F360335

General Info

Members Datasets Scaffolds Average Seq Length
248 227 84 454

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2885312484|2885313498
Length 474
Sequence ETEPKVSDFSQIDFTNGVLAAVSGGSDSTALLLLLKDHLDRTAPATKLLAVTIDHGLRPGAAAEAQAVARLCAGRGIAHRILVWSGRKPSTGLPAAAREARYRLLAEAARAEGIGLILTGHTADDQAETVLMRQVRDDGARDGGRGLAGMAPATLYDWRIWIARPLLGTRRATLRDVLRRANVGWAEDPTNEDEAFERPRIRAALADGNGAQRMGDAIALAARAAVEREQLGHRAAALIRGFASKPADGLIRLDPGFAAAGDEPAAVYALRILLATVGGVAFLPDQARSEALLDRLRAGPFGSIPFCATPFCATLSRTVVDARRTGIFLRRETRNLPPAAPAADNALWDGRRRITLGDKPGAFLIAPPLIAPLGAARAAKRAIADDGTPPSLVRAALAAEPALWRSSEYLSEYPGECLGLVQDSRVSSRMAACPVVAPFARFLPSFDLAPARTVAALIGAPLVPAVPFSGHTAG

Samples

Sample ID Description Type Environment
1 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
2 2508501127 Mesorhizobium sp. WSM2561 Isolate Nodule
3 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
4 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
5 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
6 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
7 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
8 2597489875 Mesorhizobium ciceri ca181 Isolate Unclassified
9 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
10 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
11 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
12 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
13 2693429783 Mesorhizobium sp. LCM 4577 Isolate Rhizosphere
14 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
15 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
16 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
17 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
18 2847670302 Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1 Isolate Nodule
19 2847686936 Mesorhizobium sp. M1A.F.Ca.IN.022.06.1.1 Isolate Nodule
20 2856314179 Mesorhizobium sp. M3A.F.Ca.ET.175.01.1.1 Isolate Nodule
21 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
22 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
23 2856356410 Mesorhizobium sp. M4B.F.Ca.ET.088.02.2.1 Isolate Nodule
24 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
25 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
26 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
27 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
28 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
29 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
30 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
31 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
32 2874102143 Mesorhizobium sp. M1A.F.Ca.IN.022.04.1.1 Isolate Nodule
33 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
34 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
35 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
36 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
37 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
38 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
39 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
40 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
41 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
42 2878035449 Mesorhizobium sp. M3A.F.Ca.ET.201.01.1.1 Isolate Nodule
43 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
44 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
45 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
46 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
47 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
48 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
49 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
50 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
51 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
52 2881853255 Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 Isolate Nodule
53 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
54 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
55 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
56 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
57 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
