F359992

General Info

Members Datasets Scaffolds Average Seq Length
248 207 496 254

Family's Representative Sequence

Representative Sequence 3300031616|Ga0307508_10268785|Ga0307508_102687852
Length 281
Sequence VAQPLRRSRVLPRAVGPWKRGSADTGCVTPHPYLDGTQPIGFAHRGGAAVGDENTAAAFARAVDLGYRYIETDTHATSDGVAVVFHDDTLDRLLGRPGRMSDVSWADVRSLRVGGAAVVPRLDEVLDAWPGIRFNIDTKTDAAVAPTLEAVRGTGAEDRVLLASFSERRLRRIRRETGPRVATSLGMAGVAALLARAWRTAPDGVVAVQVPPSSGPVRVVSAGFIRYAHKLGLRVHVWTIDEPDRIRYFLDLGVDGIMTDHIEVLRDVYLSRGLWNPSERP

Samples

Sample ID Description Type Environment
1 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
41 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
42 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
59 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
60 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
66 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
72 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
73 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
74 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
75 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
76 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
77 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
78 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
79 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
80 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
81 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
84 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
85 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
86 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
87 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
88 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
89 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
90 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
91 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
94 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
95 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
96 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
99 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
114 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
124 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
144 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
145 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
148 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
149 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
150 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
151 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
152 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
153 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
154 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
155 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
156 2643221548 Streptomyces sp. Root55 Isolate Unclassified
157 2643221578 Streptomyces sp. Root63 Isolate Unclassified
158 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
159 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
160 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
161 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
162 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
163 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
164 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
165 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
166 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
167 2855683550 Micromonospora sp. RP3T Isolate Unclassified
168 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
169 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
170 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
171 2858868258 Micromonospora sp. MH33 Isolate Unclassified
