F364450
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 253 | 134 | 246 | 282 |
Family's Representative Sequence
| Representative Sequence | 3300053086|Ga0500578_0000312|Ga0500578_0000312_13139_14086 |
| Length | 315 |
| Sequence | LRQAEYFIIYKAFYYTVAVAALRQKAATFVYLLMNKMENKHNLELARSGDINAFQTLFAEFQNQLKSYLYRLLTDRNDVDDLAHDTFIKAFSKISTFNQESSLKTWVFKIATNLAYDHLRKLKRWGADAQDRAADLAISSEEIRQVFWMVHDNSPAGAYEMKEHIDYCFTCISKTLPIENQVALILKNIYDFHVKEIGLILEKTEGVIKHLLNDARNIMTDIFENRCALINKNGVCHQCSHINEIFNPKQDQQEELMKLELVKASKKYNREQLFALRTALVKAIDPLHAAGTDFHEEIMRCLRTAIGEKSSFFDK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2738541283 | Pedobacter sp. OK701 | Isolate | Unclassified |
| 2 | 2818991460 | Chitinophaga polysaccharea 1209 | Isolate | Unclassified |
| 3 | 2896085136 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 4 | 2929177148 | Chitinophaga sp. R-72269 Hybrid assembly | Isolate | Unclassified |
| 5 | 2929921140 | Chitinophaga sp. R-72609 Hybrid assembly | Isolate | Unclassified |
| 6 | 2945977869 | Chitinophaga sp. W2I13 | Isolate | Rhizosphere |
| 7 | 2946013367 | Chitinophaga sp. W3I9 | Isolate | Rhizosphere |
| 8 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 9 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 10 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 11 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 12 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 13 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 14 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 15 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 16 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 17 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 18 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 19 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 20 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 21 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 22 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 23 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 27 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 29 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 30 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 31 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 32 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 33 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 34 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 35 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 36 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 37 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 39 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 40 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 41 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 54 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 58 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 59 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 61 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 63 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 88 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 89 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 90 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 91 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 92 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 93 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 94 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 95 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 96 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 97 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 98 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 99 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 100 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 101 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 102 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 103 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 114 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 115 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 116 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 117 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 120 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 121 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 122 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 123 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 124 | 3300053098 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere | Metagenome | Endosphere |
| 125 | 3300053105 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere | Metagenome | Endosphere |
| 126 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 127 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 128 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 129 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 130 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 131 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 132 | 3300053146 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere | Metagenome | Endosphere |
