F366369

General Info

Members Datasets Scaffolds Average Seq Length
256 158 256 146

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10003027|Ga0075364_100030278
Length 153
Sequence MSGTGATRRERQLVLVVEDYQDAREMYAAYLQFSGFDVAEAANGVEAVDRATELLPDIVLMDLALPRMDGWEATRRLKGDPRTRHIPIVALTGHALAGHAEGAREAGCDSFVTKPCLPDALVAEIRRLLDRPPATGDNEKPSSQKPRATKRHS

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
79 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
80 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
81 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
82 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
87 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
88 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
89 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
90 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
91 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
92 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
93 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
94 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
95 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
96 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
97 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
98 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
99 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
100 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
119 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
120 3300049526 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_B_7_control Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
129 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
130 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
131 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
132 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
133 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
134 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
135 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
136 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
137 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
138 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
139 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
140 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
143 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
144 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
145 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
153 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
154 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
155 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.89
Nodule 0
Rhizoplane 4.3
Rhizosphere 82.42
Stem 0
Stem Tuber 0
Unclassified 0.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10072577 3300005290 Bacteria 4694
2 Ga0065712_10122217 3300005290 Bacteria 1654
3 Ga0065712_10147242 3300005290 Bacteria 1398
4 Ga0065715_10095686 3300005293 Bacteria 4027
5 Ga0065715_10664094 3300005293 Bacteria 671
6 Ga0070683_100009743 3300005329 Bacteria 8229
7 Ga0068869_100013758 3300005334 Bacteria 5390
8 Ga0070680_101210629 3300005336 Bacteria 653
9 Ga0070682_100242227 3300005337 Bacteria 1295
10 Ga0068868_100184438 3300005338 Bacteria 1733
11 Ga0070689_101876995 3300005340 Bacteria 547
12 Ga0070692_11047647 3300005345 Bacteria 573
13 Ga0070668_101291653 3300005347 Bacteria 663
14 Ga0070675_100868497 3300005354 Unclassified 826
15 Ga0070673_100567228 3300005364 Bacteria 1033
16 Ga0070673_100815519 3300005364 Bacteria 862
17 Ga0070673_100862459 3300005364 Bacteria 838
18 Ga0070659_100589978 3300005366 Bacteria 954
19 Ga0070713_100004905 3300005436 Bacteria 9080
20 Ga0070705_100380779 3300005440 Bacteria 1038
21 Ga0070681_10066625 3300005458 Bacteria 3570
22 Ga0070681_10329778 3300005458 Bacteria 1436
23 Ga0070684_100136282 3300005535 Bacteria 2218
24 Ga0068853_101758284 3300005539 Unclassified 601
25 Ga0070696_100072760 3300005546 Bacteria 2421
26 Ga0070693_100013797 3300005547 Bacteria 4124
27 Ga0070702_100741558 3300005615 Bacteria 753
28 Ga0068859_100929285 3300005617 Bacteria 954
