F364640

General Info

Members Datasets Scaffolds Average Seq Length
254 191 241 442

Family's Representative Sequence

Representative Sequence 3300005344|Ga0070661_100041073|Ga0070661_1000410732
Length 458
Sequence LIQIWERLSLRARLLLPLGLIFAVALMAGGIALQAFAPAQLTEETEPAARSARAVAAALNAALLTSIDPQATLQAFAQSLGTSEAIRYRPLGTDLNVYPTDVQTPLGAVPRWFVRLFDLPEIKGAFPVMIAGKQVGDILFAPDISADIFEKWIGFLAIACSGIALMLLTGAIAHFNVRSVLGPLQNLGDGLARMRSGDYVQPIALAGPPEIRRSAKEANELASTLIGLSQDNRRLLRQIVSLQDDERQDMARELHDELGPLLFGIRANTVALLESIPSGQAKSRDAADGILQSVETLQQANRRILDRLRPLYIEELGLERSIQTLLQNAKAQAPNLEVTSRIDADLNGVDGLLLLTIYRVIQEAVTNVLRHAGAKSMHVAAAIDHREITVEILDDGTGFPVDPMFGRGLTGMLERARALSGTLELLREEGRTCVRCRLPATDSALRARSAEQDGDQSA

Samples

Sample ID Description Type Environment
1 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
2 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
3 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
4 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
5 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
6 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
7 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
8 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
9 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
10 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
44 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
110 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
112 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
113 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
114 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
118 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
124 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
127 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
132 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
133 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
134 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
135 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
136 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
137 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
138 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
139 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
140 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
141 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
142 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
143 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
144 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
148 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
149 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
150 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
151 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
152 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
153 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
154 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
155 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
158 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
159 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
160 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
161 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
162 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
163 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
164 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
173 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
174 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
175 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
179 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
180 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
181 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
182 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
186 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
187 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
188 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
