F366069

General Info

Members Datasets Scaffolds Average Seq Length
255 158 254 481

Family's Representative Sequence

Representative Sequence 3300053119|Ga0500595_000023|Ga0500595_000023_108179_109732
Length 517
Sequence MVCATYFFVLKQVQQRTAMTTSRVTTKFPAPVYRDTVLAPVFADAKKYFLDPLLEIEYVHTLMLARQGIMPEGEAAQCLHALDTLDRDEIRTAEYDGSFEDLFFYIEKKLAAACGEEVAGKMHTARSRNDIDLTMYRMVLRGRLLGTFTALLQLRQLLVELAWEYRATLMPAYTHNQPAQPTTLGHYLMAYIEILERDAERVRQAFARVNRNPLGACAITTTGFPIDRNFTEALLGFEGLQVNSYGAIAAVDYVAESCGVLATAMLSLGRFAQDLLLWSTAEFGYLRLSDAYVQISSIMPQKRNPVPLEHVRVLASRALMQSQAVLGSLHNTPFADMNDAEDDLQPLVYTAFDDGERSLRLLAGALSEAEFNTERMAVAADGNFLPVTELADTLVRATGMSFHASHKIVSKGVRELSAGYDVAVMTEIVVRELNAVGKGASVSREQIREALSAKNFVAVRKIPGGPALDALEPEILRAKEQASADERWLKETEKKLAEAREMMKRECSALLRRANGS

