F362478

General Info

Members Datasets Scaffolds Average Seq Length
251 143 502 380

Family's Representative Sequence

Representative Sequence 3300025949|Ga0207667_10176160|Ga0207667_101761601
Length 400
Sequence MSFGSYLKDVKARIRETDVEAVRKTVEGQKGAAGDGNGAGPILIDVREKDEWTEGYIPGARWISRGFLEQRIEDQVPERSAEIVVYCAGGTRSAFAAKTLEELGYSDVVSMAGGFGRWKNEGRNWVTPNTLSPEQRDRYGRHILLPEVGEAGQQKLLESRVLLLGAGGLGSPAALYLAAAGVGTIGIIDMDVVDASNLQRQILHNMDRIGERKVDSAKKTLTAMNPDVNVVTYDVRLGADNVVGIFKDYDVILDGTDNFPTRYLVNDASLKVGVPVVHGSIFRFDGMVSVYKPHDGPCYRCQVPEPPPADMAPSCSEAGVLGVLPGIIGSIQAMETIKLLLGLGEPLVGRLLAYDAIDESFRTYKVPRDPECAACSIDPEQLVIAEYDELCMPHAIAPPA

Samples

Sample ID Description Type Environment
1 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
4 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
50 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
51 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
56 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
57 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
58 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
64 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
65 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
66 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
67 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
68 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
69 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
72 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
73 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
74 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
75 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
76 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
77 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
78 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
79 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
80 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
81 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
82 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
83 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
84 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
85 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
88 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
89 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
90 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
91 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
94 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
95 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
100 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
117 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
118 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
119 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
120 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
121 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
122 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
123 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
124 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
125 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
128 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
129 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
130 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
134 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
135 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
136 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
137 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
138 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
