F362803

General Info

Members Datasets Scaffolds Average Seq Length
251 195 502 401

Family's Representative Sequence

Representative Sequence 3300053098|Ga0500650_0028797|Ga0500650_0028797_357_1667
Length 436
Sequence MLRRCFDKRSAALRGVTFAWGAGRREKYSDSMLNSSDRIQTTHAGSLPRTPELIAANEAREFEADGFTFTRTEEFDRLEGAAVADLVARQKAIGITVPGDGEYGKAMSSAVDYGAWWSYSFQRVAGLSIEGSNIFSAPPVRSTPGNVQLTSFTDRRDRGLFADAYADGVEAGSIATPFPSTTGPLSYVGHEAIANDIANLKNGLAASGLTEGFITSLSPGSGSRVINEYYATEEEHIWAWADALREEYTAIIDAGLILQIDDPSIAENWDQINPEPSIEDYRAFTRIRVEALNYALRDLPEDRIRFHLCWGSWHGPHTTDIELKHIVDLMLEINAGAYSFEAANARHEHEWRVWEDVKLPEGKLILPGIVGHATNVVEHPELVAERIGRFASLVGRENVIASTDCGLGGRIHPQIAVAKLETLARGAELASERLWK

Samples

Sample ID Description Type Environment
1 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
22 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
26 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
48 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
49 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
50 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
51 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
54 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
56 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
57 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
58 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
59 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
60 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
61 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
62 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
65 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
72 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
73 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
75 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
82 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
83 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
84 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
93 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
94 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
95 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
99 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
100 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
101 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
102 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
103 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
106 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
107 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
110 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
111 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
112 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
113 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
114 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
115 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
121 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
122 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
127 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
139 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
143 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
144 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
158 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
159 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
160 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
163 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
164 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
165 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
166 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
167 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
168 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
169 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
170 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
171 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
172 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
173 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
174 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
175 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
176 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
177 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
178 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
179 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
180 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
181 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
182 2920879853 Kocuria salina CV6 Isolate Unclassified
183 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
184 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
185 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
186 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
187 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
188 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
189 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
190 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
191 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
192 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
193 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
194 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
195 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.86
Metatranscriptomes 1.2
Isolates 13.94

