F366755

General Info

Members Datasets Scaffolds Average Seq Length
256 203 186 776

Family's Representative Sequence

Representative Sequence 3300046522|Ga0495643_0008475|Ga0495643_0008475_1562_4054
Length 822
Sequence MDMSDTRFNSPSVKHGLKWPGNAEPGIANDEAPAAHGKAFPHSMETFPMNLSPFSANPSGCPVAHGQPSAMRQRAAGFDPFSEGYQQDPPEYLRWAREQEPVFYSPELGYWVVTRYESIKAIFRDNITFSPSIALEKITPTGEEANAVLASYGYAMNRTLVNEDEPAHMPRRRVLMDPFTPEELKHHEPMVRRLARQYVDRFIDDGKADLVDQMLWEVPLTVALHFLGVPEEDMDTLREYSIAHTVNTWGRPKPEEQVAVAHAVGNFWQFAGKVLDKMRRDPSGPGWMKYGIRKQAEHPEVITDSYLHSMMMAGIVAAHETTANATANAVKLLLQHPRVWREICEDPSLIPNAVDECLRHNGSIAAWRRLATKDVRIDDVDIPAGSKLLIVTSSANHDERHFSDADLFDIRRDNASDHLTFGYGSHQCMGKNLARMEMQIFLEEFTRRLPHMKLSQQTFSYVPNTSFRGPEHLWVEWDPAQNPERRDRALLEAQVPVRIGEPSRHTITRPVLVQSVTPAANGIVKLRLVAPDGAPLPRWTPGAHIDIECGSPEMTRQYSLCGDPADAAALEIAVLHEPQGRGGSAWIHANVRAGDRLKIRGPRNHFRMDESLSKMIFIAGGIGITPVSAMARRARALGIDYQLHYSGRSRKTMAFVEQLAQLHGERLHVYADDEGRRNDLQALLAHPEPDAQIYACGPAGMLKAIEAACAAWPGNALRTEHFVSTAGALDPSREHAFEIELKDSGLVISVAPDQTVLAALRAANIDVQSDCEEGLCGSCEVRVLAGEVDHRDVVLTRAEREANVKMMTCCSRAAGKKLVLGI