139 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
140 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.2
Metatranscriptomes 0.8
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.58
Nodule 0
Rhizoplane 2.79
Rhizosphere 87.65
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207667_10176160 3300025949 Bacteria 2197
2 Ga0070683_100254332 3300005329 Bacteria 1671
3 Ga0070671_100002854 3300005355 Bacteria 13433
4 Ga0070705_100005524 3300005440 Bacteria 6165
5 Ga0070694_100155387 3300005444 Bacteria 1674
6 Ga0070708_100019746 3300005445 Bacteria 5668
7 Ga0070681_10015667 3300005458 Bacteria 7552
8 Ga0070681_10016652 3300005458 Bacteria 7339
9 Ga0070681_10108917 3300005458 Bacteria 2710
10 Ga0070706_100014457 3300005467 Bacteria 7292
11 Ga0070706_100049877 3300005467 Bacteria 3862
12 Ga0070707_100206537 3300005468 Bacteria 1914
13 Ga0070696_100184919 3300005546 Bacteria 1548
14 Ga0068856_100261948 3300005614 Bacteria 1744
15 Ga0068852_100223463 3300005616 Bacteria 1792
16 Ga0068863_100019247 3300005841 Bacteria 6532
17 Ga0068858_100107761 3300005842 Bacteria 2601
18 Ga0068862_100220207 3300005844 Bacteria 1718
19 Ga0081455_10000549 3300005937 Bacteria 48766
20 Ga0081455_10072809 3300005937 Bacteria 2843
21 Ga0081455_10130290 3300005937 Bacteria 1968
22 Ga0081539_10087736 3300005985 Bacteria 1615
23 Ga0081539_10099941 3300005985 Bacteria 1481
24 Ga0075365_10008965 3300006038 Bacteria 5719
25 Ga0075365_10024571 3300006038 Bacteria 3803
26 Ga0075365_10158499 3300006038 Bacteria 1576
27 Ga0075363_100001183 3300006048 Bacteria 9614
28 Ga0075364_10091962 3300006051 Bacteria 2013
29 Ga0075364_10130908 3300006051 Bacteria 1684
30 Ga0075428_100000503 3300006844 Bacteria 39692
31 Ga0075428_100149685 3300006844 Bacteria 2535
32 Ga0075428_100166262 3300006844 Bacteria 2393
33 Ga0075431_100006849 3300006847 Bacteria 11322
34 Ga0075431_100153564 3300006847 Bacteria 2369
35 Ga0075433_10070972 3300006852 Bacteria 3061
36 Ga0075429_100037409 3300006880 Bacteria 4224
37 Ga0075436_100057270 3300006914 Bacteria 2692
38 Ga0075435_100128861 3300007076 Bacteria 2116
39 Ga0105245_10000413 3300009098 Bacteria 39834
40 Ga0114129_10154660 3300009147 Bacteria 3137
41 Ga0105249_10238466 3300009553 Bacteria 1797
42 Ga0157369_10081789 3300013105 Bacteria 3456
43 Ga0157375_10331359 3300013308 Bacteria 1687
44 Ga0157375_10461655 3300013308 Bacteria 1435
45 Ga0197907_10344795 3300020069 Bacteria 1842
46 Ga0206356_10515254 3300020070 Bacteria 1696
47 Ga0213876_10002725 3300021384 Bacteria 10294
48 Ga0213876_10009485 3300021384 Bacteria 5236
49 Ga0207707_10023919 3300025912 Bacteria 5341
50 Ga0207707_10028333 3300025912 Bacteria 4896
51 Ga0207707_10161180 3300025912 Bacteria 1961
52 Ga0207687_10000207 3300025927 Bacteria 39815
53 Ga0207664_10166465 3300025929 Bacteria 1884
54 Ga0207686_10178276 3300025934 Bacteria 1505
55 Ga0207709_10094260 3300025935 Bacteria 1965
56 Ga0207669_10074296 3300025937 Bacteria 2149
57 Ga0207712_10182029 3300025961 Bacteria 1651
58 Ga0207668_10102206 3300025972 Bacteria 2132
59 Ga0207703_10167225 3300026035 Bacteria 1931
60 Ga0207702_10240741 3300026078 Bacteria 1695
61 Ga0207683_10053707 3300026121 Bacteria 3533
62 Ga0207698_10045212 3300026142 Bacteria 3315
63 Ga0268265_10285221 3300028380 Bacteria 1479
64 Ga0265338_10004821 3300028800 Bacteria 18025
65 Ga0265325_10002492 3300031241 Bacteria 12414
66 Ga0265339_10014597 3300031249 Bacteria 4730
67 Ga0265327_10011260 3300031251 Bacteria 6184
68 Ga0265327_10035103 3300031251 Bacteria 2776
69 Ga0265327_10047436 3300031251 Bacteria 2267