58 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
59 2885326080 Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 Isolate Nodule
60 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
61 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
62 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
63 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
64 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
65 2889016732 Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 Isolate Nodule
66 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
67 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
68 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
69 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
70 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
71 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
72 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
73 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
74 2906328253 Mesorhizobium sp. M1A.T.Ca.IN.004.03.1.1 Isolate Nodule
75 2906354277 Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 Isolate Nodule
76 2906414383 Mesorhizobium sp. M3A.F.Ca.ET.174.01.1.1 Isolate Nodule
77 2922130491 Mesorhizobium sp. M00.F.Ca.ET.038.03.1.1 Isolate Nodule
78 2922158528 Mesorhizobium sp. M1A.F.Ca.IN.022.05.2.1 Isolate Nodule
79 2922185730 Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 Isolate Nodule
80 2924718760 Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 Isolate Nodule
81 2924726620 Mesorhizobium sp. M1A.F.Ca.IN.020.03.2.1 Isolate Nodule
82 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
83 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
84 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
85 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
86 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
87 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
88 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
89 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
90 2937891427 Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 Isolate Nodule
91 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
92 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
93 2938014810 Mesorhizobium sp. M2C.T.Ca.TU.002.02.1.1 Isolate Nodule
94 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
95 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
96 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
97 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
98 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
99 2958100919 Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 Isolate Nodule
100 2958115193 Mesorhizobium sp. M00.F.Ca.ET.217.01.1.1 Isolate Nodule
101 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
102 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
103 2958172287 Mesorhizobium sp. M2A.F.Ca.ET.029.05.1.1 Isolate Nodule
104 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
105 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
106 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
107 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
108 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
109 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
110 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
111 2965062239 Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 Isolate Nodule
112 2965119406 Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1 Isolate Nodule
113 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
114 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
115 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
116 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
117 2968091066 Mesorhizobium sp. AA23 Isolate Unclassified
118 2968097103 Mesorhizobium sp. M1A.F.Ca.IN.020.30.1.1 Isolate Nodule
119 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
120 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
121 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
122 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
123 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