29 Ga0068861_101083127 3300005719 Unclassified 769
30 Ga0068863_100392712 3300005841 Bacteria 1356
31 Ga0070717_10042788 3300006028 Bacteria 3695
32 Ga0075365_10029337 3300006038 Bacteria 3515
33 Ga0075365_10058818 3300006038 Bacteria 2560
34 Ga0075365_10064168 3300006038 Bacteria 2460
35 Ga0075368_10016483 3300006042 Bacteria 2755
36 Ga0075368_10211873 3300006042 Bacteria 822
37 Ga0075364_10003027 3300006051 Bacteria 9496
38 Ga0075364_10038494 3300006051 Bacteria 3098
39 Ga0075364_10073539 3300006051 Bacteria 2253
40 Ga0070712_100919139 3300006175 Unclassified 755
41 Ga0075362_10001037 3300006177 Bacteria 8554
42 Ga0075367_10021266 3300006178 Bacteria 3624
43 Ga0075367_10063034 3300006178 Bacteria 2215
44 Ga0075366_10001334 3300006195 Bacteria 12331
45 Ga0075366_10028190 3300006195 Bacteria 3295
46 Ga0075366_10268906 3300006195 Bacteria 1041
47 Ga0097621_100308220 3300006237 Bacteria 1400
48 Ga0097621_100497485 3300006237 Bacteria 1104
49 Ga0075370_10051170 3300006353 Bacteria 2343
50 Ga0075370_10109973 3300006353 Bacteria 1600
51 Ga0075428_100000792 3300006844 Bacteria 32965
52 Ga0075428_100019379 3300006844 Bacteria 7530
53 Ga0075428_100138063 3300006844 Bacteria 2650
54 Ga0075428_100569587 3300006844 Bacteria 1210
55 Ga0075428_100916859 3300006844 Bacteria 929
56 Ga0075430_100007336 3300006846 Bacteria 9314
57 Ga0075430_100008552 3300006846 Bacteria 8638
58 Ga0075430_100050436 3300006846 Bacteria 3510
59 Ga0075430_100157559 3300006846 Bacteria 1890
60 Ga0075430_100486840 3300006846 Bacteria 1018
61 Ga0075431_100001335 3300006847 Bacteria 22541
62 Ga0075431_100065716 3300006847 Bacteria 3745
63 Ga0075431_100567945 3300006847 Bacteria 1121
64 Ga0075433_10000793 3300006852 Bacteria 21889
65 Ga0075433_11297206 3300006852 Bacteria 631
66 Ga0075434_100545070 3300006871 Bacteria 1180
67 Ga0075429_100003159 3300006880 Bacteria 14000
68 Ga0075429_100020767 3300006880 Bacteria 5700
69 Ga0075429_100066311 3300006880 Bacteria 3143
70 Ga0075429_100186287 3300006880 Bacteria 1819
71 Ga0097620_100929256 3300006931 Bacteria 954
72 Ga0075435_100162655 3300007076 Bacteria 1881
73 Ga0111539_10000270 3300009094 Bacteria 62014
74 Ga0111539_10122512 3300009094 Bacteria 3047
75 Ga0111539_10704208 3300009094 Bacteria 1176
76 Ga0114129_10000371 3300009147 Bacteria 52193
77 Ga0114129_10000711 3300009147 Bacteria 42037
78 Ga0114129_10003630 3300009147 Bacteria 21711
79 Ga0114129_10010684 3300009147 Bacteria 13095
80 Ga0114129_10038539 3300009147 Bacteria 6741
81 Ga0114129_10081111 3300009147 Bacteria 4509
82 Ga0114129_10472243 3300009147 Bacteria 1642
83 Ga0114129_12672866 3300009147 Bacteria 595
84 Ga0105243_10547947 3300009148 Bacteria 1105
85 Ga0105241_10379236 3300009174 Bacteria 1235
86 Ga0105248_11422270 3300009177 Bacteria 785
87 Ga0105239_11339043 3300010375 Bacteria 826
88 Ga0105246_10503669 3300011119 Bacteria 1029
89 Ga0157375_10703656 3300013308 Bacteria 1164
90 Ga0207688_10214707 3300025901 Bacteria 1157
91 Ga0207699_10122449 3300025906 Bacteria 1685
92 Ga0207659_10722255 3300025926 Unclassified 854
93 Ga0207706_10399054 3300025933 Bacteria 1192
94 Ga0207669_10200988 3300025937 Bacteria 1447
95 Ga0207689_10036898 3300025942 Bacteria 4056
96 Ga0207661_10042582 3300025944 Bacteria 3580
97 Ga0207667_11054357 3300025949 Bacteria 798
98 Ga0207651_10212269 3300025960 Bacteria 1559
99 Ga0207651_10504231 3300025960 Unclassified 1047
100 Ga0207651_10882816 3300025960 Bacteria 796
101 Ga0207677_11061918 3300026023 Bacteria 737
102 Ga0207708_10402416 3300026075 Bacteria 1132
103 Ga0207648_11379538 3300026089 Bacteria 662
104 Ga0207675_100747630 3300026118 Unclassified 989
105 Ga0207683_10125787 3300026121 Bacteria 2304
106 Ga0209813_10016243 3300027866 Bacteria 2029
107 Ga0209813_10192429 3300027866 Bacteria 751
108 Ga0207428_10000614 3300027907 Bacteria 42141
109 Ga0307408_100039404 3300031548 Bacteria 3340
110 Ga0307408_100040115 3300031548 Bacteria 3314
111 Ga0307408_100120562 3300031548 Bacteria 2031
112 Ga0307405_10106627 3300031731 Bacteria 1890
113 Ga0307405_10570955 3300031731 Bacteria 918
114 Ga0307405_10594125 3300031731 Bacteria 902
115 Ga0307413_10210314 3300031824 Bacteria 1412
