F365250

General Info

Members Datasets Scaffolds Average Seq Length
254 144 508 407

Family's Representative Sequence

Representative Sequence 3300050512|nmdc:mga0n895_206127_c1|nmdc:mga0n895_206127_c1_153_1511
Length 452
Sequence VDHALISPPERASSAWDDVIEPPGHDDSLVAAASVEHERSKPLNTVTDTVLGTHSEVGKLHTVMVHRPDLAHERLSPTNAHELLFDDVIWVRRARQEHDAFVDLMRERGTEVLLLHELLAETLEDAEARQWLLSRRVRPEEVTVMFTEPLKDWLTEMPAEELATRLTGGITVLELPGEIKSAIGPALGPTDFVLPPLPNQLFTRDTSAWLYGGVSLNPMFWPARQLETLNVEAIYRFHPRFRDAGFQIWFGGADHDWGTARMEGGDMMPVGDGVVLIGMGERSTAKAVSILARTMFEAGAARLVLGAQMPRDRAAMHLDTVFTFCNHDIATLYEPVVDQIRPILFTPGGPAGVQAEVSERAFLDEVKDALGLERLKLVPTAGDEFEAERTQWDDGNNVVALEPGVVVAYERNEATNAKLSKAGIEVLAIAGQELGRGRGGGHCMTCPIVREA