124 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
125 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
126 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
127 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
128 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
129 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
130 2977828996 Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 Isolate Nodule
131 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
132 2977858184 Mesorhizobium sp. M1A.F.Ca.IN.020.03.1.1 Isolate Nodule
133 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
134 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
135 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
136 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
137 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
138 2979710463 Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 Isolate Nodule
139 2979779861 Mesorhizobium sp. M1A.F.Ca.IN.022.02.1.1 Isolate Nodule
140 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
141 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
142 2987652177 Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 Isolate Nodule
143 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
144 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
145 2996341866 Mesorhizobium sp. M1A.F.Ca.IN.020.32.1.1 Isolate Nodule
146 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
147 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
148 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
149 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
150 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
151 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
152 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
153 3004289098 Mesorhizobium sp. M8A.F.Ca.ET.023.02.2.1 Isolate Nodule
154 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
155 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
156 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
157 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
158 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
159 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
160 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
161 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
162 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
163 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
164 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
165 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
166 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
167 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
168 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
169 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
170 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
171 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
172 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
173 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
174 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
175 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
176 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
177 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
178 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
180 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
181 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
182 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
183 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
184 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
185 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
186 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
187 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
188 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
189 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
190 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
193 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
198 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
199 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
200 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
201 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
203 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
204 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
205 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
206 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
207 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
208 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
209 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
210 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
212 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
213 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
214 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
215 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
216 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
217 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
218 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
219 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
220 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
221 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
222 8004445564 Mesorhizobium sp. M1A.F.Ca.IN.020.04.1.1 Isolate Nodule
223 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
224 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified
225 8004703790 Mesorhizobium sp. M00.F.Ca.ET.158.01.1.1 Isolate Nodule
226 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
227 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 33.87
Metatranscriptomes 0
Isolates 66.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.06
Nodule 55.24
Rhizoplane 0.81
Rhizosphere 24.6
Stem 0
Stem Tuber 0
Unclassified 11.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10014790 3300003203 Bacteria 3310
2 Ga0070658_10144766 3300005327 Bacteria 1987
3 Ga0070682_100116827 3300005337 Bacteria 1785
4 Ga0070660_100042283 3300005339 Bacteria 3477
5 Ga0070674_100142501 3300005356 Bacteria 1800
6 Ga0068853_100004748 3300005539 Bacteria 10562
7 Ga0068853_100198135 3300005539 Bacteria 1827
8 Ga0070665_100158210 3300005548 Bacteria 2267
9 Ga0081539_10001347 3300005985 Bacteria 42775
10 Ga0075365_10015365 3300006038 Bacteria 4630
11 Ga0075365_10018901 3300006038 Bacteria 4244
12 Ga0075363_100044997 3300006048 Bacteria 2340
13 Ga0075362_10042255 3300006177 Bacteria 2014
14 Ga0075367_10105287 3300006178 Bacteria 1727
15 Ga0075369_10016420 3300006186 Bacteria 2987
16 Ga0075369_10026334 3300006186 Bacteria 2423
17 Ga0105243_10069701 3300009148 Bacteria 2837
18 Ga0105241_10061062 3300009174 Bacteria 2902
19 Ga0105237_10019889 3300009545 Bacteria 6930
20 Ga0105237_10123853 3300009545 Bacteria 2580
21 Ga0105237_10159086 3300009545 Bacteria 2256
22 Ga0105238_10005198 3300009551 Bacteria 12862
23 Ga0105239_10245229 3300010375 Bacteria 2011
24 Ga0105239_10371277 3300010375 Bacteria 1617
25 Ga0209026_1000041 3300025250 Bacteria 275745
26 Ga0209148_1000317 3300025254 Bacteria 67724
27 Ga0209759_1000168 3300025256 Bacteria 111106
28 Ga0209455_1000152 3300025272 Bacteria 125942
29 Ga0209758_1007403 3300025297 Bacteria 7491
30 Ga0207705_10057355 3300025909 Bacteria 2808
31 Ga0207709_10048340 3300025935 Bacteria 2591
32 Ga0207669_10177191 3300025937 Bacteria 1524
33 Ga0207639_10054983 3300026041 Bacteria 3045
34 Ga0207702_10134833 3300026078 Bacteria 2226
35 Ga0207648_10092882 3300026089 Bacteria 2639
36 Ga0395900_0209883 3300037418 Bacteria 1967
37 Ga0395900_0292247 3300037418 Bacteria 1618
38 Ga0395905_0051259 3300037471 Bacteria 3865
39 Ga0439438_029629 3300041405 Bacteria 1464
40 Ga0496102_0244290 3300048905 Bacteria 1693
41 Ga0496120_0013876 3300048923 Bacteria 5395
42 Ga0496125_0074913 3300048928 Bacteria 2622
43 Ga0496126_0040897 3300048929 Bacteria 4295
44 Ga0501031_0000034 3300049568 Bacteria 75416
45 Ga0501032_0000006 3300049569 Bacteria 261727
46 Ga0501032_0011374 3300049569 Bacteria 6391
47 Ga0501032_0089398 3300049569 Bacteria 2045
48 Ga0501033_0001218 3300049570 Bacteria 23085
49 Ga0501033_0011809 3300049570 Bacteria 6676
