F367274

General Info

Members Datasets Scaffolds Average Seq Length
257 159 514 428

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10054699|Ga0105248_100546993
Length 439
Sequence MGFATSQQDIHIAVIGLGYVGCVTAACFSQLGHRVTGVDRDVYKTEKVQAGEAPFFEPGLEAAVRSGVESGKLTATTSTEAALHDADVALLCVGTPSERNGNLGLDQLRRVVQEIRDHLPARAGKPLIVAVRSTVFPGTCEEIVESQLAEFSNVDVVSNPEFLREGTAMRDFIEPALVVVGGSNPAAVQRVASLYAPLHLDPCLVSLRTAEMIKYACNAFHAVKICFANEIGALSERLGVDGHEVMQTFCRDTRLNISPAYLRPGFSFGGSCLPKDLRALVYRASRLDIELPLLASAMPSNNAHLKRAVDAVLSTGARRIGVLGLTFKENTDDLRESPVITMLEFLIGKGLDVRIYDPHISVDSIYGSNRDFLLNAIPHIGRLLVSAPSAVTSWADYLVVTQRPPAAVLAAIEGSGLPVLDVAGVLAKAKQPAGVQAAV

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
82 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
94 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
102 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
103 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
106 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
107 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
110 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
123 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
146 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
147 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
148 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.61
Metatranscriptomes 0.39
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.78
Rhizosphere 93.39
Stem 0
Stem Tuber 0
Unclassified 10.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10054699 3300009177 Unclassified 4476
2 Ga0070658_10106438 3300005327 Bacteria 2320
3 Ga0070683_100053198 3300005329 Bacteria 3752
4 Ga0070683_100202609 3300005329 Bacteria 1884
5 Ga0070666_10026782 3300005335 Unclassified 3770
6 Ga0070680_100082336 3300005336 Unclassified 2656
7 Ga0068868_100001696 3300005338 Bacteria 15078
8 Ga0070660_100177676 3300005339 Unclassified 1722
9 Ga0070714_100009509 3300005435 Bacteria 7646
10 Ga0070713_100004551 3300005436 Bacteria 9345
11 Ga0070713_100016639 3300005436 Bacteria 5533
12 Ga0070711_100055096 3300005439 Bacteria 2746
13 Ga0070708_100155664 3300005445 Bacteria 2128
14 Ga0070678_100085864 3300005456 Bacteria 2399
15 Ga0070662_100070744 3300005457 Bacteria 2571
16 Ga0070681_10006677 3300005458 Bacteria 11226
17 Ga0070681_10099917 3300005458 Unclassified 2847
18 Ga0068867_100019457 3300005459 Bacteria 4837
19 Ga0068867_100054218 3300005459 Bacteria 2962
20 Ga0070685_10029012 3300005466 Bacteria 3071
21 Ga0070679_100053931 3300005530 Unclassified 4003
22 Ga0070679_100084732 3300005530 Unclassified 3157
23 Ga0068853_100125408 3300005539 Bacteria 2293
24 Ga0070693_100073331 3300005547 Bacteria 2022
25 Ga0070704_100018370 3300005549 Bacteria 4471
26 Ga0068855_100018827 3300005563 Bacteria 8300
27 Ga0068857_100009524 3300005577 Bacteria 8435
28 Ga0068857_100009525 3300005577 Bacteria 8434
29 Ga0068856_100037955 3300005614 Unclassified 4727
30 Ga0068858_100009978 3300005842 Bacteria 9019
31 Ga0068860_100002177 3300005843 Bacteria 20607
32 Ga0068860_100055824 3300005843 Bacteria 3755
33 Ga0068860_100175160 3300005843 Bacteria 2073
34 Ga0081539_10000582 3300005985 Bacteria 75018
35 Ga0097621_100002841 3300006237 Bacteria 11878
36 Ga0097621_100027435 3300006237 Bacteria 4478
37 Ga0097621_100045610 3300006237 Bacteria 3541
