F360697

General Info

Members Datasets Scaffolds Average Seq Length
249 151 498 186

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_11684397|Ga0111539_116843971
Length 217
Sequence MGRALPAAILDPQRQSTPFHPAAGTEESTMKPFYKYAGIAASIILIAFGIGASVMGISGRAEVRDTIAREQLVGTPDMNAAIANKPVETGAQAKLFAAGIRKHTLEATGGQVYSEMGRFLDKAGKPTSDEKAAAIDKTTGKPVENQARNIWVTSTALTTALNTSFFAENVATFAIVMGVALLLTGVGFLVLVLRLPVEVADKVRHTSAVAGAPAAQS

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300004785 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300029285 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B3.stno.R1 Metatranscriptome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
105 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
106 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
111 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
115 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
116 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
117 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
118 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
121 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
122 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
123 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
135 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
143 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.16
Metatranscriptomes 10.84
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.01
Nodule 0
Rhizoplane 10.04
Rhizosphere 85.94
Stem 0
Stem Tuber 0
Unclassified 11.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_11684397 3300009094 Unclassified 735
2 Ga0058858_1353865 3300004785 Bacteria 593
3 Ga0070683_100237171 3300005329 Bacteria 1735
4 Ga0070683_100451418 3300005329 Bacteria 1227
5 Ga0068869_100200423 3300005334 Bacteria 1574
6 Ga0068869_100640095 3300005334 Bacteria 902
7 Ga0070682_100179824 3300005337 Bacteria 1476
8 Ga0070682_100287139 3300005337 Bacteria 1202
9 Ga0068868_100024415 3300005338 Bacteria 4586
10 Ga0068868_100344419 3300005338 Bacteria 1275
11 Ga0068868_100898919 3300005338 Bacteria 805
12 Ga0070660_100606446 3300005339 Bacteria 915
13 Ga0070689_100498797 3300005340 Bacteria 1042
14 Ga0070691_10248063 3300005341 Bacteria 954
15 Ga0070661_100291818 3300005344 Bacteria 1267
16 Ga0070661_101136237 3300005344 Bacteria 652
17 Ga0070692_10101814 3300005345 Bacteria 1576
18 Ga0070692_10230319 3300005345 Bacteria 1100
19 Ga0070692_10481228 3300005345 Bacteria 801
20 Ga0070668_100159968 3300005347 Bacteria 1827
21 Ga0070668_100225749 3300005347 Bacteria 1546
22 Ga0070671_100212076 3300005355 Bacteria 1642
23 Ga0070674_100483039 3300005356 Bacteria 1028
24 Ga0070701_10052349 3300005438 Bacteria 2121
25 Ga0070701_10350689 3300005438 Bacteria 922
26 Ga0070701_10802507 3300005438 Unclassified 642
27 Ga0070705_100751437 3300005440 Bacteria 771
28 Ga0070663_100216586 3300005455 Bacteria 1502
29 Ga0070663_100381128 3300005455 Bacteria 1149
30 Ga0070678_100178385 3300005456 Bacteria 1736