Samples

Sample ID Description Type Environment
1 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
4 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
5 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
6 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
7 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
8 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
9 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
10 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
11 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
12 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
13 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
14 2643221569 Achromobacter sp. Root565 Isolate Unclassified
15 2643221594 Achromobacter sp. Root170 Isolate Unclassified
16 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
17 2643221609 Acidovorax sp. Root217 Isolate Unclassified
18 2643221611 Acidovorax sp. Root219 Isolate Unclassified
19 2643221621 Achromobacter sp. Root83 Isolate Unclassified
20 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
21 2643221683 Variovorax sp. Root473 Isolate Unclassified
22 2721755523 Delftia sp. HK171 Isolate Unclassified
23 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
24 2738541307 Variovorax sp. GV008 Isolate Unclassified
25 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
26 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
27 2738543012 Acidovorax sp. CF301 Isolate Unclassified
28 2738543019 Variovorax sp. GV040 Isolate Unclassified
29 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
30 2816332133 Acidovorax radicis 2721A Isolate Unclassified
31 2818991446 Variovorax sp. 1180 Isolate Unclassified
32 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
33 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
34 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
35 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
36 2842677519 Variovorax sp. R-72495 Isolate Unclassified
37 2842733646 Variovorax sp. R-72446 Isolate Unclassified
38 2842747753 Variovorax sp. R-72060 Isolate Unclassified
39 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
40 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
41 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
42 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
43 2858950400 Achromobacter sp. K91 Isolate Unclassified
44 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
45 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
46 2885198086 Variovorax sp. 679 Isolate Unclassified
47 2885211737 Variovorax sp. 553 Isolate Unclassified
48 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
49 2899924645 Variovorax sp. 369 Isolate Unclassified
50 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
51 2904456579 Variovorax sp. 2002 Isolate Unclassified
52 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
53 2904564687 Burkholderia sp. 571 Isolate Unclassified
54 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
55 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
56 2928037797 Variovorax sp. 1126 Isolate Unclassified
57 2928044640 Variovorax sp. 1128 Isolate Unclassified
58 2928051484 Variovorax sp. 1133 Isolate Unclassified
59 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
60 2928070936 Variovorax gossypii 1167 Isolate Unclassified
61 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
62 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
63 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
64 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
65 2929520902 Variovorax beijingensis 502 Isolate Unclassified
66 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
67 2941479691
68 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
69 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
70 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
71 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
72 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
73 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
74 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
75 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
76 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
77 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
78 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
79 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
80 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
81 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
82 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
83 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
84 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
85 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
86 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
87 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
88 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
89 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
90 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
91 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
92 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
93 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
94 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
95 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
96 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
97 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
98 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
99 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
100 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
101 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
102 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
103 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
104 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
105 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
106 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
107 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
108 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
109 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
110 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
111 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
112 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
113 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
114 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
116 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