38 Ga0068871_100001446 3300006358 Bacteria 15886
39 Ga0068871_100004819 3300006358 Bacteria 9430
40 Ga0068871_100275993 3300006358 Bacteria 1469
41 Ga0075430_100002773 3300006846 Bacteria 14642
42 Ga0075434_100033598 3300006871 Bacteria 5064
43 Ga0075434_100266016 3300006871 Bacteria 1734
44 Ga0068865_100000915 3300006881 Bacteria 16733
45 Ga0068865_100003425 3300006881 Bacteria 9491
46 Ga0075435_100173071 3300007076 Bacteria 1822
47 Ga0105240_10000394 3300009093 Bacteria 81599
48 Ga0105240_10000408 3300009093 Bacteria 79917
49 Ga0105240_10033161 3300009093 Bacteria 6675
50 Ga0105240_10101329 3300009093 Bacteria 3502
51 Ga0105240_10135229 3300009093 Bacteria 2952
52 Ga0105240_10181530 3300009093 Bacteria 2483
53 Ga0111539_10005781 3300009094 Bacteria 15985
54 Ga0105245_10000103 3300009098 Bacteria 81617
55 Ga0105245_10003495 3300009098 Bacteria 14062
56 Ga0114129_10566334 3300009147 Bacteria 1476
57 Ga0105241_10000629 3300009174 Bacteria 26542
58 Ga0105241_10057670 3300009174 Bacteria 2980
59 Ga0105241_10092358 3300009174 Unclassified 2390
60 Ga0105241_10128788 3300009174 Unclassified 2047
61 Ga0105242_10000408 3300009176 Bacteria 34230
62 Ga0105242_10001806 3300009176 Bacteria 16868
63 Ga0105242_10018331 3300009176 Bacteria 5471
64 Ga0105242_10032293 3300009176 Bacteria 4186
65 Ga0105242_10127370 3300009176 Bacteria 2193
66 Ga0105242_10128300 3300009176 Bacteria 2185
67 Ga0105242_10224787 3300009176 Bacteria 1679
68 Ga0105248_10007431 3300009177 Bacteria 12022
69 Ga0105248_10014595 3300009177 Bacteria 8646
70 Ga0105248_10093247 3300009177 Bacteria 3391
71 Ga0105248_10296226 3300009177 Bacteria 1821
72 Ga0105237_10004471 3300009545 Bacteria 16165
73 Ga0105237_10011944 3300009545 Bacteria 9179
74 Ga0105237_10012357 3300009545 Bacteria 8996
75 Ga0105237_10018965 3300009545 Bacteria 7108
76 Ga0105237_10060282 3300009545 Bacteria 3796
77 Ga0105238_10002066 3300009551 Bacteria 20267
78 Ga0105238_10017284 3300009551 Bacteria 7328
79 Ga0105238_10026275 3300009551 Bacteria 5934
80 Ga0105238_10036509 3300009551 Unclassified 4996
81 Ga0105238_10192805 3300009551 Bacteria 2013
82 Ga0105249_10003850 3300009553 Bacteria 12954
83 Ga0105249_10401211 3300009553 Bacteria 1401
84 Ga0105239_10005641 3300010375 Bacteria 14626
85 Ga0105239_10007133 3300010375 Bacteria 12855
86 Ga0105239_10011044 3300010375 Bacteria 10083
87 Ga0105246_10004968 3300011119 Bacteria 8097
88 Ga0157370_10002474 3300013104 Bacteria 22291
89 Ga0157370_10094518 3300013104 Bacteria 2804
90 Ga0157369_10035771 3300013105 Bacteria 5444
91 Ga0157369_10051206 3300013105 Unclassified 4468
92 Ga0157369_10125575 3300013105 Unclassified 2721
93 Ga0157369_10173531 3300013105 Bacteria 2271
94 Ga0157369_10331954 3300013105 Unclassified 1580
95 Ga0157374_10003888 3300013296 Bacteria 12540
96 Ga0157374_10049550 3300013296 Bacteria 3902
97 Ga0157374_10291080 3300013296 Bacteria 1614
98 Ga0157378_10002402 3300013297 Bacteria 16643
99 Ga0157378_10002405 3300013297 Bacteria 16637
100 Ga0157372_10010752 3300013307 Bacteria 9743
101 Ga0157375_10014528 3300013308 Bacteria 7027
102 Ga0157375_10201232 3300013308 Bacteria 2148
103 Ga0163163_10008653 3300014325 Bacteria 9052
104 Ga0163163_10064036 3300014325 Bacteria 3648
105 Ga0163163_10084097 3300014325 Bacteria 3188