Samples

Sample ID Description Type Environment
1 2884215851 Edaphobacter sp. 12200R-103 Isolate Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
83 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
84 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
85 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
86 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
94 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
98 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
104 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
105 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
106 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
107 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
113 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
114 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
115 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
116 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
117 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
118 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
125 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
126 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
127 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
128 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
129 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
136 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
137 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
140 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
151 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
156 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
157 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
158 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.61
Metatranscriptomes 0
Isolates 0.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.18
Nodule 0
Rhizoplane 1.18
Rhizosphere 95.69
Stem 0
Stem Tuber 0
Unclassified 1.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10069060 3300005327 Bacteria 2890
2 Ga0070683_100000543 3300005329 Bacteria 26676
3 Ga0070683_100017820 3300005329 Bacteria 6277
4 Ga0070683_100023221 3300005329 Bacteria 5546
5 Ga0070683_100067060 3300005329 Unclassified 3342
6 Ga0070690_100032405 3300005330 Bacteria 3264
7 Ga0070670_100096443 3300005331 Bacteria 2544
8 Ga0070680_100030207 3300005336 Bacteria 4353
9 Ga0070689_100040864 3300005340 Bacteria 3557
10 Ga0070691_10004727 3300005341 Bacteria 6199
11 Ga0070661_100074973 3300005344 Bacteria 2492
12 Ga0070661_100105867 3300005344 Bacteria 2097
13 Ga0070671_100005785 3300005355 Bacteria 9849
14 Ga0070674_100000323 3300005356 Bacteria 23619
15 Ga0070674_100007518 3300005356 Bacteria 6432
16 Ga0070714_100000350 3300005435 Bacteria 34659
17 Ga0070713_100005522 3300005436 Bacteria 8658
18 Ga0070678_100004212 3300005456 Bacteria 8123
19 Ga0070662_100126201 3300005457 Bacteria 1967
20 Ga0070681_10013005 3300005458 Bacteria 8265
21 Ga0070681_10225862 3300005458 Bacteria 1787
22 Ga0070698_100022301 3300005471 Bacteria 6624
23 Ga0070679_100006210 3300005530 Bacteria 11129
24 Ga0070684_100000266 3300005535 Bacteria 36086
25 Ga0070684_100012362 3300005535 Bacteria 6838
26 Ga0070684_100031798 3300005535 Bacteria 4495
27 Ga0068853_100009137 3300005539 Bacteria 7983
28 Ga0070665_100005372 3300005548 Bacteria 13229
29 Ga0070665_100030511 3300005548 Bacteria 5423
30 Ga0070665_100097623 3300005548 Bacteria 2942
31 Ga0068855_100002810 3300005563 Bacteria 21421
32 Ga0068855_100039647 3300005563 Bacteria 5591
33 Ga0068855_100055572 3300005563 Bacteria 4649
34 Ga0068855_100116158 3300005563 Bacteria 3067
35 Ga0068855_100258669 3300005563 Bacteria 1940
36 Ga0068857_100002114 3300005577 Bacteria 16152
37 Ga0068857_100003275 3300005577 Bacteria 13456
38 Ga0068856_100018400 3300005614 Bacteria 6771
39 Ga0068856_100070735 3300005614 Unclassified 3452
40 Ga0068856_100095369 3300005614 Bacteria 2963
41 Ga0068856_100290057 3300005614 Archaea 1653
42 Ga0068859_100042759 3300005617 Bacteria 4552
43 Ga0068859_100238595 3300005617 Bacteria 1907
44 Ga0068858_100071858 3300005842 Bacteria 3210
45 Ga0068860_100008862 3300005843 Bacteria 10023
46 Ga0068860_100083073 3300005843 Bacteria 3046
47 Ga0070717_10143365 3300006028 Bacteria 2062
48 Ga0070716_100000269 3300006173 Bacteria 20898
49 Ga0068871_100021968 3300006358 Bacteria 4915
50 Ga0068871_100040206 3300006358 Unclassified 3745
51 Ga0075436_100030200 3300006914 Bacteria 3730
52 Ga0097620_100042759 3300006931 Bacteria 4552
53 Ga0099794_10010282 3300007265 Unclassified 3966
54 Ga0105240_10003354 3300009093 Bacteria 24916
55 Ga0105240_10010677 3300009093 Bacteria 12887
56 Ga0105240_10013353 3300009093 Bacteria 11284
57 Ga0105240_10045822 3300009093 Bacteria 5546