189 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
190 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
191 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.88
Metatranscriptomes 0
Isolates 5.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.06
Nodule 3.94
Rhizoplane 2.36
Rhizosphere 78.74
Stem 0
Stem Tuber 0
Unclassified 5.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000021 3300003203 Bacteria 84514
2 rootL2_10094270 3300003322 Bacteria 2346
3 JGI25404J52841_10000011 3300003659 Bacteria 15083
4 JGI25404J52841_10005431 3300003659 Bacteria 2634
5 Ga0068869_100030289 3300005334 Bacteria 3797
6 Ga0070680_100014356 3300005336 Bacteria 6188
7 Ga0070682_100015296 3300005337 Bacteria 4444
8 Ga0070661_100041073 3300005344 Bacteria 3375
9 Ga0070668_100028257 3300005347 Bacteria 4259
10 Ga0070668_100033062 3300005347 Bacteria 3936
11 Ga0070668_100096945 3300005347 Bacteria 2331
12 Ga0070668_100169684 3300005347 Bacteria 1776
13 Ga0070675_100255630 3300005354 Bacteria 1534
14 Ga0070674_100006149 3300005356 Bacteria 6979
15 Ga0070674_100132564 3300005356 Bacteria 1860
16 Ga0070659_100110046 3300005366 Bacteria 2224
17 Ga0070701_10047762 3300005438 Bacteria 2206
18 Ga0070663_100007109 3300005455 Bacteria 6790
19 Ga0070678_100036480 3300005456 Bacteria 3442
20 Ga0070662_100014093 3300005457 Bacteria 5332
21 Ga0070662_100021925 3300005457 Bacteria 4365
22 Ga0070681_10009008 3300005458 Bacteria 9810
23 Ga0070681_10166942 3300005458 Bacteria 2124
24 Ga0068867_100024071 3300005459 Bacteria 4363
25 Ga0070698_100210609 3300005471 Bacteria 1878
26 Ga0068853_100085074 3300005539 Bacteria 2772
27 Ga0070672_100022884 3300005543 Bacteria 4598
28 Ga0070695_100029603 3300005545 Bacteria 3402
29 Ga0070665_100075942 3300005548 Bacteria 3367
30 Ga0068855_100117740 3300005563 Bacteria 3043
31 Ga0068855_100195179 3300005563 Bacteria 2281
32 Ga0068857_100089291 3300005577 Bacteria 2757
33 Ga0068864_100154058 3300005618 Bacteria 2084
34 Ga0068861_100215618 3300005719 Bacteria 1619
35 Ga0068870_10033981 3300005840 Bacteria 2607
36 Ga0068858_100076142 3300005842 Bacteria 3116
37 Ga0068860_100059164 3300005843 Bacteria 3643
38 Ga0068860_100077526 3300005843 Bacteria 3160
39 Ga0081455_10001156 3300005937 Bacteria 33081
40 Ga0081455_10022999 3300005937 Bacteria 5811
41 Ga0081455_10085959 3300005937 Bacteria 2563
42 Ga0081540_1000460 3300005983 Bacteria 40362
43 Ga0081540_1002719 3300005983 Bacteria 14391
44 Ga0081540_1005352 3300005983 Bacteria 9598
45 Ga0081540_1019415 3300005983 Bacteria 4130
46 Ga0081539_10000051 3300005985 Bacteria 268337
47 Ga0081539_10023728 3300005985 Bacteria 4007
48 Ga0075365_10031970 3300006038 Bacteria 3379
49 Ga0075368_10015964 3300006042 Bacteria 2791
50 Ga0075363_100000277 3300006048 Bacteria 14859
51 Ga0075364_10066538 3300006051 Bacteria 2367
52 Ga0075367_10027943 3300006178 Bacteria 3214
53 Ga0075369_10076593 3300006186 Bacteria 1479
54 Ga0075366_10019517 3300006195 Bacteria 3924
55 Ga0075366_10129672 3300006195 Bacteria 1521
56 Ga0075370_10065512 3300006353 Bacteria 2072
57 Ga0075434_100086348 3300006871 Bacteria 3137
58 Ga0068865_100005145 3300006881 Bacteria 7916
59 Ga0105240_10080630 3300009093 Bacteria 4002
60 Ga0105245_10074808 3300009098 Bacteria 3083
61 Ga0105245_10093819 3300009098 Bacteria 2766
62 Ga0105247_10034481 3300009101 Bacteria 3082
63 Ga0114129_10179209 3300009147 Bacteria 2885
64 Ga0105243_10031903 3300009148 Bacteria 4065
65 Ga0105243_10212398 3300009148 Bacteria 1705
66 Ga0105241_10049422 3300009174 Bacteria 3203
67 Ga0105241_10128164 3300009174 Bacteria 2051
68 Ga0105242_10020224 3300009176 Bacteria 5219
69 Ga0105248_10240919 3300009177 Bacteria 2036
70 Ga0105237_10028642 3300009545 Bacteria 5671
71 Ga0105237_10096358 3300009545 Bacteria 2949
72 Ga0105237_10159305 3300009545 Bacteria 2255
73 Ga0105238_10024439 3300009551 Bacteria 6158
74 Ga0105238_10082320 3300009551 Bacteria 3208
75 Ga0105249_10058601 3300009553 Bacteria 3529