| 133 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 134 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.23 |
| Metatranscriptomes | 0 |
| Isolates | 2.77 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 22.92 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 68.38 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 8.7 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10002670 | 3300001979 | Bacteria | 8008 |
| 2 | JGI24739J22299_10016913 | 3300001989 | Bacteria | 2636 |
| 3 | JGI25154J39366_1000004 | 3300002738 | Bacteria | 346460 |
| 4 | JGI25157J39369_1002034 | 3300002741 | Bacteria | 5797 |
| 5 | JGI25153J46596_10001654 | 3300003215 | Bacteria | 13203 |
| 6 | JGI25153J46596_10025444 | 3300003215 | Bacteria | 2114 |
| 7 | rootH1_10062154 | 3300003316 | Bacteria | 8598 |
| 8 | rootH2_10010336 | 3300003320 | Bacteria | 8014 |
| 9 | rootH2_10193910 | 3300003320 | Bacteria | 4299 |
| 10 | rootL2_10095509 | 3300003322 | Bacteria | 9400 |
| 11 | rootL2_10150691 | 3300003322 | Bacteria | 2971 |
| 12 | rootH1_10003031 | 3300003323 | Bacteria | 56969 |
| 13 | rootH1_10063931 | 3300003323 | Bacteria | 7120 |
| 14 | rootH1_10095515 | 3300003323 | Unclassified | 1833 |
| 15 | JGI25160J50197_1005498 | 3300003354 | Bacteria | 5265 |
| 16 | Ga0055526_1002038 | 3300003771 | Bacteria | 13904 |
| 17 | Ga0055526_1004591 | 3300003771 | Bacteria | 8236 |
| 18 | Ga0055528_1000232 | 3300003790 | Bacteria | 46543 |
| 19 | Ga0055530_10002196 | 3300003791 | Bacteria | 12907 |
| 20 | Ga0055530_10002268 | 3300003791 | Bacteria | 12636 |
| 21 | Ga0055530_10004531 | 3300003791 | Bacteria | 7106 |
| 22 | Ga0055531_10000118 | 3300003794 | Bacteria | 88104 |
| 23 | Ga0055531_10023537 | 3300003794 | Unclassified | 2304 |
| 24 | Ga0065165_1000010 | 3300005262 | Bacteria | 323737 |
| 25 | Ga0065165_1051262 | 3300005262 | Bacteria | 1171 |
| 26 | Ga0070670_100067908 | 3300005331 | Bacteria | 3059 |
| 27 | Ga0070666_10147004 | 3300005335 | Bacteria | 1643 |
| 28 | Ga0070663_100013727 | 3300005455 | Bacteria | 5178 |
| 29 | Ga0068853_100013768 | 3300005539 | Bacteria | 6608 |
| 30 | Ga0070665_100001763 | 3300005548 | Bacteria | 24676 |
| 31 | Ga0068855_100089395 | 3300005563 | Bacteria | 3556 |
| 32 | Ga0068855_100207894 | 3300005563 | Bacteria | 2201 |
| 33 | Ga0068857_100151693 | 3300005577 | Bacteria | 2100 |
| 34 | Ga0068854_100028781 | 3300005578 | Bacteria | 3842 |
| 35 | Ga0068854_100219020 | 3300005578 | Bacteria | 1505 |
| 36 | Ga0068856_100005216 | 3300005614 | Bacteria | 12823 |
| 37 | Ga0068856_100049731 | 3300005614 | Bacteria | 4132 |
| 38 | Ga0068856_100100142 | 3300005614 | Bacteria | 2890 |
| 39 | Ga0068856_100325214 | 3300005614 | Archaea | 1555 |
| 40 | Ga0068856_100496589 | 3300005614 | Bacteria | 1241 |
| 41 | Ga0068852_100051339 | 3300005616 | Unclassified | 3538 |
| 42 | Ga0068852_100082364 | 3300005616 | Bacteria | 2859 |
| 43 | Ga0068864_100135624 | 3300005618 | Bacteria | 2216 |
| 44 | Ga0068861_100296845 | 3300005719 | Bacteria | 1398 |
| 45 | Ga0081538_10024605 | 3300005981 | Bacteria | 4284 |
| 46 | Ga0081538_10026389 | 3300005981 | Bacteria | 4064 |
| 47 | Ga0081538_10051852 | 3300005981 | Bacteria | 2458 |
| 48 | Ga0081538_10081431 | 3300005981 | Unclassified | 1722 |
| 49 | Ga0075366_10004415 | 3300006195 | Bacteria | 7550 |
| 50 | Ga0075366_10267887 | 3300006195 | Bacteria | 1043 |
| 51 | Ga0097621_100055015 | 3300006237 | Bacteria | 3249 |
| 52 | Ga0068871_100204514 | 3300006358 | Bacteria | 1706 |
| 53 | Ga0075430_100058978 | 3300006846 | Bacteria | 3226 |
| 54 | Ga0075431_100067520 | 3300006847 | Bacteria | 3691 |
| 55 | Ga0105240_10000020 | 3300009093 | Bacteria | 399699 |
| 56 | Ga0105240_10001009 | 3300009093 | Bacteria | 50206 |
| 57 | Ga0105240_10001179 | 3300009093 | Bacteria | 45780 |
| 58 | Ga0105240_10004092 | 3300009093 | Bacteria | 22408 |
| 59 | Ga0105240_10006693 | 3300009093 | Bacteria | 16900 |
| 60 | Ga0105240_10013372 | 3300009093 | Bacteria | 11273 |
| 61 | Ga0105240_10017859 | 3300009093 | Bacteria | 9544 |
| 62 | Ga0105240_10092196 | 3300009093 | Bacteria | 3700 |
| 63 | Ga0105240_10093631 | 3300009093 | Bacteria | 3667 |
| 64 | Ga0105240_10133527 | 3300009093 | Bacteria | 2974 |
| 65 | Ga0105240_10251996 | 3300009093 | Bacteria | 2041 |
| 66 | Ga0105240_10604765 | 3300009093 | Bacteria | 1207 |
| 67 | Ga0105241_10033120 | 3300009174 | Bacteria | 3878 |
| 68 | Ga0105241_10050818 | 3300009174 | Bacteria | 3160 |
| 69 | Ga0105241_10100613 | 3300009174 | Unclassified | 2297 |
| 70 | Ga0105237_10001119 | 3300009545 | Bacteria | 35923 |
| 71 | Ga0105237_10001860 | 3300009545 | Bacteria | 26993 |
| 72 | Ga0105237_10002300 | 3300009545 | Bacteria | 23745 |
| 73 | Ga0105237_10006321 | 3300009545 | Bacteria | 13166 |
| 74 | Ga0105237_10019023 | 3300009545 | Bacteria | 7099 |
| 75 | Ga0105237_10108793 | 3300009545 | Bacteria | 2763 |
| 76 | Ga0105237_10181880 | 3300009545 | Bacteria | 2103 |
| 77 | Ga0105237_10522217 | 3300009545 | Bacteria | 1194 |
