F363858

General Info

Members Datasets Scaffolds Average Seq Length
253 133 506 198

Family's Representative Sequence

Representative Sequence 3300005444|Ga0070694_100036102|Ga0070694_1000361024
Length 230
Sequence MVTRVTTFACLPQSWQNLPSYPASMPTPIGHALAGVAAAWAVDLVPGDRLSRIAHTSASWYQRAGNGLTLICAGLAVAPDVDLLLLPFYPQSHRTVTHSVGAALVVGMLAGAVAARTRRSAAGVARVATMCVTAYATHLLLDWLGADNYPPRGIQLLWPFSHAWFISDLDLFPQTARRQIFTAPIVRLNLVAIAQESAILLPILVALWLVRVKALAGLATELPRSDHAPQ

Samples

Sample ID Description Type Environment
1 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
108 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
109 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
110 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
111 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
124 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.98
Rhizosphere 98.02
Stem 0
Stem Tuber 0
Unclassified 1.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070694_100036102 3300005444 Bacteria 3272
2 Ga0065712_10098849 3300005290 Bacteria 2107
3 Ga0070676_10627018 3300005328 Bacteria 778
4 Ga0070690_100215477 3300005330 Bacteria 1343
5 Ga0070690_100433142 3300005330 Bacteria 972
6 Ga0068869_100273998 3300005334 Bacteria 1355
7 Ga0070680_100577931 3300005336 Bacteria 964
8 Ga0068868_100224458 3300005338 Bacteria 1574
9 Ga0068868_100530287 3300005338 Bacteria 1035
10 Ga0070689_100464600 3300005340 Bacteria 1079
11 Ga0070691_10014713 3300005341 Bacteria 3591
12 Ga0070687_100063714 3300005343 Bacteria 1956
13 Ga0070692_10168376 3300005345 Bacteria 1261
14 Ga0070668_100090515 3300005347 Bacteria 2411
15 Ga0070669_100012768 3300005353 Bacteria 5964
16 Ga0070669_100159298 3300005353 Bacteria 1753
17 Ga0070675_100015816 3300005354 Bacteria 5973
18 Ga0070675_100562220 3300005354 Unclassified 1032
19 Ga0070671_100262853 3300005355 Bacteria 1467
20 Ga0070674_100048596 3300005356 Bacteria 2913
21 Ga0070674_100142574 3300005356 Bacteria 1800
22 Ga0070673_100052098 3300005364 Bacteria 3210
23 Ga0070673_100287207 3300005364 Bacteria 1445
24 Ga0070688_100128461 3300005365 Bacteria 1706
25 Ga0070659_101090795 3300005366 Bacteria 703
26 Ga0070667_100012498 3300005367 Bacteria 7022
27 Ga0070703_10047796 3300005406 Bacteria 1357
28 Ga0070701_10099560 3300005438 Bacteria 1608
29 Ga0070700_100003816 3300005441 Bacteria 7809
30 Ga0070694_100047641 3300005444 Bacteria 2881
31 Ga0070694_100502636 3300005444 Bacteria 965
32 Ga0070708_100115141 3300005445 Bacteria 2475
33 Ga0070708_100593919 3300005445 Bacteria 1044
34 Ga0070662_100867960 3300005457 Bacteria 769
35 Ga0070681_10617666 3300005458 Bacteria 998
36 Ga0068867_100008032 3300005459 Bacteria 7456
37 Ga0068867_100019231 3300005459 Bacteria 4866
38 Ga0068867_100222117 3300005459 Bacteria 1523
39 Ga0070707_100063578 3300005468 Bacteria 3542
40 Ga0070707_100209929 3300005468 Bacteria 1898
41 Ga0070707_100487640 3300005468 Bacteria 1194
42 Ga0070707_101172964 3300005468 Bacteria 734
43 Ga0070698_100182134 3300005471 Bacteria 2039
44 Ga0070698_100828121 3300005471 Bacteria 870
45 Ga0070699_100006296 3300005518 Bacteria 10354
46 Ga0070699_100052542 3300005518 Bacteria 3526
47 Ga0070699_100211418 3300005518 Bacteria 1727