172 2858882152 Micromonospora noduli MED15 Isolate Nodule
173 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
174 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
175 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
176 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
177 2862574272 Streptomyces sp. AcE210 Isolate Nodule
178 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
179 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
180 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
181 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
182 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
183 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
184 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
185 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
186 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
187 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
188 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
189 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
190 2902582711 Micromonospora sp. AP08 Isolate Unclassified
191 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
192 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
193 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
194 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
195 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
196 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
197 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
198 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
199 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
200 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
201 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
202 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
203 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
204 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
205 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
206 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
207 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 73.79
Metatranscriptomes 1.21
Isolates 25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.82
Nodule 2.82
Rhizoplane 2.82
Rhizosphere 72.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307508_10268785 3300031616 Bacteria 1299
2 rootH1_10008642 3300003316 Bacteria 5511
3 rootL2_10020556 3300003322 Bacteria 5416
4 JGI25160J50197_1012737 3300003354 Bacteria 2901
5 Ga0006562J51391_1101487 3300003578 Bacteria 2340
6 Ga0006562J51391_1105798 3300003578 Bacteria 2220
7 Ga0070658_10011507 3300005327 Bacteria 7096
8 Ga0070683_100001118 3300005329 Bacteria 20257
9 Ga0070683_100204946 3300005329 Bacteria 1873
10 Ga0070682_100230288 3300005337 Bacteria 1324
11 Ga0070660_100288346 3300005339 Bacteria 1344
12 Ga0070689_100067401 3300005340 Bacteria 2790
13 Ga0070661_100026959 3300005344 Bacteria 4136
14 Ga0070713_100103492 3300005436 Bacteria 2471
15 Ga0070710_10121303 3300005437 Bacteria 1583
16 Ga0070681_10359994 3300005458 Bacteria 1365
17 Ga0070706_100188585 3300005467 Bacteria 1927
18 Ga0070679_100148042 3300005530 Bacteria 2325
19 Ga0070684_100028003 3300005535 Bacteria 4763
20 Ga0070684_100036247 3300005535 Bacteria 4226
21 Ga0070684_100051926 3300005535 Bacteria 3563
22 Ga0070693_100286056 3300005547 Bacteria 1106
23 Ga0068855_100087862 3300005563 Bacteria 3592
24 Ga0070664_100170426 3300005564 Bacteria 1931
25 Ga0068857_100266797 3300005577 Bacteria 1572
26 Ga0068857_100628216 3300005577 Bacteria 1017
27 Ga0068864_100048062 3300005618 Bacteria 3667
28 Ga0068863_100532477 3300005841 Bacteria 1159
29 Ga0081540_1033920 3300005983 Bacteria 2763
30 Ga0070716_100131633 3300006173 Bacteria 1582
31 Ga0070712_100132507 3300006175 Bacteria 1891
32 Ga0068871_100496080 3300006358 Bacteria 1100
