga0070683_100002633 Ga0070683_1000026332 986
132 3300005340 Ga0070689_100015795 Ga0070689_1000157951 986
133 3300005344 Ga0070661_100002223 Ga0070661_1000022234 986
134 3300005535 Ga0070684_100011378 Ga0070684_1000113781 986
135 3300005617 Ga0068859_100017648 Ga0068859_1000176484 986
136 3300005618 Ga0068864_100002568 Ga0068864_10000256811 986
137 3300005842 Ga0068858_100027294 Ga0068858_1000272942 986
138 3300005843 Ga0068860_100020935 Ga0068860_1000209354 986
139 3300006358 Ga0068871_100030530 Ga0068871_1000305302 986
140 3300006931 Ga0097620_100017647 Ga0097620_1000176472 986
141 3300009101 Ga0105247_10003316 Ga0105247_100033167 986
142 3300013296 Ga0157374_10004016 Ga0157374_100040168 986
143 3300013306 Ga0163162_10025216 Ga0163162_100252164 986
144 3300025900 Ga0207710_10001493 Ga0207710_100014933 986
145 3300025933 Ga0207706_10059094 Ga0207706_100590941 986
146 3300026067 Ga0207678_10007708 Ga0207678_100077083 986
147 3300026095 Ga0207676_10001609 Ga0207676_100016097 986
148 3300026116 Ga0207674_10021832 Ga0207674_100218322 986
149 3300026118 Ga0207675_100003678 Ga0207675_1000036786 986
150 3300028381 Ga0268264_10015977 Ga0268264_100159774 986
151 3300028794 Ga0307515_10000001 Ga0307515_100000012410 986
152 3300036401 Ga0373937_0036577 Ga0373937_0036577_526_3669 986
153 3300053156 Ga0500622_0001414 Ga0500622_0001414_11382_14540 986
154 3300005329 Ga0070683_100018422 Ga0070683_1000184222 987
155 3300005339 Ga0070660_100043308 Ga0070660_1000433081 987
156 3300005539 Ga0068853_100027331 Ga0068853_1000273312 987
157 3300005985 Ga0081539_10000925 Ga0081539_1000092511 987
158 3300005985 Ga0081539_10004116 Ga0081539_1000411610 987
159 3300006237 Ga0097621_100037362 Ga0097621_1000373622 987
160 3300006358 Ga0068871_100035328 Ga0068871_1000353282 987
161 3300013105 Ga0157369_10015255 Ga0157369_100152552 987
162 3300014326 Ga0157380_10017086 Ga0157380_100170863 987
163 3300025907 Ga0207645_10002848 Ga0207645_100028485 987
164 3300025942 Ga0207689_10011755 Ga0207689_100117555 987
165 3300025942 Ga0207689_10014898 Ga0207689_100148984 987
166 3300026089 Ga0207648_10000215 Ga0207648_100002159 987
167 3300031251 Ga0265327_10000013 Ga0265327_10000013214 987
168 3300046517 Ga0495630_0019246 Ga0495630_0019246_273_3419 987
169 3300047319 Ga0495674_0058140 Ga0495674_0058140_65_3211 987
170 3300047320 Ga0495672_0013289 Ga0495672_0013289_1204_4359 987
171 3300005293 Ga0065715_10008177 Ga0065715_100081771 988
172 3300005329 Ga0070683_100001981 Ga0070683_10000198111 988
173 3300005354 Ga0070675_100027972 Ga0070675_1000279722 988
174 3300005471 Ga0070698_100002009 Ga0070698_1000020095 988
175 3300005539 Ga0068853_100007735 Ga0068853_1000077355 988
176 3300005577 Ga0068857_100009430 Ga0068857_1000094305 988
177 3300006846 Ga0075430_100001443 Ga0075430_1000014439 988
178 3300009147 Ga0114129_10028723 Ga0114129_100287235 988
179 3300009553 Ga0105249_10004335 Ga0105249_100043355 988
180 3300025920 Ga0207649_10001925 Ga0207649_100019254 988
181 3300025934 Ga0207686_10000812 Ga0207686_1000081216 988
182 3300025942 Ga0207689_10013083 Ga0207689_100130833 988
183 3300025944 Ga0207661_10001213 Ga0207661_100012136 988
184 3300025945 Ga0207679_10001006 Ga0207679_100010067 988
185 3300026088 Ga0207641_10032895 Ga0207641_100328952 988
186 3300026116 Ga0207674_10008324 Ga0207674_100083246 988
187 3300049571 Ga0501034_0006158 Ga0501034_0006158_3758_6919 988
188 3300049572 Ga0501036_0037631 Ga0501036_0037631_597_3758 988
189 3300049573 Ga0501037_0004345 Ga0501037_0004345_3565_6726 988
190 3300049574 Ga0501038_0027388 Ga0501038_0027388_883_4044 988
191 3300049703 Ga0501219_000166 Ga0501219_000166_928_4095 988
192 3300049822 Ga0501035_0023603 Ga0501035_0023603_882_4043 988
193 3300049823 Ga0501044_0011695 Ga0501044_0011695_3696_6857 988
194 3300050005 Ga0501284_00001 Ga0501284_00001_113003_116170 988