Biome Distribution

Category Percentage (%)
Aerial Root 0.4
Bulb 0
Endosphere 3.19
Nodule 0
Rhizoplane 10.36
Rhizosphere 75.3
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500650_0028797 3300053098 Bacteria 2511
2 LJQas_1002592 3300000549 Bacteria 2494
3 LJQas_1002750 3300000549 Bacteria 2419
4 Ga0055542_1003128 3300003762 Bacteria 4718
5 Ga0065714_10067176 3300005288 Bacteria 5806
6 Ga0065714_10131302 3300005288 Bacteria 1248
7 Ga0070658_10000396 3300005327 Bacteria 37928
8 Ga0070676_10043752 3300005328 Bacteria 2603
9 Ga0070683_100343841 3300005329 Bacteria 1421
10 Ga0070675_100017270 3300005354 Bacteria 5732
11 Ga0070673_100016189 3300005364 Bacteria 5264
12 Ga0070667_100124366 3300005367 Bacteria 2246
13 Ga0070709_10056874 3300005434 Bacteria 2475
14 Ga0070714_100028733 3300005435 Bacteria 4617
15 Ga0070714_100300824 3300005435 Bacteria 1495
16 Ga0070713_100130164 3300005436 Bacteria 2218
17 Ga0070711_100053234 3300005439 Bacteria 2788
18 Ga0070663_100070573 3300005455 Bacteria 2541
19 Ga0070663_100156623 3300005455 Bacteria 1751
20 Ga0070678_100007384 3300005456 Bacteria 6515
21 Ga0070665_100086005 3300005548 Bacteria 3150
22 Ga0068857_100120126 3300005577 Bacteria 2365
23 Ga0105244_10044671 3300009036 Bacteria 2281
24 Ga0105245_10187071 3300009098 Bacteria 1982
25 Ga0105246_10012899 3300011119 Bacteria 5228
26 Ga0105246_10016859 3300011119 Bacteria 4634
27 Ga0157371_10056979 3300013102 Bacteria 2771
28 Ga0157370_10005838 3300013104 Bacteria 13750
29 Ga0157370_10031373 3300013104 Bacteria 5199
30 Ga0157369_10114134 3300013105 Bacteria 2869
31 Ga0163162_10198728 3300013306 Bacteria 2134
32 Ga0197907_10704686 3300020069 Bacteria 1600
33 Ga0206352_10644198 3300020078 Bacteria 1700
34 Ga0209148_1008284 3300025254 Bacteria 2097
35 Ga0207697_10010013 3300025315 Bacteria 4071
36 Ga0207655_1036573 3300025728 Bacteria 2175
37 Ga0207713_1024813 3300025735 Bacteria 2783
38 Ga0207682_10005167 3300025893 Bacteria 5347
39 Ga0207699_10004323 3300025906 Bacteria 6796
40 Ga0207645_10000768 3300025907 Bacteria 26717
41 Ga0207705_10000006 3300025909 Bacteria 657147
42 Ga0207700_10037107 3300025928 Bacteria 3526
43 Ga0207664_10005921 3300025929 Bacteria 8365
44 Ga0207665_10007625 3300025939 Bacteria 7147
45 Ga0207691_10006097 3300025940 Bacteria 11652
46 Ga0207711_10067873 3300025941 Bacteria 3087
47 Ga0207668_10109166 3300025972 Bacteria 2072
48 Ga0207658_10021186 3300025986 Bacteria 4508
49 Ga0207678_10014626 3300026067 Bacteria 6905
50 Ga0207678_10090497 3300026067 Bacteria 2615
51 Ga0207702_10312270 3300026078 Bacteria 1495
52 Ga0207683_10114990 3300026121 Bacteria 2412
53 Ga0268266_10232135 3300028379 Bacteria 1700
54 Ga0265337_1000230 3300028556 Bacteria 30116
55 Ga0265326_10003952 3300028558 Bacteria 4809
56 Ga0265319_1004087 3300028563 Bacteria 7345
57 Ga0265334_10001925 3300028573 Bacteria 9854
58 Ga0265322_10016370 3300028654 Bacteria 2140
59 Ga0265338_10003750 3300028800 Bacteria 21109
60 Ga0265324_10005777 3300029957 Bacteria 5266
61 Ga0265763_1000261 3300030763 Bacteria 2944
62 Ga0265332_10002484 3300031238 Bacteria 9384
63 Ga0265320_10032809 3300031240 Bacteria 2655
64 Ga0265325_10028049 3300031241 Bacteria 3038
65 Ga0265340_10009174 3300031247 Bacteria 5317
66 Ga0265339_10022603 3300031249 Bacteria 3643
67 Ga0265316_10052939 3300031344 Bacteria 3182
68 Ga0307408_100125017 3300031548 Bacteria 1998
69 Ga0265313_10029017 3300031595 Bacteria 2867
70 Ga0265314_10026536 3300031711 Bacteria 4351
