F360891

General Info

Members Datasets Scaffolds Average Seq Length
249 162 498 391

Family's Representative Sequence

Representative Sequence 3300035170|Ga0373943_0004153|Ga0373943_0004153_24_1217
Length 397
Sequence LASLIFRKGLDLKQAVAGRLAENYHSAIVERIKAEDFTFRSGRLTVHLAREFGFCYGVDRAVDYAYQTRERFPNRQVFLTGEIIHNPHVNEKLRSMGVRFLDQDGIDIDRLGPEDVVILPAFGVTTEMLQRLDRAGCTLIDTTCGSVLNVWKNVRRYAEGGYTSIIHGKFWHEETQATASQAVASGGRYLVVFDKSEARHVCDFIATGGPDQRAAFLERFGSAASPGFDPEPDLRRIGLANQTTMLMSESLEIGEMLRAAMLARHGADKLESGFQAFDTICSATQDRQDAVVALLNERPVDLMIVIGGYNSSNTCNLARICATTRPTFHIADPDCLVSVDEIRHRPVGQKTEVISTEWLPPAGGVAIGLTSGASTPDNLVGAAIDRLSTFTQTASVR

Samples

Sample ID Description Type Environment
1 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
26 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
40 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
115 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
116 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
117 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
118 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
119 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
120 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
121 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
122 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
123 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
129 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
135 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
136 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
137 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
143 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
158 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
161 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
162 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.61
Rhizosphere 95.98
Stem 0
Stem Tuber 0
Unclassified 10.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373943_0004153 3300035170 Bacteria 6573
2 SwRhRL2b_contig_2814056 2162886007 Bacteria 1915
3 Ga0065704_10004823 3300005289 Bacteria 5174
4 Ga0065712_10095553 3300005290 Bacteria 2197
5 Ga0065712_10111330 3300005290 Bacteria 1819
6 Ga0065707_10001847 3300005295 Bacteria 9441
7 Ga0070658_10176667 3300005327 Bacteria 1796
8 Ga0070676_10014881 3300005328 Bacteria 4281
9 Ga0070670_100154092 3300005331 Bacteria 1989
10 Ga0070666_10007322 3300005335 Bacteria 6799
11 Ga0070660_100007827 3300005339 Bacteria 7452
12 Ga0070689_100068112 3300005340 Bacteria 2776
13 Ga0070691_10008017 3300005341 Bacteria 4831
14 Ga0070687_100006326 3300005343 Bacteria 4848
15 Ga0070668_100051972 3300005347 Unclassified 3158
16 Ga0070669_100036731 3300005353 Bacteria 3551
17 Ga0070669_100089139 3300005353 Bacteria 2310
18 Ga0070675_100000338 3300005354 Bacteria 31769
19 Ga0070675_100029553 3300005354 Unclassified 4422
20 Ga0070671_100065659 3300005355 Bacteria 3023
21 Ga0070674_100035076 3300005356 Bacteria 3357
22 Ga0070673_100012586 3300005364 Bacteria 5813
23 Ga0070688_100012812 3300005365 Bacteria 4709
24 Ga0070659_100263326 3300005366 Unclassified 1431
25 Ga0070667_100059475 3300005367 Bacteria 3233
26 Ga0070709_10037614 3300005434 Unclassified 2957
27 Ga0070713_100030948 3300005436 Unclassified 4256
28 Ga0070701_10001545 3300005438 Bacteria 8545
29 Ga0070705_100007244 3300005440 Bacteria 5455