48 Ga0070699_100485899 3300005518 Bacteria 1121
49 Ga0070699_100546768 3300005518 Bacteria 1054
50 Ga0070697_100158157 3300005536 Bacteria 1914
51 Ga0070697_100214415 3300005536 Bacteria 1640
52 Ga0070672_100021027 3300005543 Bacteria 4770
53 Ga0070672_100291945 3300005543 Bacteria 1381
54 Ga0070686_100644606 3300005544 Bacteria 839
55 Ga0070695_100002451 3300005545 Bacteria 10675
56 Ga0070695_100003146 3300005545 Bacteria 9623
57 Ga0070696_100001361 3300005546 Bacteria 15950
58 Ga0070696_100138742 3300005546 Bacteria 1775
59 Ga0070696_100322669 3300005546 Bacteria 1189
60 Ga0070696_100823750 3300005546 Bacteria 765
61 Ga0070665_100004096 3300005548 Bacteria 15330
62 Ga0070704_100006274 3300005549 Bacteria 6996
63 Ga0070704_100013822 3300005549 Bacteria 5026
64 Ga0070704_100080581 3300005549 Bacteria 2395
65 Ga0070664_101045352 3300005564 Bacteria 768
66 Ga0068854_100035812 3300005578 Bacteria 3476
67 Ga0068854_100192490 3300005578 Bacteria 1599
68 Ga0070702_100228909 3300005615 Bacteria 1248
69 Ga0068859_100174475 3300005617 Bacteria 2231
70 Ga0068859_100447389 3300005617 Bacteria 1388
71 Ga0068859_100560304 3300005617 Bacteria 1237
72 Ga0068864_100030248 3300005618 Bacteria 4589
73 Ga0068866_10028093 3300005718 Bacteria 2677
74 Ga0068861_100010358 3300005719 Bacteria 6468
75 Ga0068863_100002257 3300005841 Bacteria 19143
76 Ga0068858_100001428 3300005842 Bacteria 24559
77 Ga0068858_100580118 3300005842 Bacteria 1087
78 Ga0068860_100043116 3300005843 Bacteria 4306
79 Ga0068860_100998938 3300005843 Unclassified 855
80 Ga0068860_101057986 3300005843 Bacteria 830
81 Ga0068862_100133159 3300005844 Bacteria 2200
82 Ga0070716_100348074 3300006173 Bacteria 1048
83 Ga0097621_100205462 3300006237 Bacteria 1711
84 Ga0097621_100706505 3300006237 Bacteria 928
85 Ga0068871_100124265 3300006358 Bacteria 2182
86 Ga0068871_100328457 3300006358 Bacteria 1348
87 Ga0075428_100219847 3300006844 Bacteria 2051
88 Ga0075428_100284962 3300006844 Bacteria 1777
89 Ga0075431_100100654 3300006847 Bacteria 2982
90 Ga0075433_10232225 3300006852 Bacteria 1638
91 Ga0075433_10329270 3300006852 Bacteria 1351
92 Ga0075433_10885989 3300006852 Bacteria 779
93 Ga0075434_100000082 3300006871 Bacteria 51181
94 Ga0075434_100006312 3300006871 Bacteria 10864
95 Ga0075434_100009172 3300006871 Bacteria 9217
96 Ga0075434_100018354 3300006871 Bacteria 6757
97 Ga0075434_100394444 3300006871 Bacteria 1405
98 Ga0068865_100225033 3300006881 Bacteria 1468
99 Ga0075436_100000504 3300006914 Bacteria 25252
100 Ga0075436_100011658 3300006914 Bacteria 6031
101 Ga0075436_100103958 3300006914 Bacteria 1979
102 Ga0075436_100201306 3300006914 Bacteria 1410
103 Ga0075436_100403399 3300006914 Bacteria 991
104 Ga0097620_100174487 3300006931 Bacteria 2231
105 Ga0097620_100447351 3300006931 Bacteria 1388
106 Ga0097620_100560272 3300006931 Bacteria 1237
107 Ga0075435_100000008 3300007076 Bacteria 115376
108 Ga0075435_100000992 3300007076 Bacteria 17997
109 Ga0075435_100024447 3300007076 Bacteria 4689
110 Ga0075435_100029258 3300007076 Bacteria 4323
111 Ga0075435_100043624 3300007076 Bacteria 3591
112 Ga0075435_100301841 3300007076 Bacteria 1370
113 Ga0099794_10116728 3300007265 Bacteria 1340
114 Ga0111539_10319762 3300009094 Bacteria 1806