71 Ga0265342_10001496 3300031712 Bacteria 21649
72 Ga0307405_10013900 3300031731 Bacteria 4309
73 Ga0307405_10070736 3300031731 Bacteria 2242
74 Ga0307405_10099894 3300031731 Bacteria 1943
75 Ga0307410_10042255 3300031852 Bacteria 3012
76 Ga0307412_10008808 3300031911 Bacteria 5777
77 Ga0307412_10125232 3300031911 Bacteria 1857
78 Ga0307409_100035892 3300031995 Bacteria 3637
79 Ga0307409_100045255 3300031995 Bacteria 3321
80 Ga0307409_100336556 3300031995 Bacteria 1418
81 Ga0307416_100228532 3300032002 Bacteria 1791
82 Ga0307416_100320586 3300032002 Bacteria 1551
83 Ga0307416_100330719 3300032002 Bacteria 1531
84 Ga0307416_100339453 3300032002 Bacteria 1514
85 Ga0307411_10054772 3300032005 Bacteria 2621
86 Ga0307411_10103393 3300032005 Bacteria 2021
87 Ga0307411_10156889 3300032005 Bacteria 1699
88 Ga0316214_1000763 3300033545 Bacteria 3464
89 Ga0373934_0007432 3300035086 Bacteria 4068
90 Ga0373934_0042676 3300035086 Bacteria 1792
91 Ga0373923_0008155 3300035111 Bacteria 3721
92 Ga0373953_0004354 3300035117 Bacteria 4507
93 Ga0373954_0022137 3300035118 Bacteria 2881
94 Ga0373937_0015300 3300036401 Bacteria 6784
95 Ga0373925_0000043 3300037068 Bacteria 134268
96 Ga0395899_0007505 3300037312 Bacteria 8426
97 Ga0395899_0031524 3300037312 Bacteria 3983
98 Ga0395900_0092570 3300037418 Bacteria 3106
99 Ga0395898_0006173 3300037466 Bacteria 12834
100 Ga0395898_0111705 3300037466 Bacteria 2619
101 Ga0395898_0321346 3300037466 Bacteria 1476
102 Ga0395898_0483237 3300037466 Bacteria 1178
103 Ga0439442_001144 3300042002 Bacteria 5302
104 Ga0439442_019712 3300042002 Bacteria 1396
105 Ga0439442_019741 3300042002 Bacteria 1395
106 Ga0450907_001756 3300042146 Bacteria 4483
107 Ga0439434_0025607 3300042435 Bacteria 1780
108 Ga0466970_0079782 3300044765 Bacteria 1767
109 Ga0466960_0049596 3300044901 Bacteria 2021
110 Ga0466958_0120493 3300045836 Bacteria 1642
111 Ga0466967_0231105 3300045976 Bacteria 1761
112 Ga0495592_0039278 3300046454 Bacteria 3556
113 Ga0495629_0044926 3300046459 Bacteria 3100
114 Ga0495653_0026877 3300046463 Bacteria 4610
115 Ga0495653_0031941 3300046463 Bacteria 4183
116 Ga0495582_0022761 3300046473 Bacteria 3428
117 Ga0495639_0001001 3300046475 Bacteria 12755
118 Ga0495662_0025914 3300046476 Bacteria 2832
119 Ga0495664_0000638 3300046477 Bacteria 17858
120 Ga0495664_0050310 3300046477 Bacteria 2474
121 Ga0495594_0043561 3300046499 Bacteria 2460
122 Ga0495608_0026215 3300046511 Bacteria 3975
123 Ga0495628_0082734 3300046516 Bacteria 2493
124 Ga0495631_0006860 3300046518 Bacteria 5842
125 Ga0495642_0010456 3300046528 Bacteria 3555
126 Ga0495642_0073359 3300046528 Bacteria 1434
127 Ga0495665_0000808 3300046531 Bacteria 16416
128 Ga0495665_0018324 3300046531 Bacteria 3762
129 Ga0495640_0138317 3300046533 Bacteria 1571
130 Ga0495586_0002235 3300046535 Bacteria 10526
131 Ga0495586_0005802 3300046535 Bacteria 6602
132 Ga0495587_0002713 3300046536 Bacteria 11814
133 Ga0495587_0022467 3300046536 Bacteria 3884
134 Ga0495645_0000495 3300046543 Bacteria 27241
135 Ga0495645_0034150 3300046543 Bacteria 3712
136 Ga0495633_0029079 3300046558 Bacteria 2689
137 Ga0495667_0000098 3300046559 Bacteria 62781
138 Ga0495667_0033210 3300046559 Bacteria 3453
139 Ga0495667_0041293 3300046559 Bacteria 3060
140 Ga0495656_0007722 3300046615 Bacteria 3816
141 Ga0495634_0023975 3300046642 Bacteria 4285
142 Ga0495635_0013125 3300046663 Bacteria 5800
143 Ga0495588_0002175 3300046674 Bacteria 8389