116 Ga0307413_10780281 3300031824 Bacteria 801
117 Ga0307410_10048750 3300031852 Bacteria 2839
118 Ga0307410_11033590 3300031852 Bacteria 710
119 Ga0307410_11965086 3300031852 Bacteria 521
120 Ga0307406_10090120 3300031901 Bacteria 2062
121 Ga0307407_10058879 3300031903 Bacteria 2235
122 Ga0307407_10849298 3300031903 Bacteria 697
123 Ga0307412_10034483 3300031911 Bacteria 3225
124 Ga0307412_10726582 3300031911 Bacteria 855
125 Ga0307409_100144920 3300031995 Bacteria 2052
126 Ga0307409_100446287 3300031995 Bacteria 1247
127 Ga0307409_101481737 3300031995 Bacteria 706
128 Ga0307416_100010484 3300032002 Bacteria 6122
129 Ga0307411_10017344 3300032005 Bacteria 4100
130 Ga0307411_10115287 3300032005 Bacteria 1932
131 Ga0307415_100224458 3300032126 Bacteria 1508
132 Ga0307415_100586698 3300032126 Bacteria 989
133 Ga0307415_100919881 3300032126 Bacteria 807
134 Ga0373926_0027861 3300035083 Bacteria 1981
135 Ga0373936_0448822 3300035113 Bacteria 596
136 Ga0373924_0154785 3300035410 Bacteria 1004
137 Ga0373935_0293139 3300035692 Bacteria 1148
138 Ga0373933_0026051 3300035724 Bacteria 3355
139 Ga0373947_0116245 3300035725 Bacteria 1696
140 Ga0373947_0432440 3300035725 Unclassified 890
141 Ga0373937_0061133 3300036401 Bacteria 3462
142 Ga0373937_0178179 3300036401 Bacteria 1996
143 Ga0373925_0113962 3300037068 Bacteria 2091
144 Ga0373925_0224379 3300037068 Bacteria 1501
145 Ga0451853_2739273 3300041512 Bacteria 574
146 Ga0439431_0017710 3300041997 Bacteria 1678
147 Ga0439433_0015220 3300041999 Bacteria 1698
148 Ga0439433_0032431 3300041999 Bacteria 1198
149 Ga0439443_079413 3300042003 Bacteria 608
150 Ga0439445_0019282 3300042004 Bacteria 1699
151 Ga0439449_0104607 3300042007 Bacteria 1047
152 Ga0439449_0259719 3300042007 Bacteria 653
153 Ga0439450_016959 3300042008 Bacteria 1512
154 Ga0439451_114526 3300042009 Bacteria 547
155 Ga0450923_125892 3300042125 Bacteria 607
156 Ga0450898_045487 3300042134 Unclassified 838
157 Ga0439446_0201991 3300042156 Bacteria 671
158 Ga0439446_0238110 3300042156 Bacteria 624
159 Ga0439435_0006155 3300042436 Bacteria 2684
160 Ga0439435_0132312 3300042436 Bacteria 789
161 Ga0439464_0008455 3300042439 Bacteria 2696
162 Ga0439460_0021226 3300042461 Bacteria 1773
163 Ga0439460_0135278 3300042461 Unclassified 815
164 Ga0495629_0374172 3300046459 Bacteria 970
165 Ga0495653_0358584 3300046463 Bacteria 936
166 Ga0495628_0886820 3300046516 Bacteria 620
167 Ga0495630_0163990 3300046517 Bacteria 1692
168 Ga0495652_0365448 3300046529 Bacteria 1030
169 Ga0495667_0355045 3300046559 Bacteria 926
170 Ga0495634_0188277 3300046642 Bacteria 1289
171 Ga0495658_0296129 3300046683 Unclassified 1023
172 Ga0495600_0317476 3300046809 Bacteria 980
173 Ga0495674_0118092 3300047319 Bacteria 2243
174 Ga0496101_0249856 3300048904 Bacteria 1382
175 Ga0496102_0030402 3300048905 Bacteria 4834
176 Ga0496103_0025545 3300048906 Bacteria 3571
177 Ga0496105_0508951 3300048908 Bacteria 944
178 Ga0496105_0756518 3300048908 Bacteria 742
179 Ga0496107_0365766 3300048910 Bacteria 1073
180 Ga0496110_0311233 3300048913 Bacteria 1434
181 Ga0496110_0624416 3300048913 Bacteria 976
182 Ga0496112_0006035 3300048915 Bacteria 10579
183 Ga0496112_1062910 3300048915 Unclassified 728
184 Ga0496114_0837294 3300048917 Bacteria 800
185 Ga0501292_010817 3300049515 Bacteria 1372
186 Ga0501299_009327 3300049522 Bacteria 1615
187 Ga0501303_002503 3300049526 Bacteria 1423
188 Ga0501034_0051421 3300049571 Bacteria 4154
189 Ga0501043_0887158 3300049579 Bacteria 640
190 Ga0501048_0906432 3300049582 Bacteria 634
191 Ga0501071_0747486 3300049587 Bacteria 753
192 Ga0501072_0154643 3300049588 Bacteria 1829
193 Ga0501076_0308857 3300049592 Bacteria 1297
194 Ga0501076_0670000 3300049592 Bacteria 856
195 Ga0501077_0353811 3300049593 Bacteria 937
196 Ga0501198_090336 3300049649 Bacteria 606
197 Ga0501208_051546 3300049655 Bacteria 786
198 Ga0501209_038429 3300049656 Bacteria 1254
199 Ga0501217_008890 3300049661 Bacteria 2178
200 Ga0501233_043903 3300049668 Bacteria 1061
201 Ga0501235_089485 3300049669 Unclassified 742
202 Ga0501247_066781 3300049677 Unclassified 561