76 Ga0105249_10138207 3300009553 Bacteria 2334
77 Ga0105239_10027224 3300010375 Bacteria 6293
78 Ga0105239_10261485 3300010375 Bacteria 1945
79 Ga0105246_10119643 3300011119 Bacteria 1949
80 Ga0157374_10010990 3300013296 Bacteria 7817
81 Ga0157378_10009956 3300013297 Bacteria 8288
82 Ga0157378_10190446 3300013297 Bacteria 1934
83 Ga0163162_10249815 3300013306 Bacteria 1906
84 Ga0163162_10256910 3300013306 Bacteria 1879
85 Ga0157375_10070517 3300013308 Bacteria 3505
86 Ga0157380_10022255 3300014326 Bacteria 4768
87 Ga0157379_10100068 3300014968 Bacteria 2603
88 Ga0209455_1003963 3300025272 Bacteria 5024
89 Ga0209758_1006929 3300025297 Bacteria 7905
90 Ga0209758_1008526 3300025297 Bacteria 6609
91 Ga0209758_1009526 3300025297 Bacteria 6014
92 Ga0207710_10029580 3300025900 Bacteria 2385
93 Ga0207688_10011419 3300025901 Bacteria 4836
94 Ga0207645_10063028 3300025907 Bacteria 2369
95 Ga0207643_10044570 3300025908 Bacteria 2504
96 Ga0207707_10003249 3300025912 Bacteria 14436
97 Ga0207707_10082513 3300025912 Bacteria 2807
98 Ga0207695_10061151 3300025913 Bacteria 3894
99 Ga0207660_10022983 3300025917 Bacteria 4206
100 Ga0207657_10104557 3300025919 Bacteria 2345
101 Ga0207652_10034575 3300025921 Bacteria 4260
102 Ga0207694_10051929 3300025924 Bacteria 3177
103 Ga0207694_10199056 3300025924 Bacteria 1629
104 Ga0207687_10069290 3300025927 Bacteria 2515
105 Ga0207690_10049360 3300025932 Bacteria 2805
106 Ga0207706_10012680 3300025933 Bacteria 7671
107 Ga0207706_10013413 3300025933 Bacteria 7450
108 Ga0207709_10019686 3300025935 Bacteria 3799
109 Ga0207691_10010741 3300025940 Bacteria 8789
110 Ga0207691_10177161 3300025940 Bacteria 1864
111 Ga0207691_10177331 3300025940 Bacteria 1863
112 Ga0207711_10041065 3300025941 Bacteria 3938
113 Ga0207689_10033771 3300025942 Bacteria 4250
114 Ga0207667_10290275 3300025949 Bacteria 1671
115 Ga0207668_10018691 3300025972 Bacteria 4368
116 Ga0207668_10104683 3300025972 Bacteria 2110
117 Ga0207639_10056766 3300026041 Bacteria 3002
118 Ga0207678_10007632 3300026067 Bacteria 9557
119 Ga0207678_10011088 3300026067 Bacteria 7918
120 Ga0207678_10015689 3300026067 Bacteria 6657
121 Ga0207708_10109550 3300026075 Bacteria 2142
122 Ga0207648_10057457 3300026089 Bacteria 3395
123 Ga0207676_10191997 3300026095 Bacteria 1798
124 Ga0207674_10036648 3300026116 Bacteria 5107
125 Ga0207674_10240211 3300026116 Bacteria 1758
126 Ga0207675_100042536 3300026118 Bacteria 4243
127 Ga0207675_100118185 3300026118 Bacteria 2507
128 Ga0207675_100137486 3300026118 Bacteria 2319
129 Ga0207675_100142444 3300026118 Bacteria 2278
130 Ga0207683_10009468 3300026121 Bacteria 8301
131 Ga0207683_10027324 3300026121 Bacteria 4931
132 Ga0268266_10001826 3300028379 Bacteria 24057
133 Ga0268266_10003534 3300028379 Bacteria 15519
134 Ga0268266_10033637 3300028379 Bacteria 4357
135 Ga0268266_10049772 3300028379 Bacteria 3594
136 Ga0268266_10078238 3300028379 Bacteria 2877
137 Ga0268265_10029717 3300028380 Bacteria 3927
138 Ga0268265_10034975 3300028380 Bacteria 3666
139 Ga0307517_10000650 3300028786 Bacteria 59699
140 Ga0307515_10010300 3300028794 Bacteria 17945
141 Ga0307516_10106939 3300031730 Bacteria 2607
142 Ga0307405_10067147 3300031731 Bacteria 2290
143 Ga0307406_10041514 3300031901 Bacteria 2867
144 Ga0307412_10075945 3300031911 Bacteria 2307
145 Ga0307412_10178429 3300031911 Bacteria 1595
146 Ga0307409_100116684 3300031995 Bacteria 2251
147 Ga0373926_0009676 3300035083 Bacteria 3220
148 Ga0373923_0024231 3300035111 Bacteria 2394
149 Ga0373953_0025258 3300035117 Bacteria 2268
150 Ga0373956_0095933 3300035119 Bacteria 1371
151 Ga0373943_0022852 3300035170 Bacteria 2903
152 Ga0373946_0050518 3300035171 Bacteria 1737
153 Ga0373935_0133899 3300035692 Bacteria 1668
154 Ga0373927_0026692 3300035695 Bacteria 3775
155 Ga0373933_0093696 3300035724 Bacteria 1856
156 Ga0373947_0067546 3300035725 Bacteria 2184
157 Ga0395899_0080091 3300037312 Bacteria 2378
158 Ga0395900_0001392 3300037418 Bacteria 28939