144 Ga0495588_0013587 3300046674 Bacteria 3882
145 Ga0495588_0014156 3300046674 Bacteria 3814
146 Ga0495588_0034302 3300046674 Bacteria 2568
147 Ga0495599_0026503 3300046678 Bacteria 3633
148 Ga0495623_0049119 3300046679 Bacteria 2674
149 Ga0495646_0037931 3300046680 Bacteria 2978
150 Ga0495670_0002008 3300046691 Bacteria 10012
151 Ga0495600_0024993 3300046809 Bacteria 3848
152 Ga0495581_0024684 3300047315 Bacteria 3484
153 Ga0495604_0102480 3300047317 Bacteria 2101
154 Ga0495636_0008637 3300047318 Bacteria 4019
155 Ga0495680_0056181 3300047322 Bacteria 3048
156 Ga0495675_0011481 3300047444 Bacteria 5560
157 Ga0495681_0049300 3300047470 Bacteria 1991
158 Ga0495684_0056422 3300047471 Bacteria 2994
159 Ga0495602_0045770 3300048088 Bacteria 3957
160 Ga0496100_0023085 3300048903 Bacteria 3773
161 Ga0496101_0026223 3300048904 Bacteria 4051
162 Ga0496102_0013111 3300048905 Bacteria 7170
163 Ga0496102_0125629 3300048905 Bacteria 2397
164 Ga0496102_0137637 3300048905 Bacteria 2288
165 Ga0496102_0158635 3300048905 Bacteria 2127
166 Ga0496102_0226759 3300048905 Bacteria 1762
167 Ga0496103_0038679 3300048906 Bacteria 2928
168 Ga0496103_0039670 3300048906 Bacteria 2893
169 Ga0496103_0066353 3300048906 Bacteria 2252
170 Ga0496106_0020718 3300048909 Bacteria 4879
171 Ga0496106_0034447 3300048909 Bacteria 3782
172 Ga0496106_0150342 3300048909 Bacteria 1836
173 Ga0496107_0059975 3300048910 Bacteria 2753
174 Ga0496107_0257061 3300048910 Bacteria 1300
175 Ga0496108_0203397 3300048911 Bacteria 1718
176 Ga0496108_0215199 3300048911 Bacteria 1668
177 Ga0496108_0441750 3300048911 Bacteria 1136
178 Ga0496109_0017945 3300048912 Bacteria 6213
179 Ga0496110_0062357 3300048913 Bacteria 3292
180 Ga0496110_0105890 3300048913 Bacteria 2523
181 Ga0496111_0075158 3300048914 Bacteria 2462
182 Ga0496112_0044173 3300048915 Bacteria 4366
183 Ga0496112_0094485 3300048915 Bacteria 2960
184 Ga0496114_0044107 3300048917 Bacteria 3699
185 Ga0496115_0005608 3300048918 Bacteria 9138
186 Ga0496117_0050719 3300048920 Bacteria 2940
187 Ga0496118_0021364 3300048921 Bacteria 5699
188 Ga0496119_0016929 3300048922 Bacteria 5516
189 Ga0496122_0000515 3300048925 Bacteria 79995
190 Ga0496122_0001571 3300048925 Bacteria 35970
191 Ga0496122_0109189 3300048925 Bacteria 1822
192 Ga0496123_0000119 3300048926 Bacteria 159742
193 Ga0496124_0001707 3300048927 Bacteria 31025
194 Ga0496124_0017205 3300048927 Bacteria 6824
195 Ga0496125_0000046 3300048928 Bacteria 295288
196 Ga0496125_0035854 3300048928 Bacteria 4342
197 Ga0496126_0024494 3300048929 Bacteria 5826
198 Ga0501032_0101375 3300049569 Bacteria 1907
199 Ga0501033_0216689 3300049570 Bacteria 1364
200 Ga0501034_0057521 3300049571 Bacteria 3909
201 Ga0501036_0183050 3300049572 Bacteria 1763
202 Ga0501037_0144554 3300049573 Bacteria 1701
203 Ga0501038_0072819 3300049574 Bacteria 2911
204 Ga0501038_0092874 3300049574 Bacteria 2526
205 Ga0501039_0104071 3300049575 Bacteria 2216
206 Ga0501043_0158636 3300049579 Bacteria 1768
207 Ga0501047_0043164 3300049581 Bacteria 4355
208 Ga0501048_0054009 3300049582 Bacteria 2854
209 Ga0501073_0025870 3300049589 Bacteria 4204
210 Ga0501044_0037693 3300049823 Bacteria 5052
211 Ga0495601_0036807 3300053077 Bacteria 3058
212 Ga0500559_0000800 3300053136 Bacteria 20562
213 Ga0500559_0022093 3300053136 Bacteria 2698
214 Ga0500573_0045356 3300053140 Bacteria 2534
215 Ga0500577_0025519 3300053142 Bacteria 2001
216 Ga0500616_0017940 3300053153 Bacteria 4007