58 Ga0105240_10088867 3300009093 Bacteria 3780
59 Ga0105240_10180851 3300009093 Bacteria 2488
60 Ga0105240_10212966 3300009093 Bacteria 2256
61 Ga0105240_10227325 3300009093 Bacteria 2170
62 Ga0105245_10004261 3300009098 Bacteria 12680
63 Ga0105245_10021264 3300009098 Bacteria 5689
64 Ga0105245_10221555 3300009098 Bacteria 1826
65 Ga0105241_10002056 3300009174 Bacteria 15202
66 Ga0105241_10004622 3300009174 Bacteria 10183
67 Ga0105241_10053614 3300009174 Unclassified 3085
68 Ga0105242_10010681 3300009176 Bacteria 7048
69 Ga0105242_10013236 3300009176 Bacteria 6369
70 Ga0105242_10118390 3300009176 Bacteria 2269
71 Ga0105242_10152857 3300009176 Bacteria 2014
72 Ga0105248_10014866 3300009177 Bacteria 8573
73 Ga0105248_10019570 3300009177 Bacteria 7492
74 Ga0105248_10022757 3300009177 Bacteria 6955
75 Ga0105248_10131300 3300009177 Bacteria 2826
76 Ga0105248_10246756 3300009177 Bacteria 2010
77 Ga0105237_10001784 3300009545 Bacteria 27828
78 Ga0105237_10013933 3300009545 Bacteria 8413
79 Ga0105237_10059577 3300009545 Bacteria 3819
80 Ga0105237_10093041 3300009545 Bacteria 3004
81 Ga0105238_10001038 3300009551 Bacteria 28173
82 Ga0105238_10022175 3300009551 Bacteria 6476
83 Ga0105238_10152806 3300009551 Bacteria 2283
84 Ga0105238_10167001 3300009551 Bacteria 2177
85 Ga0105249_10004444 3300009553 Bacteria 12133
86 Ga0105239_10013356 3300010375 Bacteria 9122
87 Ga0105246_10004532 3300011119 Bacteria 8452
88 Ga0157370_10001347 3300013104 Bacteria 30496
89 Ga0157370_10010328 3300013104 Bacteria 9850
90 Ga0157369_10000948 3300013105 Bacteria 36843
91 Ga0157369_10003125 3300013105 Bacteria 19791
92 Ga0157369_10033956 3300013105 Bacteria 5602
93 Ga0157374_10003508 3300013296 Bacteria 13188
94 Ga0157374_10041227 3300013296 Bacteria 4254
95 Ga0157378_10007020 3300013297 Bacteria 9829
96 Ga0163162_10051014 3300013306 Bacteria 4150
97 Ga0157372_10001815 3300013307 Bacteria 23158
98 Ga0163163_10005034 3300014325 Bacteria 11390
99 Ga0163163_10069604 3300014325 Unclassified 3503
100 Ga0163163_10114382 3300014325 Bacteria 2729
101 Ga0163163_10378353 3300014325 Bacteria 1473
102 Ga0157380_10164960 3300014326 Bacteria 1929
103 Ga0157379_10006558 3300014968 Bacteria 10042
104 Ga0157376_10135000 3300014969 Unclassified 2207
105 Ga0207654_10002874 3300025911 Bacteria 8738
106 Ga0207707_10001833 3300025912 Bacteria 19492
107 Ga0207695_10000509 3300025913 Bacteria 82842
108 Ga0207695_10002790 3300025913 Bacteria 25427
109 Ga0207695_10004088 3300025913 Bacteria 20048
110 Ga0207695_10015145 3300025913 Bacteria 9094
111 Ga0207671_10068917 3300025914 Bacteria 2636
112 Ga0207660_10006326 3300025917 Bacteria 7677
113 Ga0207660_10022906 3300025917 Bacteria 4212
114 Ga0207652_10000647 3300025921 Bacteria 34325
115 Ga0207694_10000510 3300025924 Bacteria 35229
116 Ga0207694_10004788 3300025924 Bacteria 10505
117 Ga0207687_10003158 3300025927 Bacteria 11180
118 Ga0207687_10006057 3300025927 Bacteria 8002
119 Ga0207687_10007979 3300025927 Bacteria 6931
120 Ga0207690_10063143 3300025932 Bacteria 2525
121 Ga0207706_10144656 3300025933 Bacteria 2092
122 Ga0207686_10043880 3300025934 Bacteria 2742
123 Ga0207686_10116038 3300025934 Bacteria 1814
124 Ga0207670_10072060 3300025936 Bacteria 2391
125 Ga0207665_10000015 3300025939 Bacteria 133147
126 Ga0207711_10002641 3300025941 Bacteria 15853
127 Ga0207711_10025892 3300025941 Bacteria 4920
128 Ga0207689_10026853 3300025942 Unclassified 4819
129 Ga0207661_10001124 3300025944 Bacteria 17843
130 Ga0207661_10009512 3300025944 Bacteria 6975
131 Ga0207661_10024890 3300025944 Bacteria 4544
132 Ga0207667_10001646 3300025949 Bacteria 28149
133 Ga0207667_10026730 3300025949 Bacteria 6298
134 Ga0207703_10064167 3300026035 Bacteria 3014
135 Ga0207639_10051096 3300026041 Unclassified 3143
136 Ga0207639_10079957 3300026041 Bacteria 2585
137 Ga0207702_10005800 3300026078 Bacteria 10741
138 Ga0207648_10055042 3300026089 Bacteria 3474
139 Ga0207676_10030167 3300026095 Bacteria 4068
140 Ga0207674_10005378 3300026116 Bacteria 15233
141 Ga0207674_10007092 3300026116 Bacteria 13096
142 Ga0268266_10001740 3300028379 Bacteria 24891
143 Ga0268266_10006076 3300028379 Bacteria 11125
144 Ga0268264_10141370 3300028381 Bacteria 2147
145 Ga0268264_10174667 3300028381 Unclassified 1946
146 Ga0265338_10121944 3300028800 Bacteria 2076
147 Ga0265313_10006536 3300031595 Bacteria 8227
148 Ga0265314_10007063 3300031711 Bacteria 9803
149 Ga0307510_10158090 3300033180 Bacteria 1869
150 Ga0373934_0020334 3300035086 Bacteria 2551
151 Ga0373953_0017467 3300035117 Unclassified 2638
152 Ga0373954_0004224 3300035118 Bacteria 6167
153 Ga0373954_0010256 3300035118 Bacteria 4132
154 Ga0373954_0043754 3300035118 Bacteria 2089
155 Ga0373955_0043810 3300035172 Unclassified 2408