31 Ga0070678_100220617 3300005456 Bacteria 1576
32 Ga0070678_100704475 3300005456 Unclassified 910
33 Ga0070678_100741511 3300005456 Bacteria 888
34 Ga0070662_100235279 3300005457 Bacteria 1467
35 Ga0068867_100086885 3300005459 Bacteria 2367
36 Ga0068867_100245159 3300005459 Bacteria 1455
37 Ga0070684_100130174 3300005535 Bacteria 2270
38 Ga0068853_100231987 3300005539 Bacteria 1689
39 Ga0068853_100631102 3300005539 Bacteria 1019
40 Ga0070672_100092725 3300005543 Bacteria 2439
41 Ga0070686_100137187 3300005544 Bacteria 1698
42 Ga0070665_101157327 3300005548 Bacteria 785
43 Ga0070664_100091885 3300005564 Bacteria 2627
44 Ga0070664_100233294 3300005564 Bacteria 1650
45 Ga0070664_100619396 3300005564 Bacteria 1004
46 Ga0070664_100674295 3300005564 Bacteria 962
47 Ga0068857_100288186 3300005577 Bacteria 1511
48 Ga0068857_100846786 3300005577 Bacteria 875
49 Ga0068854_100224862 3300005578 Bacteria 1487
50 Ga0068854_100761990 3300005578 Bacteria 841
51 Ga0068852_100087879 3300005616 Bacteria 2774
52 Ga0068852_100221248 3300005616 Bacteria 1800
53 Ga0068852_100281064 3300005616 Bacteria 1604
54 Ga0068852_100318487 3300005616 Bacteria 1510
55 Ga0068859_100824355 3300005617 Bacteria 1014
56 Ga0068864_100091651 3300005618 Bacteria 2682
57 Ga0068866_10085971 3300005718 Bacteria 1701
58 Ga0068866_10562909 3300005718 Bacteria 764
59 Ga0068861_100025996 3300005719 Bacteria 4251
60 Ga0068851_10036564 3300005834 Bacteria 2459
61 Ga0068870_10130557 3300005840 Bacteria 1459
62 Ga0068863_101102031 3300005841 Bacteria 798
63 Ga0068858_100383420 3300005842 Bacteria 1349
64 Ga0068858_100885598 3300005842 Unclassified 873
65 Ga0068860_100596240 3300005843 Bacteria 1110
66 Ga0068862_100207383 3300005844 Bacteria 1769
67 Ga0075368_10328849 3300006042 Unclassified 663
68 Ga0097621_100210446 3300006237 Bacteria 1692
69 Ga0075428_100328588 3300006844 Bacteria 1643
70 Ga0075428_101078583 3300006844 Bacteria 849
71 Ga0075434_100410139 3300006871 Bacteria 1376
72 Ga0068865_100175236 3300006881 Bacteria 1647
73 Ga0097620_100824381 3300006931 Bacteria 1014
74 Ga0111539_10071870 3300009094 Bacteria 4082
75 Ga0111539_10555211 3300009094 Bacteria 1337
76 Ga0105245_10004824 3300009098 Bacteria 11891
77 Ga0105245_10681673 3300009098 Bacteria 1060
78 Ga0105243_10295927 3300009148 Bacteria 1465
79 Ga0105241_10448679 3300009174 Bacteria 1141
80 Ga0105241_11149627 3300009174 Bacteria 733
81 Ga0105242_10044958 3300009176 Bacteria 3577
82 Ga0105248_10904615 3300009177 Bacteria 996
83 Ga0105237_10917956 3300009545 Bacteria 883
84 Ga0105249_10489718 3300009553 Bacteria 1273
85 Ga0105249_10789487 3300009553 Bacteria 1013
86 Ga0105239_10331526 3300010375 Bacteria 1717
87 Ga0105239_10379128 3300010375 Bacteria 1599
88 Ga0105246_10221711 3300011119 Bacteria 1483
89 Ga0105246_11391033 3300011119 Bacteria 654
90 Ga0157371_10529653 3300013102 Bacteria 872
91 Ga0157374_10512196 3300013296 Bacteria 1205
92 Ga0157378_10152063 3300013297 Bacteria 2157