203 Ga0501221_045972 3300049704 Unclassified 969
204 Ga0501268_009879 3300049765 Bacteria 1475
205 Ga0501272_020507 3300049769 Unclassified 792
206 Ga0501272_055902 3300049769 Bacteria 556
207 Ga0501273_005082 3300049770 Bacteria 1474
208 nmdc:mga03683_31715_c1 3300050489 Bacteria 2122
209 nmdc:mga00v17_11256_c1 3300050491 Bacteria 4915
210 nmdc:mga00v17_38550_c1 3300050491 Bacteria 2858
211 nmdc:mga0yw44_122314_c1 3300050492 Bacteria 1677
212 nmdc:mga0yw44_42814_c1 3300050492 Bacteria 2701
213 nmdc:mga0yw44_53248_c1 3300050492 Bacteria 2457
214 nmdc:mga0k408_120767_c1 3300050493 Bacteria 1552
215 nmdc:mga0k408_4987_c1 3300050493 Bacteria 7030
216 nmdc:mga06z11_15041_c1 3300050494 Bacteria 3445
217 nmdc:mga06z11_61940_c1 3300050494 Bacteria 1953
218 nmdc:mga06z11_696664_c1 3300050494 Bacteria 619
219 nmdc:mga04h51_107878_c1 3300050495 Bacteria 1023
220 nmdc:mga04h51_20594_c2 3300050495 Bacteria 1504
221 nmdc:mga07m45_863837_c1 3300050496 Unclassified 518
222 nmdc:mga05p37_123895_c1 3300050507 Bacteria 3175
223 nmdc:mga05p37_1314822_c1 3300050507 Bacteria 736
224 nmdc:mga05p37_1329_c1 3300050507 Bacteria 28742
225 nmdc:mga05p37_164897_c1 3300050507 Bacteria 2705
226 nmdc:mga05p37_2138_c1 3300050507 Bacteria 23074
227 nmdc:mga05p37_7234_c1 3300050507 Bacteria 13095
228 nmdc:mga05p37_862042_c1 3300050507 Bacteria 982
229 nmdc:mga09592_14289_c1 3300050508 Bacteria 6481
230 nmdc:mga09592_255503_c1 3300050508 Bacteria 1519
231 nmdc:mga09592_436294_c1 3300050508 Bacteria 1130
232 nmdc:mga09592_544_c1 3300050508 Bacteria 28604
233 nmdc:mga0qj67_121539_c1 3300050509 Bacteria 2113
234 nmdc:mga0qj67_301696_c1 3300050509 Bacteria 1298
235 nmdc:mga0qj67_38608_c1 3300050509 Bacteria 3747
236 nmdc:mga0qj67_44852_c1 3300050509 Bacteria 3487
237 nmdc:mga0qj67_885456_c1 3300050509 Bacteria 704
238 nmdc:mga06r32_12084_c1 3300050510 Bacteria 7785
239 nmdc:mga06r32_12811_c1 3300050510 Bacteria 7580
240 nmdc:mga06r32_318508_c1 3300050510 Bacteria 1541
241 nmdc:mga06r32_50197_c1 3300050510 Bacteria 1435
242 nmdc:mga06r32_87417_c1 3300050510 Bacteria 3042
243 nmdc:mga08y16_146_c1 3300050511 Bacteria 61071
244 nmdc:mga08y16_253382_c1 3300050511 Bacteria 1819
245 nmdc:mga08y16_481088_c1 3300050511 Bacteria 1263
246 nmdc:mga0a205_1105214_c1 3300050515 Bacteria 640
247 nmdc:mga0a205_16272_c1 3300050515 Bacteria 6964
248 nmdc:mga0a205_35374_c1 3300050515 Bacteria 4796
249 Ga0495601_0072729 3300053077 Bacteria 2197
250 Ga0495619_0034975 3300053085 Bacteria 3267
251 Ga0495619_0318293 3300053085 Bacteria 1077
252 Ga0500628_023759 3300053129 Bacteria 1266
253 Ga0590071_005104 3300059421 Bacteria 3168
254 Ga0590075_016479 3300059424 Bacteria 1818
255 Ga0590077_034219 3300059426 Bacteria 1116
256 Ga0530510_0436190 3300061734 Bacteria 990

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049587 Ga0501071_0747486 Ga0501071_0747486_40_423 113
2 3300042436 Ga0439435_0132312 Ga0439435_0132312_355_747 115
3 3300005617 Ga0068859_100929285 Ga0068859_1009292852 116
4 3300006931 Ga0097620_100929256 Ga0097620_1009292562 116
5 3300025901 Ga0207688_10214707 Ga0207688_102147072 118
6 3300005345 Ga0070692_11047647 Ga0070692_110476472 120
7 3300042461 Ga0439460_0135278 Ga0439460_0135278_239_685 120
8 3300048913 Ga0496110_0311233 Ga0496110_0311233_1006_1422 122
9 3300049769 Ga0501272_055902 Ga0501272_055902_15_428 122
10 3300009147 Ga0114129_10010684 Ga0114129_100106848 123
11 3300048908 Ga0496105_0508951 Ga0496105_0508951_184_651 123
12 3300050507 nmdc:mga05p37_7234_c1 nmdc:mga05p37_7234_c1_9147_9566 123
13 3300005719 Ga0068861_101083127 Ga0068861_1010831271 124
14 3300041999 Ga0439433_0032431 Ga0439433_0032431_444_863 124
15 3300042007 Ga0439449_0259719 Ga0439449_0259719_154_573 124
16 3300035113 Ga0373936_0448822 Ga0373936_0448822_118_537 125
17 3300006844 Ga0075428_100138063 Ga0075428_1001380632 127
18 3300006846 Ga0075430_100008552 Ga0075430_1000085527 127
19 3300009147 Ga0114129_10000711 Ga0114129_1000071126 127
20 3300042009 Ga0439451_114526 Ga0439451_114526_102_530 127
21 3300042461 Ga0439460_0021226 Ga0439460_0021226_1113_1541 127
22 3300050507 nmdc:mga05p37_123895_c1 nmdc:mga05p37_123895_c1_487_915 127