30 Ga0070700_100189260 3300005441 Bacteria 1438
31 Ga0070694_100015226 3300005444 Bacteria 4825
32 Ga0070708_100219233 3300005445 Bacteria 1784
33 Ga0070662_100174014 3300005457 Unclassified 1693
34 Ga0070681_10002029 3300005458 Bacteria 18329
35 Ga0068867_100065811 3300005459 Bacteria 2698
36 Ga0070698_100073588 3300005471 Bacteria 3423
37 Ga0070699_100008811 3300005518 Bacteria 8743
38 Ga0070679_100007881 3300005530 Bacteria 9989
39 Ga0070679_100108802 3300005530 Bacteria 2758
40 Ga0070684_100108182 3300005535 Unclassified 2491
41 Ga0070697_100021848 3300005536 Bacteria 5073
42 Ga0070686_100001326 3300005544 Bacteria 13995
43 Ga0070695_100004707 3300005545 Bacteria 8028
44 Ga0070695_100142114 3300005545 Bacteria 1666
45 Ga0070696_100045525 3300005546 Bacteria 3040
46 Ga0070665_100146154 3300005548 Unclassified 2367
47 Ga0070704_100011960 3300005549 Bacteria 5346
48 Ga0070704_100178802 3300005549 Bacteria 1695
49 Ga0068855_100022465 3300005563 Bacteria 7561
50 Ga0068857_100134285 3300005577 Bacteria 2234
51 Ga0068854_100013021 3300005578 Bacteria 5451
52 Ga0068864_100004451 3300005618 Bacteria 11516
53 Ga0068864_100028776 3300005618 Unclassified 4701
54 Ga0068863_100010277 3300005841 Bacteria 9094
55 Ga0068863_100298708 3300005841 Unclassified 1562
56 Ga0068858_100004654 3300005842 Bacteria 13446
57 Ga0068858_100195596 3300005842 Bacteria 1911
58 Ga0068860_100069591 3300005843 Bacteria 3345
59 Ga0068860_100111020 3300005843 Bacteria 2621
60 Ga0068860_100339195 3300005843 Bacteria 1477
61 Ga0068862_100073145 3300005844 Bacteria 2962
62 Ga0081455_10072247 3300005937 Bacteria 2857
63 Ga0081539_10074843 3300005985 Bacteria 1801
64 Ga0097621_100000059 3300006237 Bacteria 57332
65 Ga0097621_100002470 3300006237 Bacteria 12658
66 Ga0068871_100002676 3300006358 Bacteria 12160
67 Ga0075428_100210744 3300006844 Bacteria 2100
68 Ga0075433_10058903 3300006852 Bacteria 3360
69 Ga0075434_100001543 3300006871 Bacteria 19509
70 Ga0075434_100202475 3300006871 Bacteria 2005
71 Ga0075434_100405431 3300006871 Bacteria 1384
72 Ga0068865_100002143 3300006881 Bacteria 11657
73 Ga0068865_100025442 3300006881 Bacteria 3894
74 Ga0075436_100003926 3300006914 Bacteria 10191
75 Ga0075436_100009945 3300006914 Bacteria 6507
76 Ga0075436_100010468 3300006914 Bacteria 6357
77 Ga0075436_100027077 3300006914 Bacteria 3947
78 Ga0075436_100034484 3300006914 Bacteria 3490
79 Ga0075435_100000440 3300007076 Bacteria 25381
80 Ga0075435_100001007 3300007076 Bacteria 17864
81 Ga0075435_100004356 3300007076 Bacteria 9726
82 Ga0105240_10009302 3300009093 Bacteria 13935
83 Ga0111539_10019964 3300009094 Bacteria 8254
84 Ga0111539_10030399 3300009094 Bacteria 6565
85 Ga0105247_10015965 3300009101 Bacteria 4498
86 Ga0105247_10024778 3300009101 Bacteria 3616
87 Ga0114129_10013198 3300009147 Bacteria 11769
88 Ga0114129_10021541 3300009147 Bacteria 9150
89 Ga0114129_10022148 3300009147 Bacteria 9019
90 Ga0114129_10027118 3300009147 Bacteria 8110
91 Ga0114129_10029814 3300009147 Bacteria 7726
92 Ga0114129_10042697 3300009147 Bacteria 6382
93 Ga0114129_10086440 3300009147 Unclassified 4349
94 Ga0114129_10170876 3300009147 Bacteria 2964
95 Ga0114129_10472817 3300009147 Bacteria 1641
96 Ga0105243_10005067 3300009148 Bacteria 10339
97 Ga0105243_10071557 3300009148 Bacteria 2804