156 Ga0373935_0042144 3300035692 Unclassified 2870
157 Ga0373927_0001018 3300035695 Bacteria 21324
158 Ga0373927_0033927 3300035695 Bacteria 3321
159 Ga0373933_0043427 3300035724 Unclassified 2660
160 Ga0373937_0008685 3300036401 Bacteria 8827
161 Ga0373937_0045320 3300036401 Unclassified 4019
162 Ga0373937_0046035 3300036401 Bacteria 3988
163 Ga0373937_0071269 3300036401 Bacteria 3205
164 Ga0373937_0129227 3300036401 Unclassified 2359
165 Ga0373925_0148783 3300037068 Unclassified 1837
166 Ga0436364_0361256 3300037853 Bacteria 5543
167 Ga0436364_0587924 3300037853 Bacteria 4101
168 Ga0436363_1278205 3300039450 Bacteria 2095
169 Ga0436362_0174343 3300039453 Unclassified 2015
170 Ga0466966_0083497 3300044684 Bacteria 1987
171 Ga0466961_0037645 3300044693 Bacteria 3104
172 Ga0495592_0033564 3300046454 Unclassified 3870
173 Ga0495603_0011867 3300046455 Bacteria 5273
174 Ga0495603_0093042 3300046455 Bacteria 1762
175 Ga0495629_0007858 3300046459 Bacteria 7849
176 Ga0495629_0081748 3300046459 Bacteria 2255
177 Ga0495650_0000071 3300046471 Bacteria 258374
178 Ga0495650_0001419 3300046471 Bacteria 23297
179 Ga0495580_0001580 3300046472 Bacteria 20006
180 Ga0495580_0009112 3300046472 Bacteria 7828
181 Ga0495580_0032944 3300046472 Bacteria 3734
182 Ga0495580_0042169 3300046472 Bacteria 3252
183 Ga0495580_0070982 3300046472 Bacteria 2433
184 Ga0495582_0007978 3300046473 Bacteria 5848
185 Ga0495639_0001562 3300046475 Bacteria 10237
186 Ga0495662_0019615 3300046476 Bacteria 3271
187 Ga0495664_0009978 3300046477 Bacteria 5327
188 Ga0495585_0005535 3300046492 Bacteria 7951
189 Ga0495594_0000071 3300046499 Bacteria 43649
190 Ga0495594_0064506 3300046499 Bacteria 2030
191 Ga0495606_0069768 3300046507 Bacteria 2219
192 Ga0495630_0093413 3300046517 Bacteria 2274
193 Ga0495644_0000591 3300046523 Bacteria 15199
194 Ga0495648_0054136 3300046524 Bacteria 2426
195 Ga0495666_0000546 3300046526 Bacteria 16761
196 Ga0495642_0050877 3300046528 Bacteria 1704
197 Ga0495652_0019006 3300046529 Bacteria 6122
198 Ga0495652_0034225 3300046529 Bacteria 4429
199 Ga0495652_0144122 3300046529 Bacteria 1870
200 Ga0495586_0027972 3300046535 Bacteria 3017
201 Ga0495587_0006879 3300046536 Bacteria 7393
202 Ga0495587_0015530 3300046536 Bacteria 4753
203 Ga0495609_0081061 3300046538 Bacteria 1419
204 Ga0495633_0049086 3300046558 Bacteria 1992
205 Ga0495667_0018626 3300046559 Bacteria 4688
206 Ga0495668_0011749 3300046616 Bacteria 5227
207 Ga0495668_0072774 3300046616 Bacteria 1888
208 Ga0495634_0039018 3300046642 Bacteria 3236
209 Ga0495611_0015340 3300046648 Bacteria 3275
210 Ga0495625_0021210 3300046660 Bacteria 5005
211 Ga0495625_0023817 3300046660 Bacteria 4672
212 Ga0495625_0053050 3300046660 Bacteria 2902
213 Ga0495635_0100997 3300046663 Bacteria 1971
214 Ga0495623_0038661 3300046679 Bacteria 3051
215 Ga0495669_0030980 3300046684 Bacteria 2348
216 Ga0495613_0019355 3300046689 Bacteria 5074
217 Ga0495613_0114718 3300046689 Bacteria 1939
218 Ga0495624_0001674 3300046690 Bacteria 16985
219 Ga0495604_0004054 3300047317 Bacteria 11641
220 Ga0495604_0018552 3300047317 Bacteria 5574
221 Ga0495674_0002365 3300047319 Bacteria 18457
222 Ga0495676_0019068 3300047321 Bacteria 6039
223 Ga0495680_0007976 3300047322 Bacteria 9657
224 Ga0495675_0043118 3300047444 Bacteria 2875
225 Ga0495675_0108412 3300047444 Bacteria 1735
226 Ga0495684_0011395 3300047471 Bacteria 6865
227 Ga0495684_0021830 3300047471 Bacteria 4927
228 Ga0495593_0062721 3300047673 Bacteria 1942
229 Ga0495602_0016273 3300048088 Bacteria 7482
230 Ga0495614_0013156 3300048089 Bacteria 3629
231 Ga0496104_0070360 3300048907 Bacteria 3326
232 Ga0496105_0075404 3300048908 Bacteria 2785
233 Ga0496114_0241792 3300048917 Bacteria 1587
234 Ga0496126_0000187 3300048929 Bacteria 139670
235 Ga0501032_0000463 3300049569 Bacteria 32728
236 Ga0501034_0007905 3300049571 Bacteria 11298
237 Ga0501034_0008073 3300049571 Bacteria 11162
238 Ga0501036_0008581 3300049572 Bacteria 8383
239 Ga0501041_0036446 3300049577 Bacteria 2980
240 Ga0501043_0002199 3300049579 Bacteria 16623
241 Ga0501046_0000091 3300049580 Bacteria 98095
242 Ga0501047_0000929 3300049581 Bacteria 29943
243 Ga0501047_0055108 3300049581 Bacteria 3845
244 Ga0501070_0174220 3300049586 Bacteria 1772
245 Ga0501072_0009170 3300049588 Bacteria 7516
246 Ga0501073_0007619 3300049589 Bacteria 8040
247 Ga0501035_0014123 3300049822 Bacteria 7366
248 Ga0501044_0003342 3300049823 Bacteria 18091
249 Ga0501044_0043639 3300049823 Bacteria 4657
250 nmdc:mga0a205_27401_c1 3300050515 Bacteria 5442
251 Ga0495601_0094381 3300053077 Bacteria 1928
252 Ga0500643_011280 3300053087 Bacteria 3268
253 Ga0500651_0000007 3300053093 Bacteria 295019
254 Ga0500595_000023 3300053119 Bacteria 147097