23 3300050509 nmdc:mga0qj67_38608_c1 nmdc:mga0qj67_38608_c1_2666_3094 127
24 3300050510 nmdc:mga06r32_318508_c1 nmdc:mga06r32_318508_c1_789_1217 127
25 3300059421 Ga0590071_005104 Ga0590071_005104_2046_2471 127
26 3300059426 Ga0590077_034219 Ga0590077_034219_71_496 127
27 3300005336 Ga0070680_101210629 Ga0070680_1012106292 128
28 3300005458 Ga0070681_10066625 Ga0070681_100666254 128
29 3300006846 Ga0075430_100486840 Ga0075430_1004868402 128
30 3300006847 Ga0075431_100567945 Ga0075431_1005679452 128
31 3300009147 Ga0114129_12672866 Ga0114129_126728661 128
32 3300049579 Ga0501043_0887158 Ga0501043_0887158_148_582 128
33 3300049592 Ga0501076_0670000 Ga0501076_0670000_50_484 128
34 3300050509 nmdc:mga0qj67_885456_c1 nmdc:mga0qj67_885456_c1_235_666 128
35 3300050510 nmdc:mga06r32_50197_c1 nmdc:mga06r32_50197_c1_647_1084 128
36 3300061734 Ga0530510_0436190 Ga0530510_0436190_126_560 128
37 3300005354 Ga0070675_100868497 Ga0070675_1008684972 129
38 3300005364 Ga0070673_100815519 Ga0070673_1008155191 129
39 3300006844 Ga0075428_100000792 Ga0075428_10000079219 129
40 3300006844 Ga0075428_100569587 Ga0075428_1005695872 129
41 3300006846 Ga0075430_100050436 Ga0075430_1000504362 129
42 3300006846 Ga0075430_100157559 Ga0075430_1001575592 129
43 3300006847 Ga0075431_100001335 Ga0075431_1000013357 129
44 3300006847 Ga0075431_100065716 Ga0075431_1000657162 129
45 3300006852 Ga0075433_10000793 Ga0075433_1000079319 129
46 3300006880 Ga0075429_100003159 Ga0075429_1000031597 129
47 3300006880 Ga0075429_100020767 Ga0075429_1000207674 129
48 3300006880 Ga0075429_100066311 Ga0075429_1000663113 129
49 3300009094 Ga0111539_10000270 Ga0111539_1000027022 129
50 3300009094 Ga0111539_10122512 Ga0111539_101225124 129
51 3300009094 Ga0111539_10704208 Ga0111539_107042082 129
52 3300009147 Ga0114129_10000371 Ga0114129_1000037119 129
53 3300009147 Ga0114129_10003630 Ga0114129_1000363011 129
54 3300009147 Ga0114129_10081111 Ga0114129_100811115 129
55 3300025926 Ga0207659_10722255 Ga0207659_107222552 129
56 3300027907 Ga0207428_10000614 Ga0207428_1000061431 129
57 3300031548 Ga0307408_100039404 Ga0307408_1000394043 129
58 3300031731 Ga0307405_10570955 Ga0307405_105709552 129
59 3300031901 Ga0307406_10090120 Ga0307406_100901202 129
60 3300031903 Ga0307407_10849298 Ga0307407_108492982 129
61 3300031995 Ga0307409_101481737 Ga0307409_1014817371 129
62 3300032002 Ga0307416_100010484 Ga0307416_1000104844 129
63 3300032005 Ga0307411_10115287 Ga0307411_101152872 129
64 3300032126 Ga0307415_100919881 Ga0307415_1009198812 129
65 3300035692 Ga0373935_0293139 Ga0373935_0293139_108_539 129
66 3300042003 Ga0439443_079413 Ga0439443_079413_150_587 129
67 3300042008 Ga0439450_016959 Ga0439450_016959_80_517 129
68 3300042439 Ga0439464_0008455 Ga0439464_0008455_1971_2408 129
69 3300049515 Ga0501292_010817 Ga0501292_010817_796_1233 129
70 3300049522 Ga0501299_009327 Ga0501299_009327_1002_1439 129
71 3300049526 Ga0501303_002503 Ga0501303_002503_390_827 129
72 3300049649 Ga0501198_090336 Ga0501198_090336_77_514 129
73 3300049655 Ga0501208_051546 Ga0501208_051546_171_608 129
74 3300049661 Ga0501217_008890 Ga0501217_008890_1571_2008 129
75 3300049765 Ga0501268_009879 Ga0501268_009879_22_459 129
76 3300050507 nmdc:mga05p37_1314822_c1 nmdc:mga05p37_1314822_c1_161_598 129
77 3300050507 nmdc:mga05p37_1329_c1 nmdc:mga05p37_1329_c1_18422_18859 129
78 3300050507 nmdc:mga05p37_164897_c1 nmdc:mga05p37_164897_c1_323_760 129
79 3300050508 nmdc:mga09592_14289_c1 nmdc:mga09592_14289_c1_2983_3420 129
80 3300050508 nmdc:mga09592_544_c1 nmdc:mga09592_544_c1_25341_25778 129
81 3300050509 nmdc:mga0qj67_121539_c1 nmdc:mga0qj67_121539_c1_1094_1531 129
82 3300050509 nmdc:mga0qj67_44852_c1 nmdc:mga0qj67_44852_c1_1048_1485 129
83 3300050510 nmdc:mga06r32_12084_c1 nmdc:mga06r32_12084_c1_6621_7058 129
84 3300050510 nmdc:mga06r32_12811_c1 nmdc:mga06r32_12811_c1_1517_1954 129
85 3300050511 nmdc:mga08y16_146_c1 nmdc:mga08y16_146_c1_43291_43728 129
86 3300050511 nmdc:mga08y16_253382_c1 nmdc:mga08y16_253382_c1_909_1346 129
87 3300050511 nmdc:mga08y16_481088_c1 nmdc:mga08y16_481088_c1_614_1051 129