159 Ga0395900_0166993 3300037418 Bacteria 2242
160 Ga0395898_0023873 3300037466 Bacteria 6173
161 Ga0395898_0153883 3300037466 Unclassified 2200
162 Ga0395901_0007086 3300038443 Bacteria 11332
163 Ga0451802_0098338 3300041460 Bacteria 2193
164 Ga0451807_2264232 3300041486 Bacteria 1442
165 Ga0466963_0067101 3300044694 Bacteria 2407
166 Ga0495592_0031674 3300046454 Bacteria 3995
167 Ga0495603_0017568 3300046455 Bacteria 4331
168 Ga0495603_0039600 3300046455 Bacteria 2823
169 Ga0495629_0102202 3300046459 Bacteria 2000
170 Ga0495641_0027537 3300046461 Bacteria 2763
171 Ga0495580_0057443 3300046472 Bacteria 2738
172 Ga0495639_0011989 3300046475 Bacteria 3737
173 Ga0495664_0022389 3300046477 Bacteria 3662
174 Ga0495606_0001170 3300046507 Bacteria 37016
175 Ga0495618_0055002 3300046514 Bacteria 2519
176 Ga0495628_0027964 3300046516 Bacteria 4585
177 Ga0495630_0007480 3300046517 Bacteria 7806
178 Ga0495631_0034389 3300046518 Bacteria 2272
179 Ga0495644_0020301 3300046523 Bacteria 2535
180 Ga0495652_0078594 3300046529 Bacteria 2730
181 Ga0495665_0015350 3300046531 Bacteria 4125
182 Ga0495640_0024650 3300046533 Bacteria 4374
183 Ga0495609_0053831 3300046538 Bacteria 1788
184 Ga0495645_0095905 3300046543 Bacteria 2114
185 Ga0495656_0001480 3300046615 Bacteria 7690
186 Ga0495656_0007453 3300046615 Bacteria 3865
187 Ga0495668_0071723 3300046616 Bacteria 1903
188 Ga0495625_0066118 3300046660 Bacteria 2547
189 Ga0495635_0056241 3300046663 Bacteria 2709
190 Ga0495659_0009476 3300046664 Bacteria 3109
191 Ga0495659_0019566 3300046664 Bacteria 2266
192 Ga0495588_0019744 3300046674 Bacteria 3305
193 Ga0495657_0145814 3300046675 Unclassified 1473
194 Ga0495646_0080101 3300046680 Bacteria 1905
195 Ga0495647_0046683 3300046681 Bacteria 1669
196 Ga0495669_0056428 3300046684 Bacteria 1770
197 Ga0495589_0033974 3300046794 Bacteria 2560
198 Ga0495581_0050104 3300047315 Bacteria 2412
199 Ga0495604_0104895 3300047317 Bacteria 2070
200 Ga0495672_0010843 3300047320 Bacteria 6466
201 Ga0495672_0023175 3300047320 Bacteria 4024
202 Ga0495676_0109854 3300047321 Bacteria 2025
203 Ga0495685_049253 3300047447 Bacteria 1431
204 Ga0495681_0055464 3300047470 Bacteria 1848
205 Ga0495684_0004704 3300047471 Bacteria 10654
206 Ga0495593_0027227 3300047673 Bacteria 3148
207 Ga0495615_0005421 3300048090 Bacteria 2293
208 Ga0496102_0155094 3300048905 Bacteria 2153
209 Ga0496112_0000004 3300048915 Bacteria 553294
210 Ga0496112_0204320 3300048915 Bacteria 1934
211 Ga0496115_0084537 3300048918 Bacteria 2587
212 Ga0496121_0042870 3300048924 Bacteria 3928
213 Ga0496121_0044971 3300048924 Bacteria 3801
214 Ga0496121_0094463 3300048924 Bacteria 2326
215 Ga0496121_0122087 3300048924 Bacteria 1965
216 Ga0496124_0038445 3300048927 Bacteria 4156
217 Ga0496126_0071573 3300048929 Bacteria 3086
218 Ga0496126_0088949 3300048929 Bacteria 2719
219 Ga0496126_0113345 3300048929 Bacteria 2360
220 Ga0501047_0006304 3300049581 Bacteria 11157
221 Ga0501048_0075965 3300049582 Bacteria 2371
222 Ga0501067_0081484 3300049583 Bacteria 1794
223 Ga0501070_0032179 3300049586 Bacteria 4390
224 Ga0501072_0105509 3300049588 Bacteria 2241
225 Ga0501073_0025025 3300049589 Bacteria 4284
226 Ga0501080_0034098 3300049742 Bacteria 4751
227 Ga0501044_0044627 3300049823 Bacteria 4599
228 nmdc:mga03n38_159_c1 3300050490 Bacteria 12744
229 nmdc:mga00v17_150398_c1 3300050491 Bacteria 1496
230 nmdc:mga0yw44_52768_c1 3300050492 Bacteria 2466
231 nmdc:mga0yw44_69092_c1 3300050492 Bacteria 2187
232 nmdc:mga0k408_83922_c1 3300050493 Bacteria 1868
233 nmdc:mga07m45_20131_c1 3300050496 Bacteria 3622
234 nmdc:mga07m45_3784_c1 3300050496 Bacteria 7321
235 nmdc:mga07m45_68636_c1 3300050496 Bacteria 2015
236 nmdc:mga08y16_252938_c1 3300050511 Bacteria 1820
237 nmdc:mga0n895_126254_c1 3300050512 Bacteria 2582
238 Ga0495601_0085775 3300053077 Bacteria 2023
239 Ga0495612_0032743 3300053078 Bacteria 2101
240 Ga0500641_0007609 3300053096 Bacteria 3864
241 Ga0500641_0012949 3300053096 Bacteria 3057