118 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
119 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
120 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
121 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
122 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
124 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
125 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
126 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
128 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
129 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
146 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
147 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
148 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
149 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
150 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
151 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
152 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
153 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
154 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
155 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
156 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
157 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
158 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
159 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
160 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
161 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
162 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
163 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
164 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
165 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
166 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
167 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
168 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
169 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
170 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
171 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
172 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
173 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
174 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
175 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
176 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
177 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
178 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
179 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
180 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
181 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
182 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
183 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
184 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
185 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
186 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
187 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
188 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
189 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
193 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
194 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
195 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
196 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
197 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
198 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
199 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
200 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
201 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
202 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
203 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 72.27
Metatranscriptomes 0.39
Isolates 27.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 33.2
Nodule 4.69
Rhizoplane 3.52
Rhizosphere 35.94
Stem 0
Stem Tuber 0
Unclassified 22.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10002451 3300002067 Bacteria 6447
2 JGI25150J39212_1002746 3300002774 Bacteria 4278
3 JGI25159J45721_1007225 3300002987 Bacteria 3207
4 JGI25151J46595_10000065 3300003187 Bacteria 145136
5 JGI25151J46595_10000751 3300003187 Bacteria 26419
6 JGI25151J46595_10002118 3300003187 Bacteria 12380
7 JGI25151J46595_10010425 3300003187 Bacteria 4321
8 JGI25153J46596_10014666 3300003215 Bacteria 3243
9 rootH1_10093403 3300003316 Unclassified 2975
10 JGI25160J50197_1011133 3300003354 Bacteria 3207
11 JGI25161J50226_1000610 3300003374 Bacteria 14729
12 Ga0006562J51391_1046509 3300003578 Bacteria 5280
13 Ga0055535_1001238 3300003761 Bacteria 14268
14 Ga0055542_1000052 3300003762 Bacteria 173583
15 Ga0055526_1001097 3300003771 Bacteria 19683
16 Ga0055537_1000409 3300003773 Bacteria 28111
17 Ga0055536_1000026 3300003781 Bacteria 166220
18 Ga0055536_1003454 3300003781 Bacteria 8466
19 Ga0055536_1005686 3300003781 Bacteria 6019
20 Ga0055534_1000189 3300003784 Bacteria 45268
21 Ga0055534_1001519 3300003784 Bacteria 9066
22 Ga0055530_10000756 3300003791 Bacteria 26915
23 Ga0055543_1006183 3300004625 Bacteria 2935
24 Ga0065165_1013477 3300005262 Bacteria 3245
25 Ga0070690_100015221 3300005330 Bacteria 4584
26 Ga0068868_100001782 3300005338 Bacteria 14769
27 Ga0070689_100014610 3300005340 Bacteria 5708
28 Ga0070675_100000866 3300005354 Bacteria 21542
29 Ga0070673_100041568 3300005364 Bacteria 3537
30 Ga0070667_100002208 3300005367 Bacteria 17125
31 Ga0068854_100010962 3300005578 Bacteria 5882
32 Ga0068859_100003928 3300005617 Bacteria 15180
33 Ga0068864_100002466 3300005618 Bacteria 15271
34 Ga0068851_10002279 3300005834 Bacteria 8430
35 Ga0068858_100009190 3300005842 Bacteria 9445
36 Ga0068862_100028461 3300005844 Bacteria 4706
37 Ga0075365_10002696 3300006038 Bacteria 8843
38 Ga0075365_10041669 3300006038 Bacteria 3001
39 Ga0075364_10001535 3300006051 Bacteria 12592
40 Ga0075367_10000347 3300006178 Bacteria 16515
41 Ga0075370_10002578 3300006353 Bacteria 8440
42 Ga0075370_10003133 3300006353 Bacteria 7811
43 Ga0097620_100003928 3300006931 Bacteria 15180
44 Ga0079104_1000483 3300006946 Bacteria 44070
45 Ga0099826_10000011 3300006948 Bacteria 287659
46 Ga0105244_10010855 3300009036 Bacteria 5498
47 Ga0105250_10001409 3300009092 Bacteria 12991
48 Ga0105243_10010979 3300009148 Bacteria 6849
49 Ga0105248_10081370 3300009177 Bacteria 3640
50 Ga0105238_10010960 3300009551 Bacteria 9117
51 Ga0163162_10001899 3300013306 Bacteria 19688