50 Ga0501033_0076360 3300049570 Bacteria 2459
51 Ga0501034_0000030 3300049571 Bacteria 248180
52 Ga0501034_0017556 3300049571 Bacteria 7338
53 Ga0501034_0040924 3300049571 Bacteria 4689
54 Ga0501036_0000003 3300049572 Bacteria 261545
55 Ga0501037_0000003 3300049573 Bacteria 261548
56 Ga0501038_0000004 3300049574 Bacteria 261289
57 Ga0501039_0000008 3300049575 Bacteria 274778
58 Ga0501042_0064656 3300049578 Bacteria 2614
59 Ga0501043_0040107 3300049579 Bacteria 3680
60 Ga0501046_0011936 3300049580 Bacteria 7412
61 Ga0501047_0006631 3300049581 Bacteria 10887
62 Ga0501047_0016606 3300049581 Bacteria 7027
63 Ga0501048_0004446 3300049582 Bacteria 10683
64 Ga0501068_0005629 3300049584 Bacteria 6865
65 Ga0501070_0008147 3300049586 Bacteria 8863
66 Ga0501073_0016530 3300049589 Bacteria 5349
67 Ga0501074_0023617 3300049590 Bacteria 4469
68 Ga0501080_0014067 3300049742 Bacteria 7365
69 Ga0501083_0030235 3300049744 Bacteria 3722
70 Ga0501035_0000031 3300049822 Bacteria 175591
71 Ga0501035_0033257 3300049822 Bacteria 4689
72 Ga0501044_0000008 3300049823 Bacteria 274778
73 Ga0501044_0061159 3300049823 Bacteria 3853
74 Ga0501045_0005470 3300049824 Bacteria 8792
75 nmdc:mga0yw44_22514_c1 3300050492 Bacteria 3535
76 nmdc:mga0yw44_36565_c1 3300050492 Bacteria 2894
77 nmdc:mga07m45_39666_c1 3300050496 Bacteria 2632
78 Ga0500610_0017471 3300053079 Bacteria 3447
79 Ga0500595_032542 3300053119 Bacteria 1740
80 Ga0500568_0033051 3300053139 Bacteria 2125
81 Ga0500620_000517 3300053155 Bacteria 6763
82 Ga0500620_049394 3300053155 Bacteria 1406
83 Ga0500627_0043267 3300053158 Bacteria 1941
84 Ga0500627_0050072 3300053158 Bacteria 1818

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2958172287 2958177918 338
2 3300048905 Ga0496102_0244290 Ga0496102_0244290_506_1645 339
3 3300053155 Ga0500620_049394 Ga0500620_049394_30_1205 342
4 3300053158 Ga0500627_0043267 Ga0500627_0043267_15_1319 362
5 iso_pu_bacteria 2970540015 2970541195 382
6 3300049570 Ga0501033_0011809 Ga0501033_0011809_4293_5642 389
7 3300049571 Ga0501034_0017556 Ga0501034_0017556_1697_3046 389
8 3300049582 Ga0501048_0004446 Ga0501048_0004446_4459_5808 389
9 3300049586 Ga0501070_0008147 Ga0501070_0008147_336_1685 389
10 3300049589 Ga0501073_0016530 Ga0501073_0016530_1452_2801 389
11 3300049590 Ga0501074_0023617 Ga0501074_0023617_854_2203 389
12 3300049742 Ga0501080_0014067 Ga0501080_0014067_1519_2868 389
13 3300049744 Ga0501083_0030235 Ga0501083_0030235_1513_2862 389
14 3300049824 Ga0501045_0005470 Ga0501045_0005470_4663_6012 389
15 3300049569 Ga0501032_0011374 Ga0501032_0011374_4293_5642 390
16 3300049578 Ga0501042_0064656 Ga0501042_0064656_425_1774 390
17 3300049581 Ga0501047_0016606 Ga0501047_0016606_1386_2735 390
18 3300049584 Ga0501068_0005629 Ga0501068_0005629_4715_6064 390
19 3300026089 Ga0207648_10092882 Ga0207648_100928822 392
20 iso_pu_bacteria 2874102143 2874104123 396
21 3300009545 Ga0105237_10159086 Ga0105237_101590862 400
22 3300041405 Ga0439438_029629 Ga0439438_029629_95_1453 402
23 3300049568 Ga0501031_0000034 Ga0501031_0000034_53042_54397 403
24 3300049569 Ga0501032_0000006 Ga0501032_0000006_96830_98185 403
25 3300049570 Ga0501033_0001218 Ga0501033_0001218_20790_22145 403
26 3300049571 Ga0501034_0000030 Ga0501034_0000030_136945_138300 403
27 3300049572 Ga0501036_0000003 Ga0501036_0000003_163543_164898 403
28 3300049573 Ga0501037_0000003 Ga0501037_0000003_163543_164898 403
29 3300049574 Ga0501038_0000004 Ga0501038_0000004_163543_164898 403
30 3300049575 Ga0501039_0000008 Ga0501039_0000008_163543_164898 403
31 3300049579 Ga0501043_0040107 Ga0501043_0040107_889_2244 403
32 3300049580 Ga0501046_0011936 Ga0501046_0011936_337_1692 403
33 3300049581 Ga0501047_0006631 Ga0501047_0006631_964_2319 403
34 3300049822 Ga0501035_0000031 Ga0501035_0000031_64356_65711 403
35 3300049823 Ga0501044_0000008 Ga0501044_0000008_163543_164898 403
36 3300053139 Ga0500568_0033051 Ga0500568_0033051_62_1456 403
37 iso_pu_bacteria 2508501127 2509142178 403
38 iso_pu_bacteria 2924762789 2924766682 404
39 iso_pu_bacteria 2937822353 2937828103 404
40 iso_pu_bacteria 2987666974 2987670973 404