33 Ga0075428_100052639 3300006844 Bacteria 4461
34 Ga0075430_100003122 3300006846 Bacteria 13855
35 Ga0075431_100012326 3300006847 Bacteria 8627
36 Ga0075431_100154897 3300006847 Bacteria 2358
37 Ga0075429_100203841 3300006880 Bacteria 1733
38 Ga0105250_10022087 3300009092 Bacteria 2567
39 Ga0114129_10534046 3300009147 Bacteria 1528
40 Ga0114129_10764067 3300009147 Bacteria 1236
41 Ga0114129_11079861 3300009147 Bacteria 1006
42 Ga0105248_10205024 3300009177 Bacteria 2222
43 Ga0105238_10358675 3300009551 Bacteria 1447
44 Ga0157369_10027615 3300013105 Bacteria 6288
45 Ga0157372_10498387 3300013307 Bacteria 1420
46 Ga0157379_10060183 3300014968 Bacteria 3395
47 Ga0206353_11088279 3300020082 Bacteria 4152
48 Ga0209758_1009760 3300025297 Bacteria 5888
49 Ga0207426_1000643 3300025302 Bacteria 43590
50 Ga0207426_1019763 3300025302 Bacteria 2350
51 Ga0207685_10173782 3300025905 Bacteria 993
52 Ga0207705_10064140 3300025909 Bacteria 2655
53 Ga0207684_10305372 3300025910 Bacteria 1372
54 Ga0207693_10197224 3300025915 Bacteria 1583
55 Ga0207649_10044010 3300025920 Bacteria 2732
56 Ga0207664_10406381 3300025929 Bacteria 1211
57 Ga0207665_10239049 3300025939 Bacteria 1338
58 Ga0207711_10028425 3300025941 Bacteria 4705
59 Ga0207711_10287943 3300025941 Bacteria 1514
60 Ga0207661_10006294 3300025944 Bacteria 8397
61 Ga0207661_10011118 3300025944 Bacteria 6507
62 Ga0207679_10145061 3300025945 Bacteria 1924
63 Ga0207667_10260579 3300025949 Bacteria 1773
64 Ga0207703_10037069 3300026035 Bacteria 3884
65 Ga0207674_10016821 3300026116 Bacteria 7993
66 Ga0207674_10090155 3300026116 Bacteria 3058
67 Ga0207674_10161547 3300026116 Bacteria 2194
68 Ga0268265_10775019 3300028380 Bacteria 933
69 Ga0307512_10065813 3300030522 Bacteria 2743
70 Ga0307408_100322386 3300031548 Bacteria 1302
71 Ga0307408_100617686 3300031548 Bacteria 965
72 Ga0307514_10076272 3300031649 Bacteria 2497
73 Ga0316578_10126974 3300031728 Bacteria 1534
74 Ga0307405_10053949 3300031731 Bacteria 2507
75 Ga0307406_10015801 3300031901 Bacteria 4375
76 Ga0307412_10040576 3300031911 Bacteria 3012
77 Ga0307409_100056635 3300031995 Bacteria 3033
78 Ga0307416_100000537 3300032002 Bacteria 19365
79 Ga0307416_100144040 3300032002 Bacteria 2172
80 Ga0307415_100000060 3300032126 Bacteria 45727
81 Ga0307415_100057759 3300032126 Bacteria 2668
82 Ga0307415_100085739 3300032126 Bacteria 2264
83 Ga0373935_0169946 3300035692 Bacteria 1491
84 Ga0395900_0131623 3300037418 Bacteria 2563
85 Ga0395898_0007131 3300037466 Bacteria 11866
86 Ga0395905_0005960 3300037471 Bacteria 12344
87 Ga0395901_0007064 3300038443 Bacteria 11348
88 Ga0439436_0001714 3300041404 Bacteria 6418
89 Ga0451853_0722474 3300041512 Bacteria 4634
90 Ga0450894_000356 3300042131 Bacteria 8039
91 Ga0450896_000092 3300042133 Bacteria 6296
92 Ga0450898_001218 3300042134 Bacteria 3329
93 Ga0450899_010417 3300042135 Bacteria 1030
94 Ga0450906_000431 3300042145 Bacteria 8701
95 Ga0466969_0002914 3300044656 Bacteria 9127
96 Ga0466970_0000983 3300044765 Bacteria 13708
97 Ga0466970_0440123 3300044765 Bacteria 746
98 Ga0466957_0075982 3300044842 Bacteria 2085
99 Ga0495603_0003640 3300046455 Bacteria 9170
100 Ga0495603_0018590 3300046455 Bacteria 4205
101 Ga0495603_0020212 3300046455 Bacteria 4036
102 Ga0495603_0026185 3300046455 Bacteria 3524
103 Ga0495629_0009933 3300046459 Bacteria 6946
104 Ga0495629_0016054 3300046459 Bacteria 5380
105 Ga0495629_0021017 3300046459 Bacteria 4657
106 Ga0495629_0060567 3300046459 Bacteria 2645
107 Ga0495638_0019377 3300046460 Bacteria 4502
108 Ga0495638_0152561 3300046460 Bacteria 1339
109 Ga0495651_0051203 3300046462 Bacteria 3185
110 Ga0495582_0031515 3300046473 Bacteria 2914
111 Ga0495639_0007436 3300046475 Bacteria 4702
112 Ga0495585_0105936 3300046492 Bacteria 1499