217 2537898906 2537561592 Bacteria 4348607
218 2555230686 2554235227 Bacteria 3637389
219 2644183935 2643221632 Bacteria 3406696
220 2729905742 2728369276 Bacteria 5610032
221 2775657697 2775506735 Bacteria 4556596
222 2808876525 2808606366 Bacteria 4415912
223 2808894039 2808606370 Bacteria 4942454
224 2808898027 2808606371 Bacteria 4251511
225 2812318512 2811994871 Bacteria 4497550
226 2817508123 2816332305 Bacteria 2697803
227 2839986740 2839986021 Bacteria 3685650
228 2848552076 2848551377 Bacteria 3720646
229 2862993333 2862993130 Bacteria 3860849
230 2870625161 2870622029 Bacteria 3643329
231 2893685523 2893684298 Bacteria 2897960
232 2897563075 2897561785 Bacteria 3256946
233 2905929302 2905926851 Bacteria 4423176
234 2919043737 2919042368 Bacteria 3905917
235 2919054266 2919051321 Bacteria 4210889
236 2919391852 2919391150 Bacteria 4884741
237 2920881391 2920879853 Bacteria 4216831
238 2920881392 2920879853 Bacteria 4216831
239 2939600794 2939598168 Bacteria 4687164
240 2945916274 2945916053 Bacteria 4555517
241 2945923591 2945920336 Bacteria 4501603
242 2945944730 2945941187 Bacteria 4682474
243 2945957054 2945956166 Bacteria 5110334
244 2946060067 2946059875 Bacteria 4386623
245 2966924908 2966924647 Bacteria 3268643
246 2974304217 2974302888 Bacteria 4369871
247 2984553958 2984551494 Bacteria 3877562
248 2995729099 2995726249 Bacteria 3470435
249 8004022635 8004021418 Bacteria 4313954
250 8055034645 8055034563 Bacteria 3562128
251 8055040394 8055037949 Bacteria 3337834
252 Ga0500650_0028797
253 LJQas_1002592
254 LJQas_1002750
255 Ga0055542_1003128
256 Ga0065714_10067176
257 Ga0065714_10131302
258 Ga0070658_10000396
259 Ga0070676_10043752
260 Ga0070683_100343841
261 Ga0070675_100017270
262 Ga0070673_100016189
263 Ga0070667_100124366
264 Ga0070709_10056874
265 Ga0070714_100028733
266 Ga0070714_100300824
267 Ga0070713_100130164
268 Ga0070711_100053234
269 Ga0070663_100070573
270 Ga0070663_100156623
271 Ga0070678_100007384
272 Ga0070665_100086005
273 Ga0068857_100120126
274 Ga0105244_10044671
275 Ga0105245_10187071
276 Ga0105246_10012899
277 Ga0105246_10016859
278 Ga0157371_10056979
279 Ga0157370_10005838
280 Ga0157370_10031373
281 Ga0157369_10114134
282 Ga0163162_10198728
283 Ga0197907_10704686
284 Ga0206352_10644198
285 Ga0209148_1008284
286 Ga0207697_10010013
287 Ga0207655_1036573
288 Ga0207713_1024813
289 Ga0207682_10005167
290 Ga0207699_10004323
291 Ga0207645_10000768
292 Ga0207705_10000006
293 Ga0207700_10037107
294 Ga0207664_10005921
295 Ga0207665_10007625
296 Ga0207691_10006097
297 Ga0207711_10067873
298 Ga0207668_10109166
299 Ga0207658_10021186
300 Ga0207678_10014626
301 Ga0207678_10090497
302 Ga0207702_10312270
303 Ga0207683_10114990
304 Ga0268266_10232135
305 Ga0265337_1000230
306 Ga0265326_10003952
307 Ga0265319_1004087
308 Ga0265334_10001925
309 Ga0265322_10016370
310 Ga0265338_10003750
311 Ga0265324_10005777
312 Ga0265763_1000261
313 Ga0265332_10002484
314 Ga0265320_10032809
315 Ga0265325_10028049
316 Ga0265340_10009174
317 Ga0265339_10022603
318 Ga0265316_10052939
319 Ga0307408_100125017
320 Ga0265313_10029017
321 Ga0265314_10026536
322 Ga0265342_10001496
323 Ga0307405_10013900
324 Ga0307405_10070736
325 Ga0307405_10099894
326 Ga0307410_10042255
327 Ga0307412_10008808
328 Ga0307412_10125232
329 Ga0307409_100035892
330 Ga0307409_100045255
331 Ga0307409_100336556
332 Ga0307416_100228532
333 Ga0307416_100320586
334 Ga0307416_100330719
335 Ga0307416_100339453