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046674 Ga0495588_0019744 Ga0495588_0019744_12_1220 392
2 3300047320 Ga0495672_0010843 Ga0495672_0010843_20_1225 401
3 3300026067 Ga0207678_10015689 Ga0207678_100156896 407
4 3300041486 Ga0451807_2264232 Ga0451807_2264232_143_1381 407
5 3300050511 nmdc:mga08y16_252938_c1 nmdc:mga08y16_252938_c1_52_1290 407
6 3300005719 Ga0068861_100215618 Ga0068861_1002156182 409
7 3300026118 Ga0207675_100137486 Ga0207675_1001374862 409
8 3300037312 Ga0395899_0080091 Ga0395899_0080091_227_1558 416
9 3300037418 Ga0395900_0001392 Ga0395900_0001392_8223_9554 416
10 3300037466 Ga0395898_0023873 Ga0395898_0023873_3678_5009 416
11 3300038443 Ga0395901_0007086 Ga0395901_0007086_5403_6734 416
12 3300009101 Ga0105247_10034481 Ga0105247_100344812 417
13 3300035117 Ga0373953_0025258 Ga0373953_0025258_923_2206 418
14 3300046663 Ga0495635_0056241 Ga0495635_0056241_408_1691 418
15 3300049589 Ga0501073_0025025 Ga0501073_0025025_2986_4269 419
16 3300028786 Ga0307517_10000650 Ga0307517_1000065037 421
17 3300026067 Ga0207678_10011088 Ga0207678_100110885 422
18 3300028379 Ga0268266_10078238 Ga0268266_100782383 422
19 3300053096 Ga0500641_0012949 Ga0500641_0012949_1746_3035 422
20 3300037418 Ga0395900_0166993 Ga0395900_0166993_139_1497 423
21 3300037466 Ga0395898_0153883 Ga0395898_0153883_566_1924 423
22 3300048918 Ga0496115_0084537 Ga0496115_0084537_1023_2294 423
23 iso_pu_bacteria 8056681323 8056681403 423
24 3300005937 Ga0081455_10022999 Ga0081455_100229992 424
25 3300005983 Ga0081540_1019415 Ga0081540_10194155 424
26 3300006195 Ga0075366_10019517 Ga0075366_100195172 424
27 3300009147 Ga0114129_10179209 Ga0114129_101792094 424
28 3300025272 Ga0209455_1003963 Ga0209455_10039632 424
29 3300048924 Ga0496121_0044971 Ga0496121_0044971_1973_3247 424
30 3300005457 Ga0070662_100014093 Ga0070662_1000140933 426
31 3300005471 Ga0070698_100210609 Ga0070698_1002106092 426
32 3300005545 Ga0070695_100029603 Ga0070695_1000296032 426
33 3300009148 Ga0105243_10212398 Ga0105243_102123982 426
34 3300009553 Ga0105249_10138207 Ga0105249_101382072 426
35 3300025907 Ga0207645_10063028 Ga0207645_100630282 426
36 3300025942 Ga0207689_10033771 Ga0207689_100337714 426
37 3300026075 Ga0207708_10109550 Ga0207708_101095502 426
38 3300028380 Ga0268265_10029717 Ga0268265_100297172 426
39 3300005347 Ga0070668_100033062 Ga0070668_1000330624 427
40 3300005937 Ga0081455_10085959 Ga0081455_100859592 427
41 3300028379 Ga0268266_10001826 Ga0268266_100018269 427
42 3300046681 Ga0495647_0046683 Ga0495647_0046683_217_1500 427
43 3300005985 Ga0081539_10023728 Ga0081539_100237286 429
44 iso_pu_bacteria 2876808645 2876812640 430
45 3300005347 Ga0070668_100169684 Ga0070668_1001696842 431
46 3300047320 Ga0495672_0023175 Ga0495672_0023175_91_1386 431
47 iso_pu_bacteria 2874604998 2874607019 431
48 iso_pu_bacteria 2922361189 2922364685 431
49 3300005354 Ga0070675_100255630 Ga0070675_1002556302 432
50 3300025940 Ga0207691_10177331 Ga0207691_101773312 432
51 3300035083 Ga0373926_0009676 Ga0373926_0009676_1769_3094 432
52 3300035111 Ga0373923_0024231 Ga0373923_0024231_812_2137 432
53 3300035171 Ga0373946_0050518 Ga0373946_0050518_321_1646 432
54 3300035725 Ga0373947_0067546 Ga0373947_0067546_366_1691 432
55 3300046454 Ga0495592_0031674 Ga0495592_0031674_1116_2441 432
56 3300046472 Ga0495580_0057443 Ga0495580_0057443_1195_2520 432
57 3300046475 Ga0495639_0011989 Ga0495639_0011989_1159_2484 432
58 3300046477 Ga0495664_0022389 Ga0495664_0022389_512_1837 432
59 3300046514 Ga0495618_0055002 Ga0495618_0055002_86_1411 432
60 3300046516 Ga0495628_0027964 Ga0495628_0027964_315_1640 432
61 3300046517 Ga0495630_0007480 Ga0495630_0007480_50_1375 432
62 3300046529 Ga0495652_0078594 Ga0495652_0078594_1221_2546 432
63 3300046531 Ga0495665_0015350 Ga0495665_0015350_502_1827 432
64 3300046533 Ga0495640_0024650 Ga0495640_0024650_2252_3577 432
65 3300046543 Ga0495645_0095905 Ga0495645_0095905_34_1359 432