195 3300053153 Ga0500616_0005798 Ga0500616_0005798_1058_4231 988
196 3300044735 Ga0466968_0001851 Ga0466968_0001851_1810_4980 989
197 3300049568 Ga0501031_0006812 Ga0501031_0006812_2171_5341 989
198 3300049572 Ga0501036_0001446 Ga0501036_0001446_381_3551 989
199 3300049573 Ga0501037_0024815 Ga0501037_0024815_1104_4274 989
200 3300049574 Ga0501038_0003270 Ga0501038_0003270_1597_4767 989
201 3300049579 Ga0501043_0003849 Ga0501043_0003849_5113_8283 989
202 3300049823 Ga0501044_0010038 Ga0501044_0010038_6973_10143 989
203 3300053727 Ga0500611_000001 Ga0500611_000001_143718_146879 989
204 3300009093 Ga0105240_10003157 Ga0105240_1000315712 990
205 3300025913 Ga0207695_10000066 Ga0207695_10000066287 990
206 3300005577 Ga0068857_100006684 Ga0068857_1000066845 991
207 3300005578 Ga0068854_100030789 Ga0068854_1000307891 991
208 3300005616 Ga0068852_100006592 Ga0068852_1000065925 991
209 3300009551 Ga0105238_10009750 Ga0105238_100097503 991
210 3300013104 Ga0157370_10012201 Ga0157370_100122015 991
211 3300013104 Ga0157370_10017606 Ga0157370_100176062 991
212 3300013307 Ga0157372_10014311 Ga0157372_100143111 991
213 3300025913 Ga0207695_10000056 Ga0207695_10000056302 991
214 3300025913 Ga0207695_10022437 Ga0207695_100224373 991
215 3300025924 Ga0207694_10007537 Ga0207694_100075374 991
216 3300025949 Ga0207667_10012892 Ga0207667_100128923 991
217 3300026116 Ga0207674_10018580 Ga0207674_100185803 991
218 3300026142 Ga0207698_10032572 Ga0207698_100325722 991
219 3300005548 Ga0070665_100000002 Ga0070665_100000002621 992
220 3300028379 Ga0268266_10000073 Ga0268266_10000073186 992
221 3300005355 Ga0070671_100004817 Ga0070671_1000048175 993
222 3300006237 Ga0097621_100001710 Ga0097621_1000017108 993
223 3300006358 Ga0068871_100001825 Ga0068871_1000018258 993
224 3300009093 Ga0105240_10000339 Ga0105240_100003399 993
225 3300009177 Ga0105248_10006218 Ga0105248_100062185 993
226 3300009545 Ga0105237_10000144 Ga0105237_1000014410 993
227 3300009545 Ga0105237_10010471 Ga0105237_100104712 993
228 3300010375 Ga0105239_10000925 Ga0105239_1000092547 993
229 3300010375 Ga0105239_10006497 Ga0105239_100064973 993
230 3300010375 Ga0105239_10010003 Ga0105239_100100032 993
231 3300013307 Ga0157372_10000667 Ga0157372_1000066714 993
232 3300013308 Ga0157375_10003108 Ga0157375_100031086 993
233 3300014325 Ga0163163_10003232 Ga0163163_100032327 993
234 3300014969 Ga0157376_10004049 Ga0157376_100040491 993
235 3300017792 Ga0163161_10015958 Ga0163161_100159582 993
236 3300025911 Ga0207654_10008395 Ga0207654_100083952 993
237 3300025914 Ga0207671_10001511 Ga0207671_1000151114 993
238 3300025931 Ga0207644_10019219 Ga0207644_100192192 993
239 3300026088 Ga0207641_10015914 Ga0207641_100159142 993
240 3300031730 Ga0307516_10003216 Ga0307516_100032169 993
241 3300033180 Ga0307510_10000156 Ga0307510_100001568 993
242 3300045049 Ga0466959_0000488 Ga0466959_0000488_16931_20095 993
243 3300046648 Ga0495611_0000061 Ga0495611_0000061_63063_66224 993
244 3300048904 Ga0496101_0008503 Ga0496101_0008503_2171_5401 993
245 3300053086 Ga0500578_0001568 Ga0500578_0001568_7867_11055 993
246 3300003320 rootH2_10007161 rootH2_1000716139 995
247 3300005843 Ga0068860_100000003 Ga0068860_100000003242 995
248 3300009545 Ga0105237_10003556 Ga0105237_1000355610 995
249 3300009545 Ga0105237_10012545 Ga0105237_100125452 995
250 3300010375 Ga0105239_10003012 Ga0105239_1000301213 995
251 3300025914 Ga0207671_10022871 Ga0207671_100228712 995
252 3300028381 Ga0268264_10000063 Ga0268264_10000063160 995
253 3300028381 Ga0268264_10011175 Ga0268264_100111753 995
254 3300028786 Ga0307517_10008734 Ga0307517_100087348 995
255 3300030521 Ga0307511_10000181 Ga0307511_1000018136 995
256 3300046507 Ga0495606_0006101 Ga0495606_0006101_1077_4292 995
257 3300053156 Ga0500622_0002343 Ga0500622_0002343_10104_13277 995