98 Ga0105242_10083676 3300009176 Bacteria 2673
99 Ga0105248_10007961 3300009177 Bacteria 11652
100 Ga0105248_10116340 3300009177 Bacteria 3016
101 Ga0105248_10207622 3300009177 Bacteria 2207
102 Ga0105248_10379249 3300009177 Bacteria 1592
103 Ga0105238_10131463 3300009551 Bacteria 2481
104 Ga0157378_10100227 3300013297 Bacteria 2644
105 Ga0163162_10119411 3300013306 Bacteria 2739
106 Ga0157372_10258856 3300013307 Bacteria 2020
107 Ga0157375_10351649 3300013308 Bacteria 1639
108 Ga0163163_10004169 3300014325 Bacteria 12322
109 Ga0163163_10234073 3300014325 Bacteria 1886
110 Ga0157380_10175241 3300014326 Bacteria 1878
111 Ga0157377_10020646 3300014745 Bacteria 3454
112 Ga0157379_10011912 3300014968 Bacteria 7600
113 Ga0157379_10040728 3300014968 Bacteria 4147
114 Ga0157376_10058202 3300014969 Bacteria 3236
115 Ga0207710_10014344 3300025900 Bacteria 3340
116 Ga0207688_10125942 3300025901 Bacteria 1498
117 Ga0207680_10005568 3300025903 Bacteria 6024
118 Ga0207645_10004869 3300025907 Bacteria 9847
119 Ga0207705_10141398 3300025909 Bacteria 1798
120 Ga0207707_10006097 3300025912 Bacteria 10544
121 Ga0207695_10037672 3300025913 Bacteria 5216
122 Ga0207695_10088469 3300025913 Bacteria 3117
123 Ga0207660_10040779 3300025917 Bacteria 3252
124 Ga0207662_10004155 3300025918 Bacteria 7578
125 Ga0207657_10017425 3300025919 Bacteria 6887
126 Ga0207652_10006972 3300025921 Bacteria 9104
127 Ga0207652_10096329 3300025921 Bacteria 2607
128 Ga0207646_10042133 3300025922 Bacteria 4103
129 Ga0207681_10008422 3300025923 Bacteria 6303
130 Ga0207681_10012098 3300025923 Bacteria 5317
131 Ga0207681_10093249 3300025923 Unclassified 2155
132 Ga0207659_10002729 3300025926 Bacteria 10527
133 Ga0207659_10010552 3300025926 Bacteria 5808
134 Ga0207700_10017912 3300025928 Unclassified 4743
135 Ga0207690_10046064 3300025932 Bacteria 2886
136 Ga0207686_10005942 3300025934 Bacteria 6553
137 Ga0207709_10027980 3300025935 Unclassified 3255
138 Ga0207704_10001109 3300025938 Bacteria 11974
139 Ga0207704_10242720 3300025938 Bacteria 1347
140 Ga0207665_10047874 3300025939 Bacteria 2868
141 Ga0207691_10024882 3300025940 Bacteria 5626
142 Ga0207691_10061516 3300025940 Bacteria 3410
143 Ga0207711_10002168 3300025941 Bacteria 17661
144 Ga0207711_10065652 3300025941 Bacteria 3137
145 Ga0207711_10099106 3300025941 Bacteria 2575
146 Ga0207667_10025491 3300025949 Bacteria 6470
147 Ga0207667_10340344 3300025949 Bacteria 1531
148 Ga0207668_10094121 3300025972 Bacteria 2209
149 Ga0207668_10252314 3300025972 Unclassified 1433
150 Ga0207640_10003227 3300025981 Bacteria 8784
151 Ga0207640_10127312 3300025981 Bacteria 1835
152 Ga0207703_10009422 3300026035 Bacteria 7671
153 Ga0207708_10009358 3300026075 Bacteria 7253
154 Ga0207708_10061482 3300026075 Bacteria 2868
155 Ga0207641_10010101 3300026088 Bacteria 7761
156 Ga0207648_10037841 3300026089 Bacteria 4247
157 Ga0207648_10051429 3300026089 Bacteria 3601
158 Ga0207648_10053541 3300026089 Bacteria 3527
159 Ga0207676_10009233 3300026095 Bacteria 7017
160 Ga0207676_10021809 3300026095 Unclassified 4704
161 Ga0207674_10139871 3300026116 Bacteria 2381
162 Ga0207675_100002151 3300026118 Bacteria 19575
163 Ga0207675_100083881 3300026118 Bacteria 2989
164 Ga0207675_100102173 3300026118 Bacteria 2701
165 Ga0207675_100298089 3300026118 Bacteria 1570
166 Ga0207683_10106343 3300026121 Bacteria 2509