52 Ga0163162_10042206 3300013306 Bacteria 4565
53 Ga0163163_10010019 3300014325 Bacteria 8500
54 Ga0183362_10002 3300015683 Bacteria 1432711
55 Ga0163161_10015346 3300017792 Bacteria 5340
56 Ga0209258_100009 3300025242 Bacteria 996276
57 Ga0207425_1000294 3300025245 Bacteria 36412
58 Ga0209148_1000007 3300025254 Bacteria 1592273
59 Ga0209129_1000083 3300025258 Bacteria 183270
60 Ga0209565_1000109 3300025263 Bacteria 120345
61 Ga0209565_1000194 3300025263 Bacteria 73024
62 Ga0209565_1000614 3300025263 Bacteria 23607
63 Ga0209673_1000089 3300025273 Bacteria 202240
64 Ga0209673_1000412 3300025273 Bacteria 75374
65 Ga0209673_1002306 3300025273 Bacteria 13549
66 Ga0209130_1001006 3300025284 Bacteria 21888
67 Ga0209130_1001264 3300025284 Bacteria 17579
68 Ga0209130_1006135 3300025284 Bacteria 3969
69 Ga0209675_1000026 3300025291 Bacteria 284716
70 Ga0209675_1000118 3300025291 Bacteria 110507
71 Ga0209675_1000304 3300025291 Bacteria 44374
72 Ga0209675_1000723 3300025291 Bacteria 22450
73 Ga0209676_1000004 3300025292 Bacteria 1138360
74 Ga0209676_1000059 3300025292 Bacteria 344882
75 Ga0209676_1003897 3300025292 Bacteria 8697
76 Ga0209676_1004552 3300025292 Bacteria 7680
77 Ga0209025_1000018 3300025294 Bacteria 686898
78 Ga0209025_1000066 3300025294 Bacteria 298742
79 Ga0209025_1000155 3300025294 Bacteria 169116
80 Ga0209025_1000159 3300025294 Bacteria 167081
81 Ga0209025_1000220 3300025294 Bacteria 136977
82 Ga0209025_1000492 3300025294 Bacteria 75894
83 Ga0209025_1001994 3300025294 Bacteria 23403
84 Ga0209025_1006815 3300025294 Bacteria 8731
85 Ga0209564_1000244 3300025295 Bacteria 117606
86 Ga0209564_1000314 3300025295 Bacteria 95107
87 Ga0209564_1000562 3300025295 Bacteria 59138
88 Ga0209564_1001005 3300025295 Bacteria 35066
89 Ga0209758_1000132 3300025297 Bacteria 183273
90 Ga0209758_1010327 3300025297 Bacteria 5605
91 Ga0209050_1000002 3300025298 Bacteria 1792849
92 Ga0209050_1000827 3300025298 Bacteria 42937
93 Ga0209256_1000192 3300025299 Bacteria 117606
94 Ga0209256_1000251 3300025299 Bacteria 95107
95 Ga0209256_1000602 3300025299 Bacteria 49884
96 Ga0209256_1001365 3300025299 Bacteria 25672
97 Ga0207426_1000095 3300025302 Bacteria 274234
98 Ga0207426_1000385 3300025302 Bacteria 75897
99 Ga0207426_1002216 3300025302 Bacteria 13038
100 Ga0209051_1000002 3300025303 Bacteria 1631846
101 Ga0209051_1000113 3300025303 Bacteria 152417
102 Ga0209051_1000130 3300025303 Bacteria 141656
103 Ga0209257_1000002 3300025304 Bacteria 1767052
104 Ga0207696_1001742 3300025711 Bacteria 11268
105 Ga0207655_1005130 3300025728 Bacteria 9026
106 Ga0207645_10037114 3300025907 Bacteria 3128
107 Ga0207695_10103616 3300025913 Bacteria 2836
108 Ga0207649_10028212 3300025920 Bacteria 3303
109 Ga0207659_10000204 3300025926 Bacteria 35509
110 Ga0207644_10000730 3300025931 Bacteria 20840
111 Ga0207709_10000186 3300025935 Bacteria 83013
112 Ga0207709_10000191 3300025935 Bacteria 82020
113 Ga0207709_10001125 3300025935 Bacteria 19590
114 Ga0207670_10009452 3300025936 Bacteria 5564
115 Ga0207651_10002573 3300025960 Bacteria 8666
116 Ga0207658_10001441 3300025986 Bacteria 18547
117 Ga0207703_10003576 3300026035 Bacteria 12988
118 Ga0207676_10000459 3300026095 Bacteria 34117
119 Ga0207683_10016702 3300026121 Bacteria 6246
120 Ga0209281_1000002 3300027111 Bacteria 1924012
121 Ga0209282_1000056 3300027666 Bacteria 100584
122 Ga0209282_1000136 3300027666 Bacteria 43331
123 Ga0265338_10002522 3300028800 Bacteria 27210
124 Ga0268256_1000145 3300030500 Bacteria 95907
125 Ga0314311_1145470 3300030733 Bacteria 6895
126 Ga0316180_1114217 3300030736 Bacteria 4030
127 Ga0265327_10031173 3300031251 Bacteria 3000
128 Ga0307408_100000302 3300031548 Bacteria 47286
129 Ga0307408_100003976 3300031548 Bacteria 10070
130 Ga0307405_10014166 3300031731 Bacteria 4279
131 Ga0307406_10000572 3300031901 Bacteria 21254
132 Ga0307406_10017104 3300031901 Bacteria 4221
133 Ga0307412_10003232 3300031911 Bacteria 9065
134 Ga0395905_0098259 3300037471 Bacteria 2749
135 Ga0436364_1404145 3300037853 Bacteria 2513
136 Ga0466961_0002346 3300044693 Bacteria 11771
137 Ga0495650_0002705 3300046471 Bacteria 13746
138 Ga0495610_0004940 3300046512 Bacteria 9665
139 Ga0495616_0004550 3300046513 Bacteria 8729
140 Ga0495643_0008475 3300046522 Bacteria 6504
141 Ga0495648_0002047 3300046524 Bacteria 19132
142 Ga0495642_0005831 3300046528 Bacteria 4725
143 Ga0495652_0007494 3300046529 Bacteria 10058
144 Ga0495665_0000144 3300046531 Bacteria 34978
145 Ga0495609_0001410 3300046538 Bacteria 16083
146 Ga0495656_0000559 3300046615 Bacteria 12163
147 Ga0495623_0014386 3300046679 Bacteria 5121
148 Ga0495646_0016047 3300046680 Bacteria 4754
149 Ga0495671_0001776 3300046692 Bacteria 13956
150 Ga0495680_0010116 3300047322 Bacteria 8433
151 Ga0495683_0006245 3300047323 Bacteria 6519
152 Ga0495687_000018 3300047443 Bacteria 342973
153 Ga0495687_013352 3300047443 Bacteria 4295
154 Ga0495593_0002392 3300047673 Bacteria 11282
155 Ga0495602_0001665 3300048088 Bacteria 22100
156 Ga0496100_0003691 3300048903 Bacteria 8011
157 Ga0496102_0013147 3300048905 Bacteria 7162
158 Ga0496104_0060341 3300048907 Bacteria 3593
159 Ga0496105_0009021 3300048908 Bacteria 7782
160 Ga0496110_0017722 3300048913 Bacteria 5958
161 Ga0496116_0000485 3300048919 Bacteria 54705
162 Ga0496116_0005111 3300048919 Bacteria 12319
163 Ga0496116_0009622 3300048919 Bacteria 8221
164 Ga0496121_0000159 3300048924 Bacteria 147049
165 Ga0496122_0000063 3300048925 Bacteria 241378
166 Ga0496122_0000102 3300048925 Bacteria 197296
167 Ga0496122_0022951 3300048925 Bacteria 5523
168 Ga0496123_0000045 3300048926 Bacteria 249294
169 Ga0496123_0000742 3300048926 Bacteria 52830
170 Ga0496123_0015653 3300048926 Bacteria 6206
171 Ga0496124_0000024 3300048927 Bacteria 414291
172 Ga0496125_0000005 3300048928 Bacteria 827598
173 Ga0496126_0006391 3300048929 Bacteria 13141
174 Ga0501032_0032341 3300049569 Bacteria 3585
175 Ga0501034_0000401 3300049571 Bacteria 73167
176 Ga0501047_0001573 3300049581 Bacteria 22293
177 Ga0501048_0103784 3300049582 Bacteria 2006
178 nmdc:mga0yw44_4072_c1 3300050492 Bacteria 6624
179 nmdc:mga07m45_13752_c1 3300050496 Bacteria 4298
180 Ga0500643_000018 3300053087 Bacteria 296505
181 Ga0500651_0000059 3300053093 Bacteria 71552
182 Ga0500595_000067 3300053119 Bacteria 73964
183 Ga0500658_0000220 3300053134 Bacteria 27258
184 Ga0500658_0000316 3300053134 Bacteria 21583
185 Ga0500637_0000035 3300053178 Bacteria 51004
186 Ga0500661_000618 3300055283 Bacteria 6630