| 78 | Ga0105238_10017836 | 3300009551 | Bacteria | 7217 |
| 79 | Ga0105238_10033626 | 3300009551 | Bacteria | 5217 |
| 80 | Ga0105238_10057174 | 3300009551 | Bacteria | 3912 |
| 81 | Ga0105239_10000064 | 3300010375 | Bacteria | 151674 |
| 82 | Ga0105239_10000097 | 3300010375 | Bacteria | 122808 |
| 83 | Ga0105239_10000786 | 3300010375 | Bacteria | 45039 |
| 84 | Ga0105239_10001142 | 3300010375 | Bacteria | 36539 |
| 85 | Ga0105239_10001356 | 3300010375 | Bacteria | 32929 |
| 86 | Ga0105239_10003965 | 3300010375 | Bacteria | 17933 |
| 87 | Ga0105239_10010291 | 3300010375 | Bacteria | 10478 |
| 88 | Ga0105239_10012971 | 3300010375 | Bacteria | 9271 |
| 89 | Ga0105239_10018710 | 3300010375 | Bacteria | 7653 |
| 90 | Ga0105239_10165791 | 3300010375 | Unclassified | 2470 |
| 91 | Ga0105239_10187945 | 3300010375 | Bacteria | 2312 |
| 92 | Ga0105239_10367947 | 3300010375 | Unclassified | 1624 |
| 93 | Ga0157373_10063811 | 3300013100 | Unclassified | 2607 |
| 94 | Ga0157371_10005170 | 3300013102 | Bacteria | 11108 |
| 95 | Ga0157371_10091752 | 3300013102 | Bacteria | 2151 |
| 96 | Ga0157370_10018429 | 3300013104 | Bacteria | 7021 |
| 97 | Ga0157370_10150132 | 3300013104 | Bacteria | 2169 |
| 98 | Ga0157370_10185739 | 3300013104 | Bacteria | 1930 |
| 99 | Ga0157369_10001695 | 3300013105 | Bacteria | 26849 |
| 100 | Ga0157369_10021216 | 3300013105 | Bacteria | 7263 |
| 101 | Ga0157369_10571564 | 3300013105 | Bacteria | 1168 |
| 102 | Ga0157374_10000009 | 3300013296 | Bacteria | 564330 |
| 103 | Ga0163162_10003648 | 3300013306 | Bacteria | 14769 |
| 104 | Ga0163162_10019924 | 3300013306 | Bacteria | 6589 |
| 105 | Ga0157372_10000011 | 3300013307 | Bacteria | 277202 |
| 106 | Ga0157372_10001559 | 3300013307 | Bacteria | 24954 |
| 107 | Ga0157372_10092443 | 3300013307 | Unclassified | 3442 |
| 108 | Ga0157372_10450472 | 3300013307 | Bacteria | 1500 |
| 109 | Ga0182008_10004356 | 3300014497 | Bacteria | 8282 |
| 110 | Ga0157376_10001573 | 3300014969 | Bacteria | 15081 |
| 111 | Ga0157376_10044935 | 3300014969 | Bacteria | 3634 |
| 112 | Ga0163161_10001139 | 3300017792 | Bacteria | 19997 |
| 113 | Ga0209436_104126 | 3300025208 | Bacteria | 3654 |
| 114 | Ga0209646_1000025 | 3300025246 | Bacteria | 406493 |
| 115 | Ga0209026_1001631 | 3300025250 | Bacteria | 9540 |
| 116 | Ga0209455_1001774 | 3300025272 | Bacteria | 9140 |
| 117 | Ga0209673_1000082 | 3300025273 | Bacteria | 219716 |
| 118 | Ga0209673_1024570 | 3300025273 | Bacteria | 2021 |
| 119 | Ga0209130_1003813 | 3300025284 | Bacteria | 6108 |
| 120 | Ga0209564_1000938 | 3300025295 | Bacteria | 37831 |
| 121 | Ga0209564_1002571 | 3300025295 | Bacteria | 13956 |
| 122 | Ga0209758_1003375 | 3300025297 | Bacteria | 14619 |
| 123 | Ga0209758_1004606 | 3300025297 | Bacteria | 11330 |
| 124 | Ga0209758_1020346 | 3300025297 | Bacteria | 3144 |
| 125 | Ga0209050_1001552 | 3300025298 | Bacteria | 23993 |
| 126 | Ga0209050_1003308 | 3300025298 | Bacteria | 12056 |
| 127 | Ga0209050_1003884 | 3300025298 | Bacteria | 10614 |
| 128 | Ga0209050_1006294 | 3300025298 | Bacteria | 7091 |
| 129 | Ga0207426_1000261 | 3300025302 | Bacteria | 112697 |
| 130 | Ga0207426_1000288 | 3300025302 | Bacteria | 100477 |
| 131 | Ga0207426_1001628 | 3300025302 | Bacteria | 17671 |
| 132 | Ga0207426_1005220 | 3300025302 | Bacteria | 6018 |
| 133 | Ga0207426_1017719 | 3300025302 | Unclassified | 2526 |
| 134 | Ga0209257_1000007 | 3300025304 | Bacteria | 1564415 |
| 135 | Ga0209257_1003874 | 3300025304 | Bacteria | 12213 |
| 136 | Ga0207642_10286184 | 3300025899 | Unclassified | 950 |
| 137 | Ga0207680_10141195 | 3300025903 | Bacteria | 1597 |
| 138 | Ga0207647_10001704 | 3300025904 | Bacteria | 16907 |
| 139 | Ga0207647_10010254 | 3300025904 | Bacteria | 6620 |
| 140 | Ga0207654_10072369 | 3300025911 | Bacteria | 2052 |
| 141 | Ga0207654_10101024 | 3300025911 | Unclassified | 1777 |
| 142 | Ga0207695_10000020 | 3300025913 | Bacteria | 723025 |
| 143 | Ga0207695_10000077 | 3300025913 | Bacteria | 307107 |
| 144 | Ga0207695_10000361 | 3300025913 | Bacteria | 104230 |
| 145 | Ga0207695_10000431 | 3300025913 | Bacteria | 91965 |
| 146 | Ga0207695_10005425 | 3300025913 | Bacteria | 16924 |
| 147 | Ga0207695_10028129 | 3300025913 | Bacteria | 6242 |
| 148 | Ga0207695_10055476 | 3300025913 | Bacteria | 4129 |
| 149 | Ga0207695_10059971 | 3300025913 | Bacteria | 3942 |
| 150 | Ga0207695_10085321 | 3300025913 | Bacteria | 3187 |
| 151 | Ga0207695_10088172 | 3300025913 | Unclassified | 3124 |
| 152 | Ga0207695_10132515 | 3300025913 | Bacteria | 2448 |
| 153 | Ga0207695_10194422 | 3300025913 | Bacteria | 1945 |
| 154 | Ga0207671_10000438 | 3300025914 | Bacteria | 57265 |
| 155 | Ga0207671_10001278 | 3300025914 | Bacteria | 29614 |
| 156 | Ga0207671_10002174 | 3300025914 | Bacteria | 21301 |
| 157 | Ga0207671_10004449 | 3300025914 | Bacteria | 13393 |
| 158 | Ga0207671_10004514 | 3300025914 | Bacteria | 13245 |
| 159 | Ga0207671_10004994 | 3300025914 | Bacteria | 12420 |
| 160 | Ga0207671_10036223 | 3300025914 | Bacteria | 3658 |