167 Ga0207428_10009919 3300027907 Bacteria 8529
168 Ga0207428_10012492 3300027907 Bacteria 7459
169 Ga0207428_10084360 3300027907 Bacteria 2476
170 Ga0268265_10001534 3300028380 Bacteria 19212
171 Ga0268265_10007646 3300028380 Bacteria 7292
172 Ga0268265_10289607 3300028380 Unclassified 1469
173 Ga0268264_10079180 3300028381 Bacteria 2803
174 Ga0268264_10144392 3300028381 Bacteria 2126
175 Ga0373948_0006112 3300034817 Unclassified 1978
176 Ga0373959_0005571 3300034820 Unclassified 2066
177 Ga0373929_0008739 3300035085 Unclassified 1869
178 Ga0373940_0002082 3300035088 Unclassified 3805
179 Ga0373949_0004176 3300035090 Unclassified 3336
180 Ga0373951_0002281 3300035091 Bacteria 4878
181 Ga0373932_0000168 3300035112 Bacteria 19237
182 Ga0373939_0022975 3300035114 Bacteria 1723
183 Ga0373941_0024733 3300035115 Unclassified 1727
184 Ga0373942_0003091 3300035207 Bacteria 3941
185 Ga0373925_0047896 3300037068 Bacteria 3183
186 Ga0436365_1180124 3300039437 Bacteria 1791
187 Ga0466963_0066116 3300044694 Bacteria 2425
188 Ga0451576_0218023 3300045051 Unclassified 1992
189 Ga0451576_0255966 3300045051 Bacteria 1830
190 Ga0451576_0280617 3300045051 Bacteria 1742
191 Ga0495592_0011410 3300046454 Bacteria 6723
192 Ga0495580_0149597 3300046472 Bacteria 1618
193 Ga0495580_0158707 3300046472 Bacteria 1566
194 Ga0495628_0069554 3300046516 Bacteria 2746
195 Ga0495630_0002872 3300046517 Bacteria 11963
196 Ga0495621_0036553 3300046539 Bacteria 1705
197 Ga0495645_0003412 3300046543 Bacteria 10768
198 Ga0495659_0040794 3300046664 Bacteria 1656
199 Ga0495623_0046427 3300046679 Bacteria 2757
200 Ga0495647_0073791 3300046681 Bacteria 1371
201 Ga0495669_0040387 3300046684 Bacteria 2069
202 Ga0495669_0068264 3300046684 Bacteria 1617
203 Ga0495613_0009643 3300046689 Bacteria 7173
204 Ga0495600_0076288 3300046809 Bacteria 2189
205 Ga0495604_0013535 3300047317 Bacteria 6504
206 Ga0495674_0126867 3300047319 Bacteria 2152
207 Ga0495675_0070007 3300047444 Bacteria 2215
208 Ga0495684_0000089 3300047471 Bacteria 64693
209 Ga0496106_0286519 3300048909 Bacteria 1320
210 Ga0496108_0104544 3300048911 Bacteria 2416
211 Ga0496108_0332104 3300048911 Bacteria 1326
212 Ga0496109_0432852 3300048912 Bacteria 1243
213 Ga0496110_0030612 3300048913 Unclassified 4640
214 Ga0496112_0016099 3300048915 Bacteria 6992
215 Ga0496113_0005512 3300048916 Bacteria 7901
216 Ga0496114_0036759 3300048917 Bacteria 4049
217 Ga0496114_0306867 3300048917 Bacteria 1402
218 Ga0501034_0009331 3300049571 Bacteria 10281
219 Ga0501047_0007955 3300049581 Bacteria 9998
220 Ga0501044_0005448 3300049823 Bacteria 14138
221 nmdc:mga05p37_113057_c1 3300050507 Bacteria 3339
222 nmdc:mga05p37_238915_c1 3300050507 Bacteria 2186
223 nmdc:mga05p37_51912_c1 3300050507 Bacteria 5042
224 nmdc:mga05p37_66295_c1 3300050507 Bacteria 4441
225 nmdc:mga05p37_67121_c1 3300050507 Bacteria 4413
226 nmdc:mga05p37_69958_c1 3300050507 Unclassified 4317
227 nmdc:mga05p37_74815_c1 3300050507 Bacteria 4169
228 nmdc:mga08y16_106398_c1 3300050511 Bacteria 2920
229 nmdc:mga08y16_23065_c1 3300050511 Bacteria 6571
230 nmdc:mga0n895_163221_c1 3300050512 Bacteria 2259
231 nmdc:mga0n895_17763_c1 3300050512 Bacteria 6565
232 nmdc:mga0n895_3972_c1 3300050512 Bacteria 12024
233 nmdc:mga0n895_40241_c1 3300050512 Bacteria 4540
234 nmdc:mga0n895_418757_c1 3300050512 Unclassified 1354