Samples

Sample ID Description Type Environment
1 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
2 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
16 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
34 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
48 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
51 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
52 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
53 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
60 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
61 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
62 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
71 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
72 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
73 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
74 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
75 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
78 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
79 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
80 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
81 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
82 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
83 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
84 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
85 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
86 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
87 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
90 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
91 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
92 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
93 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
94 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
100 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
104 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.57
Nodule 0
Rhizoplane 21.65
Rhizosphere 75.59
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0n895_206127_c1 3300050512 Bacteria 1997
2 Ga0055531_10009814 3300003794 Bacteria 4851
3 Ga0070683_100007615 3300005329 Bacteria 9159
4 Ga0070683_100010374 3300005329 Bacteria 8012
5 Ga0070680_100008816 3300005336 Bacteria 7738
6 Ga0070674_100099565 3300005356 Bacteria 2115
7 Ga0070674_100244456 3300005356 Bacteria 1407
8 Ga0070713_100063702 3300005436 Bacteria 3093
9 Ga0070678_100004673 3300005456 Bacteria 7792
10 Ga0070678_100008519 3300005456 Bacteria 6144
11 Ga0070681_10001982 3300005458 Bacteria 18507
12 Ga0070698_100004222 3300005471 Bacteria 15793
13 Ga0070679_100014285 3300005530 Bacteria 7626
14 Ga0070684_100005549 3300005535 Bacteria 9682
15 Ga0070684_100017698 3300005535 Bacteria 5857
16 Ga0070684_100029500 3300005535 Bacteria 4650
17 Ga0070684_100269055 3300005535 Bacteria 1560
18 Ga0070704_100237511 3300005549 Bacteria 1490
19 Ga0070664_100036618 3300005564 Bacteria 4123
20 Ga0068856_100057611 3300005614 Bacteria 3836
21 Ga0068856_100116485 3300005614 Bacteria 2672
22 Ga0070702_100026196 3300005615 Bacteria 3131
23 Ga0068866_10047537 3300005718 Bacteria 2164
24 Ga0068860_100131275 3300005843 Bacteria 2404
25 Ga0070716_100062633 3300006173 Bacteria 2157
26 Ga0097621_100151180 3300006237 Bacteria 1991
27 Ga0075433_10275608 3300006852 Bacteria 1491
28 Ga0075434_100011604 3300006871 Bacteria 8319
29 Ga0075436_100194664 3300006914 Bacteria 1435
30 Ga0111539_10015085 3300009094 Bacteria 9630
31 Ga0105245_10020308 3300009098 Bacteria 5824
32 Ga0114129_10017381 3300009147 Bacteria 10242
33 Ga0114129_10713168 3300009147 Bacteria 1288
34 Ga0105243_10026610 3300009148 Bacteria 4429
35 Ga0105243_10186287 3300009148 Bacteria 1809
36 Ga0105248_10054396 3300009177 Bacteria 4489
37 Ga0105248_10071112 3300009177 Bacteria 3908
38 Ga0157374_10117250 3300013296 Bacteria 2566
39 Ga0157378_10034603 3300013297 Bacteria 4467
40 Ga0157372_10080305 3300013307 Bacteria 3689
41 Ga0157375_10044296 3300013308 Bacteria 4322