| 161 | Ga0207671_10053926 | 3300025914 | Bacteria | 2980 |
| 162 | Ga0207671_10058620 | 3300025914 | Unclassified | 2855 |
| 163 | Ga0207663_10334631 | 3300025916 | Bacteria | 1142 |
| 164 | Ga0207657_10191091 | 3300025919 | Unclassified | 1652 |
| 165 | Ga0207650_10154205 | 3300025925 | Bacteria | 1815 |
| 166 | Ga0207667_10002206 | 3300025949 | Bacteria | 24442 |
| 167 | Ga0207667_10013312 | 3300025949 | Bacteria | 9421 |
| 168 | Ga0207640_10171044 | 3300025981 | Bacteria | 1619 |
| 169 | Ga0207658_10107270 | 3300025986 | Bacteria | 2201 |
| 170 | Ga0207639_10046058 | 3300026041 | Unclassified | 3289 |
| 171 | Ga0207639_10051269 | 3300026041 | Bacteria | 3138 |
| 172 | Ga0207639_10192498 | 3300026041 | Bacteria | 1743 |
| 173 | Ga0207678_10080624 | 3300026067 | Bacteria | 2786 |
| 174 | Ga0207702_10054319 | 3300026078 | Bacteria | 3394 |
| 175 | Ga0207702_10448861 | 3300026078 | Bacteria | 1251 |
| 176 | Ga0207702_10450707 | 3300026078 | Bacteria | 1248 |
| 177 | Ga0207648_10335032 | 3300026089 | Unclassified | 1362 |
| 178 | Ga0207675_100149536 | 3300026118 | Unclassified | 2222 |
| 179 | Ga0207698_10087867 | 3300026142 | Unclassified | 2533 |
| 180 | Ga0207698_10198306 | 3300026142 | Bacteria | 1795 |
| 181 | Ga0207698_10218403 | 3300026142 | Bacteria | 1721 |
| 182 | Ga0268266_10025811 | 3300028379 | Bacteria | 4999 |
| 183 | Ga0268264_10010451 | 3300028381 | Bacteria | 7677 |
| 184 | Ga0307515_10173485 | 3300028794 | Bacteria | 2137 |
| 185 | Ga0307511_10000420 | 3300030521 | Bacteria | 45290 |
| 186 | Ga0307408_100466672 | 3300031548 | Bacteria | 1098 |
| 187 | Ga0307516_10005114 | 3300031730 | Bacteria | 15842 |
| 188 | Ga0307406_10167107 | 3300031901 | Bacteria | 1588 |
| 189 | Ga0307416_100218429 | 3300032002 | Bacteria | 1826 |
| 190 | Ga0395899_0000796 | 3300037312 | Bacteria | 30874 |
| 191 | Ga0395905_0312937 | 3300037471 | Bacteria | 1459 |
| 192 | Ga0395901_0795898 | 3300038443 | Bacteria | 935 |
| 193 | Ga0466969_0019491 | 3300044656 | Bacteria | 3525 |
| 194 | Ga0466969_0047047 | 3300044656 | Bacteria | 2136 |
| 195 | Ga0466972_0001259 | 3300044658 | Bacteria | 12205 |
| 196 | Ga0466966_0000294 | 3300044684 | Bacteria | 32748 |
| 197 | Ga0466961_0256571 | 3300044693 | Bacteria | 1073 |
| 198 | Ga0466964_0108574 | 3300044706 | Unclassified | 1234 |
| 199 | Ga0466968_0032946 | 3300044735 | Bacteria | 2157 |
| 200 | Ga0466959_0000025 | 3300045049 | Bacteria | 120128 |
| 201 | Ga0466959_0018157 | 3300045049 | Bacteria | 5162 |
| 202 | Ga0466959_0147268 | 3300045049 | Unclassified | 1661 |
| 203 | Ga0495638_0000006 | 3300046460 | Bacteria | 668846 |
| 204 | Ga0495638_0029060 | 3300046460 | Bacteria | 3565 |
| 205 | Ga0495650_0000132 | 3300046471 | Bacteria | 174226 |
| 206 | Ga0495616_0001663 | 3300046513 | Bacteria | 15207 |
| 207 | Ga0495648_0012768 | 3300046524 | Bacteria | 6240 |
| 208 | Ga0495648_0014693 | 3300046524 | Bacteria | 5716 |
| 209 | Ga0495652_0035973 | 3300046529 | Bacteria | 4308 |
| 210 | Ga0495652_0275775 | 3300046529 | Bacteria | 1234 |
| 211 | Ga0495609_0049313 | 3300046538 | Bacteria | 1879 |
| 212 | Ga0495633_0003722 | 3300046558 | Bacteria | 10044 |
| 213 | Ga0495625_0000036 | 3300046660 | Bacteria | 221680 |
| 214 | Ga0495625_0000634 | 3300046660 | Bacteria | 50477 |
| 215 | Ga0495625_0076025 | 3300046660 | Bacteria | 2349 |
| 216 | Ga0495661_0036089 | 3300046665 | Bacteria | 3097 |
| 217 | Ga0495661_0091557 | 3300046665 | Bacteria | 1729 |
| 218 | Ga0495649_0000017 | 3300046694 | Bacteria | 221685 |
| 219 | Ga0495649_0056885 | 3300046694 | Bacteria | 2110 |
| 220 | Ga0496122_0009473 | 3300048925 | Bacteria | 10257 |
| 221 | Ga0496123_0005720 | 3300048926 | Bacteria | 12387 |
| 222 | Ga0501257_023298 | 3300049686 | Bacteria | 1468 |
| 223 | nmdc:mga0k408_543_c1 | 3300050493 | Bacteria | 7637 |
| 224 | nmdc:mga0k408_80452_c1 | 3300050493 | Bacteria | 1907 |
| 225 | nmdc:mga0qj67_52416_c1 | 3300050509 | Bacteria | 3229 |
| 226 | nmdc:mga06r32_30913_c1 | 3300050510 | Bacteria | 5025 |
| 227 | Ga0500578_0000312 | 3300053086 | Bacteria | 59640 |
| 228 | Ga0500578_0041654 | 3300053086 | Bacteria | 2949 |
| 229 | Ga0500644_0028606 | 3300053088 | Bacteria | 1745 |
| 230 | Ga0500646_0025502 | 3300053090 | Bacteria | 1597 |
| 231 | Ga0500583_0000017 | 3300053092 | Bacteria | 141647 |
| 232 | Ga0500583_0000261 | 3300053092 | Bacteria | 18792 |
| 233 | Ga0500583_0022354 | 3300053092 | Unclassified | 2647 |
| 234 | Ga0500651_0042308 | 3300053093 | Bacteria | 2870 |
| 235 | Ga0500650_0023857 | 3300053098 | Bacteria | 2722 |
| 236 | Ga0500557_069165 | 3300053105 | Bacteria | 1156 |
| 237 | Ga0500562_029502 | 3300053108 | Bacteria | 1443 |
| 238 | Ga0500569_000103 | 3300053109 | Bacteria | 13276 |
| 239 | Ga0500618_000061 | 3300053125 | Bacteria | 96180 |
| 240 | Ga0500658_0001696 | 3300053134 | Bacteria | 8727 |
| 241 | Ga0500568_0018097 | 3300053139 | Bacteria | 3093 |
| 242 | Ga0500577_0002367 | 3300053142 | Bacteria | 4811 |
| 243 | Ga0500588_0008872 | 3300053146 | Bacteria | 2368 |