106 Ga0163163_10088221 3300014325 Bacteria 3113
107 Ga0163163_10436300 3300014325 Bacteria 1369
108 Ga0157379_10001659 3300014968 Bacteria 18393
109 Ga0157376_10078902 3300014969 Bacteria 2821
110 Ga0213875_10000056 3300021388 Bacteria 136543
111 Ga0213875_10000108 3300021388 Bacteria 94421
112 Ga0213875_10009815 3300021388 Bacteria 4828
113 Ga0207699_10184820 3300025906 Unclassified 1403
114 Ga0207707_10001648 3300025912 Bacteria 20601
115 Ga0207707_10065070 3300025912 Unclassified 3176
116 Ga0207695_10003294 3300025913 Bacteria 22929
117 Ga0207695_10186536 3300025913 Bacteria 1993
118 Ga0207671_10008574 3300025914 Bacteria 8646
119 Ga0207671_10012493 3300025914 Bacteria 6822
120 Ga0207671_10181850 3300025914 Bacteria 1636
121 Ga0207663_10054799 3300025916 Bacteria 2499
122 Ga0207660_10028337 3300025917 Unclassified 3830
123 Ga0207660_10083375 3300025917 Bacteria 2354
124 Ga0207652_10020459 3300025921 Bacteria 5449
125 Ga0207652_10091489 3300025921 Unclassified 2675
126 Ga0207694_10008103 3300025924 Bacteria 7941
127 Ga0207687_10000599 3300025927 Bacteria 24428
128 Ga0207687_10005492 3300025927 Bacteria 8385
129 Ga0207700_10002657 3300025928 Bacteria 10298
130 Ga0207700_10152069 3300025928 Bacteria 1913
131 Ga0207664_10002538 3300025929 Bacteria 12071
132 Ga0207686_10018082 3300025934 Bacteria 3984
133 Ga0207686_10039145 3300025934 Bacteria 2875
134 Ga0207709_10031941 3300025935 Unclassified 3080
135 Ga0207704_10001565 3300025938 Bacteria 10253
136 Ga0207704_10048739 3300025938 Bacteria 2542
137 Ga0207704_10052067 3300025938 Bacteria 2480
138 Ga0207711_10013820 3300025941 Bacteria 6702
139 Ga0207711_10161148 3300025941 Bacteria 2030
140 Ga0207661_10022680 3300025944 Bacteria 4732
141 Ga0207667_10089164 3300025949 Bacteria 3188
142 Ga0207667_10119980 3300025949 Bacteria 2710
143 Ga0207658_10052708 3300025986 Unclassified 3003
144 Ga0207677_10015736 3300026023 Bacteria 4461
145 Ga0207703_10040210 3300026035 Bacteria 3741
146 Ga0207703_10132425 3300026035 Bacteria 2155
147 Ga0207702_10165344 3300026078 Bacteria 2023
148 Ga0207641_10032894 3300026088 Bacteria 4308
149 Ga0207648_10045839 3300026089 Bacteria 3834
150 Ga0207674_10000372 3300026116 Bacteria 58411
151 Ga0207674_10001088 3300026116 Bacteria 35350
152 Ga0207674_10014810 3300026116 Bacteria 8602
153 Ga0207683_10100310 3300026121 Bacteria 2585
154 Ga0268264_10017753 3300028381 Bacteria 5825
155 Ga0268264_10018088 3300028381 Bacteria 5765
156 Ga0268264_10086803 3300028381 Bacteria 2689
157 Ga0268264_10110081 3300028381 Bacteria 2411
158 Ga0265314_10000816 3300031711 Bacteria 37040
159 Ga0307413_10093485 3300031824 Bacteria 1966
160 Ga0373934_0000490 3300035086 Bacteria 13887
161 Ga0373927_0006105 3300035695 Bacteria 8252
162 Ga0373927_0050270 3300035695 Bacteria 2695
163 Ga0373947_0001737 3300035725 Bacteria 13325
164 Ga0373947_0112766 3300035725 Bacteria 1720
165 Ga0373937_0002954 3300036401 Bacteria 14224
166 Ga0373937_0157974 3300036401 Bacteria 2126
167 Ga0373925_0000166 3300037068 Bacteria 71445
168 Ga0436364_0104807 3300037853 Bacteria 3360
169 Ga0436364_0115933 3300037853 Bacteria 94405
170 Ga0436364_0196389 3300037853 Bacteria 74609
171 Ga0436364_0228583 3300037853 Bacteria 5771
172 Ga0436364_0596040 3300037853 Bacteria 10449
173 Ga0436364_0608309 3300037853 Bacteria 4489