113 Ga0495594_0005670 3300046499 Bacteria 6422
114 Ga0495594_0024425 3300046499 Bacteria 3246
115 Ga0495596_0074269 3300046500 Bacteria 1320
116 Ga0495607_0046512 3300046501 Bacteria 2548
117 Ga0495583_0080963 3300046506 Bacteria 1411
118 Ga0495608_0046861 3300046511 Bacteria 2875
119 Ga0495620_0020517 3300046515 Bacteria 3226
120 Ga0495631_0057699 3300046518 Bacteria 1689
121 Ga0495631_0092135 3300046518 Bacteria 1305
122 Ga0495643_0001437 3300046522 Bacteria 21986
123 Ga0495644_0071584 3300046523 Bacteria 1303
124 Ga0495640_0041202 3300046533 Bacteria 3228
125 Ga0495645_0011510 3300046543 Bacteria 6227
126 Ga0495622_0018798 3300046557 Bacteria 3219
127 Ga0495668_0031157 3300046616 Bacteria 3006
128 Ga0495668_0036025 3300046616 Bacteria 2774
129 Ga0495611_0055209 3300046648 Bacteria 1797
130 Ga0495611_0063442 3300046648 Bacteria 1681
131 Ga0495625_0167886 3300046660 Bacteria 1466
132 Ga0495635_0054286 3300046663 Bacteria 2760
133 Ga0495661_0120516 3300046665 Bacteria 1449
134 Ga0495588_0005423 3300046674 Bacteria 5675
135 Ga0495657_0003160 3300046675 Bacteria 13581
136 Ga0495613_0004398 3300046689 Bacteria 10548
137 Ga0495613_0049477 3300046689 Bacteria 3102
138 Ga0495613_0054959 3300046689 Bacteria 2926
139 Ga0495624_0284791 3300046690 Bacteria 998
140 Ga0495589_0185819 3300046794 Bacteria 984
141 Ga0495581_0141940 3300047315 Bacteria 1401
142 Ga0495581_0363983 3300047315 Bacteria 844
143 Ga0495636_0037543 3300047318 Bacteria 2001
144 Ga0495676_0024422 3300047321 Bacteria 5231
145 Ga0495676_0034036 3300047321 Bacteria 4279
146 Ga0495687_019238 3300047443 Bacteria 3356
147 Ga0495675_0009257 3300047444 Bacteria 6127
148 Ga0495684_0306996 3300047471 Bacteria 1138
149 Ga0495614_0001964 3300048089 Bacteria 9048
150 Ga0495614_0062609 3300048089 Bacteria 1599
151 Ga0496104_0074106 3300048907 Bacteria 3240
152 Ga0496106_0037385 3300048909 Bacteria 3632
153 Ga0496108_0027085 3300048911 Bacteria 4729
154 Ga0496108_0271028 3300048911 Bacteria 1477
155 Ga0496109_0055340 3300048912 Bacteria 3619
156 Ga0496111_0047450 3300048914 Bacteria 3093
157 Ga0496113_0002924 3300048916 Bacteria 10081
158 Ga0496126_0028681 3300048929 Bacteria 5300
159 Ga0495678_129634 3300049459 Bacteria 837
160 Ga0501031_0003628 3300049568 Bacteria 9933
161 Ga0501032_0029559 3300049569 Bacteria 3760
162 Ga0501033_0050900 3300049570 Bacteria 3071
163 Ga0501034_0010571 3300049571 Bacteria 9605
164 Ga0501034_0231682 3300049571 Bacteria 1796
165 Ga0501036_0091120 3300049572 Bacteria 2575
166 Ga0501037_0043496 3300049573 Bacteria 3300
167 Ga0501038_0228084 3300049574 Bacteria 1483
168 Ga0501043_0161656 3300049579 Bacteria 1749
169 Ga0501047_0047281 3300049581 Bacteria 4157
170 Ga0501047_0049416 3300049581 Bacteria 4061
171 Ga0501047_0192813 3300049581 Bacteria 1900
172 Ga0501048_0043421 3300049582 Bacteria 3217
173 Ga0501035_0066258 3300049822 Bacteria 3205
174 Ga0501044_0006572 3300049823 Bacteria 12839
175 Ga0501044_0086539 3300049823 Bacteria 3165
176 nmdc:mga05p37_250305_c1 3300050507 Bacteria 2125
177 nmdc:mga05p37_458208_c1 3300050507 Bacteria 1474
178 nmdc:mga0qj67_34777_c1 3300050509 Bacteria 3938
179 nmdc:mga06r32_39948_c1 3300050510 Bacteria 4453
180 nmdc:mga0n895_309042_c1 3300050512 Bacteria 1602
181 nmdc:mga0rr50_762134_c1 3300050513 Bacteria 826
182 Ga0495619_0120039 3300053085 Bacteria 1802
183 Ga0500646_0000266 3300053090 Bacteria 15979
184 Ga0500583_0004589 3300053092 Bacteria 4522
185 Ga0500588_0005379 3300053146 Bacteria 2843
186 Ga0501084_0292958 3300054114 Bacteria 1374
187 2515497177 2515154088 Bacteria 5526283
188 2515721517 2515154129 Bacteria 5584369
189 2515758632 2515154137 Bacteria 5711575
190 2516086168 2515154202 Bacteria 5471270
191 2516087976 2515154203 Bacteria 5458536
192 2554259623 2554235005 Bacteria 6457341
193 2585300924 2582581312 Bacteria 7308206