42 Ga0157375_10151892 3300013308 Bacteria 2452
43 Ga0157376_10095190 3300014969 Bacteria 2589
44 Ga0209758_1011934 3300025297 Bacteria 4944
45 Ga0209257_1000303 3300025304 Bacteria 107862
46 Ga0207642_10005991 3300025899 Bacteria 4013
47 Ga0207707_10006727 3300025912 Bacteria 10037
48 Ga0207652_10255400 3300025921 Bacteria 1581
49 Ga0207687_10013450 3300025927 Bacteria 5343
50 Ga0207687_10035162 3300025927 Bacteria 3407
51 Ga0207644_10076866 3300025931 Bacteria 2457
52 Ga0207709_10046415 3300025935 Bacteria 2636
53 Ga0207704_10097074 3300025938 Bacteria 1953
54 Ga0207704_10125597 3300025938 Bacteria 1766
55 Ga0207661_10000856 3300025944 Bacteria 19971
56 Ga0207661_10014416 3300025944 Bacteria 5794
57 Ga0207679_10030837 3300025945 Bacteria 3748
58 Ga0207702_10043420 3300026078 Bacteria 3774
59 Ga0207702_10066881 3300026078 Bacteria 3082
60 Ga0207702_10111778 3300026078 Bacteria 2430
61 Ga0207674_10010863 3300026116 Bacteria 10261
62 Ga0207683_10000142 3300026121 Bacteria 59460
63 Ga0207683_10004299 3300026121 Bacteria 12302
64 Ga0207683_10316429 3300026121 Bacteria 1429
65 Ga0265334_10061752 3300028573 Bacteria 1411
66 Ga0265318_10021901 3300028577 Bacteria 2561
67 Ga0265338_10034157 3300028800 Bacteria 4920
68 Ga0265330_10009700 3300031235 Bacteria 4564
69 Ga0265331_10001962 3300031250 Bacteria 14377
70 Ga0265313_10000021 3300031595 Bacteria 144949
71 Ga0265313_10004543 3300031595 Bacteria 10583
72 Ga0307508_10070995 3300031616 Bacteria 3056
73 Ga0265314_10005751 3300031711 Bacteria 11124
74 Ga0265314_10135635 3300031711 Bacteria 1528
75 Ga0265342_10012521 3300031712 Bacteria 5741
76 Ga0265342_10127262 3300031712 Bacteria 1429
77 Ga0316576_10009397 3300031727 Bacteria 6305
78 Ga0307416_100118683 3300032002 Bacteria 2351
79 Ga0307415_100010323 3300032126 Bacteria 5284
80 Ga0373926_0009016 3300035083 Bacteria 3327
81 Ga0373936_0002695 3300035113 Bacteria 6633
82 Ga0373945_0017213 3300035116 Bacteria 2446
83 Ga0373943_0005133 3300035170 Bacteria 5893
84 Ga0373935_0015955 3300035692 Bacteria 4546
85 Ga0373947_0000346 3300035725 Bacteria 26182
86 Ga0395899_0008795 3300037312 Bacteria 7769
87 Ga0395899_0025866 3300037312 Bacteria 4430
88 Ga0395899_0065146 3300037312 Bacteria 2678
89 Ga0395900_0030225 3300037418 Bacteria 5561
90 Ga0395900_0031016 3300037418 Bacteria 5491
91 Ga0395900_0042531 3300037418 Bacteria 4682
92 Ga0395900_0154067 3300037418 Bacteria 2348
93 Ga0395900_0218061 3300037418 Bacteria 1924
94 Ga0395898_0011221 3300037466 Bacteria 9327
95 Ga0395898_0016306 3300037466 Bacteria 7604
96 Ga0395898_0022828 3300037466 Bacteria 6329
97 Ga0395898_0039387 3300037466 Bacteria 4678
98 Ga0395898_0045498 3300037466 Bacteria 4314
99 Ga0395898_0076613 3300037466 Bacteria 3229
100 Ga0395898_0105121 3300037466 Bacteria 2707
101 Ga0395898_0232832 3300037466 Bacteria 1757
102 Ga0395905_0001778 3300037471 Bacteria 25004
103 Ga0395905_0012505 3300037471 Bacteria 8170
104 Ga0395905_0029858 3300037471 Bacteria 5138
105 Ga0395905_0031282 3300037471 Bacteria 5011
106 Ga0395905_0055996 3300037471 Bacteria 3690
107 Ga0395905_0071871 3300037471 Bacteria 3243
108 Ga0395905_0076969 3300037471 Bacteria 3126
109 Ga0395905_0357607 3300037471 Bacteria 1353
110 Ga0395901_0034240 3300038443 Bacteria 5245
111 Ga0395901_0042294 3300038443 Bacteria 4723
112 Ga0395901_0097482 3300038443 Bacteria 3082
113 Ga0395901_0194164 3300038443 Bacteria 2129
114 Ga0395901_0201066 3300038443 Bacteria 2088
115 Ga0395901_0257655 3300038443 Bacteria 1816
116 Ga0451793_1904380 3300041452 Bacteria 2438
117 Ga0451800_0949005 3300041459 Bacteria 2573
118 Ga0451849_0416000 3300041505 Bacteria 3270
119 Ga0451853_2141807 3300041512 Bacteria 1531
120 Ga0439451_005493 3300042009 Bacteria 2586
121 Ga0450907_009213 3300042146 Bacteria 1637
122 Ga0451576_0347059 3300045051 Bacteria 1554
123 Ga0495603_0045018 3300046455 Bacteria 2633
124 Ga0495641_0013262 3300046461 Bacteria 4542
125 Ga0495651_0029815 3300046462 Bacteria 4254