174 Ga0436364_0657423 3300037853 Bacteria 7043
175 Ga0436364_0778800 3300037853 Unclassified 3968
176 Ga0436364_1110019 3300037853 Unclassified 1567
177 Ga0436365_0546481 3300039437 Unclassified 2354
178 Ga0436365_1351326 3300039437 Bacteria 1580
179 Ga0495651_0062645 3300046462 Bacteria 2845
180 Ga0495653_0157450 3300046463 Bacteria 1580
181 Ga0495580_0000955 3300046472 Bacteria 25312
182 Ga0495582_0010388 3300046473 Bacteria 5122
183 Ga0495662_0022559 3300046476 Bacteria 3039
184 Ga0495664_0033622 3300046477 Bacteria 3013
185 Ga0495608_0094428 3300046511 Bacteria 1932
186 Ga0495618_0066738 3300046514 Bacteria 2287
187 Ga0495628_0042760 3300046516 Bacteria 3612
188 Ga0495630_0077530 3300046517 Bacteria 2505
189 Ga0495652_0031610 3300046529 Bacteria 4635
190 Ga0495652_0118530 3300046529 Bacteria 2115
191 Ga0495640_0022614 3300046533 Bacteria 4592
192 Ga0495586_0041291 3300046535 Unclassified 2484
193 Ga0495587_0018179 3300046536 Bacteria 4360
194 Ga0495645_0052454 3300046543 Bacteria 2967
195 Ga0495645_0076834 3300046543 Bacteria 2401
196 Ga0495667_0002274 3300046559 Bacteria 12866
197 Ga0495667_0038764 3300046559 Bacteria 3172
198 Ga0495634_0068968 3300046642 Bacteria 2334
199 Ga0495635_0165219 3300046663 Bacteria 1506
200 Ga0495657_0043942 3300046675 Bacteria 3043
201 Ga0495599_0003303 3300046678 Bacteria 9416
202 Ga0495623_0082315 3300046679 Bacteria 1989
203 Ga0495646_0068633 3300046680 Bacteria 2092
204 Ga0495658_0075380 3300046683 Unclassified 1968
205 Ga0495600_0082492 3300046809 Bacteria 2098
206 Ga0495600_0091490 3300046809 Bacteria 1984
207 Ga0495604_0045702 3300047317 Bacteria 3417
208 Ga0495674_0057875 3300047319 Bacteria 3391
209 Ga0495680_0023199 3300047322 Bacteria 5161
210 Ga0495675_0005507 3300047444 Bacteria 7725
211 Ga0495675_0113018 3300047444 Bacteria 1694
212 Ga0495684_0006375 3300047471 Bacteria 9161
213 Ga0495684_0076244 3300047471 Bacteria 2546
214 Ga0495686_0000087 3300047472 Bacteria 196747
215 Ga0495602_0023719 3300048088 Bacteria 5971
216 Ga0496104_0000014 3300048907 Bacteria 377972
217 Ga0496106_0220167 3300048909 Unclassified 1514
218 Ga0496126_0043162 3300048929 Unclassified 4161
219 Ga0501314_000596 3300049530 Bacteria 2292
220 Ga0501031_0000351 3300049568 Bacteria 26758
221 Ga0501032_0001100 3300049569 Bacteria 21612
222 Ga0501033_0014599 3300049570 Bacteria 5963
223 Ga0501034_0019676 3300049571 Bacteria 6902
224 Ga0501036_0000145 3300049572 Bacteria 46063
225 Ga0501036_0144593 3300049572 Bacteria 2006
226 Ga0501037_0000555 3300049573 Bacteria 29704
227 Ga0501038_0000354 3300049574 Bacteria 39331
228 Ga0501039_0006282 3300049575 Bacteria 9024
229 Ga0501043_0009413 3300049579 Bacteria 7669
230 Ga0501043_0063464 3300049579 Bacteria 2901
231 Ga0501046_0001847 3300049580 Bacteria 20152
232 Ga0501047_0005446 3300049581 Bacteria 11976
233 Ga0501048_0036025 3300049582 Bacteria 3558
234 Ga0501067_0002418 3300049583 Bacteria 10316
235 Ga0501068_0005237 3300049584 Bacteria 7077
236 Ga0501069_0012063 3300049585 Bacteria 4589
237 Ga0501070_0013256 3300049586 Bacteria 6949
238 Ga0501072_0001843 3300049588 Bacteria 15787
239 Ga0501073_0004120 3300049589 Bacteria 10911
240 Ga0501075_0105562 3300049591 Bacteria 2141
241 Ga0501076_0061679 3300049592 Bacteria 2984
242 Ga0501077_0004662 3300049593 Bacteria 8331