93 Ga0163162_10623436 3300013306 Bacteria 1203
94 Ga0163162_11253319 3300013306 Bacteria 842
95 Ga0157372_10082416 3300013307 Bacteria 3642
96 Ga0163163_10667089 3300014325 Bacteria 1103
97 Ga0163163_11386973 3300014325 Bacteria 764
98 Ga0157380_10649667 3300014326 Bacteria 1052
99 Ga0157380_11221530 3300014326 Bacteria 796
100 Ga0157379_10421897 3300014968 Bacteria 1229
101 Ga0163161_10750864 3300017792 Bacteria 816
102 Ga0206353_10165296 3300020082 Bacteria 1250
103 Ga0207656_10057252 3300025321 Bacteria 1700
104 Ga0207642_10215821 3300025899 Bacteria 1069
105 Ga0207642_10359268 3300025899 Bacteria 861
106 Ga0207688_10043768 3300025901 Bacteria 2494
107 Ga0207688_10177575 3300025901 Bacteria 1269
108 Ga0207688_10323211 3300025901 Bacteria 947
109 Ga0207647_10197023 3300025904 Bacteria 1166
110 Ga0207647_10271137 3300025904 Bacteria 970
111 Ga0207643_10012703 3300025908 Bacteria 4551
112 Ga0207657_10142743 3300025919 Bacteria 1956
113 Ga0207657_10248807 3300025919 Unclassified 1418
114 Ga0207652_10338271 3300025921 Bacteria 1359
115 Ga0207681_10411857 3300025923 Bacteria 1094
116 Ga0207687_10021315 3300025927 Bacteria 4305
117 Ga0207687_10063726 3300025927 Bacteria 2611
118 Ga0207644_10232276 3300025931 Bacteria 1466
119 Ga0207706_10270950 3300025933 Bacteria 1481
120 Ga0207706_10447528 3300025933 Bacteria 1117
121 Ga0207706_10457308 3300025933 Bacteria 1104
122 Ga0207686_10037229 3300025934 Bacteria 2934
123 Ga0207669_10465883 3300025937 Bacteria 1004
124 Ga0207704_10216592 3300025938 Bacteria 1413
125 Ga0207704_10502368 3300025938 Bacteria 977
126 Ga0207691_10285682 3300025940 Bacteria 1419
127 Ga0207689_10312987 3300025942 Bacteria 1302
128 Ga0207661_10073015 3300025944 Bacteria 2809
129 Ga0207661_11223305 3300025944 Bacteria 691
130 Ga0207679_10046128 3300025945 Bacteria 3157
131 Ga0207712_10091128 3300025961 Bacteria 2245
132 Ga0207668_10138647 3300025972 Bacteria 1867
133 Ga0207640_10245195 3300025981 Bacteria 1387
134 Ga0207658_11378866 3300025986 Bacteria 645
135 Ga0207677_10065120 3300026023 Bacteria 2541
136 Ga0207677_10104597 3300026023 Bacteria 2093
137 Ga0207703_10268100 3300026035 Bacteria 1546
138 Ga0207639_10128577 3300026041 Bacteria 2093
139 Ga0207678_10067585 3300026067 Bacteria 3068
140 Ga0207678_10078787 3300026067 Bacteria 2822
141 Ga0207708_10017730 3300026075 Bacteria 5359
142 Ga0207708_10353874 3300026075 Bacteria 1205
143 Ga0207708_10403242 3300026075 Bacteria 1131
144 Ga0207648_10017613 3300026089 Bacteria 6489
145 Ga0207648_10064162 3300026089 Bacteria 3201
146 Ga0207648_10298755 3300026089 Bacteria 1444
147 Ga0207676_10052772 3300026095 Bacteria 3180
148 Ga0207676_10111965 3300026095 Bacteria 2286
149 Ga0207674_10439809 3300026116 Unclassified 1260
150 Ga0207675_100020526 3300026118 Bacteria 6158
151 Ga0207675_100420395 3300026118 Unclassified 1320
152 Ga0207675_100499151 3300026118 Bacteria 1211
153 Ga0207683_10026078 3300026121 Bacteria 5047
154 Ga0207683_10615870 3300026121 Unclassified 1005