88 3300050515 nmdc:mga0a205_16272_c1 nmdc:mga0a205_16272_c1_5773_6210 129
89 3300005290 Ga0065712_10122217 Ga0065712_101222172 130
90 3300005290 Ga0065712_10147242 Ga0065712_101472422 130
91 3300005293 Ga0065715_10095686 Ga0065715_100956864 130
92 3300005293 Ga0065715_10664094 Ga0065715_106640941 130
93 3300005347 Ga0070668_101291653 Ga0070668_1012916531 130
94 3300005364 Ga0070673_100567228 Ga0070673_1005672282 130
95 3300006237 Ga0097621_100497485 Ga0097621_1004974852 130
96 3300006844 Ga0075428_100019379 Ga0075428_10001937911 130
97 3300006844 Ga0075428_100916859 Ga0075428_1009168592 130
98 3300006846 Ga0075430_100007336 Ga0075430_1000073364 130
99 3300006880 Ga0075429_100186287 Ga0075429_1001862872 130
100 3300009147 Ga0114129_10038539 Ga0114129_100385399 130
101 3300013308 Ga0157375_10703656 Ga0157375_107036562 130
102 3300025933 Ga0207706_10399054 Ga0207706_103990542 130
103 3300025937 Ga0207669_10200988 Ga0207669_102009882 130
104 3300025960 Ga0207651_10212269 Ga0207651_102122692 130
105 3300026121 Ga0207683_10125787 Ga0207683_101257873 130
106 3300031852 Ga0307410_11033590 Ga0307410_110335902 130
107 3300031903 Ga0307407_10058879 Ga0307407_100588792 130
108 3300031911 Ga0307412_10726582 Ga0307412_107265822 130
109 3300041512 Ga0451853_2739273 Ga0451853_2739273_41_481 130
110 3300046459 Ga0495629_0374172 Ga0495629_0374172_402_842 130
111 3300048904 Ga0496101_0249856 Ga0496101_0249856_699_1139 130
112 3300048905 Ga0496102_0030402 Ga0496102_0030402_883_1323 130
113 3300048906 Ga0496103_0025545 Ga0496103_0025545_1789_2229 130
114 3300048908 Ga0496105_0756518 Ga0496105_0756518_154_594 130
115 3300048910 Ga0496107_0365766 Ga0496107_0365766_66_506 130
116 3300048915 Ga0496112_0006035 Ga0496112_0006035_3712_4152 130
117 3300048917 Ga0496114_0837294 Ga0496114_0837294_220_660 130
118 3300049582 Ga0501048_0906432 Ga0501048_0906432_146_586 130
119 3300049588 Ga0501072_0154643 Ga0501072_0154643_549_1001 130
120 3300049592 Ga0501076_0308857 Ga0501076_0308857_271_723 130
121 3300050507 nmdc:mga05p37_2138_c1 nmdc:mga05p37_2138_c1_21298_21738 130
122 3300050508 nmdc:mga09592_255503_c1 nmdc:mga09592_255503_c1_633_1073 130
123 3300050509 nmdc:mga0qj67_301696_c1 nmdc:mga0qj67_301696_c1_494_934 130
124 3300050510 nmdc:mga06r32_87417_c1 nmdc:mga06r32_87417_c1_438_878 130
125 3300005337 Ga0070682_100242227 Ga0070682_1002422272 131
126 3300005364 Ga0070673_100862459 Ga0070673_1008624592 131
127 3300005539 Ga0068853_101758284 Ga0068853_1017582841 131
128 3300005546 Ga0070696_100072760 Ga0070696_1000727602 131
129 3300005547 Ga0070693_100013797 Ga0070693_1000137972 131
130 3300005615 Ga0070702_100741558 Ga0070702_1007415582 131
131 3300006178 Ga0075367_10021266 Ga0075367_100212662 131
132 3300006195 Ga0075366_10001334 Ga0075366_1000133410 131
133 3300006353 Ga0075370_10109973 Ga0075370_101099732 131
134 3300006852 Ga0075433_11297206 Ga0075433_112972062 131
135 3300009147 Ga0114129_10472243 Ga0114129_104722432 131
136 3300009148 Ga0105243_10547947 Ga0105243_105479472 131
137 3300009174 Ga0105241_10379236 Ga0105241_103792361 131
138 3300010375 Ga0105239_11339043 Ga0105239_113390432 131
139 3300011119 Ga0105246_10503669 Ga0105246_105036691 131
140 3300025960 Ga0207651_10882816 Ga0207651_108828162 131
141 3300026075 Ga0207708_10402416 Ga0207708_104024162 131
142 3300026118 Ga0207675_100747630 Ga0207675_1007476302 131
143 3300031548 Ga0307408_100120562 Ga0307408_1001205622 131
144 3300031731 Ga0307405_10106627 Ga0307405_101066272 131
145 3300031824 Ga0307413_10210314 Ga0307413_102103142 131
146 3300031852 Ga0307410_10048750 Ga0307410_100487503 131
147 3300031911 Ga0307412_10034483 Ga0307412_100344832 131
148 3300031995 Ga0307409_100446287 Ga0307409_1004462872 131
149 3300032005 Ga0307411_10017344 Ga0307411_100173442 131
150 3300032126 Ga0307415_100224458 Ga0307415_1002244582 131
151 3300042156 Ga0439446_0201991 Ga0439446_0201991_171_611 131
152 3300042436 Ga0439435_0006155 Ga0439435_0006155_1244_1684 131
153 3300049593 Ga0501077_0353811 Ga0501077_0353811_278_721 131
154 3300049669 Ga0501235_089485 Ga0501235_089485_23_469 131
155 3300049677 Ga0501247_066781 Ga0501247_066781_77_523 131