70 Ga0265316_10042287 3300031344 Bacteria 3643
71 Ga0265313_10003618 3300031595 Bacteria 12413
72 Ga0265314_10046030 3300031711 Bacteria 3080
73 Ga0316576_10155755 3300031727 Bacteria 1722
74 Ga0316578_10022697 3300031728 Bacteria 3503
75 Ga0307405_10153862 3300031731 Bacteria 1621
76 Ga0316577_10041603 3300031733 Bacteria 2571
77 Ga0307410_10015732 3300031852 Bacteria 4495
78 Ga0307407_10011304 3300031903 Bacteria 4245
79 Ga0307409_100007926 3300031995 Bacteria 6398
80 Ga0307409_100045776 3300031995 Bacteria 3306
81 Ga0307415_100095021 3300032126 Bacteria 2169
82 Ga0373948_0004316 3300034817 Bacteria 2241
83 Ga0373928_0001636 3300035084 Bacteria 4336
84 Ga0373929_0004005 3300035085 Bacteria 2640
85 Ga0373932_0000040 3300035112 Bacteria 30630
86 Ga0373931_0000013 3300035691 Bacteria 266932
87 Ga0373931_0000035 3300035691 Bacteria 80746
88 Ga0373937_0008851 3300036401 Bacteria 8736
89 Ga0316584_0044938 3300036712 Bacteria 3295
90 Ga0316584_0076012 3300036712 Bacteria 2517
91 Ga0436364_0756935 3300037853 Bacteria 5442
92 Ga0400485_13927 3300038735 Bacteria 7795
93 Ga0400483_131857 3300039062 Bacteria 8444
94 Ga0400483_208570 3300039062 Bacteria 32190
95 Ga0436365_0089950 3300039437 Bacteria 14164
96 Ga0436365_0650754 3300039437 Bacteria 14568
97 Ga0436365_1163283 3300039437 Bacteria 1963
98 Ga0436360_0605681 3300039438 Bacteria 1705
99 Ga0436363_1663312 3300039450 Bacteria 1322
100 Ga0439452_024020 3300042010 Bacteria 1563
101 Ga0466966_0099820 3300044684 Bacteria 1796
102 Ga0466959_0048079 3300045049 Bacteria 3136
103 Ga0466959_0095284 3300045049 Bacteria 2135
104 Ga0495651_0004972 3300046462 Bacteria 10155
105 Ga0495653_0128936 3300046463 Bacteria 1793
106 Ga0495662_0121039 3300046476 Bacteria 1285
107 Ga0495608_0017929 3300046511 Bacteria 4894
108 Ga0495628_0001869 3300046516 Bacteria 19120
109 Ga0495628_0021893 3300046516 Bacteria 5253
110 Ga0495640_0018282 3300046533 Bacteria 5203
111 Ga0495586_0023883 3300046535 Bacteria 3265
112 Ga0495667_0041434 3300046559 Bacteria 3054
113 Ga0495635_0134119 3300046663 Bacteria 1688
114 Ga0495657_0005344 3300046675 Bacteria 10160
115 Ga0495657_0080555 3300046675 Bacteria 2107
116 Ga0495623_0043050 3300046679 Bacteria 2874
117 Ga0495658_0011621 3300046683 Bacteria 4435
118 Ga0495613_0211541 3300046689 Bacteria 1364
119 Ga0495604_0111157 3300047317 Bacteria 1998
120 Ga0495604_0190497 3300047317 Bacteria 1429
121 Ga0495680_0013559 3300047322 Bacteria 7105
122 Ga0495680_0047881 3300047322 Bacteria 3360
123 Ga0495675_0094731 3300047444 Bacteria 1872
124 Ga0495684_0083520 3300047471 Bacteria 2422
125 Ga0496102_0062371 3300048905 Bacteria 3413
126 Ga0496102_0342023 3300048905 Bacteria 1409
127 Ga0496104_0023598 3300048907 Bacteria 5656
128 Ga0496104_0215054 3300048907 Bacteria 1834
129 Ga0496105_0086206 3300048908 Bacteria 2595
130 Ga0496105_0180382 3300048908 Bacteria 1729
131 Ga0496115_0115268 3300048918 Bacteria 2209
132 Ga0501031_0007850 3300049568 Bacteria 6946
133 Ga0501031_0021013 3300049568 Bacteria 4257
134 Ga0501033_0014442 3300049570 Bacteria 5997
135 Ga0501033_0057072 3300049570 Bacteria 2886
136 Ga0501034_0057870 3300049571 Bacteria 3897
137 Ga0501034_0164031 3300049571 Bacteria 2191
138 Ga0501036_0007011 3300049572 Bacteria 9174
139 Ga0501036_0047955 3300049572 Bacteria 3617
140 Ga0501036_0062113 3300049572 Bacteria 3164
141 Ga0501036_0072700 3300049572 Bacteria 2907
142 Ga0501036_0347491 3300049572 Bacteria 1239
143 Ga0501037_0073120 3300049573 Bacteria 2493
144 Ga0501037_0098951 3300049573 Bacteria 2107
145 Ga0501039_0001615 3300049575 Bacteria 16618