155 Ga0207683_10948933 3300026121 Bacteria 799
156 Ga0207698_10385457 3300026142 Bacteria 1335
157 Ga0209813_10272890 3300027866 Unclassified 649
158 Ga0268266_10363661 3300028379 Bacteria 1362
159 Ga0268265_10199948 3300028380 Bacteria 1733
160 Ga0268265_10719251 3300028380 Bacteria 966
161 Ga0268264_11628082 3300028381 Unclassified 656
162 Ga0310981_1001819 3300029285 Bacteria 603
163 Ga0307408_100314033 3300031548 Bacteria 1318
164 Ga0307413_10886605 3300031824 Bacteria 757
165 Ga0307410_10777013 3300031852 Unclassified 813
166 Ga0307406_10078696 3300031901 Bacteria 2185
167 Ga0307406_10171400 3300031901 Bacteria 1571
168 Ga0307406_11032516 3300031901 Bacteria 707
169 Ga0307412_10868951 3300031911 Unclassified 788
170 Ga0307409_100253388 3300031995 Bacteria 1611
171 Ga0307409_100527225 3300031995 Bacteria 1155
172 Ga0307409_100831931 3300031995 Bacteria 933
173 Ga0307409_101723454 3300031995 Unclassified 655
174 Ga0307416_100401078 3300032002 Bacteria 1409
175 Ga0307416_100449943 3300032002 Bacteria 1340
176 Ga0307416_100647756 3300032002 Bacteria 1141
177 Ga0307416_101031647 3300032002 Unclassified 926
178 Ga0307415_100043623 3300032126 Bacteria 2993
179 Ga0307415_100086405 3300032126 Bacteria 2257
180 Ga0373946_0267568 3300035171 Unclassified 838
181 Ga0395900_0180605 3300037418 Bacteria 2145
182 Ga0395898_0176639 3300037466 Bacteria 2041
183 Ga0451791_1336392 3300041451 Bacteria 2870
184 Ga0451807_0929463 3300041486 Bacteria 1158
185 Ga0451841_0018956 3300041498 Bacteria 945
186 Ga0451847_0232721 3300041503 Bacteria 691
187 Ga0451853_0371502 3300041512 Bacteria 1035
188 Ga0466967_0420047 3300045976 Bacteria 1303
189 Ga0495584_0291406 3300046491 Bacteria 829
190 Ga0495663_0341861 3300046525 Bacteria 544
191 Ga0495589_0363419 3300046794 Bacteria 666
192 Ga0496100_0473626 3300048903 Bacteria 962
193 Ga0496100_0538343 3300048903 Bacteria 902
194 Ga0496101_0361305 3300048904 Bacteria 1141
195 Ga0496106_0162703 3300048909 Bacteria 1765
196 Ga0496106_0221915 3300048909 Bacteria 1507
197 Ga0496106_0873069 3300048909 Bacteria 711
198 Ga0496107_0123364 3300048910 Bacteria 1909
199 Ga0496107_0149470 3300048910 Bacteria 1727
200 Ga0496108_0044605 3300048911 Bacteria 3701
201 Ga0496108_0102239 3300048911 Bacteria 2445
202 Ga0496108_0750315 3300048911 Bacteria 844
203 Ga0496109_0020362 3300048912 Bacteria 5858
204 Ga0496109_0230743 3300048912 Bacteria 1741
205 Ga0496110_0312348 3300048913 Bacteria 1431
206 Ga0496110_0641547 3300048913 Bacteria 961
207 Ga0496110_0800102 3300048913 Bacteria 847
208 Ga0496110_0820363 3300048913 Bacteria 835
209 Ga0496111_0043170 3300048914 Bacteria 3240
210 Ga0496112_0127406 3300048915 Bacteria 2516
211 Ga0496112_0217396 3300048915 Bacteria 1867
212 Ga0496113_0006564 3300048916 Bacteria 7388
213 Ga0496113_0469106 3300048916 Bacteria 1011
214 Ga0496115_1000398 3300048918 Bacteria 639
215 Ga0496119_0155244 3300048922 Bacteria 1223
216 Ga0501306_061859 3300049127 Unclassified 618
217 Ga0501306_062579 3300049127 Bacteria 615