156 3300049704 Ga0501221_045972 Ga0501221_045972_122_568 131
157 3300049769 Ga0501272_020507 Ga0501272_020507_23_469 131
158 3300050493 nmdc:mga0k408_120767_c1 nmdc:mga0k408_120767_c1_636_1079 131
159 3300050494 nmdc:mga06z11_61940_c1 nmdc:mga06z11_61940_c1_609_1052 131
160 3300050496 nmdc:mga07m45_863837_c1 nmdc:mga07m45_863837_c1_38_481 131
161 3300050507 nmdc:mga05p37_862042_c1 nmdc:mga05p37_862042_c1_67_513 131
162 3300050508 nmdc:mga09592_436294_c1 nmdc:mga09592_436294_c1_640_1086 131
163 3300050515 nmdc:mga0a205_1105214_c1 nmdc:mga0a205_1105214_c1_149_589 131
164 3300050515 nmdc:mga0a205_35374_c1 nmdc:mga0a205_35374_c1_2504_2950 131
165 3300006871 Ga0075434_100545070 Ga0075434_1005450701 132
166 3300007076 Ga0075435_100162655 Ga0075435_1001626552 132
167 3300026089 Ga0207648_11379538 Ga0207648_113795382 132
168 3300035725 Ga0373947_0432440 Ga0373947_0432440_184_627 132
169 3300046683 Ga0495658_0296129 Ga0495658_0296129_123_566 132
170 3300059424 Ga0590075_016479 Ga0590075_016479_256_696 132
171 3300005366 Ga0070659_100589978 Ga0070659_1005899782 133
172 3300005436 Ga0070713_100004905 Ga0070713_1000049057 133
173 3300006028 Ga0070717_10042788 Ga0070717_100427883 133
174 3300006175 Ga0070712_100919139 Ga0070712_1009191392 133
175 3300025906 Ga0207699_10122449 Ga0207699_101224492 133
176 3300031548 Ga0307408_100040115 Ga0307408_1000401152 133
177 3300031731 Ga0307405_10594125 Ga0307405_105941252 133
178 3300031824 Ga0307413_10780281 Ga0307413_107802812 133
179 3300031852 Ga0307410_11965086 Ga0307410_119650861 133
180 3300031995 Ga0307409_100144920 Ga0307409_1001449202 133
181 3300032126 Ga0307415_100586698 Ga0307415_1005866982 133
182 3300035083 Ga0373926_0027861 Ga0373926_0027861_1069_1512 133
183 3300035410 Ga0373924_0154785 Ga0373924_0154785_429_872 133
184 3300035724 Ga0373933_0026051 Ga0373933_0026051_1200_1643 133
185 3300035725 Ga0373947_0116245 Ga0373947_0116245_526_969 133
186 3300036401 Ga0373937_0061133 Ga0373937_0061133_1139_1582 133
187 3300037068 Ga0373925_0113962 Ga0373925_0113962_68_511 133
188 3300046463 Ga0495653_0358584 Ga0495653_0358584_209_652 133
189 3300046529 Ga0495652_0365448 Ga0495652_0365448_368_811 133
190 3300047319 Ga0495674_0118092 Ga0495674_0118092_1616_2059 133
191 3300049656 Ga0501209_038429 Ga0501209_038429_146_601 133
192 3300049668 Ga0501233_043903 Ga0501233_043903_286_741 133
193 3300049770 Ga0501273_005082 Ga0501273_005082_952_1407 133
194 3300053077 Ga0495601_0072729 Ga0495601_0072729_453_896 133
195 3300036401 Ga0373937_0178179 Ga0373937_0178179_1322_1768 134
196 3300037068 Ga0373925_0224379 Ga0373925_0224379_254_700 134
197 3300046516 Ga0495628_0886820 Ga0495628_0886820_136_582 134
198 3300046517 Ga0495630_0163990 Ga0495630_0163990_250_696 134
199 3300046559 Ga0495667_0355045 Ga0495667_0355045_54_500 134
200 3300046642 Ga0495634_0188277 Ga0495634_0188277_493_939 134
201 3300046809 Ga0495600_0317476 Ga0495600_0317476_19_465 134
202 3300049571 Ga0501034_0051421 Ga0501034_0051421_1017_1463 134
203 3300053085 Ga0495619_0034975 Ga0495619_0034975_2206_2652 134
204 3300005329 Ga0070683_100009743 Ga0070683_1000097434 135
205 3300005458 Ga0070681_10329778 Ga0070681_103297782 135
206 3300005535 Ga0070684_100136282 Ga0070684_1001362822 135
207 3300025944 Ga0207661_10042582 Ga0207661_100425822 135
208 3300025949 Ga0207667_11054357 Ga0207667_110543572 135
209 3300025960 Ga0207651_10504231 Ga0207651_105042312 135
210 3300042125 Ga0450923_125892 Ga0450923_125892_82_531 135
211 3300048915 Ga0496112_1062910 Ga0496112_1062910_77_529 135
212 3300053085 Ga0495619_0318293 Ga0495619_0318293_278_727 135
213 3300005338 Ga0068868_100184438 Ga0068868_1001844383 137
214 3300005340 Ga0070689_101876995 Ga0070689_1018769951 137
215 3300005841 Ga0068863_100392712 Ga0068863_1003927122 137
216 3300006038 Ga0075365_10058818 Ga0075365_100588182 137
217 3300006038 Ga0075365_10064168 Ga0075365_100641684 137
218 3300006042 Ga0075368_10016483 Ga0075368_100164832 137
219 3300006051 Ga0075364_10038494 Ga0075364_100384942 137
220 3300006051 Ga0075364_10073539 Ga0075364_100735394 137
221 3300006177 Ga0075362_10001037 Ga0075362_100010376 137