126 Ga0495651_0072879 3300046462 Bacteria 2607
127 Ga0495653_0114773 3300046463 Bacteria 1929
128 Ga0495582_0072432 3300046473 Bacteria 1907
129 Ga0495639_0088481 3300046475 Bacteria 1450
130 Ga0495662_0012588 3300046476 Bacteria 4126
131 Ga0495585_0140926 3300046492 Bacteria 1263
132 Ga0495607_0041085 3300046501 Bacteria 2749
133 Ga0495608_0020666 3300046511 Bacteria 4522
134 Ga0495628_0050182 3300046516 Bacteria 3301
135 Ga0495630_0006926 3300046517 Bacteria 8078
136 Ga0495630_0007238 3300046517 Bacteria 7917
137 Ga0495630_0012105 3300046517 Bacteria 6255
138 Ga0495652_0024344 3300046529 Bacteria 5360
139 Ga0495652_0052394 3300046529 Bacteria 3481
140 Ga0495652_0066163 3300046529 Bacteria 3034
141 Ga0495665_0045264 3300046531 Bacteria 2338
142 Ga0495640_0017814 3300046533 Bacteria 5283
143 Ga0495640_0082926 3300046533 Bacteria 2128
144 Ga0495667_0038847 3300046559 Bacteria 3168
145 Ga0495667_0059662 3300046559 Bacteria 2503
146 Ga0495656_0094079 3300046615 Bacteria 1375
147 Ga0495656_0097613 3300046615 Bacteria 1354
148 Ga0495635_0010378 3300046663 Bacteria 6514
149 Ga0495657_0065941 3300046675 Bacteria 2380
150 Ga0495657_0079420 3300046675 Bacteria 2125
151 Ga0495658_0001239 3300046683 Bacteria 13404
152 Ga0495613_0024512 3300046689 Bacteria 4495
153 Ga0495600_0012545 3300046809 Bacteria 5302
154 Ga0495600_0034800 3300046809 Bacteria 3271
155 Ga0495581_0035229 3300047315 Bacteria 2896
156 Ga0495674_0003826 3300047319 Bacteria 14612
157 Ga0495674_0058521 3300047319 Bacteria 3368
158 Ga0495676_0033075 3300047321 Bacteria 4359
159 Ga0495680_0001796 3300047322 Bacteria 22697
160 Ga0495680_0023463 3300047322 Bacteria 5130
161 Ga0495677_0070357 3300047445 Bacteria 1304
162 Ga0495684_0006600 3300047471 Bacteria 8999
163 Ga0495684_0015203 3300047471 Bacteria 5928
164 Ga0496100_0030167 3300048903 Bacteria 3361
165 Ga0496100_0033718 3300048903 Bacteria 3206
166 Ga0496100_0046343 3300048903 Bacteria 2795
167 Ga0496100_0046450 3300048903 Bacteria 2792
168 Ga0496100_0079131 3300048903 Bacteria 2214
169 Ga0496101_0001547 3300048904 Bacteria 13788
170 Ga0496101_0023434 3300048904 Bacteria 4265
171 Ga0496101_0043871 3300048904 Bacteria 3197
172 Ga0496102_0001980 3300048905 Bacteria 17696
173 Ga0496102_0041547 3300048905 Bacteria 4164
174 Ga0496102_0043615 3300048905 Bacteria 4068
175 Ga0496103_0009850 3300048906 Bacteria 5658
176 Ga0496103_0071859 3300048906 Bacteria 2166
177 Ga0496103_0075340 3300048906 Bacteria 2116
178 Ga0496104_0001009 3300048907 Bacteria 24141
179 Ga0496104_0001813 3300048907 Bacteria 18528
180 Ga0496104_0031681 3300048907 Bacteria 4918
181 Ga0496104_0294538 3300048907 Bacteria 1535
182 Ga0496104_0334077 3300048907 Bacteria 1428
183 Ga0496105_0022343 3300048908 Bacteria 5123
184 Ga0496105_0052921 3300048908 Bacteria 3353
185 Ga0496105_0079665 3300048908 Bacteria 2705
186 Ga0496106_0037870 3300048909 Bacteria 3608
187 Ga0496106_0065673 3300048909 Bacteria 2762
188 Ga0496106_0066455 3300048909 Bacteria 2746
189 Ga0496106_0102405 3300048909 Bacteria 2221
190 Ga0496106_0181787 3300048909 Bacteria 1669
191 Ga0496107_0004076 3300048910 Bacteria 9839
192 Ga0496107_0031567 3300048910 Bacteria 3781
193 Ga0496107_0058335 3300048910 Bacteria 2791
194 Ga0496108_0003842 3300048911 Bacteria 12050
195 Ga0496108_0004554 3300048911 Bacteria 11169
196 Ga0496108_0064761 3300048911 Bacteria 3080
197 Ga0496109_0001080 3300048912 Bacteria 22643
198 Ga0496109_0002568 3300048912 Bacteria 15206
199 Ga0496109_0029123 3300048912 Bacteria 4943
200 Ga0496109_0096512 3300048912 Bacteria 2739
201 Ga0496109_0114729 3300048912 Bacteria 2506
202 Ga0496110_0000414 3300048913 Bacteria 29042
203 Ga0496110_0206749 3300048913 Bacteria 1784
204 Ga0496110_0293309 3300048913 Bacteria 1481
205 Ga0496111_0001014 3300048914 Bacteria 15411
206 Ga0496111_0001251 3300048914 Bacteria 14216
207 Ga0496111_0053036 3300048914 Bacteria 2929
208 Ga0496111_0073064 3300048914 Bacteria 2497