41 3300053158 Ga0500627_0050072 Ga0500627_0050072_319_1680 406
42 iso_pu_bacteria 2643221564 2643836850 406
43 iso_pu_bacteria 3000135777 3000141610 406
44 iso_pu_bacteria 2503198000 2503199332 407
45 iso_pu_bacteria 2509276022 2509394260 407
46 iso_pu_bacteria 2512875016 2512933278 407
47 iso_pu_bacteria 2588253730 2588519347 407
48 iso_pu_bacteria 2791355123 2792750687 407
49 iso_pu_bacteria 2874139085 2874146392 407
50 iso_pu_bacteria 2876363079 2876364470 407
51 iso_pu_bacteria 2878738818 2878741441 407
52 iso_pu_bacteria 2903448605 2903455005 407
53 iso_pu_bacteria 2903521522 2903523455 407
54 iso_pu_bacteria 2903528002 2903529173 407
55 iso_pu_bacteria 2924718760 2924723343 407
56 iso_pu_bacteria 2924776078 2924779123 407
57 iso_pu_bacteria 2937848649 2937849402 407
58 iso_pu_bacteria 2937877337 2937883225 407
59 iso_pu_bacteria 2958041894 2958057564 407
60 iso_pu_bacteria 2958084443 2958090391 407
61 iso_pu_bacteria 2963644680 2963645927 407
62 iso_pu_bacteria 2968083720 2968089437 407
63 iso_pu_bacteria 2970593180 2970599981 407
64 iso_pu_bacteria 2977864932 2977868747 407
65 iso_pu_bacteria 2977922695 2977923681 407
66 iso_pu_bacteria 2977986579 2977988428 407
67 iso_pu_bacteria 2996348954 2996353325 407
68 iso_pu_bacteria 3004211236 3004212978 407
69 iso_pu_bacteria 3004218560 3004220657 407
70 iso_pu_bacteria 3004275668 3004280007 407
71 iso_pu_bacteria 3004289098 3004289200 407
72 iso_pu_bacteria 637000159 637076358 407
73 iso_pu_bacteria 8004640170 8004645750 407
74 3300006177 Ga0075362_10042255 Ga0075362_100422552 408
75 3300006186 Ga0075369_10016420 Ga0075369_100164202 408
76 3300048923 Ga0496120_0013876 Ga0496120_0013876_1191_2567 408
77 3300053079 Ga0500610_0017471 Ga0500610_0017471_1536_2918 408
78 iso_pu_bacteria 2513237305 2514417083 408
79 iso_pu_bacteria 2721755686 2723573720 408
80 iso_pu_bacteria 2856364286 2856366487 408
81 iso_pu_bacteria 2869285874 2869288102 408
82 iso_pu_bacteria 2871429161 2871429988 408
83 iso_pu_bacteria 2871495908 2871497781 408
84 iso_pu_bacteria 2874146452 2874151735 408
85 iso_pu_bacteria 2874155637 2874159367 408
86 iso_pu_bacteria 2874168670 2874176551 408
87 iso_pu_bacteria 2876369609 2876374291 408
88 iso_pu_bacteria 2876392853 2876396501 408
89 iso_pu_bacteria 2876413966 2876417786 408
90 iso_pu_bacteria 2878745973 2878749613 408
91 iso_pu_bacteria 2878760144 2878762004 408
92 iso_pu_bacteria 2878767105 2878768970 408
93 iso_pu_bacteria 2881161766 2881165981 408
94 iso_pu_bacteria 2881845957 2881849020 408
95 iso_pu_bacteria 2882632389 2882638346 408
96 iso_pu_bacteria 2882912400 2882913170 408
97 iso_pu_bacteria 2885305155 2885307463 408
98 iso_pu_bacteria 2885326080 2885328434 408
99 iso_pu_bacteria 2903492973 2903493842 408
100 iso_pu_bacteria 2903540706 2903542579 408
101 iso_pu_bacteria 2904659560 2904663277 408
102 iso_pu_bacteria 2906308376 2906310651 408
103 iso_pu_bacteria 2906321335 2906324714 408
104 iso_pu_bacteria 2906328253 2906333518 408
105 iso_pu_bacteria 2922158528 2922159825 408
106 iso_pu_bacteria 2924784321 2924790432 408
107 iso_pu_bacteria 2937813078 2937817478 408
108 iso_pu_bacteria 2937972304 2937979161 408
109 iso_pu_bacteria 2937994558 2937996432 408
110 iso_pu_bacteria 2938014810 2938016442 408
111 iso_pu_bacteria 2958034702 2958041070 408
112 iso_pu_bacteria 2958041894 2958055092 408
113 iso_pu_bacteria 2958064165 2958070043 408
114 iso_pu_bacteria 2958130278 2958132504 408
115 iso_pu_bacteria 2958165035 2958166902 408
116 iso_pu_bacteria 2958179912 2958182318 408
117 iso_pu_bacteria 2961077736 2961080163 408
118 iso_pu_bacteria 2961114664 2961118304 408
119 iso_pu_bacteria 2961163497 2961165372 408
120 iso_pu_bacteria 2965018300 2965020194 408
121 iso_pu_bacteria 2965062239 2965063455 408
122 iso_pu_bacteria 2968003550 2968004361 408
123 iso_pu_bacteria 2968016561 2968022664 408
124 iso_pu_bacteria 2968091066 2968091667 408
125 iso_pu_bacteria 2968110612 2968114365 408
126 iso_pu_bacteria 2968128360 2968133362 408
127 iso_pu_bacteria 2968171901 2968173773 408
128 iso_pu_bacteria 2970469710 2970475248 408
129 iso_pu_bacteria 2970503327 2970503967 408