222 3300006178 Ga0075367_10063034 Ga0075367_100630342 137
223 3300006195 Ga0075366_10028190 Ga0075366_100281903 137
224 3300006237 Ga0097621_100308220 Ga0097621_1003082202 137
225 3300006353 Ga0075370_10051170 Ga0075370_100511702 137
226 3300026023 Ga0207677_11061918 Ga0207677_110619182 137
227 3300027866 Ga0209813_10016243 Ga0209813_100162432 137
228 3300027866 Ga0209813_10192429 Ga0209813_101924292 137
229 3300050489 nmdc:mga03683_31715_c1 nmdc:mga03683_31715_c1_1522_1977 137
230 3300050491 nmdc:mga00v17_11256_c1 nmdc:mga00v17_11256_c1_1463_1918 137
231 3300050491 nmdc:mga00v17_38550_c1 nmdc:mga00v17_38550_c1_2380_2835 137
232 3300050492 nmdc:mga0yw44_122314_c1 nmdc:mga0yw44_122314_c1_449_904 137
233 3300050492 nmdc:mga0yw44_42814_c1 nmdc:mga0yw44_42814_c1_848_1303 137
234 3300050493 nmdc:mga0k408_4987_c1 nmdc:mga0k408_4987_c1_3730_4185 137
235 3300050494 nmdc:mga06z11_15041_c1 nmdc:mga06z11_15041_c1_1310_1765 137
236 3300050495 nmdc:mga04h51_107878_c1 nmdc:mga04h51_107878_c1_456_911 137
237 3300050495 nmdc:mga04h51_20594_c2 nmdc:mga04h51_20594_c2_190_645 137
238 3300005290 Ga0065712_10072577 Ga0065712_100725774 138
239 3300005334 Ga0068869_100013758 Ga0068869_1000137585 138
240 3300005440 Ga0070705_100380779 Ga0070705_1003807792 138
241 3300006038 Ga0075365_10029337 Ga0075365_100293371 138
242 3300006042 Ga0075368_10211873 Ga0075368_102118732 138
243 3300006051 Ga0075364_10003027 Ga0075364_100030278 138
244 3300006195 Ga0075366_10268906 Ga0075366_102689062 138
245 3300009177 Ga0105248_11422270 Ga0105248_114222702 138
246 3300025942 Ga0207689_10036898 Ga0207689_100368985 138
247 3300041997 Ga0439431_0017710 Ga0439431_0017710_1084_1545 138
248 3300041999 Ga0439433_0015220 Ga0439433_0015220_961_1422 138
249 3300042004 Ga0439445_0019282 Ga0439445_0019282_668_1129 138
250 3300042007 Ga0439449_0104607 Ga0439449_0104607_101_562 138
251 3300042134 Ga0450898_045487 Ga0450898_045487_205_666 138
252 3300042156 Ga0439446_0238110 Ga0439446_0238110_26_487 138
253 3300048913 Ga0496110_0624416 Ga0496110_0624416_370_828 138
254 3300050492 nmdc:mga0yw44_53248_c1 nmdc:mga0yw44_53248_c1_1294_1752 138
255 3300050494 nmdc:mga06z11_696664_c1 nmdc:mga06z11_696664_c1_137_595 138
256 3300053129 Ga0500628_023759 Ga0500628_023759_72_530 138

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

14

126

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nhm-assembly1.cif.gz_A crystal structure of a response regulator from myxococcus xanthus 0.9542 11 114
2v0n-assembly1.cif.gz_B activated response regulator pled in complex with c-digmp and gtp- alpha-s 0.9455 10 113
6rh1-assembly1.cif.gz_C revisiting ph-gated conformational switch. complex hk853-rr468 d53a ph 7 0.9413 10 115
3grc-assembly5.cif.gz_C crystal structure of a sensor protein from polaromonas sp. js666 0.9389 11 115
3t6k-assembly2.cif.gz_B crystal structure of a putative response regulator (caur_3799) from chloroflexus aurantiacus j-10-fl at 1.86 a resolution 0.9366 9 114
ID Description Score Start End Superfamily
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9767 12 91 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.969 11 91 3.40.50.2300
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9679 8 91 3.40.50.2300
af_P0AFJ5_1_84_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9641 10 91 3.40.50.2300
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9588 11 91 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A3C1EMT3-F1-model_v4 Response regulatory domain-containing protein 0.9738 10 114 GO:0000160
AF-A0A2S6R4N5-F1-model_v4 Phosphate regulon transcriptional regulatory protein PhoB 0.9733 10 114 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A832MDZ5-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9728 10 114 GO:0000155
AF-A0A3B9ZHB1-F1-model_v4 Response regulator 0.9727 10 116 GO:0000160
AF-A0A2N5K187-F1-model_v4 Diguanylate cyclase 0.9721 10 114 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
79.88 0.73 High
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Predicted Structure (AlphaFold2)

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