66 3300046680 Ga0495646_0080101 Ga0495646_0080101_270_1595 432
67 3300047315 Ga0495581_0050104 Ga0495581_0050104_239_1537 432
68 3300047317 Ga0495604_0104895 Ga0495604_0104895_276_1601 432
69 3300047471 Ga0495684_0004704 Ga0495684_0004704_9182_10507 432
70 3300047673 Ga0495593_0027227 Ga0495593_0027227_273_1598 432
71 3300053077 Ga0495601_0085775 Ga0495601_0085775_16_1341 432
72 3300053078 Ga0495612_0032743 Ga0495612_0032743_265_1590 432
73 3300049581 Ga0501047_0006304 Ga0501047_0006304_6208_7533 433
74 3300049586 Ga0501070_0032179 Ga0501070_0032179_496_1821 433
75 3300049742 Ga0501080_0034098 Ga0501080_0034098_3332_4657 433
76 3300049823 Ga0501044_0044627 Ga0501044_0044627_2812_4137 433
77 3300009174 Ga0105241_10128164 Ga0105241_101281642 434
78 3300010375 Ga0105239_10261485 Ga0105239_102614852 434
79 3300025919 Ga0207657_10104557 Ga0207657_101045573 434
80 3300048924 Ga0496121_0094463 Ga0496121_0094463_311_1630 434
81 3300048927 Ga0496124_0038445 Ga0496124_0038445_1046_2365 434
82 3300049583 Ga0501067_0081484 Ga0501067_0081484_425_1732 434
83 3300050490 nmdc:mga03n38_159_c1 nmdc:mga03n38_159_c1_9466_10800 434
84 3300050492 nmdc:mga0yw44_69092_c1 nmdc:mga0yw44_69092_c1_406_1740 434
85 3300050496 nmdc:mga07m45_3784_c1 nmdc:mga07m45_3784_c1_561_1895 434
86 3300005543 Ga0070672_100022884 Ga0070672_1000228842 435
87 3300005843 Ga0068860_100059164 Ga0068860_1000591642 435
88 3300013306 Ga0163162_10256910 Ga0163162_102569102 435
89 3300025297 Ga0209758_1006929 Ga0209758_10069298 435
90 3300025972 Ga0207668_10018691 Ga0207668_100186913 435
91 3300026118 Ga0207675_100042536 Ga0207675_1000425362 435
92 3300026121 Ga0207683_10027324 Ga0207683_100273244 435
93 3300046459 Ga0495629_0102202 Ga0495629_0102202_82_1404 435
94 3300046660 Ga0495625_0066118 Ga0495625_0066118_581_1888 435
95 3300046684 Ga0495669_0056428 Ga0495669_0056428_183_1505 435
96 3300047321 Ga0495676_0109854 Ga0495676_0109854_13_1350 435
97 3300047470 Ga0495681_0055464 Ga0495681_0055464_12_1334 435
98 iso_pu_bacteria 2889033259 2889034885 437
99 3300005577 Ga0068857_100089291 Ga0068857_1000892914 438
100 3300013306 Ga0163162_10249815 Ga0163162_102498152 438
101 3300026116 Ga0207674_10036648 Ga0207674_100366482 438
102 3300005563 Ga0068855_100195179 Ga0068855_1001951792 439
103 3300006051 Ga0075364_10066538 Ga0075364_100665382 439
104 3300006186 Ga0075369_10076593 Ga0075369_100765931 439
105 3300009545 Ga0105237_10028642 Ga0105237_100286424 439
106 3300009551 Ga0105238_10024439 Ga0105238_100244396 439
107 3300010375 Ga0105239_10027224 Ga0105239_100272243 439
108 3300013296 Ga0157374_10010990 Ga0157374_100109908 439
109 3300025924 Ga0207694_10051929 Ga0207694_100519294 439
110 3300028794 Ga0307515_10010300 Ga0307515_100103003 439
111 iso_pu_bacteria 2524023210 2524467885 439
112 3300011119 Ga0105246_10119643 Ga0105246_101196432 440
113 3300044694 Ga0466963_0067101 Ga0466963_0067101_723_2045 440
114 3300005336 Ga0070680_100014356 Ga0070680_1000143564 441
115 3300005337 Ga0070682_100015296 Ga0070682_1000152967 441
116 3300005458 Ga0070681_10009008 Ga0070681_1000900812 441
117 3300005458 Ga0070681_10166942 Ga0070681_101669422 441
118 3300005563 Ga0068855_100117740 Ga0068855_1001177403 441
119 3300009093 Ga0105240_10080630 Ga0105240_100806304 441
120 3300009174 Ga0105241_10049422 Ga0105241_100494222 441
121 3300009551 Ga0105238_10082320 Ga0105238_100823202 441
122 3300025912 Ga0207707_10003249 Ga0207707_1000324914 441
123 3300025912 Ga0207707_10082513 Ga0207707_100825131 441
124 3300025913 Ga0207695_10061151 Ga0207695_100611514 441
125 3300025917 Ga0207660_10022983 Ga0207660_100229834 441
126 3300025921 Ga0207652_10034575 Ga0207652_100345755 441
127 3300025924 Ga0207694_10199056 Ga0207694_101990562 441
128 3300025949 Ga0207667_10290275 Ga0207667_102902751 441
129 3300035119 Ga0373956_0095933 Ga0373956_0095933_10_1335 441
130 3300035170 Ga0373943_0022852 Ga0373943_0022852_549_1874 441