209 Ga0496112_0163654 3300048915 Bacteria 2191
210 Ga0496113_0087874 3300048916 Bacteria 2391
211 Ga0496114_0001826 3300048917 Bacteria 16140
212 Ga0496114_0026879 3300048917 Bacteria 4714
213 Ga0496114_0061800 3300048917 Bacteria 3134
214 Ga0496114_0125270 3300048917 Bacteria 2214
215 Ga0496115_0083392 3300048918 Bacteria 2605
216 Ga0496115_0103315 3300048918 Bacteria 2338
217 Ga0501031_0056080 3300049568 Bacteria 2567
218 Ga0501037_0095886 3300049573 Bacteria 2144
219 Ga0501038_0280133 3300049574 Bacteria 1313
220 Ga0501040_0040169 3300049576 Bacteria 3183
221 Ga0501040_0149896 3300049576 Bacteria 1645
222 Ga0501041_0008053 3300049577 Bacteria 6201
223 Ga0501041_0048571 3300049577 Bacteria 2585
224 Ga0501042_0021084 3300049578 Bacteria 4538
225 Ga0501042_0212342 3300049578 Bacteria 1396
226 Ga0501047_0064534 3300049581 Bacteria 3532
227 Ga0501071_0010621 3300049587 Bacteria 6176
228 Ga0501072_0006432 3300049588 Bacteria 8950
229 Ga0501072_0154455 3300049588 Bacteria 1830
230 Ga0501075_0041207 3300049591 Bacteria 3460
231 Ga0501076_0088521 3300049592 Bacteria 2488
232 Ga0501076_0260042 3300049592 Bacteria 1421
233 Ga0501079_0160384 3300049741 Bacteria 1753
234 Ga0501079_0229115 3300049741 Bacteria 1451
235 Ga0501080_0247777 3300049742 Bacteria 1625
236 Ga0501080_0248503 3300049742 Bacteria 1622
237 Ga0501081_0025674 3300049743 Bacteria 3966
238 Ga0501081_0090033 3300049743 Bacteria 2156
239 Ga0501081_0095214 3300049743 Bacteria 2099
240 Ga0501035_0067496 3300049822 Bacteria 3173
241 Ga0501045_0018513 3300049824 Bacteria 4955
242 nmdc:mga05p37_337973_c1 3300050507 Bacteria 1776
243 nmdc:mga05p37_34303_c1 3300050507 Bacteria 6215
244 nmdc:mga0n895_13682_c1 3300050512 Bacteria 7336
245 nmdc:mga0n895_22012_c1 3300050512 Bacteria 5972
246 nmdc:mga0n895_60311_c1 3300050512 Bacteria 3744
247 nmdc:mga08x19_61439_c1 3300050514 Bacteria 2435
248 Ga0495601_0051018 3300053077 Bacteria 2611
249 Ga0495595_0001860 3300053084 Bacteria 8191
250 Ga0495595_0034765 3300053084 Bacteria 2281
251 Ga0495619_0005503 3300053085 Bacteria 8033
252 Ga0500642_0001809 3300053130 Bacteria 6172
253 Ga0501084_0069895 3300054114 Bacteria 2940
254 Ga0501082_0178428 3300060353 Bacteria 1847
255 nmdc:mga0n895_206127_c1
256 Ga0055531_10009814
257 Ga0070683_100007615
258 Ga0070683_100010374
259 Ga0070680_100008816
260 Ga0070674_100099565
261 Ga0070674_100244456
262 Ga0070713_100063702
263 Ga0070678_100004673
264 Ga0070678_100008519
265 Ga0070681_10001982
266 Ga0070698_100004222
267 Ga0070679_100014285
268 Ga0070684_100005549
269 Ga0070684_100017698
270 Ga0070684_100029500
271 Ga0070684_100269055
272 Ga0070704_100237511
273 Ga0070664_100036618
274 Ga0068856_100057611
275 Ga0068856_100116485
276 Ga0070702_100026196
277 Ga0068866_10047537
278 Ga0068860_100131275
279 Ga0070716_100062633
280 Ga0097621_100151180
281 Ga0075433_10275608
282 Ga0075434_100011604
283 Ga0075436_100194664
284 Ga0111539_10015085
285 Ga0105245_10020308
286 Ga0114129_10017381
287 Ga0114129_10713168
288 Ga0105243_10026610
289 Ga0105243_10186287
290 Ga0105248_10054396
291 Ga0105248_10071112
292 Ga0157374_10117250
293 Ga0157378_10034603
294 Ga0157372_10080305
295 Ga0157375_10044296
296 Ga0157375_10151892
297 Ga0157376_10095190
298 Ga0209758_1011934
299 Ga0209257_1000303
300 Ga0207642_10005991
301 Ga0207707_10006727
302 Ga0207652_10255400
303 Ga0207687_10013450
304 Ga0207687_10035162
305 Ga0207644_10076866
306 Ga0207709_10046415
307 Ga0207704_10097074
308 Ga0207704_10125597
309 Ga0207661_10000856
310 Ga0207661_10014416
311 Ga0207679_10030837
312 Ga0207702_10043420
313 Ga0207702_10066881
314 Ga0207702_10111778
315 Ga0207674_10010863
316 Ga0207683_10000142
317 Ga0207683_10004299
318 Ga0207683_10316429
319 Ga0265334_10061752
320 Ga0265318_10021901
321 Ga0265338_10034157
322 Ga0265330_10009700
323 Ga0265331_10001962
324 Ga0265313_10000021
325 Ga0265313_10004543
326 Ga0307508_10070995
327 Ga0265314_10005751
328 Ga0265314_10135635
329 Ga0265342_10012521
330 Ga0265342_10127262