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049582 Ga0501048_0103784 Ga0501048_0103784_22_1971 619
2 iso_pu_bacteria 2643221541 2643731049 720
3 iso_pu_bacteria 2643221606 2644044299 720
4 iso_pu_bacteria 2643221671 2644391777 720
5 3300025294 Ga0209025_1001994 Ga0209025_10019949 733
6 3300048924 Ga0496121_0000159 Ga0496121_0000159_14875_17139 733
7 3300053134 Ga0500658_0000316 Ga0500658_0000316_10812_13070 733
8 3300046512 Ga0495610_0004940 Ga0495610_0004940_3559_5820 734
9 3300046513 Ga0495616_0004550 Ga0495616_0004550_3034_5295 734
10 3300049569 Ga0501032_0032341 Ga0501032_0032341_1186_3495 737
11 3300049581 Ga0501047_0001573 Ga0501047_0001573_16250_18559 737
12 3300053119 Ga0500595_000067 Ga0500595_000067_36012_38282 737
13 3300053178 Ga0500637_0000035 Ga0500637_0000035_16927_19197 737
14 3300055283 Ga0500661_000618 Ga0500661_000618_832_3102 737
15 iso_pu_bacteria 2834641062 2834642329 737
16 iso_pu_bacteria 2899259804 2899262208 738
17 3300006946 Ga0079104_1000483 Ga0079104_100048312 739
18 3300009092 Ga0105250_10001409 Ga0105250_1000140910 739
19 3300025711 Ga0207696_1001742 Ga0207696_100174210 739
20 3300027111 Ga0209281_1000002 Ga0209281_100000233 739
21 iso_pu_bacteria 2738543005 2739206099 739
22 iso_pu_bacteria 2928142448 2928143871 739
23 3300048926 Ga0496123_0015653 Ga0496123_0015653_1184_3481 740
24 3300048928 Ga0496125_0000005 Ga0496125_0000005_612153_614450 740
25 3300048929 Ga0496126_0006391 Ga0496126_0006391_2662_4959 740
26 3300006038 Ga0075365_10041669 Ga0075365_100416692 741
27 3300006948 Ga0099826_10000011 Ga0099826_1000001194 741
28 3300014325 Ga0163163_10010019 Ga0163163_100100197 741
29 3300015683 Ga0183362_10002 Ga0183362_10002426 741
30 3300027666 Ga0209282_1000056 Ga0209282_100005693 741
31 3300046692 Ga0495671_0001776 Ga0495671_0001776_2781_5156 741
32 3300048919 Ga0496116_0000485 Ga0496116_0000485_23931_26216 742
33 3300050492 nmdc:mga0yw44_4072_c1 nmdc:mga0yw44_4072_c1_247_2574 742
34 3300048925 Ga0496122_0000063 Ga0496122_0000063_173277_175640 743
35 3300048926 Ga0496123_0000045 Ga0496123_0000045_223702_226065 743
36 iso_pu_bacteria 2738541308 2738890943 743
37 3300025292 Ga0209676_1004552 Ga0209676_10045523 744
38 3300025298 Ga0209050_1000827 Ga0209050_100082731 744
39 3300025299 Ga0209256_1000602 Ga0209256_100060230 744
40 3300031911 Ga0307412_10003232 Ga0307412_100032323 744
41 3300009148 Ga0105243_10010979 Ga0105243_100109791 745
42 3300009177 Ga0105248_10081370 Ga0105248_100813703 745
43 3300025935 Ga0207709_10000186 Ga0207709_1000018633 745
44 3300031731 Ga0307405_10014166 Ga0307405_100141663 745
45 3300046615 Ga0495656_0000559 Ga0495656_0000559_4635_6953 745
46 3300049571 Ga0501034_0000401 Ga0501034_0000401_30708_33050 745
47 3300003187 JGI25151J46595_10000065 JGI25151J46595_1000006556 746
48 3300003771 Ga0055526_1001097 Ga0055526_100109711 746
49 3300003773 Ga0055537_1000409 Ga0055537_100040920 746
50 3300003784 Ga0055534_1000189 Ga0055534_100018923 746
51 3300005578 Ga0068854_100010962 Ga0068854_1000109624 746
52 3300009036 Ga0105244_10010855 Ga0105244_100108553 746
53 3300025263 Ga0209565_1000109 Ga0209565_100010993 746
54 3300025291 Ga0209675_1000118 Ga0209675_100011820 746
55 3300025294 Ga0209025_1000159 Ga0209025_100015965 746
56 3300025295 Ga0209564_1001005 Ga0209564_100100524 746
57 3300025299 Ga0209256_1001365 Ga0209256_100136524 746
58 3300025728 Ga0207655_1005130 Ga0207655_10051305 746
59 3300025920 Ga0207649_10028212 Ga0207649_100282122 746
60 3300025935 Ga0207709_10001125 Ga0207709_100011251 746
61 3300003187 JGI25151J46595_10002118 JGI25151J46595_100021189 747
62 3300003781 Ga0055536_1000026 Ga0055536_100002632 747
63 3300003781 Ga0055536_1005686 Ga0055536_10056867 747
64 3300025291 Ga0209675_1000026 Ga0209675_1000026170 747
65 3300025292 Ga0209676_1000059 Ga0209676_1000059136 747
66 3300025294 Ga0209025_1000066 Ga0209025_1000066193 747
67 3300025295 Ga0209564_1000562 Ga0209564_100056244 747
68 3300025303 Ga0209051_1000130 Ga0209051_100013028 747
69 3300025935 Ga0207709_10000191 Ga0207709_100001918 747
70 iso_pu_bacteria 2941479691 2941482993 747
71 3300046538 Ga0495609_0001410 Ga0495609_0001410_3453_5816 749
72 3300048925 Ga0496122_0000102 Ga0496122_0000102_41142_43493 749
73 3300048926 Ga0496123_0000742 Ga0496123_0000742_41142_43493 749
74 3300050496 nmdc:mga07m45_13752_c1 nmdc:mga07m45_13752_c1_1053_3383 749
75 iso_pu_bacteria 2738543012 2739243792 749
76 3300003187 JGI25151J46595_10000751 JGI25151J46595_1000075112 750
77 3300025294 Ga0209025_1000018 Ga0209025_1000018101 750
78 iso_pu_bacteria 2643221609 2644062889 750
79 iso_pu_bacteria 2643221611 2644070573 750
80 iso_pu_bacteria 2816332133 2816472633 750
81 iso_pu_bacteria 2840878972 2840880543 750
82 iso_pu_bacteria 2939631187 2939636537 750
83 3300047443 Ga0495687_000018 Ga0495687_000018_922_3228 751