| 244 | Ga0500616_0000044 | 3300053153 | Bacteria | 339611 |
| 245 | Ga0500616_0041695 | 3300053153 | Bacteria | 2461 |
| 246 | Ga0500622_0009548 | 3300053156 | Bacteria | 5363 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005614 | Ga0068856_100005216 | Ga0068856_1000052163 | 259 |
| 2 | 3300053125 | Ga0500618_000061 | Ga0500618_000061_21_821 | 259 |
| 3 | 3300013306 | Ga0163162_10003648 | Ga0163162_100036483 | 267 |
| 4 | 3300002738 | JGI25154J39366_1000004 | JGI25154J39366_1000004159 | 268 |
| 5 | 3300002741 | JGI25157J39369_1002034 | JGI25157J39369_10020343 | 268 |
| 6 | 3300003215 | JGI25153J46596_10001654 | JGI25153J46596_100016548 | 268 |
| 7 | 3300003354 | JGI25160J50197_1005498 | JGI25160J50197_10054983 | 268 |
| 8 | 3300005262 | Ga0065165_1051262 | Ga0065165_10512622 | 268 |
| 9 | 3300005578 | Ga0068854_100219020 | Ga0068854_1002190201 | 268 |
| 10 | 3300009093 | Ga0105240_10251996 | Ga0105240_102519962 | 268 |
| 11 | 3300009545 | Ga0105237_10181880 | Ga0105237_101818803 | 268 |
| 12 | 3300010375 | Ga0105239_10012971 | Ga0105239_100129714 | 268 |
| 13 | 3300025208 | Ga0209436_104126 | Ga0209436_1041262 | 268 |
| 14 | 3300025246 | Ga0209646_1000025 | Ga0209646_1000025178 | 268 |
| 15 | 3300025250 | Ga0209026_1001631 | Ga0209026_10016314 | 268 |
| 16 | 3300025284 | Ga0209130_1003813 | Ga0209130_10038135 | 268 |
| 17 | 3300025297 | Ga0209758_1020346 | Ga0209758_10203464 | 268 |
| 18 | 3300025298 | Ga0209050_1001552 | Ga0209050_100155211 | 268 |
| 19 | 3300025302 | Ga0207426_1000261 | Ga0207426_100026158 | 268 |
| 20 | 3300025302 | Ga0207426_1000288 | Ga0207426_100028875 | 268 |
| 21 | 3300025914 | Ga0207671_10002174 | Ga0207671_100021743 | 268 |
| 22 | 3300025914 | Ga0207671_10004994 | Ga0207671_100049949 | 268 |
| 23 | 3300025981 | Ga0207640_10171044 | Ga0207640_101710442 | 268 |
| 24 | 3300005981 | Ga0081538_10024605 | Ga0081538_100246053 | 273 |
| 25 | 3300005981 | Ga0081538_10026389 | Ga0081538_100263893 | 273 |
| 26 | 3300005981 | Ga0081538_10051852 | Ga0081538_100518522 | 273 |
| 27 | 3300005981 | Ga0081538_10081431 | Ga0081538_100814312 | 273 |
| 28 | 3300006846 | Ga0075430_100058978 | Ga0075430_1000589783 | 273 |
| 29 | 3300006847 | Ga0075431_100067520 | Ga0075431_1000675202 | 273 |
| 30 | 3300031548 | Ga0307408_100466672 | Ga0307408_1004666721 | 273 |
| 31 | 3300031901 | Ga0307406_10167107 | Ga0307406_101671073 | 273 |
| 32 | 3300032002 | Ga0307416_100218429 | Ga0307416_1002184292 | 273 |
| 33 | 3300050509 | nmdc:mga0qj67_52416_c1 | nmdc:mga0qj67_52416_c1_1778_2605 | 273 |
| 34 | 3300050510 | nmdc:mga06r32_30913_c1 | nmdc:mga06r32_30913_c1_3574_4401 | 273 |
| 35 | 3300013296 | Ga0157374_10000009 | Ga0157374_1000000965 | 274 |
| 36 | 3300014969 | Ga0157376_10001573 | Ga0157376_100015739 | 274 |
| 37 | iso_pu_bacteria | 2738541283 | 2738758708 | 274 |
| 38 | iso_pu_bacteria | 2818991460 | 2819679254 | 274 |
| 39 | iso_pu_bacteria | 2896085136 | 2896088404 | 274 |
| 40 | iso_pu_bacteria | 2929177148 | 2929182101 | 274 |
| 41 | iso_pu_bacteria | 2929921140 | 2929921346 | 274 |
| 42 | iso_pu_bacteria | 2945977869 | 2945978030 | 274 |
| 43 | iso_pu_bacteria | 2946013367 | 2946016116 | 274 |
| 44 | 3300046460 | Ga0495638_0029060 | Ga0495638_0029060_2192_3019 | 275 |
| 45 | 3300046524 | Ga0495648_0012768 | Ga0495648_0012768_1933_2760 | 275 |
| 46 | 3300053092 | Ga0500583_0022354 | Ga0500583_0022354_278_1105 | 275 |
| 47 | 3300053156 | Ga0500622_0009548 | Ga0500622_0009548_3521_4348 | 275 |
| 48 | 3300009093 | Ga0105240_10013372 | Ga0105240_100133724 | 276 |
| 49 | 3300009551 | Ga0105238_10057174 | Ga0105238_100571743 | 276 |
| 50 | 3300010375 | Ga0105239_10000097 | Ga0105239_1000009768 | 276 |
| 51 | 3300025913 | Ga0207695_10000077 | Ga0207695_10000077167 | 276 |
| 52 | 3300025986 | Ga0207658_10107270 | Ga0207658_101072704 | 276 |
| 53 | 3300026041 | Ga0207639_10051269 | Ga0207639_100512692 | 276 |
| 54 | 3300005577 | Ga0068857_100151693 | Ga0068857_1001516932 | 277 |
| 55 | 3300005614 | Ga0068856_100325214 | Ga0068856_1003252142 | 277 |
| 56 | 3300009093 | Ga0105240_10604765 | Ga0105240_106047651 | 277 |
| 57 | 3300009174 | Ga0105241_10033120 | Ga0105241_100331203 | 277 |
| 58 | 3300010375 | Ga0105239_10001356 | Ga0105239_1000135611 | 277 |
| 59 | 3300013102 | Ga0157371_10091752 | Ga0157371_100917522 | 277 |
| 60 | 3300013105 | Ga0157369_10571564 | Ga0157369_105715641 | 277 |
| 61 | 3300013307 | Ga0157372_10450472 | Ga0157372_104504722 | 277 |
| 62 | 3300025949 | Ga0207667_10013312 | Ga0207667_100133125 | 277 |
| 63 | 3300026078 | Ga0207702_10450707 | Ga0207702_104507072 | 277 |
| 64 | 3300028794 | Ga0307515_10173485 | Ga0307515_101734852 | 277 |
| 65 | 3300044656 | Ga0466969_0047047 | Ga0466969_0047047_513_1352 | 277 |
| 66 | 3300044684 | Ga0466966_0000294 | Ga0466966_0000294_13126_13965 | 277 |
| 67 | 3300045049 | Ga0466959_0000025 | Ga0466959_0000025_4540_5379 | 277 |
| 68 | 3300053092 | Ga0500583_0000017 | Ga0500583_0000017_39627_40481 | 277 |
| 69 | 3300053105 | Ga0500557_069165 | Ga0500557_069165_71_925 | 277 |