115 Ga0111539_10333828 3300009094 Bacteria 1765
116 Ga0111539_10525607 3300009094 Bacteria 1378
117 Ga0114129_10010644 3300009147 Bacteria 13118
118 Ga0114129_10016514 3300009147 Bacteria 10511
119 Ga0114129_10022684 3300009147 Bacteria 8903
120 Ga0114129_10045618 3300009147 Bacteria 6160
121 Ga0114129_10057559 3300009147 Bacteria 5439
122 Ga0114129_10262039 3300009147 Bacteria 2316
123 Ga0114129_10277216 3300009147 Bacteria 2241
124 Ga0105242_10220596 3300009176 Bacteria 1694
125 Ga0105248_10030840 3300009177 Bacteria 5990
126 Ga0105248_10077289 3300009177 Bacteria 3742
127 Ga0105248_10127582 3300009177 Bacteria 2870
128 Ga0105248_10381605 3300009177 Bacteria 1587
129 Ga0105248_10718243 3300009177 Bacteria 1127
130 Ga0105248_10865204 3300009177 Bacteria 1020
131 Ga0105238_10274227 3300009551 Bacteria 1667
132 Ga0105249_10523710 3300009553 Bacteria 1233
133 Ga0105249_10749590 3300009553 Bacteria 1039
134 Ga0163162_10129905 3300013306 Bacteria 2627
135 Ga0163162_10178686 3300013306 Bacteria 2248
136 Ga0157375_10089943 3300013308 Bacteria 3127
137 Ga0163163_10026610 3300014325 Bacteria 5532
138 Ga0157380_10250683 3300014326 Bacteria 1602
139 Ga0157380_10367149 3300014326 Bacteria 1353
140 Ga0157380_10602753 3300014326 Bacteria 1087
141 Ga0157380_10637005 3300014326 Bacteria 1061
142 Ga0157377_10233105 3300014745 Bacteria 1185
143 Ga0157379_10012303 3300014968 Bacteria 7474
144 Ga0207642_10034802 3300025899 Bacteria 2145
145 Ga0207680_10368241 3300025903 Bacteria 1011
146 Ga0207645_10006414 3300025907 Bacteria 8445
147 Ga0207645_10104263 3300025907 Bacteria 1831
148 Ga0207662_10104718 3300025918 Bacteria 1757
149 Ga0207662_10169507 3300025918 Bacteria 1399
150 Ga0207646_10090178 3300025922 Bacteria 2744
151 Ga0207646_10096847 3300025922 Bacteria 2643
152 Ga0207646_10490135 3300025922 Bacteria 1108
153 Ga0207681_10038356 3300025923 Bacteria 3174
154 Ga0207681_10089612 3300025923 Bacteria 2193
155 Ga0207681_10217394 3300025923 Bacteria 1476
156 Ga0207659_10251166 3300025926 Bacteria 1435
157 Ga0207687_10083315 3300025927 Bacteria 2315
158 Ga0207687_10340125 3300025927 Bacteria 1220
159 Ga0207644_10134876 3300025931 Bacteria 1894
160 Ga0207706_10070918 3300025933 Bacteria 3064
161 Ga0207706_10315312 3300025933 Bacteria 1361
162 Ga0207686_10245320 3300025934 Bacteria 1306
163 Ga0207670_10051227 3300025936 Bacteria 2771
164 Ga0207670_10689037 3300025936 Unclassified 845
165 Ga0207669_10263617 3300025937 Bacteria 1290
166 Ga0207669_10319256 3300025937 Bacteria 1188
167 Ga0207669_10621617 3300025937 Bacteria 880
168 Ga0207691_10054152 3300025940 Bacteria 3660
169 Ga0207691_10104081 3300025940 Bacteria 2530
170 Ga0207711_10035125 3300025941 Bacteria 4248
171 Ga0207711_10132386 3300025941 Bacteria 2237
172 Ga0207711_10212252 3300025941 Bacteria 1768
173 Ga0207689_10082528 3300025942 Bacteria 2643
174 Ga0207689_10172185 3300025942 Bacteria 1785
175 Ga0207651_10005091 3300025960 Bacteria 6710
176 Ga0207651_10034715 3300025960 Bacteria 3270
177 Ga0207651_10274070 3300025960 Bacteria 1391
178 Ga0207712_10210790 3300025961 Bacteria 1547
179 Ga0207668_10020587 3300025972 Bacteria 4194
180 Ga0207640_10117254 3300025981 Bacteria 1900