84 iso_pu_bacteria 2513237150 2513952220 751
85 iso_pu_bacteria 2513237165 2514044808 751
86 iso_pu_bacteria 644736347 644751218 751
87 3300003316 rootH1_10093403 rootH1_100934032 752
88 iso_pu_bacteria 2599185214 2599622791 752
89 iso_pu_bacteria 2599185226 2599671270 752
90 iso_pu_bacteria 2599185227 2599679693 752
91 iso_pu_bacteria 2599185229 2599691709 752
92 iso_pu_bacteria 2643221683 2644467514 752
93 iso_pu_bacteria 2818991446 2819599873 752
94 iso_pu_bacteria 2831265667 2831267246 752
95 iso_pu_bacteria 2838054893 2838056342 752
96 iso_pu_bacteria 2842677519 2842680399 752
97 iso_pu_bacteria 2857542790 2857545042 752
98 iso_pu_bacteria 2858950400 2858951622 752
99 iso_pu_bacteria 2885198086 2885204716 752
100 iso_pu_bacteria 2885211737 2885218597 752
101 iso_pu_bacteria 2899924645 2899926613 752
102 iso_pu_bacteria 2904449895 2904452358 752
103 iso_pu_bacteria 2904456579 2904458494 752
104 iso_pu_bacteria 2919462493 2919467421 752
105 iso_pu_bacteria 2928037797 2928044301 752
106 iso_pu_bacteria 2928044640 2928051402 752
107 iso_pu_bacteria 2928051484 2928052402 752
108 iso_pu_bacteria 2928064002 2928064931 752
109 iso_pu_bacteria 2928070936 2928074586 752
110 iso_pu_bacteria 2928084124 2928087274 752
111 iso_pu_bacteria 2929520902 2929522281 752
112 3300006038 Ga0075365_10002696 Ga0075365_100026963 753
113 3300006178 Ga0075367_10000347 Ga0075367_100003472 753
114 3300006353 Ga0075370_10002578 Ga0075370_100025783 753
115 3300006353 Ga0075370_10003133 Ga0075370_100031334 753
116 iso_pu_bacteria 2510917013 2511086166 753
117 iso_pu_bacteria 2515154189 2516024305 753
118 iso_pu_bacteria 2842733646 2842734135 753
119 iso_pu_bacteria 2883087390 2883087879 753
120 iso_pu_bacteria 2904541872 2904548560 753
121 iso_pu_bacteria 2929160207 2929164772 753
122 iso_pu_bacteria 8003400568 8003402295 753
123 3300002774 JGI25150J39212_1002746 JGI25150J39212_10027462 754
124 3300002987 JGI25159J45721_1007225 JGI25159J45721_10072251 754
125 3300003215 JGI25153J46596_10014666 JGI25153J46596_100146661 754
126 3300003354 JGI25160J50197_1011133 JGI25160J50197_10111331 754
127 3300003374 JGI25161J50226_1000610 JGI25161J50226_100061012 754
128 3300003578 Ga0006562J51391_1046509 Ga0006562J51391_10465094 754
129 3300003781 Ga0055536_1003454 Ga0055536_10034547 754
130 3300003791 Ga0055530_10000756 Ga0055530_1000075618 754
131 3300004625 Ga0055543_1006183 Ga0055543_10061832 754
132 3300005262 Ga0065165_1013477 Ga0065165_10134771 754
133 3300025245 Ga0207425_1000294 Ga0207425_100029417 754
134 3300025258 Ga0209129_1000083 Ga0209129_100008318 754
135 3300025263 Ga0209565_1000194 Ga0209565_100019453 754
136 3300025263 Ga0209565_1000614 Ga0209565_100061418 754
137 3300025273 Ga0209673_1000089 Ga0209673_100008937 754
138 3300025273 Ga0209673_1000412 Ga0209673_100041218 754
139 3300025273 Ga0209673_1002306 Ga0209673_100230611 754
140 3300025284 Ga0209130_1001006 Ga0209130_10010062 754
141 3300025284 Ga0209130_1001264 Ga0209130_10012642 754
142 3300025291 Ga0209675_1000304 Ga0209675_100030418 754
143 3300025292 Ga0209676_1000004 Ga0209676_1000004361 754
144 3300025294 Ga0209025_1000155 Ga0209025_100015551 754
145 3300025294 Ga0209025_1000492 Ga0209025_100049218 754
146 3300025294 Ga0209025_1006815 Ga0209025_10068152 754
147 3300025295 Ga0209564_1000244 Ga0209564_1000244111 754
148 3300025295 Ga0209564_1000314 Ga0209564_100031457 754
149 3300025297 Ga0209758_1000132 Ga0209758_100013218 754
150 3300025297 Ga0209758_1010327 Ga0209758_10103273 754
151 3300025298 Ga0209050_1000002 Ga0209050_1000002871 754
152 3300025299 Ga0209256_1000192 Ga0209256_100019218 754
153 3300025299 Ga0209256_1000251 Ga0209256_100025157 754
154 3300025302 Ga0207426_1000095 Ga0207426_1000095209 754
155 3300025302 Ga0207426_1000385 Ga0207426_100038518 754
156 3300025303 Ga0209051_1000002 Ga0209051_1000002640 754
157 3300025304 Ga0209257_1000002 Ga0209257_1000002781 754
158 3300027666 Ga0209282_1000136 Ga0209282_100013638 754
159 3300030733 Ga0314311_1145470 Ga0314311_11454705 754
160 3300030736 Ga0316180_1114217 Ga0316180_11142173 754
161 3300053093 Ga0500651_0000059 Ga0500651_0000059_16164_18512 754
162 3300053134 Ga0500658_0000220 Ga0500658_0000220_10741_13089 754
163 iso_pu_bacteria 2513237082 2513556464 754
164 iso_pu_bacteria 2513237083 2513564484 754
165 iso_pu_bacteria 2721755763 2723876833 754
166 iso_pu_bacteria 2738541307 2738884807 754
167 iso_pu_bacteria 2842747753 2842749596 754
168 iso_pu_bacteria 2856287931 2856292607 754
169 iso_pu_bacteria 2857357740 2857360822 754
170 iso_pu_bacteria 8003955200 8003960833 754
171 3300003761 Ga0055535_1001238 Ga0055535_100123810 755
172 3300003762 Ga0055542_1000052 Ga0055542_100005217 755
173 3300005330 Ga0070690_100015221 Ga0070690_1000152212 755
174 3300005338 Ga0068868_100001782 Ga0068868_1000017828 755