| 70 | 3300001979 | JGI24740J21852_10002670 | JGI24740J21852_100026705 | 278 |
| 71 | 3300001989 | JGI24739J22299_10016913 | JGI24739J22299_100169132 | 278 |
| 72 | 3300003215 | JGI25153J46596_10025444 | JGI25153J46596_100254442 | 278 |
| 73 | 3300003316 | rootH1_10062154 | rootH1_100621542 | 278 |
| 74 | 3300003320 | rootH2_10010336 | rootH2_100103365 | 278 |
| 75 | 3300003320 | rootH2_10193910 | rootH2_101939106 | 278 |
| 76 | 3300003322 | rootL2_10095509 | rootL2_100955093 | 278 |
| 77 | 3300003322 | rootL2_10150691 | rootL2_101506912 | 278 |
| 78 | 3300003323 | rootH1_10003031 | rootH1_1000303154 | 278 |
| 79 | 3300003323 | rootH1_10063931 | rootH1_100639317 | 278 |
| 80 | 3300003323 | rootH1_10095515 | rootH1_100955152 | 278 |
| 81 | 3300003771 | Ga0055526_1002038 | Ga0055526_10020385 | 278 |
| 82 | 3300003771 | Ga0055526_1004591 | Ga0055526_10045914 | 278 |
| 83 | 3300003790 | Ga0055528_1000232 | Ga0055528_100023231 | 278 |
| 84 | 3300003791 | Ga0055530_10002196 | Ga0055530_100021965 | 278 |
| 85 | 3300003791 | Ga0055530_10002268 | Ga0055530_100022688 | 278 |
| 86 | 3300003791 | Ga0055530_10004531 | Ga0055530_100045314 | 278 |
| 87 | 3300003794 | Ga0055531_10000118 | Ga0055531_1000011875 | 278 |
| 88 | 3300003794 | Ga0055531_10023537 | Ga0055531_100235373 | 278 |
| 89 | 3300005262 | Ga0065165_1000010 | Ga0065165_100001094 | 278 |
| 90 | 3300005331 | Ga0070670_100067908 | Ga0070670_1000679083 | 278 |
| 91 | 3300005335 | Ga0070666_10147004 | Ga0070666_101470042 | 278 |
| 92 | 3300005455 | Ga0070663_100013727 | Ga0070663_1000137272 | 278 |
| 93 | 3300005539 | Ga0068853_100013768 | Ga0068853_1000137685 | 278 |
| 94 | 3300005548 | Ga0070665_100001763 | Ga0070665_10000176314 | 278 |
| 95 | 3300005563 | Ga0068855_100089395 | Ga0068855_1000893952 | 278 |
| 96 | 3300005563 | Ga0068855_100207894 | Ga0068855_1002078942 | 278 |
| 97 | 3300005578 | Ga0068854_100028781 | Ga0068854_1000287814 | 278 |
| 98 | 3300005614 | Ga0068856_100049731 | Ga0068856_1000497313 | 278 |
| 99 | 3300005614 | Ga0068856_100100142 | Ga0068856_1001001422 | 278 |
| 100 | 3300005614 | Ga0068856_100496589 | Ga0068856_1004965891 | 278 |
| 101 | 3300005616 | Ga0068852_100051339 | Ga0068852_1000513394 | 278 |
| 102 | 3300005616 | Ga0068852_100082364 | Ga0068852_1000823644 | 278 |
| 103 | 3300005618 | Ga0068864_100135624 | Ga0068864_1001356242 | 278 |
| 104 | 3300005719 | Ga0068861_100296845 | Ga0068861_1002968452 | 278 |
| 105 | 3300006195 | Ga0075366_10004415 | Ga0075366_100044159 | 278 |
| 106 | 3300006195 | Ga0075366_10267887 | Ga0075366_102678872 | 278 |
| 107 | 3300006237 | Ga0097621_100055015 | Ga0097621_1000550152 | 278 |
| 108 | 3300006358 | Ga0068871_100204514 | Ga0068871_1002045142 | 278 |
| 109 | 3300009093 | Ga0105240_10000020 | Ga0105240_1000002039 | 278 |
| 110 | 3300009093 | Ga0105240_10001009 | Ga0105240_1000100942 | 278 |
| 111 | 3300009093 | Ga0105240_10001179 | Ga0105240_1000117941 | 278 |
| 112 | 3300009093 | Ga0105240_10004092 | Ga0105240_1000409212 | 278 |
| 113 | 3300009093 | Ga0105240_10006693 | Ga0105240_100066938 | 278 |
| 114 | 3300009093 | Ga0105240_10017859 | Ga0105240_100178594 | 278 |
| 115 | 3300009093 | Ga0105240_10092196 | Ga0105240_100921963 | 278 |
| 116 | 3300009093 | Ga0105240_10093631 | Ga0105240_100936313 | 278 |
| 117 | 3300009093 | Ga0105240_10133527 | Ga0105240_101335273 | 278 |
| 118 | 3300009174 | Ga0105241_10050818 | Ga0105241_100508184 | 278 |
| 119 | 3300009174 | Ga0105241_10100613 | Ga0105241_101006133 | 278 |
| 120 | 3300009545 | Ga0105237_10001119 | Ga0105237_1000111919 | 278 |
| 121 | 3300009545 | Ga0105237_10001860 | Ga0105237_1000186018 | 278 |
| 122 | 3300009545 | Ga0105237_10002300 | Ga0105237_1000230017 | 278 |
| 123 | 3300009545 | Ga0105237_10006321 | Ga0105237_100063218 | 278 |
| 124 | 3300009545 | Ga0105237_10019023 | Ga0105237_100190235 | 278 |
| 125 | 3300009545 | Ga0105237_10108793 | Ga0105237_101087933 | 278 |
| 126 | 3300009545 | Ga0105237_10522217 | Ga0105237_105222172 | 278 |
| 127 | 3300009551 | Ga0105238_10017836 | Ga0105238_100178364 | 278 |
| 128 | 3300009551 | Ga0105238_10033626 | Ga0105238_100336265 | 278 |
| 129 | 3300010375 | Ga0105239_10000064 | Ga0105239_1000006476 | 278 |
| 130 | 3300010375 | Ga0105239_10000786 | Ga0105239_1000078637 | 278 |
| 131 | 3300010375 | Ga0105239_10001142 | Ga0105239_100011426 | 278 |
| 132 | 3300010375 | Ga0105239_10003965 | Ga0105239_100039654 | 278 |
| 133 | 3300010375 | Ga0105239_10010291 | Ga0105239_100102912 | 278 |
| 134 | 3300010375 | Ga0105239_10018710 | Ga0105239_100187105 | 278 |
| 135 | 3300010375 | Ga0105239_10165791 | Ga0105239_101657912 | 278 |
| 136 | 3300010375 | Ga0105239_10187945 | Ga0105239_101879452 | 278 |
| 137 | 3300010375 | Ga0105239_10367947 | Ga0105239_103679472 | 278 |
| 138 | 3300013100 | Ga0157373_10063811 | Ga0157373_100638113 | 278 |
| 139 | 3300013102 | Ga0157371_10005170 | Ga0157371_1000517010 | 278 |
| 140 | 3300013104 | Ga0157370_10018429 | Ga0157370_100184296 | 278 |
| 141 | 3300013104 | Ga0157370_10150132 | Ga0157370_101501322 | 278 |