218 Ga0501306_066741 3300049127 Bacteria 601
219 Ga0501306_067195 3300049127 Unclassified 600
220 Ga0501309_050680 3300049129 Bacteria 651
221 Ga0501309_061748 3300049129 Bacteria 604
222 Ga0501309_063567 3300049129 Unclassified 597
223 Ga0501309_066739 3300049129 Unclassified 586
224 Ga0501309_067797 3300049129 Bacteria 583
225 Ga0501310_020768 3300049130 Bacteria 818
226 Ga0501310_034352 3300049130 Bacteria 685
227 Ga0501310_042346 3300049130 Bacteria 638
228 Ga0501310_051437 3300049130 Unclassified 597
229 Ga0501310_053177 3300049130 Unclassified 590
230 Ga0501305_053043 3300049161 Bacteria 684
231 Ga0501307_039405 3300049162 Unclassified 682
232 Ga0501307_052960 3300049162 Bacteria 614
233 Ga0501311_060260 3300049527 Bacteria 612
234 Ga0501312_077183 3300049528 Bacteria 598
235 Ga0501312_079341 3300049528 Unclassified 592
236 Ga0501312_079626 3300049528 Bacteria 591
237 Ga0501317_058158 3300049533 Bacteria 629
238 Ga0501321_034805 3300049537 Unclassified 688
239 Ga0501321_041245 3300049537 Unclassified 650
240 Ga0501040_0363471 3300049576 Bacteria 1037
241 Ga0501042_0232659 3300049578 Bacteria 1329
242 Ga0501072_0971517 3300049588 Bacteria 662
243 nmdc:mga0yw44_326226_c1 3300050492 Bacteria 1031
244 nmdc:mga08y16_669175_c1 3300050511 Bacteria 1040
245 nmdc:mga08y16_787977_c1 3300050511 Unclassified 944
246 nmdc:mga08y16_913530_c1 3300050511 Unclassified 863
247 nmdc:mga0n895_301484_c1 3300050512 Bacteria 1624
248 Ga0500641_0273612 3300053096 Bacteria 702
249 Ga0500568_0093843 3300053139 Bacteria 1130
250 Ga0111539_11684397
251 Ga0058858_1353865
252 Ga0070683_100237171
253 Ga0070683_100451418
254 Ga0068869_100200423
255 Ga0068869_100640095
256 Ga0070682_100179824
257 Ga0070682_100287139
258 Ga0068868_100024415
259 Ga0068868_100344419
260 Ga0068868_100898919
261 Ga0070660_100606446
262 Ga0070689_100498797
263 Ga0070691_10248063
264 Ga0070661_100291818
265 Ga0070661_101136237
266 Ga0070692_10101814
267 Ga0070692_10230319
268 Ga0070692_10481228
269 Ga0070668_100159968
270 Ga0070668_100225749
271 Ga0070671_100212076
272 Ga0070674_100483039
273 Ga0070701_10052349
274 Ga0070701_10350689
275 Ga0070701_10802507
276 Ga0070705_100751437
277 Ga0070663_100216586
278 Ga0070663_100381128
279 Ga0070678_100178385
280 Ga0070678_100220617
281 Ga0070678_100704475
282 Ga0070678_100741511
283 Ga0070662_100235279
284 Ga0068867_100086885
285 Ga0068867_100245159
286 Ga0070684_100130174
287 Ga0068853_100231987
288 Ga0068853_100631102
289 Ga0070672_100092725
290 Ga0070686_100137187
291 Ga0070665_101157327
292 Ga0070664_100091885
293 Ga0070664_100233294
294 Ga0070664_100619396
295 Ga0070664_100674295
296 Ga0068857_100288186
297 Ga0068857_100846786
298 Ga0068854_100224862
299 Ga0068854_100761990
300 Ga0068852_100087879
301 Ga0068852_100221248
302 Ga0068852_100281064
303 Ga0068852_100318487
304 Ga0068859_100824355
305 Ga0068864_100091651
306 Ga0068866_10085971
307 Ga0068866_10562909
308 Ga0068861_100025996
309 Ga0068851_10036564