146 Ga0501039_0002269 3300049575 Bacteria 14262
147 Ga0501039_0036347 3300049575 Bacteria 3801
148 Ga0501039_0133363 3300049575 Bacteria 1950
149 Ga0501040_0000380 3300049576 Bacteria 26165
150 Ga0501040_0000973 3300049576 Bacteria 18132
151 Ga0501040_0007645 3300049576 Bacteria 6996
152 Ga0501040_0050244 3300049576 Bacteria 2852
153 Ga0501040_0061886 3300049576 Bacteria 2575
154 Ga0501040_0073265 3300049576 Bacteria 2366
155 Ga0501040_0148298 3300049576 Bacteria 1654
156 Ga0501041_0000800 3300049577 Bacteria 16818
157 Ga0501041_0018546 3300049577 Bacteria 4145
158 Ga0501041_0057244 3300049577 Bacteria 2384
159 Ga0501041_0085041 3300049577 Bacteria 1950
160 Ga0501042_0002911 3300049578 Bacteria 10624
161 Ga0501042_0011886 3300049578 Bacteria 5882
162 Ga0501042_0073207 3300049578 Bacteria 2451
163 Ga0501043_0011646 3300049579 Bacteria 6884
164 Ga0501043_0279429 3300049579 Bacteria 1280
165 Ga0501046_0034407 3300049580 Bacteria 4089
166 Ga0501046_0048030 3300049580 Bacteria 3381
167 Ga0501046_0090844 3300049580 Bacteria 2349
168 Ga0501047_0022289 3300049581 Bacteria 6084
169 Ga0501048_0015603 3300049582 Bacteria 5609
170 Ga0501068_0095485 3300049584 Bacteria 1838
171 Ga0501069_0129633 3300049585 Bacteria 1444
172 Ga0501071_0007967 3300049587 Bacteria 6989
173 Ga0501071_0086788 3300049587 Bacteria 2295
174 Ga0501072_0002799 3300049588 Bacteria 13087
175 Ga0501072_0006168 3300049588 Bacteria 9135
176 Ga0501072_0021670 3300049588 Bacteria 4984
177 Ga0501072_0022205 3300049588 Bacteria 4924
178 Ga0501072_0030340 3300049588 Bacteria 4228
179 Ga0501072_0055229 3300049588 Bacteria 3130
180 Ga0501072_0062770 3300049588 Bacteria 2930
181 Ga0501072_0140960 3300049588 Bacteria 1922
182 Ga0501072_0161089 3300049588 Bacteria 1790
183 Ga0501073_0079003 3300049589 Bacteria 2290
184 Ga0501073_0094960 3300049589 Bacteria 2071
185 Ga0501074_0025486 3300049590 Bacteria 4295
186 Ga0501074_0030601 3300049590 Bacteria 3901
187 Ga0501074_0083949 3300049590 Bacteria 2283
188 Ga0501074_0148280 3300049590 Bacteria 1678
189 Ga0501075_0000181 3300049591 Bacteria 32403
190 Ga0501075_0027544 3300049591 Bacteria 4189
191 Ga0501075_0057564 3300049591 Bacteria 2927
192 Ga0501075_0082131 3300049591 Bacteria 2440
193 Ga0501075_0099251 3300049591 Bacteria 2211
194 Ga0501075_0138593 3300049591 Bacteria 1853
195 Ga0501075_0165872 3300049591 Bacteria 1685
196 Ga0501075_0241115 3300049591 Bacteria 1378
197 Ga0501076_0021283 3300049592 Bacteria 4973
198 Ga0501076_0029068 3300049592 Bacteria 4296
199 Ga0501076_0031207 3300049592 Bacteria 4154
200 Ga0501076_0059762 3300049592 Bacteria 3032
201 Ga0501076_0076562 3300049592 Bacteria 2683
202 Ga0501077_0007906 3300049593 Bacteria 6569
203 Ga0501077_0013826 3300049593 Bacteria 5062
204 Ga0501079_0000148 3300049741 Bacteria 38206
205 Ga0501079_0035027 3300049741 Bacteria 3862
206 Ga0501079_0036647 3300049741 Bacteria 3779
207 Ga0501079_0070529 3300049741 Bacteria 2699
208 Ga0501079_0080954 3300049741 Bacteria 2510
209 Ga0501079_0164186 3300049741 Bacteria 1732
210 Ga0501080_0009988 3300049742 Bacteria 8676
211 Ga0501080_0031190 3300049742 Bacteria 4967
212 Ga0501080_0116794 3300049742 Bacteria 2473
213 Ga0501080_0137622 3300049742 Bacteria 2259
214 Ga0501081_0010311 3300049743 Bacteria 6100
215 Ga0501081_0023473 3300049743 Bacteria 4134
216 Ga0501081_0048357 3300049743 Bacteria 2927
217 Ga0501081_0072179 3300049743 Bacteria 2407
218 Ga0501035_0036791 3300049822 Bacteria 4435
219 Ga0501044_0001879 3300049823 Bacteria 24328
220 Ga0501045_0001677 3300049824 Bacteria 14901
221 Ga0501045_0002352 3300049824 Bacteria 12839