194 2616906188 2616644941 Bacteria 8510691
195 2623589255 2622736626 Bacteria 7181580
196 2643760312 2643221548 Bacteria 8053412
197 2643904413 2643221578 Bacteria 9213798
198 2644406319 2643221673 Bacteria 9196637
199 2644459991 2643221682 Bacteria 6743283
200 2772645156 2772190715 Bacteria 6959372
201 2785345820 2784746763 Bacteria 9783172
202 2819699818 2818991463 Bacteria 7948711
203 2831936951 2831935698 Bacteria 5963223
204 2832009185 2832004796 Bacteria 6538017
205 2855670411 2855670206 Bacteria 7120389
206 2855682668 2855676851 Bacteria 7063653
207 2855685399 2855683550 Bacteria 7134265
208 2856862873 2856858025 Bacteria 7255264
209 2857293377 2857288857 Bacteria 7189066
210 2858849157 2858848962 Bacteria 6963058
211 2858873049 2858868258 Bacteria 7683772
212 2858886894 2858882152 Bacteria 7230291
213 2858892390 2858888857 Bacteria 7060307
214 2858896000 2858895516 Bacteria 7378898
215 2858907161 2858902515 Bacteria 7086037
216 2862186337 2862178590 Bacteria 8583590
217 2862583800 2862574272 Bacteria 10567477
218 2863407053 2863404153 Bacteria 9672205
219 2866066744 2866065130 Bacteria 6518152
220 2867307341 2867302475 Bacteria 7087181
221 2867315340 2867312974 Bacteria 7058875
222 2867319662 2867319477 Bacteria 7069771
223 2867507263 2867507094 Bacteria 6506033
224 2869049612 2869048445 Bacteria 6875584
225 2869068194 2869061728 Bacteria 7112407
226 2869071619 2869068681 Bacteria 7205615
227 2875392619 2875391855 Bacteria 7600475
228 2880491273 2880489317 Bacteria 7096270
229 2880501198 2880495981 Bacteria 7340502
230 2902584956 2902582711 Bacteria 6187705
231 2929223268 2929219909 Bacteria 6984360
232 2929229700 2929226422 Bacteria 7248583
233 2932431937 2932431166 Bacteria 4215299
234 2946052097 2946045630 Bacteria 8527308
235 2947231916 2947224130 Bacteria 9938529
236 2966604515 2966598605 Bacteria 7676064
237 2990059662 2990059506 Bacteria 9321252
238 2995467862 2995463766 Bacteria 8577691
239 2995469643 2995463766 Bacteria 8577691
240 2996224114 2996221748 Bacteria 6799777
241 8003861576 8003856774 Bacteria 7675274
242 8003873089 8003870546 Bacteria 7396674
243 8025535400 8025530807 Bacteria 8495698
244 8048408086 8048406513 Bacteria 8936924
245 8054704674 8054704163 Bacteria 7247792
246 8054729346 8054727385 Bacteria 7558670
247 8054737548 8054734606 Bacteria 6947278
248 8055413338 8055412473 Bacteria 6257500
249 Ga0307508_10268785
250 rootH1_10008642
251 rootL2_10020556
252 JGI25160J50197_1012737
253 Ga0006562J51391_1101487
254 Ga0006562J51391_1105798
255 Ga0070658_10011507
256 Ga0070683_100001118
257 Ga0070683_100204946
258 Ga0070682_100230288
259 Ga0070660_100288346
260 Ga0070689_100067401
261 Ga0070661_100026959
262 Ga0070713_100103492
263 Ga0070710_10121303
264 Ga0070681_10359994
265 Ga0070706_100188585
266 Ga0070679_100148042
267 Ga0070684_100028003
268 Ga0070684_100036247
269 Ga0070684_100051926
270 Ga0070693_100286056
271 Ga0068855_100087862
272 Ga0070664_100170426
273 Ga0068857_100266797
274 Ga0068857_100628216
275 Ga0068864_100048062
276 Ga0068863_100532477
277 Ga0081540_1033920
278 Ga0070716_100131633
279 Ga0070712_100132507
280 Ga0068871_100496080
281 Ga0075428_100052639
282 Ga0075430_100003122
283 Ga0075431_100012326
284 Ga0075431_100154897
285 Ga0075429_100203841
286 Ga0105250_10022087
287 Ga0114129_10534046
288 Ga0114129_10764067
289 Ga0114129_11079861
290 Ga0105248_10205024
291 Ga0105238_10358675
292 Ga0157369_10027615
293 Ga0157372_10498387
294 Ga0157379_10060183
295 Ga0206353_11088279
296 Ga0209758_1009760
297 Ga0207426_1000643
298 Ga0207426_1019763
299 Ga0207685_10173782
300 Ga0207705_10064140
301 Ga0207684_10305372
302 Ga0207693_10197224
303 Ga0207649_10044010
304 Ga0207664_10406381
305 Ga0207665_10239049
306 Ga0207711_10028425
307 Ga0207711_10287943