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009176 Ga0105242_10010681 Ga0105242_100106814 376
2 3300046684 Ga0495669_0030980 Ga0495669_0030980_18_1283 408
3 3300044684 Ga0466966_0083497 Ga0466966_0083497_212_1594 410
4 3300044693 Ga0466961_0037645 Ga0466961_0037645_1553_2935 410
5 3300039450 Ga0436363_1278205 Ga0436363_1278205_403_1803 416
6 3300009176 Ga0105242_10152857 Ga0105242_101528572 423
7 3300046459 Ga0495629_0081748 Ga0495629_0081748_40_1335 424
8 3300037853 Ga0436364_0587924 Ga0436364_0587924_921_2348 425
9 3300014325 Ga0163163_10378353 Ga0163163_103783532 432
10 3300053077 Ga0495601_0094381 Ga0495601_0094381_20_1342 432
11 3300009177 Ga0105248_10019570 Ga0105248_100195707 435
12 3300046538 Ga0495609_0081061 Ga0495609_0081061_50_1408 437
13 3300046472 Ga0495580_0070982 Ga0495580_0070982_1055_2416 438
14 3300036401 Ga0373937_0046035 Ga0373937_0046035_1725_3197 440
15 3300046472 Ga0495580_0001580 Ga0495580_0001580_12091_13563 440
16 3300047444 Ga0495675_0108412 Ga0495675_0108412_47_1519 440
17 3300047471 Ga0495684_0011395 Ga0495684_0011395_527_1999 440
18 3300005340 Ga0070689_100040864 Ga0070689_1000408641 441
19 3300005617 Ga0068859_100042759 Ga0068859_1000427594 441
20 3300005843 Ga0068860_100083073 Ga0068860_1000830733 441
21 3300006931 Ga0097620_100042759 Ga0097620_1000427594 441
22 3300025934 Ga0207686_10043880 Ga0207686_100438802 441
23 3300025936 Ga0207670_10072060 Ga0207670_100720602 441
24 3300026089 Ga0207648_10055042 Ga0207648_100550424 441
25 3300028381 Ga0268264_10141370 Ga0268264_101413702 441
26 3300035724 Ga0373933_0043427 Ga0373933_0043427_250_1692 441
27 3300006358 Ga0068871_100040206 Ga0068871_1000402062 443
28 3300009098 Ga0105245_10004261 Ga0105245_100042616 443
29 3300013297 Ga0157378_10007020 Ga0157378_100070206 443
30 3300025927 Ga0207687_10007979 Ga0207687_100079794 443
31 3300046472 Ga0495580_0042169 Ga0495580_0042169_458_1900 445
32 3300049571 Ga0501034_0008073 Ga0501034_0008073_1819_3273 446
33 3300049581 Ga0501047_0055108 Ga0501047_0055108_2002_3456 446
34 3300049823 Ga0501044_0003342 Ga0501044_0003342_4129_5583 446
35 3300009093 Ga0105240_10010677 Ga0105240_1001067710 448
36 3300009545 Ga0105237_10013933 Ga0105237_100139336 448
37 3300025913 Ga0207695_10002790 Ga0207695_1000279021 448
38 3300031711 Ga0265314_10007063 Ga0265314_100070632 452
39 3300005329 Ga0070683_100017820 Ga0070683_1000178207 453
40 3300009093 Ga0105240_10013353 Ga0105240_100133535 453
41 3300025944 Ga0207661_10009512 Ga0207661_100095127 453
42 3300035086 Ga0373934_0020334 Ga0373934_0020334_1002_2399 457
43 3300035118 Ga0373954_0004224 Ga0373954_0004224_3327_4724 457
44 3300036401 Ga0373937_0071269 Ga0373937_0071269_287_1684 457
45 3300046529 Ga0495652_0144122 Ga0495652_0144122_123_1520 457
46 3300047444 Ga0495675_0043118 Ga0495675_0043118_319_1716 457
47 3300035695 Ga0373927_0001018 Ga0373927_0001018_3469_4893 459
48 3300037068 Ga0373925_0148783 Ga0373925_0148783_177_1583 460
49 3300046472 Ga0495580_0009112 Ga0495580_0009112_6180_7586 460
50 3300028800 Ga0265338_10121944 Ga0265338_101219442 463
51 3300007265 Ga0099794_10010282 Ga0099794_100102822 464
52 3300035692 Ga0373935_0042144 Ga0373935_0042144_164_1600 465
53 3300036401 Ga0373937_0008685 Ga0373937_0008685_4589_6025 465
54 3300046471 Ga0495650_0001419 Ga0495650_0001419_253_1776 465
55 3300005329 Ga0070683_100000543 Ga0070683_1000005433 467
56 3300005336 Ga0070680_100030207 Ga0070680_1000302074 467
57 3300005341 Ga0070691_10004727 Ga0070691_100047271 467
58 3300005344 Ga0070661_100105867 Ga0070661_1001058671 467
59 3300005458 Ga0070681_10013005 Ga0070681_100130052 467
60 3300005530 Ga0070679_100006210 Ga0070679_1000062103 467
61 3300005535 Ga0070684_100000266 Ga0070684_10000026619 467
62 3300005539 Ga0068853_100009137 Ga0068853_1000091373 467
63 3300005563 Ga0068855_100002810 Ga0068855_10000281018 467
64 3300005563 Ga0068855_100039647 Ga0068855_1000396472 467
65 3300005577 Ga0068857_100003275 Ga0068857_1000032758 467
66 3300005614 Ga0068856_100018400 Ga0068856_1000184005 467
67 3300005614 Ga0068856_100070735 Ga0068856_1000707352 467
68 3300005842 Ga0068858_100071858 Ga0068858_1000718583 467
69 3300009093 Ga0105240_10003354 Ga0105240_1000335418 467
70 3300009093 Ga0105240_10045822 Ga0105240_100458222 467
71 3300009098 Ga0105245_10221555 Ga0105245_102215552 467
72 3300009174 Ga0105241_10002056 Ga0105241_100020562 467
73 3300009177 Ga0105248_10014866 Ga0105248_100148664 467
74 3300009545 Ga0105237_10001784 Ga0105237_100017846 467
75 3300009551 Ga0105238_10001038 Ga0105238_100010382 467
76 3300009551 Ga0105238_10152806 Ga0105238_101528062 467
77 3300009553 Ga0105249_10004444 Ga0105249_100044445 467
78 3300010375 Ga0105239_10013356 Ga0105239_100133563 467
79 3300011119 Ga0105246_10004532 Ga0105246_100045324 467
80 3300013104 Ga0157370_10001347 Ga0157370_1000134711 467
81 3300013104 Ga0157370_10010328 Ga0157370_100103282 467
82 3300013105 Ga0157369_10000948 Ga0157369_100009488 467
83 3300013105 Ga0157369_10003125 Ga0157369_1000312517 467
84 3300013307 Ga0157372_10001815 Ga0157372_100018155 467
85 3300025911 Ga0207654_10002874 Ga0207654_100028745 467
86 3300025912 Ga0207707_10001833 Ga0207707_1000183318 467