331 Ga0316576_10009397
332 Ga0307416_100118683
333 Ga0307415_100010323
334 Ga0373926_0009016
335 Ga0373936_0002695
336 Ga0373945_0017213
337 Ga0373943_0005133
338 Ga0373935_0015955
339 Ga0373947_0000346
340 Ga0395899_0008795
341 Ga0395899_0025866
342 Ga0395899_0065146
343 Ga0395900_0030225
344 Ga0395900_0031016
345 Ga0395900_0042531
346 Ga0395900_0154067
347 Ga0395900_0218061
348 Ga0395898_0011221
349 Ga0395898_0016306
350 Ga0395898_0022828
351 Ga0395898_0039387
352 Ga0395898_0045498
353 Ga0395898_0076613
354 Ga0395898_0105121
355 Ga0395898_0232832
356 Ga0395905_0001778
357 Ga0395905_0012505
358 Ga0395905_0029858
359 Ga0395905_0031282
360 Ga0395905_0055996
361 Ga0395905_0071871
362 Ga0395905_0076969
363 Ga0395905_0357607
364 Ga0395901_0034240
365 Ga0395901_0042294
366 Ga0395901_0097482
367 Ga0395901_0194164
368 Ga0395901_0201066
369 Ga0395901_0257655
370 Ga0451793_1904380
371 Ga0451800_0949005
372 Ga0451849_0416000
373 Ga0451853_2141807
374 Ga0439451_005493
375 Ga0450907_009213
376 Ga0451576_0347059
377 Ga0495603_0045018
378 Ga0495641_0013262
379 Ga0495651_0029815
380 Ga0495651_0072879
381 Ga0495653_0114773
382 Ga0495582_0072432
383 Ga0495639_0088481
384 Ga0495662_0012588
385 Ga0495585_0140926
386 Ga0495607_0041085
387 Ga0495608_0020666
388 Ga0495628_0050182
389 Ga0495630_0006926
390 Ga0495630_0007238
391 Ga0495630_0012105
392 Ga0495652_0024344
393 Ga0495652_0052394
394 Ga0495652_0066163
395 Ga0495665_0045264
396 Ga0495640_0017814
397 Ga0495640_0082926
398 Ga0495667_0038847
399 Ga0495667_0059662
400 Ga0495656_0094079
401 Ga0495656_0097613
402 Ga0495635_0010378
403 Ga0495657_0065941
404 Ga0495657_0079420
405 Ga0495658_0001239
406 Ga0495613_0024512
407 Ga0495600_0012545
408 Ga0495600_0034800
409 Ga0495581_0035229
410 Ga0495674_0003826
411 Ga0495674_0058521
412 Ga0495676_0033075
413 Ga0495680_0001796
414 Ga0495680_0023463
415 Ga0495677_0070357
416 Ga0495684_0006600
417 Ga0495684_0015203
418 Ga0496100_0030167
419 Ga0496100_0033718
420 Ga0496100_0046343
421 Ga0496100_0046450
422 Ga0496100_0079131
423 Ga0496101_0001547
424 Ga0496101_0023434
425 Ga0496101_0043871
426 Ga0496102_0001980
427 Ga0496102_0041547
428 Ga0496102_0043615
429 Ga0496103_0009850
430 Ga0496103_0071859
431 Ga0496103_0075340
432 Ga0496104_0001009
433 Ga0496104_0001813
434 Ga0496104_0031681
435 Ga0496104_0294538
436 Ga0496104_0334077
437 Ga0496105_0022343
438 Ga0496105_0052921
439 Ga0496105_0079665
440 Ga0496106_0037870
441 Ga0496106_0065673
442 Ga0496106_0066455
443 Ga0496106_0102405
444 Ga0496106_0181787
445 Ga0496107_0004076
446 Ga0496107_0031567
447 Ga0496107_0058335
448 Ga0496108_0003842
449 Ga0496108_0004554
450 Ga0496108_0064761
451 Ga0496109_0001080
452 Ga0496109_0002568
453 Ga0496109_0029123
454 Ga0496109_0096512
455 Ga0496109_0114729
456 Ga0496110_0000414
457 Ga0496110_0206749
458 Ga0496110_0293309
459 Ga0496111_0001014
460 Ga0496111_0001251
461 Ga0496111_0053036
462 Ga0496111_0073064
463 Ga0496112_0163654
464 Ga0496113_0087874
465 Ga0496114_0001826
466 Ga0496114_0026879
467 Ga0496114_0061800
468 Ga0496114_0125270
469 Ga0496115_0083392
470 Ga0496115_0103315
471 Ga0501031_0056080
472 Ga0501037_0095886
473 Ga0501038_0280133
474 Ga0501040_0040169
475 Ga0501040_0149896
476 Ga0501041_0008053
477 Ga0501041_0048571
478 Ga0501042_0021084
479 Ga0501042_0212342
480 Ga0501047_0064534
481 Ga0501071_0010621
482 Ga0501072_0006432
483 Ga0501072_0154455
484 Ga0501075_0041207
485 Ga0501076_0088521
486 Ga0501076_0260042
487 Ga0501079_0160384
488 Ga0501079_0229115
489 Ga0501080_0247777
490 Ga0501080_0248503
491 Ga0501081_0025674
492 Ga0501081_0090033
493 Ga0501081_0095214
494 Ga0501035_0067496
495 Ga0501045_0018513
496 nmdc:mga05p37_337973_c1
497 nmdc:mga05p37_34303_c1
498 nmdc:mga0n895_13682_c1
499 nmdc:mga0n895_22012_c1
500 nmdc:mga0n895_60311_c1
501 nmdc:mga08x19_61439_c1
502 Ga0495601_0051018
503 Ga0495595_0001860
504 Ga0495595_0034765
505 Ga0495619_0005503
506 Ga0500642_0001809
507 Ga0501084_0069895
508 Ga0501082_0178428