130 iso_pu_bacteria 2970554993 2970556859 408
131 iso_pu_bacteria 2977843712 2977847765 408
132 iso_pu_bacteria 2977858184 2977858650 408
133 iso_pu_bacteria 2987659509 2987661379 408
134 iso_pu_bacteria 2996341866 2996344512 408
135 iso_pu_bacteria 3004188549 3004190428 408
136 iso_pu_bacteria 8004387939 8004389889 408
137 iso_pu_bacteria 8004714634 8004718286 408
138 3300053119 Ga0500595_032542 Ga0500595_032542_228_1625 409
139 3300053155 Ga0500620_000517 Ga0500620_000517_3495_4871 409
140 iso_pu_bacteria 2847670302 2847674378 409
141 iso_pu_bacteria 2847686936 2847690501 409
142 iso_pu_bacteria 2856314179 2856317706 409
143 iso_pu_bacteria 2856349417 2856350953 409
144 iso_pu_bacteria 2856356410 2856359877 409
145 iso_pu_bacteria 2871488783 2871489063 409
146 iso_pu_bacteria 2878035449 2878038765 409
147 iso_pu_bacteria 2878753008 2878756042 409
148 iso_pu_bacteria 2881147464 2881149148 409
149 iso_pu_bacteria 2881155292 2881160382 409
150 iso_pu_bacteria 2881853255 2881859165 409
151 iso_pu_bacteria 2881861095 2881865801 409
152 iso_pu_bacteria 2885318864 2885325153 409
153 iso_pu_bacteria 2885342637 2885345347 409
154 iso_pu_bacteria 2885350715 2885355379 409
155 iso_pu_bacteria 2903492973 2903495750 409
156 iso_pu_bacteria 2906414383 2906417771 409
157 iso_pu_bacteria 2924726620 2924726887 409
158 iso_pu_bacteria 2937891427 2937897868 409
159 iso_pu_bacteria 2958115193 2958116590 409
160 iso_pu_bacteria 2961170736 2961171370 409
161 iso_pu_bacteria 2967996073 2967996125 409
162 iso_pu_bacteria 2968097103 2968097304 409
163 iso_pu_bacteria 2977821940 2977825265 409
164 iso_pu_bacteria 2977828996 2977831133 409
165 iso_pu_bacteria 2977942078 2977950045 409
166 iso_pu_bacteria 2979779861 2979782660 409
167 iso_pu_bacteria 2979808191 2979808600 409
168 iso_pu_bacteria 8004374579 8004377632 409
169 iso_pu_bacteria 8004445564 8004445575 409
170 iso_pu_bacteria 8004703790 8004706005 409
171 3300005337 Ga0070682_100116827 Ga0070682_1001168272 410
172 3300009148 Ga0105243_10069701 Ga0105243_100697012 410
173 3300025935 Ga0207709_10048340 Ga0207709_100483401 410
174 3300050492 nmdc:mga0yw44_22514_c1 nmdc:mga0yw44_22514_c1_1178_2584 410
175 iso_pu_bacteria 2643221551 2643776836 410
176 iso_pu_bacteria 2643221555 2643795284 410
177 iso_pu_bacteria 2693429783 2694629993 410
178 iso_pu_bacteria 2693429784 2694635805 410
179 iso_pu_bacteria 2871474448 2871480722 410
180 iso_pu_bacteria 2874123672 2874130358 410
181 iso_pu_bacteria 2937836603 2937841114 410
182 iso_pu_bacteria 8004633249 8004634861 410
183 3300005327 Ga0070658_10144766 Ga0070658_101447662 411
184 3300005339 Ga0070660_100042283 Ga0070660_1000422832 411
185 3300005548 Ga0070665_100158210 Ga0070665_1001582101 411
186 3300006038 Ga0075365_10018901 Ga0075365_100189012 411
187 3300006048 Ga0075363_100044997 Ga0075363_1000449972 411
188 3300009174 Ga0105241_10061062 Ga0105241_100610621 411
189 3300009545 Ga0105237_10123853 Ga0105237_101238532 411
190 3300010375 Ga0105239_10371277 Ga0105239_103712771 411
191 3300025254 Ga0209148_1000317 Ga0209148_100031768 411
192 3300025272 Ga0209455_1000152 Ga0209455_100015275 411
193 3300025909 Ga0207705_10057355 Ga0207705_100573552 411
194 3300026041 Ga0207639_10054983 Ga0207639_100549832 411
195 3300049569 Ga0501032_0089398 Ga0501032_0089398_320_1777 411
196 3300049570 Ga0501033_0076360 Ga0501033_0076360_469_1926 411
197 3300049571 Ga0501034_0040924 Ga0501034_0040924_1966_3423 411
198 3300049822 Ga0501035_0033257 Ga0501035_0033257_888_2345 411
199 3300049823 Ga0501044_0061159 Ga0501044_0061159_2299_3756 411
200 3300050496 nmdc:mga07m45_39666_c1 nmdc:mga07m45_39666_c1_522_1889 411
201 iso_pu_bacteria 2513237090 2513610358 411
202 iso_pu_bacteria 2599185301 2599937246 411
203 iso_pu_bacteria 2841734538 2841737036 411
204 iso_pu_bacteria 2856342000 2856342562 411
205 iso_pu_bacteria 2857349434 2857356832 411
206 iso_pu_bacteria 2888350351 2888354192 411
207 iso_pu_bacteria 2889010040 2889015905 411
208 iso_pu_bacteria 2889016732 2889019043 411
209 iso_pu_bacteria 2906354277 2906360576 411
210 iso_pu_bacteria 2922130491 2922137927 411