175 3300005340 Ga0070689_100014610 Ga0070689_1000146101 755
176 3300005354 Ga0070675_100000866 Ga0070675_10000086610 755
177 3300005364 Ga0070673_100041568 Ga0070673_1000415682 755
178 3300005367 Ga0070667_100002208 Ga0070667_1000022088 755
179 3300005617 Ga0068859_100003928 Ga0068859_1000039288 755
180 3300005618 Ga0068864_100002466 Ga0068864_1000024668 755
181 3300005834 Ga0068851_10002279 Ga0068851_100022792 755
182 3300005842 Ga0068858_100009190 Ga0068858_1000091908 755
183 3300005844 Ga0068862_100028461 Ga0068862_1000284612 755
184 3300006931 Ga0097620_100003928 Ga0097620_1000039288 755
185 3300013306 Ga0163162_10001899 Ga0163162_1000189917 755
186 3300025242 Ga0209258_100009 Ga0209258_100009148 755
187 3300025254 Ga0209148_1000007 Ga0209148_1000007148 755
188 3300025303 Ga0209051_1000113 Ga0209051_100011392 755
189 3300025907 Ga0207645_10037114 Ga0207645_100371142 755
190 3300025926 Ga0207659_10000204 Ga0207659_1000020426 755
191 3300025931 Ga0207644_10000730 Ga0207644_1000073012 755
192 3300025936 Ga0207670_10009452 Ga0207670_100094525 755
193 3300025960 Ga0207651_10002573 Ga0207651_100025737 755
194 3300025986 Ga0207658_10001441 Ga0207658_100014417 755
195 3300026035 Ga0207703_10003576 Ga0207703_1000357610 755
196 3300026095 Ga0207676_10000459 Ga0207676_1000045922 755
197 3300026121 Ga0207683_10016702 Ga0207683_100167027 755
198 3300031251 Ga0265327_10031173 Ga0265327_100311732 755
199 3300031548 Ga0307408_100003976 Ga0307408_1000039764 755
200 3300031901 Ga0307406_10017104 Ga0307406_100171043 755
201 3300048927 Ga0496124_0000024 Ga0496124_0000024_297180_299525 755
202 iso_pu_bacteria 2599185292 2599905341 755
203 iso_pu_bacteria 2643221569 2643858882 755
204 iso_pu_bacteria 2643221594 2643981952 755
205 iso_pu_bacteria 2643221621 2644122748 755
206 iso_pu_bacteria 2808606395 2809034017 755
207 iso_pu_bacteria 2857537821 2857539893 755
208 3300003187 JGI25151J46595_10010425 JGI25151J46595_100104252 756
209 3300003784 Ga0055534_1001519 Ga0055534_10015192 756
210 3300006051 Ga0075364_10001535 Ga0075364_1000153511 756
211 3300025284 Ga0209130_1006135 Ga0209130_10061352 756
212 3300025291 Ga0209675_1000723 Ga0209675_100072317 756
213 3300025292 Ga0209676_1003897 Ga0209676_10038973 756
214 3300025294 Ga0209025_1000220 Ga0209025_1000220103 756
215 3300031548 Ga0307408_100000302 Ga0307408_10000030244 756
216 3300031901 Ga0307406_10000572 Ga0307406_1000057218 756
217 3300037471 Ga0395905_0098259 Ga0395905_0098259_376_2721 756
218 3300037853 Ga0436364_1404145 Ga0436364_1404145_16_2379 756
219 3300048919 Ga0496116_0005111 Ga0496116_0005111_9798_12155 756
220 3300053087 Ga0500643_000018 Ga0500643_000018_153928_156324 756
221 iso_pu_bacteria 2501025502 2501082495 756
222 iso_pu_bacteria 2721755523 2722886480 756
223 iso_pu_bacteria 2904564687 2904568355 756
224 iso_pu_bacteria 2904571731 2904575398 756
225 3300013306 Ga0163162_10042206 Ga0163162_100422063 757
226 3300017792 Ga0163161_10015346 Ga0163161_100153462 757
227 3300046522 Ga0495643_0008475 Ga0495643_0008475_1562_4054 757
228 3300046528 Ga0495642_0005831 Ga0495642_0005831_1643_4135 757
229 3300047443 Ga0495687_013352 Ga0495687_013352_1003_3495 757
230 3300048905 Ga0496102_0013147 Ga0496102_0013147_2197_4545 757
231 3300048907 Ga0496104_0060341 Ga0496104_0060341_312_2660 757
232 3300048908 Ga0496105_0009021 Ga0496105_0009021_1071_3419 757
233 iso_pu_bacteria 2738543019 2739280694 757
234 iso_pu_bacteria 2884298095 2884299653 757
235 iso_pu_bacteria 2928115317 2928119681 757
236 3300028800 Ga0265338_10002522 Ga0265338_1000252217 758
237 3300046471 Ga0495650_0002705 Ga0495650_0002705_9145_11493 759
238 3300002067 JGI24735J21928_10002451 JGI24735J21928_100024512 760
239 3300009551 Ga0105238_10010960 Ga0105238_100109607 760
240 3300025302 Ga0207426_1002216 Ga0207426_10022168 760
241 3300025913 Ga0207695_10103616 Ga0207695_101036161 760
242 3300030500 Ga0268256_1000145 Ga0268256_100014545 760
243 3300044693 Ga0466961_0002346 Ga0466961_0002346_7570_9918 760
244 3300046524 Ga0495648_0002047 Ga0495648_0002047_10756_13107 760
245 3300046529 Ga0495652_0007494 Ga0495652_0007494_7249_9579 760
246 3300046531 Ga0495665_0000144 Ga0495665_0000144_16775_19105 760
247 3300046679 Ga0495623_0014386 Ga0495623_0014386_2130_4460 760
248 3300046680 Ga0495646_0016047 Ga0495646_0016047_882_3212 760
249 3300047322 Ga0495680_0010116 Ga0495680_0010116_5036_7366 760
250 3300047323 Ga0495683_0006245 Ga0495683_0006245_2956_5319 760
251 3300047673 Ga0495593_0002392 Ga0495593_0002392_1701_4031 760
252 3300048088 Ga0495602_0001665 Ga0495602_0001665_19723_22053 760
253 3300048903 Ga0496100_0003691 Ga0496100_0003691_4587_6950 760
254 3300048913 Ga0496110_0017722 Ga0496110_0017722_1164_3494 760
255 3300048919 Ga0496116_0009622 Ga0496116_0009622_1062_3392 760
256 3300048925 Ga0496122_0022951 Ga0496122_0022951_1215_3578 760