310 Ga0068870_10130557
311 Ga0068863_101102031
312 Ga0068858_100383420
313 Ga0068858_100885598
314 Ga0068860_100596240
315 Ga0068862_100207383
316 Ga0075368_10328849
317 Ga0097621_100210446
318 Ga0075428_100328588
319 Ga0075428_101078583
320 Ga0075434_100410139
321 Ga0068865_100175236
322 Ga0097620_100824381
323 Ga0111539_10071870
324 Ga0111539_10555211
325 Ga0105245_10004824
326 Ga0105245_10681673
327 Ga0105243_10295927
328 Ga0105241_10448679
329 Ga0105241_11149627
330 Ga0105242_10044958
331 Ga0105248_10904615
332 Ga0105237_10917956
333 Ga0105249_10489718
334 Ga0105249_10789487
335 Ga0105239_10331526
336 Ga0105239_10379128
337 Ga0105246_10221711
338 Ga0105246_11391033
339 Ga0157371_10529653
340 Ga0157374_10512196
341 Ga0157378_10152063
342 Ga0163162_10623436
343 Ga0163162_11253319
344 Ga0157372_10082416
345 Ga0163163_10667089
346 Ga0163163_11386973
347 Ga0157380_10649667
348 Ga0157380_11221530
349 Ga0157379_10421897
350 Ga0163161_10750864
351 Ga0206353_10165296
352 Ga0207656_10057252
353 Ga0207642_10215821
354 Ga0207642_10359268
355 Ga0207688_10043768
356 Ga0207688_10177575
357 Ga0207688_10323211
358 Ga0207647_10197023
359 Ga0207647_10271137
360 Ga0207643_10012703
361 Ga0207657_10142743
362 Ga0207657_10248807
363 Ga0207652_10338271
364 Ga0207681_10411857
365 Ga0207687_10021315
366 Ga0207687_10063726
367 Ga0207644_10232276
368 Ga0207706_10270950
369 Ga0207706_10447528
370 Ga0207706_10457308
371 Ga0207686_10037229
372 Ga0207669_10465883
373 Ga0207704_10216592
374 Ga0207704_10502368
375 Ga0207691_10285682
376 Ga0207689_10312987
377 Ga0207661_10073015
378 Ga0207661_11223305
379 Ga0207679_10046128
380 Ga0207712_10091128
381 Ga0207668_10138647
382 Ga0207640_10245195
383 Ga0207658_11378866
384 Ga0207677_10065120
385 Ga0207677_10104597
386 Ga0207703_10268100
387 Ga0207639_10128577
388 Ga0207678_10067585
389 Ga0207678_10078787
390 Ga0207708_10017730
391 Ga0207708_10353874
392 Ga0207708_10403242
393 Ga0207648_10017613
394 Ga0207648_10064162
395 Ga0207648_10298755
396 Ga0207676_10052772
397 Ga0207676_10111965
398 Ga0207674_10439809
399 Ga0207675_100020526
400 Ga0207675_100420395
401 Ga0207675_100499151
402 Ga0207683_10026078
403 Ga0207683_10615870
404 Ga0207683_10948933
405 Ga0207698_10385457
406 Ga0209813_10272890
407 Ga0268266_10363661
408 Ga0268265_10199948
409 Ga0268265_10719251
410 Ga0268264_11628082
411 Ga0310981_1001819
412 Ga0307408_100314033
413 Ga0307413_10886605
414 Ga0307410_10777013
415 Ga0307406_10078696
416 Ga0307406_10171400
417 Ga0307406_11032516
418 Ga0307412_10868951
419 Ga0307409_100253388
420 Ga0307409_100527225
421 Ga0307409_100831931
422 Ga0307409_101723454
423 Ga0307416_100401078
424 Ga0307416_100449943
425 Ga0307416_100647756
426 Ga0307416_101031647
427 Ga0307415_100043623
428 Ga0307415_100086405
429 Ga0373946_0267568
430 Ga0395900_0180605
431 Ga0395898_0176639
432 Ga0451791_1336392
433 Ga0451807_0929463
434 Ga0451841_0018956
435 Ga0451847_0232721
436 Ga0451853_0371502
437 Ga0466967_0420047
438 Ga0495584_0291406