336 Ga0307411_10054772
337 Ga0307411_10103393
338 Ga0307411_10156889
339 Ga0316214_1000763
340 Ga0373934_0007432
341 Ga0373934_0042676
342 Ga0373923_0008155
343 Ga0373953_0004354
344 Ga0373954_0022137
345 Ga0373937_0015300
346 Ga0373925_0000043
347 Ga0395899_0007505
348 Ga0395899_0031524
349 Ga0395900_0092570
350 Ga0395898_0006173
351 Ga0395898_0111705
352 Ga0395898_0321346
353 Ga0395898_0483237
354 Ga0439442_001144
355 Ga0439442_019712
356 Ga0439442_019741
357 Ga0450907_001756
358 Ga0439434_0025607
359 Ga0466970_0079782
360 Ga0466960_0049596
361 Ga0466958_0120493
362 Ga0466967_0231105
363 Ga0495592_0039278
364 Ga0495629_0044926
365 Ga0495653_0026877
366 Ga0495653_0031941
367 Ga0495582_0022761
368 Ga0495639_0001001
369 Ga0495662_0025914
370 Ga0495664_0000638
371 Ga0495664_0050310
372 Ga0495594_0043561
373 Ga0495608_0026215
374 Ga0495628_0082734
375 Ga0495631_0006860
376 Ga0495642_0010456
377 Ga0495642_0073359
378 Ga0495665_0000808
379 Ga0495665_0018324
380 Ga0495640_0138317
381 Ga0495586_0002235
382 Ga0495586_0005802
383 Ga0495587_0002713
384 Ga0495587_0022467
385 Ga0495645_0000495
386 Ga0495645_0034150
387 Ga0495633_0029079
388 Ga0495667_0000098
389 Ga0495667_0033210
390 Ga0495667_0041293
391 Ga0495656_0007722
392 Ga0495634_0023975
393 Ga0495635_0013125
394 Ga0495588_0002175
395 Ga0495588_0013587
396 Ga0495588_0014156
397 Ga0495588_0034302
398 Ga0495599_0026503
399 Ga0495623_0049119
400 Ga0495646_0037931
401 Ga0495670_0002008
402 Ga0495600_0024993
403 Ga0495581_0024684
404 Ga0495604_0102480
405 Ga0495636_0008637
406 Ga0495680_0056181
407 Ga0495675_0011481
408 Ga0495681_0049300
409 Ga0495684_0056422
410 Ga0495602_0045770
411 Ga0496100_0023085
412 Ga0496101_0026223
413 Ga0496102_0013111
414 Ga0496102_0125629
415 Ga0496102_0137637
416 Ga0496102_0158635
417 Ga0496102_0226759
418 Ga0496103_0038679
419 Ga0496103_0039670
420 Ga0496103_0066353
421 Ga0496106_0020718
422 Ga0496106_0034447
423 Ga0496106_0150342
424 Ga0496107_0059975
425 Ga0496107_0257061
426 Ga0496108_0203397
427 Ga0496108_0215199
428 Ga0496108_0441750
429 Ga0496109_0017945
430 Ga0496110_0062357
431 Ga0496110_0105890
432 Ga0496111_0075158
433 Ga0496112_0044173
434 Ga0496112_0094485
435 Ga0496114_0044107
436 Ga0496115_0005608
437 Ga0496117_0050719
438 Ga0496118_0021364
439 Ga0496119_0016929
440 Ga0496122_0000515
441 Ga0496122_0001571
442 Ga0496122_0109189
443 Ga0496123_0000119
444 Ga0496124_0001707
445 Ga0496124_0017205
446 Ga0496125_0000046
447 Ga0496125_0035854
448 Ga0496126_0024494
449 Ga0501032_0101375
450 Ga0501033_0216689
451 Ga0501034_0057521
452 Ga0501036_0183050
453 Ga0501037_0144554
454 Ga0501038_0072819
455 Ga0501038_0092874
456 Ga0501039_0104071
457 Ga0501043_0158636
458 Ga0501047_0043164
459 Ga0501048_0054009
460 Ga0501073_0025870
461 Ga0501044_0037693
462 Ga0495601_0036807
463 Ga0500559_0000800
464 Ga0500559_0022093
465 Ga0500573_0045356
466 Ga0500577_0025519
467 Ga0500616_0017940
468 2537898906
469 2555230686
470 2644183935
471 2729905742
472 2775657697
473 2808876525
474 2808894039
475 2808898027
476 2812318512
477 2817508123
478 2839986740
479 2848552076
480 2862993333
481 2870625161
482 2893685523
483 2897563075
484 2905929302
485 2919043737
486 2919054266
487 2919391852
488 2920881391
489 2920881392
490 2939600794
491 2945916274
492 2945923591
493 2945944730
494 2945957054
495 2946060067
496 2966924908
497 2974304217
498 2984553958
499 2995729099
500 8004022635
501 8055034645
502 8055040394