235 nmdc:mga0n895_57_c1 3300050512 Bacteria 65730
236 nmdc:mga0rr50_398_c1 3300050513 Bacteria 23629
237 nmdc:mga0rr50_5_c1 3300050513 Bacteria 327169
238 nmdc:mga08x19_1174_c1 3300050514 Bacteria 16412
239 nmdc:mga08x19_41490_c1 3300050514 Bacteria 2931
240 nmdc:mga08x19_90536_c1 3300050514 Bacteria 2019
241 nmdc:mga0a205_15508_c1 3300050515 Bacteria 7121
242 nmdc:mga0a205_181491_c1 3300050515 Bacteria 1999
243 nmdc:mga0a205_325849_c1 3300050515 Bacteria 1406
244 nmdc:mga0a205_3505_c1 3300050515 Bacteria 14014
245 nmdc:mga0a205_4747_c1 3300050515 Bacteria 12211
246 Ga0495601_0017768 3300053077 Bacteria 4321
247 Ga0495601_0123910 3300053077 Bacteria 1680
248 Ga0495612_0033601 3300053078 Bacteria 2076
249 Ga0495619_0004851 3300053085 Bacteria 8532
250 Ga0373943_0004153
251 SwRhRL2b_contig_2814056
252 Ga0065704_10004823
253 Ga0065712_10095553
254 Ga0065712_10111330
255 Ga0065707_10001847
256 Ga0070658_10176667
257 Ga0070676_10014881
258 Ga0070670_100154092
259 Ga0070666_10007322
260 Ga0070660_100007827
261 Ga0070689_100068112
262 Ga0070691_10008017
263 Ga0070687_100006326
264 Ga0070668_100051972
265 Ga0070669_100036731
266 Ga0070669_100089139
267 Ga0070675_100000338
268 Ga0070675_100029553
269 Ga0070671_100065659
270 Ga0070674_100035076
271 Ga0070673_100012586
272 Ga0070688_100012812
273 Ga0070659_100263326
274 Ga0070667_100059475
275 Ga0070709_10037614
276 Ga0070713_100030948
277 Ga0070701_10001545
278 Ga0070705_100007244
279 Ga0070700_100189260
280 Ga0070694_100015226
281 Ga0070708_100219233
282 Ga0070662_100174014
283 Ga0070681_10002029
284 Ga0068867_100065811
285 Ga0070698_100073588
286 Ga0070699_100008811
287 Ga0070679_100007881
288 Ga0070679_100108802
289 Ga0070684_100108182
290 Ga0070697_100021848
291 Ga0070686_100001326
292 Ga0070695_100004707
293 Ga0070695_100142114
294 Ga0070696_100045525
295 Ga0070665_100146154
296 Ga0070704_100011960
297 Ga0070704_100178802
298 Ga0068855_100022465
299 Ga0068857_100134285
300 Ga0068854_100013021
301 Ga0068864_100004451
302 Ga0068864_100028776
303 Ga0068863_100010277
304 Ga0068863_100298708
305 Ga0068858_100004654
306 Ga0068858_100195596
307 Ga0068860_100069591
308 Ga0068860_100111020
309 Ga0068860_100339195
310 Ga0068862_100073145
311 Ga0081455_10072247
312 Ga0081539_10074843
313 Ga0097621_100000059
314 Ga0097621_100002470
315 Ga0068871_100002676
316 Ga0075428_100210744
317 Ga0075433_10058903
318 Ga0075434_100001543
319 Ga0075434_100202475
320 Ga0075434_100405431
321 Ga0068865_100002143
322 Ga0068865_100025442
323 Ga0075436_100003926
324 Ga0075436_100009945
325 Ga0075436_100010468
326 Ga0075436_100027077
327 Ga0075436_100034484
328 Ga0075435_100000440
329 Ga0075435_100001007
330 Ga0075435_100004356
331 Ga0105240_10009302
332 Ga0111539_10019964
333 Ga0111539_10030399
334 Ga0105247_10015965
335 Ga0105247_10024778
336 Ga0114129_10013198
337 Ga0114129_10021541
338 Ga0114129_10022148
339 Ga0114129_10027118
340 Ga0114129_10029814
341 Ga0114129_10042697
342 Ga0114129_10086440
343 Ga0114129_10170876
344 Ga0114129_10472817
345 Ga0105243_10005067
346 Ga0105243_10071557
347 Ga0105242_10083676
348 Ga0105248_10007961
349 Ga0105248_10116340
350 Ga0105248_10207622
351 Ga0105248_10379249
352 Ga0105238_10131463
353 Ga0157378_10100227
354 Ga0163162_10119411
355 Ga0157372_10258856
356 Ga0157375_10351649