222 Ga0501045_0022570 3300049824 Bacteria 4507
223 Ga0501045_0073636 3300049824 Bacteria 2516
224 nmdc:mga00v17_114317_c1 3300050491 Bacteria 1714
225 nmdc:mga0yw44_117_c1 3300050492 Bacteria 27765
226 nmdc:mga0yw44_19261_c1 3300050492 Bacteria 3759
227 nmdc:mga06z11_101893_c1 3300050494 Bacteria 1576
228 nmdc:mga06r32_102533_c1 3300050510 Bacteria 2809
229 nmdc:mga06r32_154403_c1 3300050510 Bacteria 2276
230 nmdc:mga08y16_251569_c1 3300050511 Bacteria 1826
231 nmdc:mga08x19_141399_c1 3300050514 Bacteria 1626
232 nmdc:mga0a205_20245_c1 3300050515 Bacteria 6276
233 nmdc:mga0a205_336114_c1 3300050515 Bacteria 1379
234 Ga0495601_0018377 3300053077 Bacteria 4255
235 Ga0495619_0022071 3300053085 Bacteria 4069
236 Ga0495619_0036001 3300053085 Bacteria 3222
237 Ga0495619_0080450 3300053085 Bacteria 2193
238 Ga0500566_0000116 3300053094 Bacteria 41385
239 Ga0500641_0002777 3300053096 Bacteria 6194
240 Ga0500568_0000018 3300053139 Bacteria 196030
241 Ga0500616_0000517 3300053153 Bacteria 48893
242 Ga0501084_0000119 3300054114 Bacteria 59776
243 Ga0501084_0035233 3300054114 Bacteria 4184
244 Ga0501084_0053128 3300054114 Bacteria 3389
245 Ga0501084_0183259 3300054114 Bacteria 1767
246 Ga0501082_0002073 3300060353 Bacteria 17638
247 Ga0501082_0004538 3300060353 Bacteria 12119
248 Ga0501082_0059497 3300060353 Bacteria 3292
249 Ga0501082_0494749 3300060353 Bacteria 1069
250 Ga0530510_0016503 3300061734 Bacteria 5229
251 Ga0530510_0025503 3300061734 Bacteria 4227
252 Ga0207667_10176160
253 Ga0070683_100254332
254 Ga0070671_100002854
255 Ga0070705_100005524
256 Ga0070694_100155387
257 Ga0070708_100019746
258 Ga0070681_10015667
259 Ga0070681_10016652
260 Ga0070681_10108917
261 Ga0070706_100014457
262 Ga0070706_100049877
263 Ga0070707_100206537
264 Ga0070696_100184919
265 Ga0068856_100261948
266 Ga0068852_100223463
267 Ga0068863_100019247
268 Ga0068858_100107761
269 Ga0068862_100220207
270 Ga0081455_10000549
271 Ga0081455_10072809
272 Ga0081455_10130290
273 Ga0081539_10087736
274 Ga0081539_10099941
275 Ga0075365_10008965
276 Ga0075365_10024571
277 Ga0075365_10158499
278 Ga0075363_100001183
279 Ga0075364_10091962
280 Ga0075364_10130908
281 Ga0075428_100000503
282 Ga0075428_100149685
283 Ga0075428_100166262
284 Ga0075431_100006849
285 Ga0075431_100153564
286 Ga0075433_10070972
287 Ga0075429_100037409
288 Ga0075436_100057270
289 Ga0075435_100128861
290 Ga0105245_10000413
291 Ga0114129_10154660
292 Ga0105249_10238466
293 Ga0157369_10081789
294 Ga0157375_10331359
295 Ga0157375_10461655
296 Ga0197907_10344795
297 Ga0206356_10515254
298 Ga0213876_10002725
299 Ga0213876_10009485
300 Ga0207707_10023919
301 Ga0207707_10028333
302 Ga0207707_10161180
303 Ga0207687_10000207
304 Ga0207664_10166465
305 Ga0207686_10178276
306 Ga0207709_10094260
307 Ga0207669_10074296
308 Ga0207712_10182029
309 Ga0207668_10102206
310 Ga0207703_10167225
311 Ga0207702_10240741
312 Ga0207683_10053707
313 Ga0207698_10045212
314 Ga0268265_10285221
315 Ga0265338_10004821
316 Ga0265325_10002492
317 Ga0265339_10014597
318 Ga0265327_10011260
319 Ga0265327_10035103
320 Ga0265327_10047436
321 Ga0265316_10042287
322 Ga0265313_10003618
323 Ga0265314_10046030
324 Ga0316576_10155755
325 Ga0316578_10022697
326 Ga0307405_10153862
327 Ga0316577_10041603
328 Ga0307410_10015732
329 Ga0307407_10011304
330 Ga0307409_100007926
331 Ga0307409_100045776
332 Ga0307415_100095021
333 Ga0373948_0004316
334 Ga0373928_0001636
335 Ga0373929_0004005
336 Ga0373932_0000040
337 Ga0373931_0000013
338 Ga0373931_0000035
339 Ga0373937_0008851
340 Ga0316584_0044938
341 Ga0316584_0076012
342 Ga0436364_0756935