87 3300025913 Ga0207695_10000509 Ga0207695_1000050947 467
88 3300025913 Ga0207695_10004088 Ga0207695_100040885 467
89 3300025917 Ga0207660_10006326 Ga0207660_100063265 467
90 3300025921 Ga0207652_10000647 Ga0207652_1000064713 467
91 3300025924 Ga0207694_10000510 Ga0207694_1000051025 467
92 3300025927 Ga0207687_10003158 Ga0207687_100031583 467
93 3300025941 Ga0207711_10002641 Ga0207711_100026417 467
94 3300025944 Ga0207661_10001124 Ga0207661_100011245 467
95 3300025949 Ga0207667_10001646 Ga0207667_1000164627 467
96 3300026035 Ga0207703_10064167 Ga0207703_100641672 467
97 3300026041 Ga0207639_10051096 Ga0207639_100510963 467
98 3300026078 Ga0207702_10005800 Ga0207702_100058006 467
99 3300026116 Ga0207674_10007092 Ga0207674_100070928 467
100 3300035117 Ga0373953_0017467 Ga0373953_0017467_748_2187 467
101 3300035118 Ga0373954_0010256 Ga0373954_0010256_1191_2630 467
102 3300035172 Ga0373955_0043810 Ga0373955_0043810_743_2182 467
103 3300036401 Ga0373937_0045320 Ga0373937_0045320_1891_3330 467
104 3300046689 Ga0495613_0114718 Ga0495613_0114718_12_1499 467
105 3300047471 Ga0495684_0021830 Ga0495684_0021830_2360_3799 467
106 3300005329 Ga0070683_100023221 Ga0070683_1000232212 468
107 3300005535 Ga0070684_100012362 Ga0070684_1000123624 468
108 3300005535 Ga0070684_100031798 Ga0070684_1000317982 468
109 3300009093 Ga0105240_10227325 Ga0105240_102273251 468
110 3300009098 Ga0105245_10021264 Ga0105245_100212643 468
111 3300009545 Ga0105237_10093041 Ga0105237_100930411 468
112 3300013105 Ga0157369_10033956 Ga0157369_100339564 468
113 3300014325 Ga0163163_10069604 Ga0163163_100696043 468
114 3300014325 Ga0163163_10114382 Ga0163163_101143824 468
115 3300025927 Ga0207687_10006057 Ga0207687_100060574 468
116 3300025944 Ga0207661_10024890 Ga0207661_100248901 468
117 3300026041 Ga0207639_10079957 Ga0207639_100799573 468
118 3300031595 Ga0265313_10006536 Ga0265313_100065364 468
119 3300035118 Ga0373954_0043754 Ga0373954_0043754_301_1743 468
120 3300035695 Ga0373927_0033927 Ga0373927_0033927_300_1745 468
121 3300036401 Ga0373937_0129227 Ga0373937_0129227_279_1721 468
122 3300046454 Ga0495592_0033564 Ga0495592_0033564_787_2229 468
123 3300046535 Ga0495586_0027972 Ga0495586_0027972_990_2432 468
124 3300046536 Ga0495587_0006879 Ga0495587_0006879_748_2190 468
125 3300046536 Ga0495587_0015530 Ga0495587_0015530_2263_3705 468
126 3300048088 Ga0495602_0016273 Ga0495602_0016273_5459_6901 468
127 3300005329 Ga0070683_100067060 Ga0070683_1000670602 470
128 3300005330 Ga0070690_100032405 Ga0070690_1000324052 470
129 3300005435 Ga0070714_100000350 Ga0070714_10000035012 470
130 3300005436 Ga0070713_100005522 Ga0070713_1000055226 470
131 3300005456 Ga0070678_100004212 Ga0070678_1000042123 470
132 3300005457 Ga0070662_100126201 Ga0070662_1001262011 470
133 3300005458 Ga0070681_10225862 Ga0070681_102258622 470
134 3300005563 Ga0068855_100055572 Ga0068855_1000555725 470
135 3300005563 Ga0068855_100258669 Ga0068855_1002586691 470
136 3300005577 Ga0068857_100002114 Ga0068857_10000211413 470
137 3300005614 Ga0068856_100095369 Ga0068856_1000953692 470
138 3300005614 Ga0068856_100290057 Ga0068856_1002900572 470
139 3300005843 Ga0068860_100008862 Ga0068860_1000088623 470
140 3300006028 Ga0070717_10143365 Ga0070717_101433652 470
141 3300006358 Ga0068871_100021968 Ga0068871_1000219684 470
142 3300009093 Ga0105240_10088867 Ga0105240_100888674 470
143 3300009093 Ga0105240_10180851 Ga0105240_101808512 470
144 3300009174 Ga0105241_10004622 Ga0105241_100046224 470
145 3300009174 Ga0105241_10053614 Ga0105241_100536142 470
146 3300009176 Ga0105242_10013236 Ga0105242_100132365 470
147 3300009176 Ga0105242_10118390 Ga0105242_101183901 470
148 3300009551 Ga0105238_10022175 Ga0105238_100221754 470
149 3300013296 Ga0157374_10041227 Ga0157374_100412274 470
150 3300013306 Ga0163162_10051014 Ga0163162_100510142 470
151 3300014326 Ga0157380_10164960 Ga0157380_101649602 470
152 3300025924 Ga0207694_10004788 Ga0207694_100047885 470
153 3300025933 Ga0207706_10144656 Ga0207706_101446562 470
154 3300025934 Ga0207686_10116038 Ga0207686_101160382 470
155 3300025941 Ga0207711_10025892 Ga0207711_100258922 470
156 3300025942 Ga0207689_10026853 Ga0207689_100268534 470
157 3300025949 Ga0207667_10026730 Ga0207667_100267304 470
158 3300026116 Ga0207674_10005378 Ga0207674_1000537813 470
159 3300028381 Ga0268264_10174667 Ga0268264_101746672 470
160 3300039453 Ga0436362_0174343 Ga0436362_0174343_212_1663 470
161 3300005548 Ga0070665_100030511 Ga0070665_1000305112 472
162 3300005548 Ga0070665_100097623 Ga0070665_1000976232 472
163 3300028379 Ga0268266_10001740 Ga0268266_1000174020 472
164 3300028379 Ga0268266_10006076 Ga0268266_1000607610 472
165 3300005344 Ga0070661_100074973 Ga0070661_1000749731 473
166 3300005355 Ga0070671_100005785 Ga0070671_1000057853 473
167 3300005548 Ga0070665_100005372 Ga0070665_1000053726 473
168 3300009177 Ga0105248_10246756 Ga0105248_102467562 473
169 3300009545 Ga0105237_10059577 Ga0105237_100595772 473
170 3300013296 Ga0157374_10003508 Ga0157374_100035084 473
171 3300014325 Ga0163163_10005034 Ga0163163_100050346 473
172 3300014968 Ga0157379_10006558 Ga0157379_100065583 473
173 3300014969 Ga0157376_10135000 Ga0157376_101350002 473