357 Ga0163163_10004169
358 Ga0163163_10234073
359 Ga0157380_10175241
360 Ga0157377_10020646
361 Ga0157379_10011912
362 Ga0157379_10040728
363 Ga0157376_10058202
364 Ga0207710_10014344
365 Ga0207688_10125942
366 Ga0207680_10005568
367 Ga0207645_10004869
368 Ga0207705_10141398
369 Ga0207707_10006097
370 Ga0207695_10037672
371 Ga0207695_10088469
372 Ga0207660_10040779
373 Ga0207662_10004155
374 Ga0207657_10017425
375 Ga0207652_10006972
376 Ga0207652_10096329
377 Ga0207646_10042133
378 Ga0207681_10008422
379 Ga0207681_10012098
380 Ga0207681_10093249
381 Ga0207659_10002729
382 Ga0207659_10010552
383 Ga0207700_10017912
384 Ga0207690_10046064
385 Ga0207686_10005942
386 Ga0207709_10027980
387 Ga0207704_10001109
388 Ga0207704_10242720
389 Ga0207665_10047874
390 Ga0207691_10024882
391 Ga0207691_10061516
392 Ga0207711_10002168
393 Ga0207711_10065652
394 Ga0207711_10099106
395 Ga0207667_10025491
396 Ga0207667_10340344
397 Ga0207668_10094121
398 Ga0207668_10252314
399 Ga0207640_10003227
400 Ga0207640_10127312
401 Ga0207703_10009422
402 Ga0207708_10009358
403 Ga0207708_10061482
404 Ga0207641_10010101
405 Ga0207648_10037841
406 Ga0207648_10051429
407 Ga0207648_10053541
408 Ga0207676_10009233
409 Ga0207676_10021809
410 Ga0207674_10139871
411 Ga0207675_100002151
412 Ga0207675_100083881
413 Ga0207675_100102173
414 Ga0207675_100298089
415 Ga0207683_10106343
416 Ga0207428_10009919
417 Ga0207428_10012492
418 Ga0207428_10084360
419 Ga0268265_10001534
420 Ga0268265_10007646
421 Ga0268265_10289607
422 Ga0268264_10079180
423 Ga0268264_10144392
424 Ga0373948_0006112
425 Ga0373959_0005571
426 Ga0373929_0008739
427 Ga0373940_0002082
428 Ga0373949_0004176
429 Ga0373951_0002281
430 Ga0373932_0000168
431 Ga0373939_0022975
432 Ga0373941_0024733
433 Ga0373942_0003091
434 Ga0373925_0047896
435 Ga0436365_1180124
436 Ga0466963_0066116
437 Ga0451576_0218023
438 Ga0451576_0255966
439 Ga0451576_0280617
440 Ga0495592_0011410
441 Ga0495580_0149597
442 Ga0495580_0158707
443 Ga0495628_0069554
444 Ga0495630_0002872
445 Ga0495621_0036553
446 Ga0495645_0003412
447 Ga0495659_0040794
448 Ga0495623_0046427
449 Ga0495647_0073791
450 Ga0495669_0040387
451 Ga0495669_0068264
452 Ga0495613_0009643
453 Ga0495600_0076288
454 Ga0495604_0013535
455 Ga0495674_0126867
456 Ga0495675_0070007
457 Ga0495684_0000089
458 Ga0496106_0286519
459 Ga0496108_0104544
460 Ga0496108_0332104
461 Ga0496109_0432852
462 Ga0496110_0030612
463 Ga0496112_0016099
464 Ga0496113_0005512
465 Ga0496114_0036759
466 Ga0496114_0306867
467 Ga0501034_0009331
468 Ga0501047_0007955
469 Ga0501044_0005448
470 nmdc:mga05p37_113057_c1
471 nmdc:mga05p37_238915_c1
472 nmdc:mga05p37_51912_c1
473 nmdc:mga05p37_66295_c1
474 nmdc:mga05p37_67121_c1
475 nmdc:mga05p37_69958_c1
476 nmdc:mga05p37_74815_c1
477 nmdc:mga08y16_106398_c1
478 nmdc:mga08y16_23065_c1
479 nmdc:mga0n895_163221_c1
480 nmdc:mga0n895_17763_c1
481 nmdc:mga0n895_3972_c1
482 nmdc:mga0n895_40241_c1
483 nmdc:mga0n895_418757_c1
484 nmdc:mga0n895_57_c1
485 nmdc:mga0rr50_398_c1
486 nmdc:mga0rr50_5_c1
487 nmdc:mga08x19_1174_c1
488 nmdc:mga08x19_41490_c1
489 nmdc:mga08x19_90536_c1
490 nmdc:mga0a205_15508_c1
491 nmdc:mga0a205_181491_c1
492 nmdc:mga0a205_325849_c1
493 nmdc:mga0a205_3505_c1
494 nmdc:mga0a205_4747_c1
495 Ga0495601_0017768
496 Ga0495601_0123910
497 Ga0495612_0033601
498 Ga0495619_0004851