243 Ga0501239_000839 3300049672 Bacteria 2480
244 Ga0501247_001646 3300049677 Bacteria 2205
245 Ga0501249_005767 3300049679 Bacteria 2531
246 Ga0501079_0010334 3300049741 Bacteria 7091
247 Ga0501080_0001388 3300049742 Bacteria 20288
248 Ga0501083_0004859 3300049744 Bacteria 9500
249 Ga0501268_000972 3300049765 Bacteria 3392
250 Ga0501035_0003110 3300049822 Bacteria 15944
251 Ga0501044_0007239 3300049823 Bacteria 12198
252 nmdc:mga0qj67_707_c1 3300050509 Bacteria 22741
253 nmdc:mga06r32_44765_c1 3300050510 Bacteria 4216
254 nmdc:mga08y16_77593_c1 3300050511 Bacteria 3464
255 nmdc:mga0n895_229386_c1 3300050512 Bacteria 1885
256 Ga0501084_0001352 3300054114 Bacteria 19376
257 Ga0501082_0002245 3300060353 Bacteria 16907
258 Ga0105248_10054699
259 Ga0070658_10106438
260 Ga0070683_100053198
261 Ga0070683_100202609
262 Ga0070666_10026782
263 Ga0070680_100082336
264 Ga0068868_100001696
265 Ga0070660_100177676
266 Ga0070714_100009509
267 Ga0070713_100004551
268 Ga0070713_100016639
269 Ga0070711_100055096
270 Ga0070708_100155664
271 Ga0070678_100085864
272 Ga0070662_100070744
273 Ga0070681_10006677
274 Ga0070681_10099917
275 Ga0068867_100019457
276 Ga0068867_100054218
277 Ga0070685_10029012
278 Ga0070679_100053931
279 Ga0070679_100084732
280 Ga0068853_100125408
281 Ga0070693_100073331
282 Ga0070704_100018370
283 Ga0068855_100018827
284 Ga0068857_100009524
285 Ga0068857_100009525
286 Ga0068856_100037955
287 Ga0068858_100009978
288 Ga0068860_100002177
289 Ga0068860_100055824
290 Ga0068860_100175160
291 Ga0081539_10000582
292 Ga0097621_100002841
293 Ga0097621_100027435
294 Ga0097621_100045610
295 Ga0068871_100001446
296 Ga0068871_100004819
297 Ga0068871_100275993
298 Ga0075430_100002773
299 Ga0075434_100033598
300 Ga0075434_100266016
301 Ga0068865_100000915
302 Ga0068865_100003425
303 Ga0075435_100173071
304 Ga0105240_10000394
305 Ga0105240_10000408
306 Ga0105240_10033161
307 Ga0105240_10101329
308 Ga0105240_10135229
309 Ga0105240_10181530
310 Ga0111539_10005781
311 Ga0105245_10000103
312 Ga0105245_10003495
313 Ga0114129_10566334
314 Ga0105241_10000629
315 Ga0105241_10057670
316 Ga0105241_10092358
317 Ga0105241_10128788
318 Ga0105242_10000408
319 Ga0105242_10001806
320 Ga0105242_10018331
321 Ga0105242_10032293
322 Ga0105242_10127370
323 Ga0105242_10128300
324 Ga0105242_10224787
325 Ga0105248_10007431
326 Ga0105248_10014595
327 Ga0105248_10093247
328 Ga0105248_10296226
329 Ga0105237_10004471
330 Ga0105237_10011944
331 Ga0105237_10012357
332 Ga0105237_10018965
333 Ga0105237_10060282
334 Ga0105238_10002066
335 Ga0105238_10017284
336 Ga0105238_10026275
337 Ga0105238_10036509
338 Ga0105238_10192805
339 Ga0105249_10003850
340 Ga0105249_10401211
341 Ga0105239_10005641
342 Ga0105239_10007133
343 Ga0105239_10011044
344 Ga0105246_10004968
345 Ga0157370_10002474
346 Ga0157370_10094518
347 Ga0157369_10035771
348 Ga0157369_10051206
349 Ga0157369_10125575
350 Ga0157369_10173531
351 Ga0157369_10331954
352 Ga0157374_10003888
353 Ga0157374_10049550
354 Ga0157374_10291080
355 Ga0157378_10002402
356 Ga0157378_10002405
357 Ga0157372_10010752
358 Ga0157375_10014528
359 Ga0157375_10201232
360 Ga0163163_10008653
361 Ga0163163_10064036
362 Ga0163163_10084097
363 Ga0163163_10088221
364 Ga0163163_10436300
365 Ga0157379_10001659
366 Ga0157376_10078902
367 Ga0213875_10000056