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02274

ADI

Arginine deiminase

81

450

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1rxx-assembly1.cif.gz_B structure of arginine deiminase 0.9335 9 413
2aci-assembly2.cif.gz_D structure of d166a arginine deiminase 0.9287 9 413
1rxx-assembly2.cif.gz_C structure of arginine deiminase 0.9286 9 413
1rxx-assembly2.cif.gz_D structure of arginine deiminase 0.9273 9 413
2aci-assembly2.cif.gz_A structure of d166a arginine deiminase 0.925 9 413
ID Description Score Start End Superfamily
2aafB01 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9336 9 413 3.75.10.10
2aafB01 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9224 9 413 3.75.10.10
1rxxB02 Mainly Alpha;Orthogonal Bundle;Pentein;Arginine deiminase 0.9183 76 137 1.10.3930.10
4bofA01 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9075 10 411 3.75.10.10
4bofA01 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9021 10 411 3.75.10.10
ID Description Score Start End GO Terms
AF-A0A359EZV5-F1-model_v4 Arginine deiminase (EC 3.5.3.6) 0.9524 275 336 GO:0016990
AF-W4TEK2-F1-model_v4 deleted 0.9522 178 277
AF-A0A7Y9WHT3-F1-model_v4 Arginine deiminase (ADI) (EC 3.5.3.6) (Arginine dihydrolase) (AD) 0.9521 9 413 GO:0005737
GO:0016990
GO:0019546
GO:0019547
AF-A0A512HME4-F1-model_v4 arginine deiminase (EC 3.5.3.6) 0.9517 60 413 GO:0005737
GO:0016990
GO:0019546
AF-C4LA78-F1-model_v4 Arginine deiminase (ADI) (EC 3.5.3.6) (Arginine dihydrolase) (AD) 0.9515 9 413 GO:0005737
GO:0016990
GO:0019546
GO:0019547

Map