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02401

LYTB

LytB protein

46

388

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ke8-assembly1.cif.gz_B crystal structure of isph:hmbpp-complex 0.8355 46 388
3szu-assembly1.cif.gz_A isph:hmbpp complex structure of e126q mutant 0.8343 46 388
3t0f-assembly1.cif.gz_A isph:hmbpp (substrate) structure of the e126d mutant 0.8249 39 388
3t0g-assembly1.cif.gz_A isph:hmbpp (substrate) structure of the t167c mutant 0.82 46 392
3t0f-assembly2.cif.gz_B isph:hmbpp (substrate) structure of the e126d mutant 0.8171 39 388
ID Description Score Start End Superfamily
af_I1LJH2_343_461_3.40.1010.20 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.9438 277 393 3.40.1010.20
af_C0PDR3_331_462_3.40.1010.20 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.9159 266 391 3.40.1010.20
af_I1LJH2_343_461_3.40.1010.20 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.9059 277 393 3.40.1010.20
af_P9WKF9_216_320_3.40.1010.20 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.8848 282 389 3.40.1010.20
3f7tA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8837 55 144 3.40.50.11270
ID Description Score Start End GO Terms
AF-A0A2V6F9I0-F1-model_v4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.9745 283 385 GO:0019288
GO:0046872
GO:0050992
GO:0051539
GO:0051745
AF-A0A382UUI6-F1-model_v4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.9629 277 390 GO:0019288
GO:0046872
GO:0050992
GO:0051539
GO:0051745
AF-A0A2V5MXU7-F1-model_v4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.9488 269 385 GO:0019288
GO:0046872
GO:0050992
GO:0051539
GO:0051745
AF-A0A6P0T9C2-F1-model_v4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.7.4) 0.9355 111 393 GO:0019288
GO:0046872
GO:0050992
GO:0051539
GO:0051745
AF-A0A7W1P877-F1-model_v4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.7.4) 0.9321 78 388 GO:0019288
GO:0046872
GO:0050992
GO:0051539
GO:0051745

Map