181 Ga0207640_10159919 3300025981 Bacteria 1665
182 Ga0207658_10049900 3300025986 Bacteria 3077
183 Ga0207703_10016799 3300026035 Bacteria 5709
184 Ga0207703_10076994 3300026035 Bacteria 2768
185 Ga0207703_10436446 3300026035 Bacteria 1221
186 Ga0207708_10001521 3300026075 Bacteria 17284
187 Ga0207641_10020561 3300026088 Bacteria 5422
188 Ga0207648_10016693 3300026089 Bacteria 6699
189 Ga0207648_10047518 3300026089 Bacteria 3762
190 Ga0207648_10120673 3300026089 Bacteria 2305
191 Ga0207648_10362520 3300026089 Bacteria 1308
192 Ga0207648_10715046 3300026089 Bacteria 929
193 Ga0207676_10139265 3300026095 Bacteria 2075
194 Ga0207675_100010949 3300026118 Bacteria 8496
195 Ga0207675_101149217 3300026118 Unclassified 797
196 Ga0207683_10139233 3300026121 Bacteria 2186
197 Ga0207428_10011617 3300027907 Bacteria 7773
198 Ga0207428_10051340 3300027907 Bacteria 3297
199 Ga0207428_10065790 3300027907 Bacteria 2858
200 Ga0268266_10082410 3300028379 Bacteria 2806
201 Ga0268265_10064887 3300028380 Bacteria 2815
202 Ga0268265_10470137 3300028380 Bacteria 1178
203 Ga0268264_10031818 3300028381 Bacteria 4327
204 Ga0268264_10951568 3300028381 Unclassified 864
205 Ga0373961_0121549 3300035241 Bacteria 866
206 Ga0395900_0745392 3300037418 Bacteria 910
207 Ga0439435_0099141 3300042436 Bacteria 894
208 Ga0495621_0010729 3300046539 Bacteria 2814
209 Ga0495659_0297518 3300046664 Bacteria 681
210 Ga0495647_0109214 3300046681 Bacteria 1153
211 Ga0495669_0186766 3300046684 Bacteria 989
212 Ga0495670_0106883 3300046691 Bacteria 1446
213 Ga0495684_0606478 3300047471 Bacteria 738
214 Ga0496100_0858509 3300048903 Bacteria 712
215 Ga0496104_0503273 3300048907 Bacteria 1123
216 Ga0496108_0048475 3300048911 Bacteria 3552
217 Ga0496110_0492241 3300048913 Bacteria 1117
218 Ga0496112_0011580 3300048915 Bacteria 8063
219 Ga0501034_0082350 3300049571 Bacteria 3220
220 Ga0501034_0095621 3300049571 Bacteria 2967
221 Ga0501036_0458873 3300049572 Bacteria 1061
222 Ga0501047_0024437 3300049581 Bacteria 5798
223 Ga0501076_0154089 3300049592 Bacteria 1870
224 Ga0501080_0822578 3300049742 Bacteria 813
225 Ga0501035_0253680 3300049822 Bacteria 1493
226 Ga0501044_0004689 3300049823 Bacteria 15286
227 nmdc:mga05p37_19771_c1 3300050507 Bacteria 8148
228 nmdc:mga05p37_433325_c1 3300050507 Bacteria 1527
229 nmdc:mga05p37_46559_c1 3300050507 Bacteria 5333
230 nmdc:mga05p37_55144_c1 3300050507 Bacteria 4890
231 nmdc:mga09592_195275_c1 3300050508 Bacteria 1752
232 nmdc:mga08y16_169974_c1 3300050511 Bacteria 2264
233 nmdc:mga08y16_4931_c1 3300050511 Bacteria 12953
234 nmdc:mga08y16_79633_c1 3300050511 Bacteria 3415
235 nmdc:mga0n895_1194577_c1 3300050512 Bacteria 735
236 nmdc:mga0n895_141465_c1 3300050512 Bacteria 2435
237 nmdc:mga0n895_368913_c1 3300050512 Bacteria 1453
238 nmdc:mga0n895_93022_c1 3300050512 Bacteria 3019
239 nmdc:mga0n895_97892_c1 3300050512 Bacteria 2940
240 nmdc:mga0rr50_113322_c1 3300050513 Bacteria 2149
241 nmdc:mga0rr50_181274_c1 3300050513 Bacteria 1722
242 nmdc:mga0rr50_29378_c1 3300050513 Bacteria 3877
243 nmdc:mga0rr50_354150_c1 3300050513 Bacteria 1235
244 nmdc:mga0rr50_49081_c1 3300050513 Bacteria 3124
245 nmdc:mga08x19_128280_c1 3300050514 Bacteria 1704
246 nmdc:mga08x19_68040_c1 3300050514 Bacteria 2317