174 3300025914 Ga0207671_10068917 Ga0207671_100689171 473
175 3300026095 Ga0207676_10030167 Ga0207676_100301673 473
176 3300046455 Ga0495603_0093042 Ga0495603_0093042_179_1669 473
177 3300046459 Ga0495629_0007858 Ga0495629_0007858_87_1577 473
178 3300046472 Ga0495580_0032944 Ga0495580_0032944_166_1656 473
179 3300046473 Ga0495582_0007978 Ga0495582_0007978_217_1707 473
180 3300046475 Ga0495639_0001562 Ga0495639_0001562_793_2283 473
181 3300046476 Ga0495662_0019615 Ga0495662_0019615_1739_3229 473
182 3300046477 Ga0495664_0009978 Ga0495664_0009978_3620_5110 473
183 3300046499 Ga0495594_0064506 Ga0495594_0064506_164_1654 473
184 3300046526 Ga0495666_0000546 Ga0495666_0000546_15225_16715 473
185 3300046528 Ga0495642_0050877 Ga0495642_0050877_151_1641 473
186 3300046529 Ga0495652_0019006 Ga0495652_0019006_3308_4798 473
187 3300046529 Ga0495652_0034225 Ga0495652_0034225_972_2462 473
188 3300046559 Ga0495667_0018626 Ga0495667_0018626_2984_4474 473
189 3300046616 Ga0495668_0072774 Ga0495668_0072774_250_1740 473
190 3300046663 Ga0495635_0100997 Ga0495635_0100997_233_1723 473
191 3300046679 Ga0495623_0038661 Ga0495623_0038661_469_1959 473
192 3300046689 Ga0495613_0019355 Ga0495613_0019355_1310_2800 473
193 3300046690 Ga0495624_0001674 Ga0495624_0001674_12458_13948 473
194 3300047317 Ga0495604_0004054 Ga0495604_0004054_710_2200 473
195 3300047317 Ga0495604_0018552 Ga0495604_0018552_973_2463 473
196 3300047319 Ga0495674_0002365 Ga0495674_0002365_3303_4793 473
197 3300047321 Ga0495676_0019068 Ga0495676_0019068_2649_4139 473
198 3300047322 Ga0495680_0007976 Ga0495680_0007976_4395_5885 473
199 3300047673 Ga0495593_0062721 Ga0495593_0062721_38_1528 473
200 3300048089 Ga0495614_0013156 Ga0495614_0013156_239_1729 473
201 3300048907 Ga0496104_0070360 Ga0496104_0070360_27_1517 473
202 3300048908 Ga0496105_0075404 Ga0496105_0075404_170_1660 473
203 3300048917 Ga0496114_0241792 Ga0496114_0241792_70_1560 473
204 3300049569 Ga0501032_0000463 Ga0501032_0000463_17615_19105 473
205 3300049571 Ga0501034_0007905 Ga0501034_0007905_5652_7142 473
206 3300049572 Ga0501036_0008581 Ga0501036_0008581_2575_4065 473
207 3300049579 Ga0501043_0002199 Ga0501043_0002199_14696_16186 473
208 3300049580 Ga0501046_0000091 Ga0501046_0000091_80770_82260 473
209 3300049581 Ga0501047_0000929 Ga0501047_0000929_14980_16470 473
210 3300049589 Ga0501073_0007619 Ga0501073_0007619_113_1603 473
211 3300049822 Ga0501035_0014123 Ga0501035_0014123_4613_6103 473
212 3300049823 Ga0501044_0043639 Ga0501044_0043639_2032_3522 473
213 iso_pu_bacteria 2884215851 2884219327 473
214 3300025913 Ga0207695_10015145 Ga0207695_100151453 474
215 3300046455 Ga0495603_0011867 Ga0495603_0011867_1349_2842 474
216 3300046492 Ga0495585_0005535 Ga0495585_0005535_6212_7705 474
217 3300046499 Ga0495594_0000071 Ga0495594_0000071_30988_32481 474
218 3300046523 Ga0495644_0000591 Ga0495644_0000591_10962_12455 474
219 3300046558 Ga0495633_0049086 Ga0495633_0049086_487_1980 474
220 3300046616 Ga0495668_0011749 Ga0495668_0011749_2159_3652 474
221 3300046648 Ga0495611_0015340 Ga0495611_0015340_337_1830 474
222 3300009177 Ga0105248_10131300 Ga0105248_101313002 475
223 3300009093 Ga0105240_10212966 Ga0105240_102129662 476
224 3300033180 Ga0307510_10158090 Ga0307510_101580902 476
225 3300046471 Ga0495650_0000071 Ga0495650_0000071_127661_129160 476
226 3300046507 Ga0495606_0069768 Ga0495606_0069768_36_1529 476
227 3300046524 Ga0495648_0054136 Ga0495648_0054136_796_2295 476
228 3300046660 Ga0495625_0021210 Ga0495625_0021210_13_1512 476
229 3300046660 Ga0495625_0023817 Ga0495625_0023817_2824_4317 476
230 3300046660 Ga0495625_0053050 Ga0495625_0053050_868_2367 476
231 3300048929 Ga0496126_0000187 Ga0496126_0000187_42169_43671 476
232 3300053087 Ga0500643_011280 Ga0500643_011280_1391_2890 476
233 3300053093 Ga0500651_0000007 Ga0500651_0000007_257375_258874 476
234 3300053119 Ga0500595_000023 Ga0500595_000023_108179_109732 476
235 3300005327 Ga0070658_10069060 Ga0070658_100690602 477
236 3300005331 Ga0070670_100096443 Ga0070670_1000964433 477
237 3300005356 Ga0070674_100000323 Ga0070674_10000032315 477
238 3300005356 Ga0070674_100007518 Ga0070674_1000075185 477
239 3300005471 Ga0070698_100022301 Ga0070698_1000223012 477
240 3300005563 Ga0068855_100116158 Ga0068855_1001161582 477
241 3300005617 Ga0068859_100238595 Ga0068859_1002385951 477
242 3300006173 Ga0070716_100000269 Ga0070716_1000002692 477
243 3300006914 Ga0075436_100030200 Ga0075436_1000302002 477
244 3300009177 Ga0105248_10022757 Ga0105248_100227577 477
245 3300009551 Ga0105238_10167001 Ga0105238_101670012 477
246 3300025917 Ga0207660_10022906 Ga0207660_100229063 477
247 3300025932 Ga0207690_10063143 Ga0207690_100631432 477
248 3300025939 Ga0207665_10000015 Ga0207665_1000001566 477
249 3300037853 Ga0436364_0361256 Ga0436364_0361256_3355_4836 477
250 3300046517 Ga0495630_0093413 Ga0495630_0093413_651_2105 477
251 3300046642 Ga0495634_0039018 Ga0495634_0039018_1463_2917 477
252 3300049577 Ga0501041_0036446 Ga0501041_0036446_945_2399 477
253 3300049586 Ga0501070_0174220 Ga0501070_0174220_198_1694 477
254 3300049588 Ga0501072_0009170 Ga0501072_0009170_2296_3750 477
255 3300050515 nmdc:mga0a205_27401_c1 nmdc:mga0a205_27401_c1_1185_2717 477