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

205

428

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bq5-assembly2.cif.gz_B crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine (monoclinic) 0.8617 7 403
1t7l-assembly2.cif.gz_B crystal structure of cobalamin-independent methionine synthase from t. maritima 0.8456 7 401
3bq6-assembly2.cif.gz_B crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ (monoclinic) 0.8436 7 401
1t7l-assembly1.cif.gz_A crystal structure of cobalamin-independent methionine synthase from t. maritima 0.8417 7 404
3l7r-assembly1.cif.gz_A crystal structure of mete from streptococcus mutans 0.8416 11 402
ID Description Score Start End Superfamily
af_K7MME4_84_171_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.86 317 398 3.20.20.210
2nq5A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8255 10 401 3.20.20.210
af_Q54X49_428_818_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8243 9 404 3.20.20.210
1xdjA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.823 7 404 3.20.20.210
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8078 7 403 3.20.20.210
ID Description Score Start End GO Terms
AF-A0A537W1R3-F1-model_v4 Epoxyalkane--coenzyme M transferase 0.9977 304 402 GO:0003871
GO:0008270
GO:0009086
AF-C3PHD0-F1-model_v4 Cobalamin-independent methionine synthase MetE C-terminal/archaeal domain-containing protein 0.9878 323 404
AF-A0A0K8Q7S1-F1-model_v4 Probable methylcobalamin:homocysteine methyltransferase 0.9869 102 393 GO:0003871
GO:0008270
GO:0009086
GO:0032259
AF-A0A0X2NN37-F1-model_v4 Cobalamin-independent synthase, Catalytic domain 0.983 180 404
AF-W1VQR1-F1-model_v4 Methionine synthase vitamin-B12 independent 0.9817 161 402 GO:0003871
GO:0008270
GO:0009086

Map