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00580

UvrD-helicase

UvrD/REP helicase N-terminal domain

29

338

0.9

PF13245

AAA_19

AAA domain

33

323

0.86

PF12684

DUF3799

PDDEXK-like domain of unknown function (DUF3799)

816

1064

0.74

PF12705

PDDEXK_1

PD-(D/E)XK nuclease superfamily

814

1068

0.74

PF13361

UvrD_C

UvrD-like helicase C-terminal domain

344

747

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6vsx-assembly1.cif.gz_A x-ray crystal structure of the c-terminal domain of bacillus subtilis rna polymerase binding helicase held 0.786 285 683
3dmn-assembly1.cif.gz_A the crystal structure of the c-terminal domain of a possilbe dna helicase from lactobacillus plantarun wcfs1 0.7819 284 684
6vsx-assembly1.cif.gz_A x-ray crystal structure of the c-terminal domain of bacillus subtilis rna polymerase binding helicase held 0.7815 285 683
3dmn-assembly1.cif.gz_A the crystal structure of the c-terminal domain of a possilbe dna helicase from lactobacillus plantarun wcfs1 0.7598 284 684
6z6d-assembly1.cif.gz_A crystal structure of the hk97 bacteriophage large terminase 0.7113 19 86
ID Description Score Start End Superfamily
af_A0A1D6GCN3_1_145_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9304 339 380 3.40.50.300
2is1B03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8655 282 685 3.40.50.300
2is1B03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8569 282 685 3.40.50.300
2is1A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8295 13 280 3.40.50.300
4c30F04 Mainly Alpha;Orthogonal Bundle;PCRA; domain 4;PCRA; domain 4 0.8221 395 561 1.10.486.10
ID Description Score Start End GO Terms
AF-A0A4V1TV05-F1-model_v4 deleted 0.9081 12 117
AF-A0A2E4PR10-F1-model_v4 UvrD-like helicase ATP-binding domain-containing protein 0.9032 11 110 GO:0003677
GO:0005524
GO:0009378
GO:0016787
GO:0036121
GO:0061749
GO:1990518
AF-W1V3G0-F1-model_v4 UvrD/REP helicase 0.8895 19 110 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009378
GO:0016787
GO:0033202
GO:0036121
GO:0061749
GO:1990518
AF-A0A382KPA1-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.8887 193 611 GO:0000725
GO:0003677
GO:0005524
GO:0009378
GO:0016787
GO:0016853
GO:0036121
GO:0061749
GO:1990518
AF-A0A7V9EBW9-F1-model_v4 UvrD-helicase domain-containing protein 0.8846 19 106 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0016787
GO:0033202
GO:0043138

Feature Viewer

pLDDT pTM Quality
77.88 0.55 Medium
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Predicted Structure (AlphaFold2)

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