439 Ga0495663_0341861
440 Ga0495589_0363419
441 Ga0496100_0473626
442 Ga0496100_0538343
443 Ga0496101_0361305
444 Ga0496106_0162703
445 Ga0496106_0221915
446 Ga0496106_0873069
447 Ga0496107_0123364
448 Ga0496107_0149470
449 Ga0496108_0044605
450 Ga0496108_0102239
451 Ga0496108_0750315
452 Ga0496109_0020362
453 Ga0496109_0230743
454 Ga0496110_0312348
455 Ga0496110_0641547
456 Ga0496110_0800102
457 Ga0496110_0820363
458 Ga0496111_0043170
459 Ga0496112_0127406
460 Ga0496112_0217396
461 Ga0496113_0006564
462 Ga0496113_0469106
463 Ga0496115_1000398
464 Ga0496119_0155244
465 Ga0501306_061859
466 Ga0501306_062579
467 Ga0501306_066741
468 Ga0501306_067195
469 Ga0501309_050680
470 Ga0501309_061748
471 Ga0501309_063567
472 Ga0501309_066739
473 Ga0501309_067797
474 Ga0501310_020768
475 Ga0501310_034352
476 Ga0501310_042346
477 Ga0501310_051437
478 Ga0501310_053177
479 Ga0501305_053043
480 Ga0501307_039405
481 Ga0501307_052960
482 Ga0501311_060260
483 Ga0501312_077183
484 Ga0501312_079341
485 Ga0501312_079626
486 Ga0501317_058158
487 Ga0501321_034805
488 Ga0501321_041245
489 Ga0501040_0363471
490 Ga0501042_0232659
491 Ga0501072_0971517
492 nmdc:mga0yw44_326226_c1
493 nmdc:mga08y16_669175_c1
494 nmdc:mga08y16_787977_c1
495 nmdc:mga08y16_913530_c1
496 nmdc:mga0n895_301484_c1
497 Ga0500641_0273612
498 Ga0500568_0093843

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
7uea-assembly1.cif.gz_A photosynthetic assembly of chlorobaculum tepidum (rc-fmo1) 0.5761 9 161
1jch-assembly1.cif.gz_A crystal structure of colicin e3 in complex with its immunity protein 0.5579 6 164
2b5u-assembly2.cif.gz_C crystal structure of colicin e3 v206c mutant in complex with its immunity protein 0.528 6 163
2ysu-assembly1.cif.gz_B structure of the complex between btub and colicin e2 receptor binding domain 0.513 1 165
1ujw-assembly1.cif.gz_B structure of the complex between btub and colicin e3 receptor binding domain 0.5094 6 163
ID Description Score Start End Superfamily
af_Q9VW56_6_121_1.10.287.370 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.5848 6 164 1.10.287.370
2b5uA02 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix Hairpins 0.5691 6 163 1.10.287.620
1jchC02 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix Hairpins 0.5579 6 164 1.10.287.620
af_Q9VW56_6_121_1.10.287.370 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.5556 6 164 1.10.287.370
3oaaG01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;ATP synthase, gamma subunit, helix hairpin domain 0.5363 3 178 1.10.287.80
ID Description Score Start End GO Terms
AF-A0A538AE56-F1-model_v4 Uncharacterized protein 0.9742 3 167 GO:0016020
AF-A0A021VPK0-F1-model_v4 LigA 0.9505 6 161 GO:0016020
AF-A0A7Y6CVY5-F1-model_v4 Aromatic ring-opening dioxygenase LigA 0.9495 1 161 GO:0016020
AF-A0A7M2YVJ8-F1-model_v4 Aromatic ring-opening dioxygenase LigA 0.9423 3 165 GO:0016020
AF-A0A4Q4Z2T2-F1-model_v4 Aromatic ring-opening dioxygenase LigA 0.9399 9 157 GO:0016020
GO:0051213

Map