343 Ga0400485_13927
344 Ga0400483_131857
345 Ga0400483_208570
346 Ga0436365_0089950
347 Ga0436365_0650754
348 Ga0436365_1163283
349 Ga0436360_0605681
350 Ga0436363_1663312
351 Ga0439452_024020
352 Ga0466966_0099820
353 Ga0466959_0048079
354 Ga0466959_0095284
355 Ga0495651_0004972
356 Ga0495653_0128936
357 Ga0495662_0121039
358 Ga0495608_0017929
359 Ga0495628_0001869
360 Ga0495628_0021893
361 Ga0495640_0018282
362 Ga0495586_0023883
363 Ga0495667_0041434
364 Ga0495635_0134119
365 Ga0495657_0005344
366 Ga0495657_0080555
367 Ga0495623_0043050
368 Ga0495658_0011621
369 Ga0495613_0211541
370 Ga0495604_0111157
371 Ga0495604_0190497
372 Ga0495680_0013559
373 Ga0495680_0047881
374 Ga0495675_0094731
375 Ga0495684_0083520
376 Ga0496102_0062371
377 Ga0496102_0342023
378 Ga0496104_0023598
379 Ga0496104_0215054
380 Ga0496105_0086206
381 Ga0496105_0180382
382 Ga0496115_0115268
383 Ga0501031_0007850
384 Ga0501031_0021013
385 Ga0501033_0014442
386 Ga0501033_0057072
387 Ga0501034_0057870
388 Ga0501034_0164031
389 Ga0501036_0007011
390 Ga0501036_0047955
391 Ga0501036_0062113
392 Ga0501036_0072700
393 Ga0501036_0347491
394 Ga0501037_0073120
395 Ga0501037_0098951
396 Ga0501039_0001615
397 Ga0501039_0002269
398 Ga0501039_0036347
399 Ga0501039_0133363
400 Ga0501040_0000380
401 Ga0501040_0000973
402 Ga0501040_0007645
403 Ga0501040_0050244
404 Ga0501040_0061886
405 Ga0501040_0073265
406 Ga0501040_0148298
407 Ga0501041_0000800
408 Ga0501041_0018546
409 Ga0501041_0057244
410 Ga0501041_0085041
411 Ga0501042_0002911
412 Ga0501042_0011886
413 Ga0501042_0073207
414 Ga0501043_0011646
415 Ga0501043_0279429
416 Ga0501046_0034407
417 Ga0501046_0048030
418 Ga0501046_0090844
419 Ga0501047_0022289
420 Ga0501048_0015603
421 Ga0501068_0095485
422 Ga0501069_0129633
423 Ga0501071_0007967
424 Ga0501071_0086788
425 Ga0501072_0002799
426 Ga0501072_0006168
427 Ga0501072_0021670
428 Ga0501072_0022205
429 Ga0501072_0030340
430 Ga0501072_0055229
431 Ga0501072_0062770
432 Ga0501072_0140960
433 Ga0501072_0161089
434 Ga0501073_0079003
435 Ga0501073_0094960
436 Ga0501074_0025486
437 Ga0501074_0030601
438 Ga0501074_0083949
439 Ga0501074_0148280
440 Ga0501075_0000181
441 Ga0501075_0027544
442 Ga0501075_0057564
443 Ga0501075_0082131
444 Ga0501075_0099251
445 Ga0501075_0138593
446 Ga0501075_0165872
447 Ga0501075_0241115
448 Ga0501076_0021283
449 Ga0501076_0029068
450 Ga0501076_0031207
451 Ga0501076_0059762
452 Ga0501076_0076562
453 Ga0501077_0007906
454 Ga0501077_0013826
455 Ga0501079_0000148
456 Ga0501079_0035027
457 Ga0501079_0036647
458 Ga0501079_0070529
459 Ga0501079_0080954
460 Ga0501079_0164186
461 Ga0501080_0009988
462 Ga0501080_0031190
463 Ga0501080_0116794
464 Ga0501080_0137622
465 Ga0501081_0010311
466 Ga0501081_0023473
467 Ga0501081_0048357
468 Ga0501081_0072179
469 Ga0501035_0036791
470 Ga0501044_0001879
471 Ga0501045_0001677
472 Ga0501045_0002352
473 Ga0501045_0022570
474 Ga0501045_0073636
475 nmdc:mga00v17_114317_c1
476 nmdc:mga0yw44_117_c1
477 nmdc:mga0yw44_19261_c1
478 nmdc:mga06z11_101893_c1
479 nmdc:mga06r32_102533_c1
480 nmdc:mga06r32_154403_c1
481 nmdc:mga08y16_251569_c1
482 nmdc:mga08x19_141399_c1
483 nmdc:mga0a205_20245_c1
484 nmdc:mga0a205_336114_c1
485 Ga0495601_0018377
486 Ga0495619_0022071
487 Ga0495619_0036001
488 Ga0495619_0080450
489 Ga0500566_0000116
490 Ga0500641_0002777
491 Ga0500568_0000018
492 Ga0500616_0000517
493 Ga0501084_0000119
494 Ga0501084_0035233
495 Ga0501084_0053128
496 Ga0501084_0183259
497 Ga0501082_0002073
498 Ga0501082_0004538
499 Ga0501082_0059497
500 Ga0501082_0494749
501 Ga0530510_0016503
502 Ga0530510_0025503