247 nmdc:mga08x19_7473_c1 3300050514 Bacteria 6490
248 nmdc:mga08x19_81597_c1 3300050514 Bacteria 2124
249 nmdc:mga0a205_147209_c1 3300050515 Bacteria 2256
250 nmdc:mga0a205_185321_c1 3300050515 Bacteria 1974
251 nmdc:mga0a205_69457_c2 3300050515 Bacteria 2098
252 nmdc:mga0a205_89340_c1 3300050515 Bacteria 2978
253 Ga0501084_0319756 3300054114 Bacteria 1311
254 Ga0070694_100036102
255 Ga0065712_10098849
256 Ga0070676_10627018
257 Ga0070690_100215477
258 Ga0070690_100433142
259 Ga0068869_100273998
260 Ga0070680_100577931
261 Ga0068868_100224458
262 Ga0068868_100530287
263 Ga0070689_100464600
264 Ga0070691_10014713
265 Ga0070687_100063714
266 Ga0070692_10168376
267 Ga0070668_100090515
268 Ga0070669_100012768
269 Ga0070669_100159298
270 Ga0070675_100015816
271 Ga0070675_100562220
272 Ga0070671_100262853
273 Ga0070674_100048596
274 Ga0070674_100142574
275 Ga0070673_100052098
276 Ga0070673_100287207
277 Ga0070688_100128461
278 Ga0070659_101090795
279 Ga0070667_100012498
280 Ga0070703_10047796
281 Ga0070701_10099560
282 Ga0070700_100003816
283 Ga0070694_100047641
284 Ga0070694_100502636
285 Ga0070708_100115141
286 Ga0070708_100593919
287 Ga0070662_100867960
288 Ga0070681_10617666
289 Ga0068867_100008032
290 Ga0068867_100019231
291 Ga0068867_100222117
292 Ga0070707_100063578
293 Ga0070707_100209929
294 Ga0070707_100487640
295 Ga0070707_101172964
296 Ga0070698_100182134
297 Ga0070698_100828121
298 Ga0070699_100006296
299 Ga0070699_100052542
300 Ga0070699_100211418
301 Ga0070699_100485899
302 Ga0070699_100546768
303 Ga0070697_100158157
304 Ga0070697_100214415
305 Ga0070672_100021027
306 Ga0070672_100291945
307 Ga0070686_100644606
308 Ga0070695_100002451
309 Ga0070695_100003146
310 Ga0070696_100001361
311 Ga0070696_100138742
312 Ga0070696_100322669
313 Ga0070696_100823750
314 Ga0070665_100004096
315 Ga0070704_100006274
316 Ga0070704_100013822
317 Ga0070704_100080581
318 Ga0070664_101045352
319 Ga0068854_100035812
320 Ga0068854_100192490
321 Ga0070702_100228909
322 Ga0068859_100174475
323 Ga0068859_100447389
324 Ga0068859_100560304
325 Ga0068864_100030248
326 Ga0068866_10028093
327 Ga0068861_100010358
328 Ga0068863_100002257
329 Ga0068858_100001428
330 Ga0068858_100580118
331 Ga0068860_100043116
332 Ga0068860_100998938
333 Ga0068860_101057986
334 Ga0068862_100133159
335 Ga0070716_100348074
336 Ga0097621_100205462
337 Ga0097621_100706505
338 Ga0068871_100124265
339 Ga0068871_100328457
340 Ga0075428_100219847
341 Ga0075428_100284962
342 Ga0075431_100100654
343 Ga0075433_10232225
344 Ga0075433_10329270
345 Ga0075433_10885989
346 Ga0075434_100000082
347 Ga0075434_100006312
348 Ga0075434_100009172
349 Ga0075434_100018354
350 Ga0075434_100394444
351 Ga0068865_100225033
352 Ga0075436_100000504
353 Ga0075436_100011658
354 Ga0075436_100103958
355 Ga0075436_100201306
356 Ga0075436_100403399
357 Ga0097620_100174487
358 Ga0097620_100447351
359 Ga0097620_100560272
360 Ga0075435_100000008
361 Ga0075435_100000992
362 Ga0075435_100024447
363 Ga0075435_100029258
364 Ga0075435_100043624
365 Ga0075435_100301841
366 Ga0099794_10116728
367 Ga0111539_10319762
368 Ga0111539_10333828
369 Ga0111539_10525607
370 Ga0114129_10010644
371 Ga0114129_10016514