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00067

p450

Cytochrome P450

287

465

0.89

PF00111

Fer2

2Fe-2S iron-sulfur cluster binding domain

739

814

0.85

PF00175

NAD_binding_1

Oxidoreductase NAD-binding domain

617

707

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6icm-assembly1.cif.gz_D-2 pseudomonas putida cbb5 ndma with ferredoxin domain of ndmd 0.9571 674 760
6icm-assembly1.cif.gz_D-2 pseudomonas putida cbb5 ndma with ferredoxin domain of ndmd 0.9362 674 760
6gii-assembly1.cif.gz_A the crystal structure of tepidiphilus thermophilus p450 heme domain 0.9088 31 441
4eh1-assembly1.cif.gz_A crystal structure of the flavohem-like-fad/nad binding domain of nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 0.9018 449 660
6gii-assembly1.cif.gz_A the crystal structure of tepidiphilus thermophilus p450 heme domain 0.8965 31 441
ID Description Score Start End Superfamily
af_O86347_1_100_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9786 448 544 2.40.30.10
af_P76254_226_321_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.9754 674 760 3.10.20.30
2piaA01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9521 444 544 2.40.30.10
af_O86347_224_309_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.9479 672 760 3.10.20.30
af_P76254_2_105_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9431 448 544 2.40.30.10
ID Description Score Start End GO Terms
AF-Q5NQC5-F1-model_v4 Ferredoxin 0.9841 672 760 GO:0051537
AF-A0A382C6E7-F1-model_v4 FAD-binding FR-type domain-containing protein 0.9805 450 563 GO:0016491
GO:0051537
AF-A0A350CRY8-F1-model_v4 Oxidoreductase 0.9796 672 760 GO:0051537
AF-A0A022MMI6-F1-model_v4 FAD-binding FR-type domain-containing protein 0.9691 449 549 GO:0016491
GO:0051537
AF-A0A3S4ENK6-F1-model_v4 deleted 0.9556 448 589

Feature Viewer

pLDDT pTM Quality
83.42 0.59 Medium
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Predicted Structure (AlphaFold2)

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