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00899

ThiF

ThiF family

139

374

0.99

PF00581

Rhodanese

Rhodanese-like domain

30

121

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gk5-assembly1.cif.gz_A crystal structure of rhodanese-related protein (tvg0868615) from thermoplasma volcanium, northeast structural genomics consortium target tvr109a 0.9476 16 116
3tp9-assembly1.cif.gz_B crystal structure of alicyclobacillus acidocaldarius protein with beta-lactamase and rhodanese domains 0.9463 15 115
3hix-assembly3.cif.gz_C crystal structure of the rhodanese_3 like domain from anabaena sp alr3790 protein. northeast structural genomics consortium target nsr437i 0.9277 30 115
5ve5-assembly3.cif.gz_C crystal structure of persulfide dioxygenase rhodanese fusion protein with rhodanese domain inactivating mutation (c314s) from burkholderia phytofirmans in complex with glutathione 0.9268 17 116
5ve4-assembly2.cif.gz_B crystal structure of persulfide dioxygenase-rhodanese fusion protein with rhodanese domain inactivating mutation (c314s) from burkholderia phytofirmans 0.9218 17 113
ID Description Score Start End Superfamily
3tp9B03 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9484 16 115 3.40.250.10
3gk5A00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9476 16 116 3.40.250.10
3tp9B03 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.93 16 115 3.40.250.10
3gk5A00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9206 16 116 3.40.250.10
5ve3A02 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9144 12 113 3.40.250.10
ID Description Score Start End GO Terms
AF-A0A6A7LS05-F1-model_v4 Rhodanese domain-containing protein 0.9666 30 116 GO:0004792
AF-A0A1F4DCA7-F1-model_v4 Rhodanese domain-containing protein 0.9661 17 115 GO:0016020
AF-A0A3B9W7A6-F1-model_v4 Sulfurtransferase 0.9656 4 110 GO:0004792
AF-A0A351BWX5-F1-model_v4 Sulfurtransferase 0.9598 1 115 GO:0016740
AF-A0A7Y8LPW2-F1-model_v4 Rhodanese-like domain-containing protein 0.9583 8 115 GO:0004792

Map