308 Ga0207661_10006294
309 Ga0207661_10011118
310 Ga0207679_10145061
311 Ga0207667_10260579
312 Ga0207703_10037069
313 Ga0207674_10016821
314 Ga0207674_10090155
315 Ga0207674_10161547
316 Ga0268265_10775019
317 Ga0307512_10065813
318 Ga0307408_100322386
319 Ga0307408_100617686
320 Ga0307514_10076272
321 Ga0316578_10126974
322 Ga0307405_10053949
323 Ga0307406_10015801
324 Ga0307412_10040576
325 Ga0307409_100056635
326 Ga0307416_100000537
327 Ga0307416_100144040
328 Ga0307415_100000060
329 Ga0307415_100057759
330 Ga0307415_100085739
331 Ga0373935_0169946
332 Ga0395900_0131623
333 Ga0395898_0007131
334 Ga0395905_0005960
335 Ga0395901_0007064
336 Ga0439436_0001714
337 Ga0451853_0722474
338 Ga0450894_000356
339 Ga0450896_000092
340 Ga0450898_001218
341 Ga0450899_010417
342 Ga0450906_000431
343 Ga0466969_0002914
344 Ga0466970_0000983
345 Ga0466970_0440123
346 Ga0466957_0075982
347 Ga0495603_0003640
348 Ga0495603_0018590
349 Ga0495603_0020212
350 Ga0495603_0026185
351 Ga0495629_0009933
352 Ga0495629_0016054
353 Ga0495629_0021017
354 Ga0495629_0060567
355 Ga0495638_0019377
356 Ga0495638_0152561
357 Ga0495651_0051203
358 Ga0495582_0031515
359 Ga0495639_0007436
360 Ga0495585_0105936
361 Ga0495594_0005670
362 Ga0495594_0024425
363 Ga0495596_0074269
364 Ga0495607_0046512
365 Ga0495583_0080963
366 Ga0495608_0046861
367 Ga0495620_0020517
368 Ga0495631_0057699
369 Ga0495631_0092135
370 Ga0495643_0001437
371 Ga0495644_0071584
372 Ga0495640_0041202
373 Ga0495645_0011510
374 Ga0495622_0018798
375 Ga0495668_0031157
376 Ga0495668_0036025
377 Ga0495611_0055209
378 Ga0495611_0063442
379 Ga0495625_0167886
380 Ga0495635_0054286
381 Ga0495661_0120516
382 Ga0495588_0005423
383 Ga0495657_0003160
384 Ga0495613_0004398
385 Ga0495613_0049477
386 Ga0495613_0054959
387 Ga0495624_0284791
388 Ga0495589_0185819
389 Ga0495581_0141940
390 Ga0495581_0363983
391 Ga0495636_0037543
392 Ga0495676_0024422
393 Ga0495676_0034036
394 Ga0495687_019238
395 Ga0495675_0009257
396 Ga0495684_0306996
397 Ga0495614_0001964
398 Ga0495614_0062609
399 Ga0496104_0074106
400 Ga0496106_0037385
401 Ga0496108_0027085
402 Ga0496108_0271028
403 Ga0496109_0055340
404 Ga0496111_0047450
405 Ga0496113_0002924
406 Ga0496126_0028681
407 Ga0495678_129634
408 Ga0501031_0003628
409 Ga0501032_0029559
410 Ga0501033_0050900
411 Ga0501034_0010571
412 Ga0501034_0231682
413 Ga0501036_0091120
414 Ga0501037_0043496
415 Ga0501038_0228084
416 Ga0501043_0161656
417 Ga0501047_0047281
418 Ga0501047_0049416
419 Ga0501047_0192813
420 Ga0501048_0043421
421 Ga0501035_0066258
422 Ga0501044_0006572
423 Ga0501044_0086539
424 nmdc:mga05p37_250305_c1
425 nmdc:mga05p37_458208_c1
426 nmdc:mga0qj67_34777_c1
427 nmdc:mga06r32_39948_c1
428 nmdc:mga0n895_309042_c1
429 nmdc:mga0rr50_762134_c1
430 Ga0495619_0120039
431 Ga0500646_0000266
432 Ga0500583_0004589
433 Ga0500588_0005379
434 Ga0501084_0292958
435 2515497177
436 2515721517
437 2515758632
438 2516086168
439 2516087976
440 2554259623
441 2585300924
442 2616906188
443 2623589255
444 2643760312
445 2643904413
446 2644406319
447 2644459991
448 2772645156
449 2785345820
450 2819699818
451 2831936951
452 2832009185
453 2855670411
454 2855682668
455 2855685399
456 2856862873
457 2857293377
458 2858849157
459 2858873049
460 2858886894
461 2858892390
462 2858896000
463 2858907161
464 2862186337
465 2862583800
466 2863407053
467 2866066744
468 2867307341
469 2867315340
470 2867319662
471 2867507263
472 2869049612
473 2869068194
474 2869071619
475 2875392619
476 2880491273
477 2880501198
478 2902584956
479 2929223268
480 2929229700
481 2932431937
482 2946052097
483 2947231916
484 2966604515
485 2990059662
486 2995467862
487 2995469643
488 2996224114
489 8003861576
490 8003873089
491 8025535400
492 8048408086
493 8054704674
494 8054729346
495 8054737548
496 8055413338