| 142 | 3300013104 | Ga0157370_10185739 | Ga0157370_101857393 | 278 |
| 143 | 3300013105 | Ga0157369_10001695 | Ga0157369_1000169524 | 278 |
| 144 | 3300013105 | Ga0157369_10021216 | Ga0157369_100212164 | 278 |
| 145 | 3300013306 | Ga0163162_10019924 | Ga0163162_100199244 | 278 |
| 146 | 3300013307 | Ga0157372_10000011 | Ga0157372_10000011112 | 278 |
| 147 | 3300013307 | Ga0157372_10001559 | Ga0157372_1000155918 | 278 |
| 148 | 3300013307 | Ga0157372_10092443 | Ga0157372_100924431 | 278 |
| 149 | 3300014497 | Ga0182008_10004356 | Ga0182008_100043564 | 278 |
| 150 | 3300014969 | Ga0157376_10044935 | Ga0157376_100449352 | 278 |
| 151 | 3300017792 | Ga0163161_10001139 | Ga0163161_100011392 | 278 |
| 152 | 3300025272 | Ga0209455_1001774 | Ga0209455_10017743 | 278 |
| 153 | 3300025273 | Ga0209673_1000082 | Ga0209673_100008269 | 278 |
| 154 | 3300025273 | Ga0209673_1024570 | Ga0209673_10245702 | 278 |
| 155 | 3300025295 | Ga0209564_1000938 | Ga0209564_100093825 | 278 |
| 156 | 3300025295 | Ga0209564_1002571 | Ga0209564_10025715 | 278 |
| 157 | 3300025297 | Ga0209758_1003375 | Ga0209758_10033756 | 278 |
| 158 | 3300025297 | Ga0209758_1004606 | Ga0209758_10046063 | 278 |
| 159 | 3300025298 | Ga0209050_1003308 | Ga0209050_10033087 | 278 |
| 160 | 3300025298 | Ga0209050_1003884 | Ga0209050_10038849 | 278 |
| 161 | 3300025298 | Ga0209050_1006294 | Ga0209050_10062946 | 278 |
| 162 | 3300025302 | Ga0207426_1001628 | Ga0207426_10016282 | 278 |
| 163 | 3300025302 | Ga0207426_1005220 | Ga0207426_10052202 | 278 |
| 164 | 3300025302 | Ga0207426_1017719 | Ga0207426_10177193 | 278 |
| 165 | 3300025304 | Ga0209257_1000007 | Ga0209257_1000007115 | 278 |
| 166 | 3300025304 | Ga0209257_1003874 | Ga0209257_10038746 | 278 |
| 167 | 3300025899 | Ga0207642_10286184 | Ga0207642_102861841 | 278 |
| 168 | 3300025903 | Ga0207680_10141195 | Ga0207680_101411952 | 278 |
| 169 | 3300025904 | Ga0207647_10001704 | Ga0207647_100017045 | 278 |
| 170 | 3300025904 | Ga0207647_10010254 | Ga0207647_100102544 | 278 |
| 171 | 3300025911 | Ga0207654_10072369 | Ga0207654_100723692 | 278 |
| 172 | 3300025911 | Ga0207654_10101024 | Ga0207654_101010242 | 278 |
| 173 | 3300025913 | Ga0207695_10000020 | Ga0207695_10000020487 | 278 |
| 174 | 3300025913 | Ga0207695_10000361 | Ga0207695_1000036182 | 278 |
| 175 | 3300025913 | Ga0207695_10000431 | Ga0207695_100004318 | 278 |
| 176 | 3300025913 | Ga0207695_10005425 | Ga0207695_100054258 | 278 |
| 177 | 3300025913 | Ga0207695_10028129 | Ga0207695_100281295 | 278 |
| 178 | 3300025913 | Ga0207695_10055476 | Ga0207695_100554762 | 278 |
| 179 | 3300025913 | Ga0207695_10059971 | Ga0207695_100599713 | 278 |
| 180 | 3300025913 | Ga0207695_10085321 | Ga0207695_100853212 | 278 |
| 181 | 3300025913 | Ga0207695_10088172 | Ga0207695_100881721 | 278 |
| 182 | 3300025913 | Ga0207695_10132515 | Ga0207695_101325152 | 278 |
| 183 | 3300025913 | Ga0207695_10194422 | Ga0207695_101944222 | 278 |
| 184 | 3300025914 | Ga0207671_10000438 | Ga0207671_1000043849 | 278 |
| 185 | 3300025914 | Ga0207671_10001278 | Ga0207671_1000127813 | 278 |
| 186 | 3300025914 | Ga0207671_10004449 | Ga0207671_100044498 | 278 |
| 187 | 3300025914 | Ga0207671_10004514 | Ga0207671_100045147 | 278 |
| 188 | 3300025914 | Ga0207671_10036223 | Ga0207671_100362232 | 278 |
| 189 | 3300025914 | Ga0207671_10053926 | Ga0207671_100539264 | 278 |
| 190 | 3300025914 | Ga0207671_10058620 | Ga0207671_100586201 | 278 |
| 191 | 3300025916 | Ga0207663_10334631 | Ga0207663_103346312 | 278 |
| 192 | 3300025919 | Ga0207657_10191091 | Ga0207657_101910912 | 278 |
| 193 | 3300025925 | Ga0207650_10154205 | Ga0207650_101542052 | 278 |
| 194 | 3300025949 | Ga0207667_10002206 | Ga0207667_100022064 | 278 |
| 195 | 3300026041 | Ga0207639_10046058 | Ga0207639_100460582 | 278 |
| 196 | 3300026041 | Ga0207639_10192498 | Ga0207639_101924982 | 278 |
| 197 | 3300026067 | Ga0207678_10080624 | Ga0207678_100806243 | 278 |
| 198 | 3300026078 | Ga0207702_10054319 | Ga0207702_100543193 | 278 |
| 199 | 3300026078 | Ga0207702_10448861 | Ga0207702_104488611 | 278 |
| 200 | 3300026089 | Ga0207648_10335032 | Ga0207648_103350322 | 278 |
| 201 | 3300026118 | Ga0207675_100149536 | Ga0207675_1001495363 | 278 |
| 202 | 3300026142 | Ga0207698_10087867 | Ga0207698_100878671 | 278 |
| 203 | 3300026142 | Ga0207698_10198306 | Ga0207698_101983062 | 278 |
| 204 | 3300026142 | Ga0207698_10218403 | Ga0207698_102184032 | 278 |
| 205 | 3300028379 | Ga0268266_10025811 | Ga0268266_100258114 | 278 |
| 206 | 3300028381 | Ga0268264_10010451 | Ga0268264_100104514 | 278 |
| 207 | 3300030521 | Ga0307511_10000420 | Ga0307511_1000042048 | 278 |
| 208 | 3300031730 | Ga0307516_10005114 | Ga0307516_1000511410 | 278 |
| 209 | 3300037312 | Ga0395899_0000796 | Ga0395899_0000796_4859_5716 | 278 |
| 210 | 3300037471 | Ga0395905_0312937 | Ga0395905_0312937_328_1185 | 278 |
| 211 | 3300038443 | Ga0395901_0795898 | Ga0395901_0795898_39_896 | 278 |
| 212 | 3300044656 | Ga0466969_0019491 | Ga0466969_0019491_1909_2766 | 278 |
| 213 | 3300044658 | Ga0466972_0001259 | Ga0466972_0001259_9165_10013 | 278 |