368 Ga0213875_10000108
369 Ga0213875_10009815
370 Ga0207699_10184820
371 Ga0207707_10001648
372 Ga0207707_10065070
373 Ga0207695_10003294
374 Ga0207695_10186536
375 Ga0207671_10008574
376 Ga0207671_10012493
377 Ga0207671_10181850
378 Ga0207663_10054799
379 Ga0207660_10028337
380 Ga0207660_10083375
381 Ga0207652_10020459
382 Ga0207652_10091489
383 Ga0207694_10008103
384 Ga0207687_10000599
385 Ga0207687_10005492
386 Ga0207700_10002657
387 Ga0207700_10152069
388 Ga0207664_10002538
389 Ga0207686_10018082
390 Ga0207686_10039145
391 Ga0207709_10031941
392 Ga0207704_10001565
393 Ga0207704_10048739
394 Ga0207704_10052067
395 Ga0207711_10013820
396 Ga0207711_10161148
397 Ga0207661_10022680
398 Ga0207667_10089164
399 Ga0207667_10119980
400 Ga0207658_10052708
401 Ga0207677_10015736
402 Ga0207703_10040210
403 Ga0207703_10132425
404 Ga0207702_10165344
405 Ga0207641_10032894
406 Ga0207648_10045839
407 Ga0207674_10000372
408 Ga0207674_10001088
409 Ga0207674_10014810
410 Ga0207683_10100310
411 Ga0268264_10017753
412 Ga0268264_10018088
413 Ga0268264_10086803
414 Ga0268264_10110081
415 Ga0265314_10000816
416 Ga0307413_10093485
417 Ga0373934_0000490
418 Ga0373927_0006105
419 Ga0373927_0050270
420 Ga0373947_0001737
421 Ga0373947_0112766
422 Ga0373937_0002954
423 Ga0373937_0157974
424 Ga0373925_0000166
425 Ga0436364_0104807
426 Ga0436364_0115933
427 Ga0436364_0196389
428 Ga0436364_0228583
429 Ga0436364_0596040
430 Ga0436364_0608309
431 Ga0436364_0657423
432 Ga0436364_0778800
433 Ga0436364_1110019
434 Ga0436365_0546481
435 Ga0436365_1351326
436 Ga0495651_0062645
437 Ga0495653_0157450
438 Ga0495580_0000955
439 Ga0495582_0010388
440 Ga0495662_0022559
441 Ga0495664_0033622
442 Ga0495608_0094428
443 Ga0495618_0066738
444 Ga0495628_0042760
445 Ga0495630_0077530
446 Ga0495652_0031610
447 Ga0495652_0118530
448 Ga0495640_0022614
449 Ga0495586_0041291
450 Ga0495587_0018179
451 Ga0495645_0052454
452 Ga0495645_0076834
453 Ga0495667_0002274
454 Ga0495667_0038764
455 Ga0495634_0068968
456 Ga0495635_0165219
457 Ga0495657_0043942
458 Ga0495599_0003303
459 Ga0495623_0082315
460 Ga0495646_0068633
461 Ga0495658_0075380
462 Ga0495600_0082492
463 Ga0495600_0091490
464 Ga0495604_0045702
465 Ga0495674_0057875
466 Ga0495680_0023199
467 Ga0495675_0005507
468 Ga0495675_0113018
469 Ga0495684_0006375
470 Ga0495684_0076244
471 Ga0495686_0000087
472 Ga0495602_0023719
473 Ga0496104_0000014
474 Ga0496106_0220167
475 Ga0496126_0043162
476 Ga0501314_000596
477 Ga0501031_0000351
478 Ga0501032_0001100
479 Ga0501033_0014599
480 Ga0501034_0019676
481 Ga0501036_0000145
482 Ga0501036_0144593
483 Ga0501037_0000555
484 Ga0501038_0000354
485 Ga0501039_0006282
486 Ga0501043_0009413
487 Ga0501043_0063464
488 Ga0501046_0001847
489 Ga0501047_0005446
490 Ga0501048_0036025
491 Ga0501067_0002418
492 Ga0501068_0005237
493 Ga0501069_0012063
494 Ga0501070_0013256
495 Ga0501072_0001843
496 Ga0501073_0004120
497 Ga0501075_0105562
498 Ga0501076_0061679
499 Ga0501077_0004662
500 Ga0501239_000839
501 Ga0501247_001646
502 Ga0501249_005767
503 Ga0501079_0010334
504 Ga0501080_0001388
505 Ga0501083_0004859
506 Ga0501268_000972
507 Ga0501035_0003110
508 Ga0501044_0007239
509 nmdc:mga0qj67_707_c1
510 nmdc:mga06r32_44765_c1
511 nmdc:mga08y16_77593_c1
512 nmdc:mga0n895_229386_c1
513 Ga0501084_0001352
514 Ga0501082_0002245