131 3300035724 Ga0373933_0093696 Ga0373933_0093696_301_1626 441
132 3300046675 Ga0495657_0145814 Ga0495657_0145814_29_1354 441
133 3300048929 Ga0496126_0071573 Ga0496126_0071573_1688_3013 441
134 iso_pu_bacteria 2721755755 2723849082 441
135 iso_pu_bacteria 2879110137 2879115089 441
136 iso_pu_bacteria 2922386360 2922391847 441
137 iso_pu_bacteria 8006964411 8006972502 441
138 iso_pu_bacteria 8006984368 8006988529 441
139 iso_pu_bacteria 8006994254 8006995265 441
140 3300003659 JGI25404J52841_10000011 JGI25404J52841_1000001117 443
141 3300005937 Ga0081455_10001156 Ga0081455_1000115631 443
142 3300005983 Ga0081540_1000460 Ga0081540_100046049 443
143 3300031731 Ga0307405_10067147 Ga0307405_100671472 443
144 3300031901 Ga0307406_10041514 Ga0307406_100415141 443
145 iso_pu_bacteria 2513237101 2513694431 443
146 3300003322 rootL2_10094270 rootL2_100942702 445
147 3300005334 Ga0068869_100030289 Ga0068869_1000302893 445
148 3300005344 Ga0070661_100041073 Ga0070661_1000410732 445
149 3300005347 Ga0070668_100028257 Ga0070668_1000282575 445
150 3300005347 Ga0070668_100096945 Ga0070668_1000969452 445
151 3300005356 Ga0070674_100132564 Ga0070674_1001325642 445
152 3300005455 Ga0070663_100007109 Ga0070663_1000071096 445
153 3300005548 Ga0070665_100075942 Ga0070665_1000759423 445
154 3300005618 Ga0068864_100154058 Ga0068864_1001540582 445
155 3300005840 Ga0068870_10033981 Ga0068870_100339812 445
156 3300005842 Ga0068858_100076142 Ga0068858_1000761422 445
157 3300005843 Ga0068860_100077526 Ga0068860_1000775262 445
158 3300006038 Ga0075365_10031970 Ga0075365_100319704 445
159 3300006042 Ga0075368_10015964 Ga0075368_100159642 445
160 3300006048 Ga0075363_100000277 Ga0075363_10000027711 445
161 3300006178 Ga0075367_10027943 Ga0075367_100279433 445
162 3300006195 Ga0075366_10129672 Ga0075366_101296722 445
163 3300006353 Ga0075370_10065512 Ga0075370_100655122 445
164 3300006871 Ga0075434_100086348 Ga0075434_1000863483 445
165 3300009098 Ga0105245_10074808 Ga0105245_100748084 445
166 3300009177 Ga0105248_10240919 Ga0105248_102409192 445
167 3300009545 Ga0105237_10096358 Ga0105237_100963582 445
168 3300009545 Ga0105237_10159305 Ga0105237_101593053 445
169 3300013297 Ga0157378_10009956 Ga0157378_100099569 445
170 3300025297 Ga0209758_1008526 Ga0209758_10085267 445
171 3300025297 Ga0209758_1009526 Ga0209758_10095262 445
172 3300025900 Ga0207710_10029580 Ga0207710_100295803 445
173 3300025908 Ga0207643_10044570 Ga0207643_100445702 445
174 3300025927 Ga0207687_10069290 Ga0207687_100692902 445
175 3300025933 Ga0207706_10012680 Ga0207706_100126808 445
176 3300025940 Ga0207691_10177161 Ga0207691_101771612 445
177 3300025941 Ga0207711_10041065 Ga0207711_100410655 445
178 3300025972 Ga0207668_10104683 Ga0207668_101046832 445
179 3300026041 Ga0207639_10056766 Ga0207639_100567664 445
180 3300026067 Ga0207678_10007632 Ga0207678_100076328 445
181 3300026095 Ga0207676_10191997 Ga0207676_101919972 445
182 3300026116 Ga0207674_10240211 Ga0207674_102402111 445
183 3300026118 Ga0207675_100118185 Ga0207675_1001181852 445
184 3300026118 Ga0207675_100142444 Ga0207675_1001424441 445
185 3300026121 Ga0207683_10009468 Ga0207683_100094685 445
186 3300028379 Ga0268266_10003534 Ga0268266_1000353411 445
187 3300028379 Ga0268266_10033637 Ga0268266_100336372 445
188 3300028379 Ga0268266_10049772 Ga0268266_100497723 445
189 3300028380 Ga0268265_10034975 Ga0268265_100349752 445
190 3300031730 Ga0307516_10106939 Ga0307516_101069393 445
191 3300031911 Ga0307412_10075945 Ga0307412_100759452 445
192 3300031911 Ga0307412_10178429 Ga0307412_101784292 445
193 3300031995 Ga0307409_100116684 Ga0307409_1001166842 445
194 3300035692 Ga0373935_0133899 Ga0373935_0133899_188_1534 445
195 3300035695 Ga0373927_0026692 Ga0373927_0026692_184_1530 445
196 3300041460 Ga0451802_0098338 Ga0451802_0098338_758_2110 445
197 3300046455 Ga0495603_0017568 Ga0495603_0017568_319_1665 445
198 3300046455 Ga0495603_0039600 Ga0495603_0039600_177_1544 445