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13653

GDPD_2

Glycerophosphoryl diester phosphodiesterase family

234

263

0.94

PF03009

GDPD

Glycerophosphoryl diester phosphodiesterase family

44

264

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ymp-assembly1.cif.gz_A crystal structure of lysoplasmalogen specific phospholipase d 0.8946 1 252
7ymq-assembly1.cif.gz_A crystal structure of lysoplasmalogen specific phopholipase d, f211l mutant 0.8926 1 252
7ymp-assembly1.cif.gz_A crystal structure of lysoplasmalogen specific phospholipase d 0.8812 1 252
7ymq-assembly1.cif.gz_A crystal structure of lysoplasmalogen specific phopholipase d, f211l mutant 0.8793 1 252
8ghi-assembly1.cif.gz_A crystal structure of staphylococcus aureus lysophosphatidylglycerol phospholipase d 0.8646 5 250
ID Description Score Start End Superfamily
af_O07244_11_250_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.9149 18 251 3.20.20.190
af_Q2FZF9_25_304_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.8998 1 249 3.20.20.190
af_O07244_11_250_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.8895 18 251 3.20.20.190
af_Q2FZF9_25_304_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.8761 1 249 3.20.20.190
4r7oG00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.8675 14 249 3.20.20.190
ID Description Score Start End GO Terms
AF-A0A7Z6T548-F1-model_v4 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.9962 29 255 GO:0006629
GO:0008889
AF-A0A7K3RM47-F1-model_v4 Glycerophosphodiester phosphodiesterase 0.994 7 255 GO:0006629
GO:0008081
AF-A0A7L5AZA9-F1-model_v4 deleted 0.9918 6 255
AF-A0A1D8FXD3-F1-model_v4 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.9904 5 255 GO:0006629
GO:0008889
GO:0016020
AF-A0A7Z6T548-F1-model_v4 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.9875 29 255 GO:0006629
GO:0008889

Map