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00984

UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

208

303

0.98

PF03721

UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

10

194

0.92

PF03720

UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

321

403

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7fgp-assembly1.cif.gz_A crystal structure of aureimonas altamirenisis flavin-containing opine dehydrogenase (fad-bound form) 0.9384 60 93
2bi8-assembly1.cif.gz_A udp-galactopyranose mutase from klebsiella pneumoniae with reduced fad 0.9375 60 91
3int-assembly3.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (reduced) 0.9364 60 91
1wam-assembly1.cif.gz_A structure of udp-galactopyranose mutase from klebsiella pneumoniae with fadh- 0.936 61 91
4j36-assembly2.cif.gz_B cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.934 61 93
ID Description Score Start End Superfamily
af_Q18006_4_263_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.006 64 91 3.50.50.60
af_F6P928_26_379_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9781 64 91 3.50.50.60
af_A4HWA7_1_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.974 62 91 3.50.50.60
1mfzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9639 64 257 3.40.50.720
af_Q5VQP1_29_415_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9613 64 92 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A662HMY3-F1-model_v4 GDP-mannose dehydrogenase 0.9994 63 136 GO:0016616
GO:0051287
AF-A0A4Q3KYP0-F1-model_v4 deleted 0.9937 62 134
AF-A0A2V2SNS9-F1-model_v4 deleted 0.9852 62 139
AF-A0A4D4K5J1-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase N-terminal domain-containing protein 0.9821 62 176 GO:0016616
GO:0051287
AF-A0A4Q3KYP0-F1-model_v4 deleted 0.9803 62 134

Map