| 214 | 3300044693 | Ga0466961_0256571 | Ga0466961_0256571_99_956 | 278 |
| 215 | 3300044706 | Ga0466964_0108574 | Ga0466964_0108574_323_1180 | 278 |
| 216 | 3300044735 | Ga0466968_0032946 | Ga0466968_0032946_321_1169 | 278 |
| 217 | 3300045049 | Ga0466959_0018157 | Ga0466959_0018157_3926_4768 | 278 |
| 218 | 3300045049 | Ga0466959_0147268 | Ga0466959_0147268_506_1363 | 278 |
| 219 | 3300046460 | Ga0495638_0000006 | Ga0495638_0000006_326620_327477 | 278 |
| 220 | 3300046471 | Ga0495650_0000132 | Ga0495650_0000132_112877_113731 | 278 |
| 221 | 3300046513 | Ga0495616_0001663 | Ga0495616_0001663_7210_8064 | 278 |
| 222 | 3300046524 | Ga0495648_0014693 | Ga0495648_0014693_475_1329 | 278 |
| 223 | 3300046529 | Ga0495652_0035973 | Ga0495652_0035973_409_1266 | 278 |
| 224 | 3300046529 | Ga0495652_0275775 | Ga0495652_0275775_363_1220 | 278 |
| 225 | 3300046538 | Ga0495609_0049313 | Ga0495609_0049313_422_1276 | 278 |
| 226 | 3300046558 | Ga0495633_0003722 | Ga0495633_0003722_302_1165 | 278 |
| 227 | 3300046660 | Ga0495625_0000036 | Ga0495625_0000036_84277_85131 | 278 |
| 228 | 3300046660 | Ga0495625_0000634 | Ga0495625_0000634_36230_37087 | 278 |
| 229 | 3300046660 | Ga0495625_0076025 | Ga0495625_0076025_1146_2003 | 278 |
| 230 | 3300046665 | Ga0495661_0036089 | Ga0495661_0036089_1554_2408 | 278 |
| 231 | 3300046665 | Ga0495661_0091557 | Ga0495661_0091557_150_1013 | 278 |
| 232 | 3300046694 | Ga0495649_0000017 | Ga0495649_0000017_136585_137439 | 278 |
| 233 | 3300046694 | Ga0495649_0056885 | Ga0495649_0056885_503_1360 | 278 |
| 234 | 3300048925 | Ga0496122_0009473 | Ga0496122_0009473_1461_2315 | 278 |
| 235 | 3300048926 | Ga0496123_0005720 | Ga0496123_0005720_976_1830 | 278 |
| 236 | 3300049686 | Ga0501257_023298 | Ga0501257_023298_62_919 | 278 |
| 237 | 3300050493 | nmdc:mga0k408_543_c1 | nmdc:mga0k408_543_c1_1255_2112 | 278 |
| 238 | 3300050493 | nmdc:mga0k408_80452_c1 | nmdc:mga0k408_80452_c1_100_957 | 278 |
| 239 | 3300053086 | Ga0500578_0000312 | Ga0500578_0000312_13139_14086 | 278 |
| 240 | 3300053086 | Ga0500578_0041654 | Ga0500578_0041654_102_950 | 278 |
| 241 | 3300053088 | Ga0500644_0028606 | Ga0500644_0028606_693_1550 | 278 |
| 242 | 3300053090 | Ga0500646_0025502 | Ga0500646_0025502_166_1023 | 278 |
| 243 | 3300053092 | Ga0500583_0000261 | Ga0500583_0000261_13829_14686 | 278 |
| 244 | 3300053093 | Ga0500651_0042308 | Ga0500651_0042308_1234_2091 | 278 |
| 245 | 3300053098 | Ga0500650_0023857 | Ga0500650_0023857_1223_2080 | 278 |
| 246 | 3300053108 | Ga0500562_029502 | Ga0500562_029502_96_968 | 278 |
| 247 | 3300053109 | Ga0500569_000103 | Ga0500569_000103_6438_7295 | 278 |
| 248 | 3300053134 | Ga0500658_0001696 | Ga0500658_0001696_6916_7773 | 278 |
| 249 | 3300053139 | Ga0500568_0018097 | Ga0500568_0018097_913_1770 | 278 |
| 250 | 3300053142 | Ga0500577_0002367 | Ga0500577_0002367_1194_2051 | 278 |
| 251 | 3300053146 | Ga0500588_0008872 | Ga0500588_0008872_942_1799 | 278 |
| 252 | 3300053153 | Ga0500616_0000044 | Ga0500616_0000044_101700_102557 | 278 |
| 253 | 3300053153 | Ga0500616_0041695 | Ga0500616_0041695_1372_2229 | 278 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5fgm-assembly1.cif.gz_A | streptomyces coelicolor sigr region 4 | 0.9644 | 133 | 188 |
| 3vfz-assembly3.cif.gz_A | crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis | 0.9587 | 132 | 185 |
| 3vep-assembly4.cif.gz_H | crystal structure of sigd4 in complex with its negative regulator rsda | 0.9541 | 132 | 185 |
| 2o8x-assembly1.cif.gz_A | "crystal structure of the ""-35 element"" promoter recognition domain of mycobacterium tuberculosis sigc" | 0.9456 | 134 | 183 |
| 6eo3-assembly1.cif.gz_B | conformational dynamism for dna interaction in salmonella typhimurium rcsb response regulator. s207c p212121 | 0.9425 | 140 | 183 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3t0yA02 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9767 | 144 | 185 | 1.10.10.10 |
| 4cxfA02 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9593 | 132 | 187 | 1.10.10.10 |
| 2o8xA00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9456 | 134 | 183 | 1.10.10.10 |
| af_P23484_80_166_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9425 | 132 | 182 | 1.10.10.10 |
| 3vfzA00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9365 | 132 | 185 | 1.10.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1M6I0B5-F1-model_v4 | RNA polymerase sigma-70 factor, ECF subfamily | 0.9371 | 16 | 273 |
GO:0003677
GO:0006352 GO:0016987 |
| AF-A0A521GJN2-F1-model_v4 | RNA polymerase sigma factor | 0.9249 | 3 | 273 |
GO:0006352
GO:0016987 |
| AF-A0A3M0GPA6-F1-model_v4 | RNA polymerase sigma factor | 0.9243 | 1 | 275 |
GO:0006352
GO:0016987 |
| AF-A0A5C8V9F9-F1-model_v4 | Sigma-70 family RNA polymerase sigma factor | 0.9217 | 15 | 269 |
GO:0006352
GO:0016987 |
| AF-A1ZLJ3-F1-model_v4 | RNA polymerase sigma-70 region 2 domain-containing protein | 0.9185 | 14 | 264 |
GO:0006352
GO:0016987 |
Predicted Structure (AlphaFold2)
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