199 3300046461 Ga0495641_0027537 Ga0495641_0027537_282_1649 445
200 3300046518 Ga0495631_0034389 Ga0495631_0034389_717_2084 445
201 3300046523 Ga0495644_0020301 Ga0495644_0020301_429_1781 445
202 3300046538 Ga0495609_0053831 Ga0495609_0053831_244_1611 445
203 3300046615 Ga0495656_0007453 Ga0495656_0007453_1786_3138 445
204 3300046616 Ga0495668_0071723 Ga0495668_0071723_211_1578 445
205 3300046664 Ga0495659_0009476 Ga0495659_0009476_1555_2907 445
206 3300046794 Ga0495589_0033974 Ga0495589_0033974_1106_2473 445
207 3300048090 Ga0495615_0005421 Ga0495615_0005421_885_2237 445
208 3300048915 Ga0496112_0204320 Ga0496112_0204320_69_1427 445
209 3300048924 Ga0496121_0042870 Ga0496121_0042870_181_1548 445
210 3300048924 Ga0496121_0122087 Ga0496121_0122087_300_1652 445
211 3300048929 Ga0496126_0088949 Ga0496126_0088949_1151_2503 445
212 3300048929 Ga0496126_0113345 Ga0496126_0113345_445_1812 445
213 3300050491 nmdc:mga00v17_150398_c1 nmdc:mga00v17_150398_c1_19_1377 445
214 3300050492 nmdc:mga0yw44_52768_c1 nmdc:mga0yw44_52768_c1_94_1455 445
215 3300050493 nmdc:mga0k408_83922_c1 nmdc:mga0k408_83922_c1_70_1422 445
216 3300050496 nmdc:mga07m45_20131_c1 nmdc:mga07m45_20131_c1_568_1941 445
217 3300050496 nmdc:mga07m45_68636_c1 nmdc:mga07m45_68636_c1_264_1631 445
218 3300050512 nmdc:mga0n895_126254_c1 nmdc:mga0n895_126254_c1_322_1680 445
219 3300053096 Ga0500641_0007609 Ga0500641_0007609_655_2016 445
220 3300003659 JGI25404J52841_10005431 JGI25404J52841_100054313 446
221 3300005356 Ga0070674_100006149 Ga0070674_1000061492 446
222 3300005366 Ga0070659_100110046 Ga0070659_1001100462 446
223 3300005438 Ga0070701_10047762 Ga0070701_100477622 446
224 3300005456 Ga0070678_100036480 Ga0070678_1000364802 446
225 3300005457 Ga0070662_100021925 Ga0070662_1000219255 446
226 3300005459 Ga0068867_100024071 Ga0068867_1000240713 446
227 3300005539 Ga0068853_100085074 Ga0068853_1000850742 446
228 3300005983 Ga0081540_1002719 Ga0081540_10027196 446
229 3300005983 Ga0081540_1005352 Ga0081540_10053529 446
230 3300006881 Ga0068865_100005145 Ga0068865_1000051457 446
231 3300009098 Ga0105245_10093819 Ga0105245_100938193 446
232 3300009148 Ga0105243_10031903 Ga0105243_100319035 446
233 3300009176 Ga0105242_10020224 Ga0105242_100202245 446
234 3300009553 Ga0105249_10058601 Ga0105249_100586015 446
235 3300013308 Ga0157375_10070517 Ga0157375_100705173 446
236 3300014326 Ga0157380_10022255 Ga0157380_100222551 446
237 3300014968 Ga0157379_10100068 Ga0157379_101000683 446
238 3300025901 Ga0207688_10011419 Ga0207688_100114195 446
239 3300025932 Ga0207690_10049360 Ga0207690_100493602 446
240 3300025933 Ga0207706_10013413 Ga0207706_100134137 446
241 3300025935 Ga0207709_10019686 Ga0207709_100196865 446
242 3300025940 Ga0207691_10010741 Ga0207691_100107418 446
243 3300026089 Ga0207648_10057457 Ga0207648_100574574 446
244 3300046615 Ga0495656_0001480 Ga0495656_0001480_6108_7460 446
245 3300046664 Ga0495659_0019566 Ga0495659_0019566_896_2248 446
246 3300047447 Ga0495685_049253 Ga0495685_049253_42_1394 446
247 3300048905 Ga0496102_0155094 Ga0496102_0155094_17_1369 446
248 3300049582 Ga0501048_0075965 Ga0501048_0075965_610_1962 446
249 3300049588 Ga0501072_0105509 Ga0501072_0105509_488_1840 446
250 3300013297 Ga0157378_10190446 Ga0157378_101904462 447
251 3300046507 Ga0495606_0001170 Ga0495606_0001170_26724_28070 447
252 3300048915 Ga0496112_0000004 Ga0496112_0000004_468810_470156 447
253 3300003203 JGI25406J46586_10000021 JGI25406J46586_1000002127 448
254 3300005985 Ga0081539_10000051 Ga0081539_10000051120 448

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07730

HisKA_3

Histidine kinase

246

312

0.99

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

352

442

0.84

Feature Viewer

pLDDT pTM Quality
77.03 0.41 Low
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Predicted Structure (AlphaFold2)

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