372 Ga0114129_10022684
373 Ga0114129_10045618
374 Ga0114129_10057559
375 Ga0114129_10262039
376 Ga0114129_10277216
377 Ga0105242_10220596
378 Ga0105248_10030840
379 Ga0105248_10077289
380 Ga0105248_10127582
381 Ga0105248_10381605
382 Ga0105248_10718243
383 Ga0105248_10865204
384 Ga0105238_10274227
385 Ga0105249_10523710
386 Ga0105249_10749590
387 Ga0163162_10129905
388 Ga0163162_10178686
389 Ga0157375_10089943
390 Ga0163163_10026610
391 Ga0157380_10250683
392 Ga0157380_10367149
393 Ga0157380_10602753
394 Ga0157380_10637005
395 Ga0157377_10233105
396 Ga0157379_10012303
397 Ga0207642_10034802
398 Ga0207680_10368241
399 Ga0207645_10006414
400 Ga0207645_10104263
401 Ga0207662_10104718
402 Ga0207662_10169507
403 Ga0207646_10090178
404 Ga0207646_10096847
405 Ga0207646_10490135
406 Ga0207681_10038356
407 Ga0207681_10089612
408 Ga0207681_10217394
409 Ga0207659_10251166
410 Ga0207687_10083315
411 Ga0207687_10340125
412 Ga0207644_10134876
413 Ga0207706_10070918
414 Ga0207706_10315312
415 Ga0207686_10245320
416 Ga0207670_10051227
417 Ga0207670_10689037
418 Ga0207669_10263617
419 Ga0207669_10319256
420 Ga0207669_10621617
421 Ga0207691_10054152
422 Ga0207691_10104081
423 Ga0207711_10035125
424 Ga0207711_10132386
425 Ga0207711_10212252
426 Ga0207689_10082528
427 Ga0207689_10172185
428 Ga0207651_10005091
429 Ga0207651_10034715
430 Ga0207651_10274070
431 Ga0207712_10210790
432 Ga0207668_10020587
433 Ga0207640_10117254
434 Ga0207640_10159919
435 Ga0207658_10049900
436 Ga0207703_10016799
437 Ga0207703_10076994
438 Ga0207703_10436446
439 Ga0207708_10001521
440 Ga0207641_10020561
441 Ga0207648_10016693
442 Ga0207648_10047518
443 Ga0207648_10120673
444 Ga0207648_10362520
445 Ga0207648_10715046
446 Ga0207676_10139265
447 Ga0207675_100010949
448 Ga0207675_101149217
449 Ga0207683_10139233
450 Ga0207428_10011617
451 Ga0207428_10051340
452 Ga0207428_10065790
453 Ga0268266_10082410
454 Ga0268265_10064887
455 Ga0268265_10470137
456 Ga0268264_10031818
457 Ga0268264_10951568
458 Ga0373961_0121549
459 Ga0395900_0745392
460 Ga0439435_0099141
461 Ga0495621_0010729
462 Ga0495659_0297518
463 Ga0495647_0109214
464 Ga0495669_0186766
465 Ga0495670_0106883
466 Ga0495684_0606478
467 Ga0496100_0858509
468 Ga0496104_0503273
469 Ga0496108_0048475
470 Ga0496110_0492241
471 Ga0496112_0011580
472 Ga0501034_0082350
473 Ga0501034_0095621
474 Ga0501036_0458873
475 Ga0501047_0024437
476 Ga0501076_0154089
477 Ga0501080_0822578
478 Ga0501035_0253680
479 Ga0501044_0004689
480 nmdc:mga05p37_19771_c1
481 nmdc:mga05p37_433325_c1
482 nmdc:mga05p37_46559_c1
483 nmdc:mga05p37_55144_c1
484 nmdc:mga09592_195275_c1
485 nmdc:mga08y16_169974_c1
486 nmdc:mga08y16_4931_c1
487 nmdc:mga08y16_79633_c1
488 nmdc:mga0n895_1194577_c1
489 nmdc:mga0n895_141465_c1
490 nmdc:mga0n895_368913_c1
491 nmdc:mga0n895_93022_c1
492 nmdc:mga0n895_97892_c1
493 nmdc:mga0rr50_113322_c1
494 nmdc:mga0rr50_181274_c1
495 nmdc:mga0rr50_29378_c1
496 nmdc:mga0rr50_354150_c1
497 nmdc:mga0rr50_49081_c1
498 nmdc:mga08x19_128280_c1
499 nmdc:mga08x19_68040_c1
500 nmdc:mga08x19_7473_c1
501 nmdc:mga08x19_81597_c1
502 nmdc:mga0a205_147209_c1
503 nmdc:mga0a205_185321_c1
504 nmdc:mga0a205_69457_c2
505 nmdc:mga0a205_89340_c1
506 Ga0501084_0319756