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00206

Lyase_1

Lyase

45

319

0.86

PF14698

ASL_C2

Argininosuccinate lyase C-terminal

384

458

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1i0a-assembly1.cif.gz_C crystal structure of wild type turkey delta 1 crystallin (eye lens protein) 0.8981 14 449
1k7w-assembly1.cif.gz_C crystal structure of s283a duck delta 2 crystallin mutant 0.898 3 452
1xwo-assembly1.cif.gz_D crystal structrue of goose delta crystallin 0.8945 3 454
6ien-assembly1.cif.gz_C substrate/product bound argininosuccinate lyase from mycobacterium tuberculosis 0.8924 3 457
1k7w-assembly1.cif.gz_C crystal structure of s283a duck delta 2 crystallin mutant 0.8923 3 452
ID Description Score Start End Superfamily
af_Q58201_108_416_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9186 101 401 1.20.200.10
6iemG02 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9009 115 452 1.20.200.10
af_Q2FZU2_109_364_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.8981 101 349 1.20.200.10
6iemA01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.8974 23 216 1.10.275.10
af_I1JV68_161_409_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.8973 101 342 1.20.200.10
ID Description Score Start End GO Terms
AF-A0A1F2STH5-F1-model_v4 Argininosuccinate lyase (EC 4.3.2.1) 0.9896 1 477 GO:0004056
GO:0005829
GO:0006526
GO:0042450
AF-A0A1F2STH5-F1-model_v4 Argininosuccinate lyase (EC 4.3.2.1) 0.9876 1 477 GO:0004056
GO:0005829
GO:0006526
GO:0042450
AF-A0A2V8DZS3-F1-model_v4 Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase) 0.987 1 459 GO:0004056
GO:0005829
GO:0006526
GO:0042450
AF-A0A7V8WJ40-F1-model_v4 argininosuccinate lyase (EC 4.3.2.1) 0.9855 138 476 GO:0004056
GO:0005829
GO:0006526
GO:0042450
AF-A0A357EZW2-F1-model_v4 argininosuccinate lyase (EC 4.3.2.1) 0.9729 4 250 GO:0004056
GO:0005829
GO:0006526
GO:0042450

Feature Viewer

pLDDT pTM Quality
93.45 0.91 High
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Predicted Structure (AlphaFold2)

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