211 iso_pu_bacteria 2922185730 2922189043 411
212 iso_pu_bacteria 2958071322 2958073317 411
213 iso_pu_bacteria 2958100919 2958104165 411
214 iso_pu_bacteria 2965119406 2965122992 411
215 iso_pu_bacteria 2968117919 2968123477 411
216 iso_pu_bacteria 2970524798 2970526722 411
217 iso_pu_bacteria 2977971508 2977977713 411
218 iso_pu_bacteria 2979710463 2979716816 411
219 iso_pu_bacteria 2987636660 2987644113 411
220 iso_pu_bacteria 2987652177 2987652506 411
221 iso_pu_bacteria 3004203850 3004208262 411
222 iso_pu_bacteria 8055617313 8055618568 411
223 3300005356 Ga0070674_100142501 Ga0070674_1001425012 412
224 3300025937 Ga0207669_10177191 Ga0207669_101771911 412
225 3300037418 Ga0395900_0209883 Ga0395900_0209883_365_1747 412
226 3300005539 Ga0068853_100198135 Ga0068853_1001981352 413
227 3300006038 Ga0075365_10015365 Ga0075365_100153652 413
228 3300006178 Ga0075367_10105287 Ga0075367_101052871 413
229 3300006186 Ga0075369_10026334 Ga0075369_100263342 413
230 3300025250 Ga0209026_1000041 Ga0209026_100004134 413
231 3300025256 Ga0209759_1000168 Ga0209759_100016812 413
232 3300025297 Ga0209758_1007403 Ga0209758_10074034 413
233 3300026078 Ga0207702_10134833 Ga0207702_101348332 413
234 3300050492 nmdc:mga0yw44_36565_c1 nmdc:mga0yw44_36565_c1_1306_2676 413
235 iso_pu_bacteria 2597489875 2597811623 413
236 iso_pu_bacteria 2888343758 2888344995 413
237 3300005539 Ga0068853_100004748 Ga0068853_10000474810 414
238 3300009551 Ga0105238_10005198 Ga0105238_100051986 414
239 3300010375 Ga0105239_10245229 Ga0105239_102452292 414
240 iso_pu_bacteria 2869162929 2869165062 414
241 3300009545 Ga0105237_10019889 Ga0105237_100198892 415
242 3300037418 Ga0395900_0292247 Ga0395900_0292247_153_1529 415
243 3300037471 Ga0395905_0051259 Ga0395905_0051259_1880_3256 415
244 3300048928 Ga0496125_0074913 Ga0496125_0074913_179_1555 415
245 3300048929 Ga0496126_0040897 Ga0496126_0040897_1732_3108 415
246 iso_pu_bacteria 2885312484 2885313498 420
247 3300003203 JGI25406J46586_10014790 JGI25406J46586_100147902 469
248 3300005985 Ga0081539_10001347 Ga0081539_1000134716 469

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01171

ATP_bind_3

PP-loop family

17

204

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mkp-assembly1.cif.gz_A non redox thiolation in transfer rnas occuring via sulfur activation by a [4fe-4s] cluster 0.8056 10 190
3vrh-assembly1.cif.gz_A-2 crystal structure of ph0300 0.7997 10 190
2z08-assembly1.cif.gz_A crystal structure of uncharacterized conserved protein from thermus thermophilus hb8 0.7854 23 126
5udx-assembly1.cif.gz_B lare, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, in complex with zinc 0.7652 24 190
6b2o-assembly1.cif.gz_E lare, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, c176a variant 0.7588 10 192
ID Description Score Start End Superfamily
af_Q10441_8_228_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8472 11 196 3.40.50.620
af_A0A1D8PQF2_17_249_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8395 22 193 3.40.50.620
af_A0A1D6HL54_20_239_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8299 10 181 3.40.50.620
1ni5A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8172 11 199 3.40.50.620
af_Q54GN1_874_1163_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8128 10 180 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A4S0HWM6-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9782 36 120 GO:0005524
GO:0006400
GO:0032267
AF-A0A527FV96-F1-model_v4 deleted 0.9773 10 120
AF-A0A318AQM7-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9181 22 111 GO:0005524
GO:0006400
GO:0016879
AF-A0A3M1C7Q7-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9139 11 117 GO:0005524
GO:0005737
GO:0006400
GO:0032267
AF-A0A7G6S8N2-F1-model_v4 tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase) 0.9078 1 199 GO:0005524
GO:0005737
GO:0006400
GO:0032267

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pLDDT pTM Quality
62.92 0.53 Medium
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Predicted Structure (AlphaFold2)

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