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04307

YdjM

LexA-binding, inner membrane-associated putative hydrolase

25

219

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6qc6-assembly1.cif.gz_AK ovine respiratory complex i frc open class 1 0.381 7 119
8gym-assembly1.cif.gz_an cryo-em structure of tetrahymena thermophila respiratory mega-complex mc iv2+(i+iii2+ii)2 0.3456 4 109
6qc6-assembly1.cif.gz_AK ovine respiratory complex i frc open class 1 0.3345 7 119
4u4v-assembly1.cif.gz_A structure of a nitrate/nitrite antiporter nark in apo inward-open state 0.3326 5 180
5c65-assembly1.cif.gz_A structure of the human glucose transporter glut3 / slc2a3 0.3303 4 185
ID Description Score Start End Superfamily
1tfeA02 Mainly Alpha;Orthogonal Bundle;GTP Cyclohydrolase I; Chain A, domain 1; 0.581 72 110 1.10.286.20
1tfeA02 Mainly Alpha;Orthogonal Bundle;GTP Cyclohydrolase I; Chain A, domain 1; 0.5172 72 110 1.10.286.20
af_P9WJW9_258_425_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4266 4 186 1.20.1250.20
af_Q9ZV24_25_136_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.4188 45 106 1.10.10.1740
af_K7V2D2_6_142_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.4186 45 110 1.10.10.1740
ID Description Score Start End GO Terms
AF-A0A2V8GMX8-F1-model_v4 Metal-dependent hydrolase 0.9626 1 185 GO:0016020
AF-A0A2V8CYY7-F1-model_v4 Metal-dependent hydrolase 0.9513 1 143 GO:0016020
AF-A0A2V8CYY7-F1-model_v4 Metal-dependent hydrolase 0.9448 1 143 GO:0016020
AF-A0A1Q7ALD9-F1-model_v4 Metal-dependent hydrolase 0.938 39 188 GO:0016020
AF-A0A7W0FN11-F1-model_v4 Metal-dependent hydrolase 0.9237 46 185 GO:0016020

Map