F359412

General Info

Members Datasets Scaffolds Average Seq Length
247 139 494 292

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_11145_c1|nmdc:mga05p37_11145_c1_2060_2947
Length 272
Sequence MMPTSDLPISDRLVVDVAERRRALVEVIRGARREITLSLFRCNDEAIFAELAAATARGVVVDVLVTSRAKGGKKRLEKLWAALERTGALVHPYNDPVVKYHGKYLVADEGPAVVASLNFTRKCFEKTWDALVVTHDPAIVSGLKAVMAADCTASPLPADISPRLIIGPERARMQLTALITHARRSIRLIDAKVSDPDLILKSHGKIMLVDESTLVVGGLALAALSLDFRREVAIVVTDPPAVAEAQQLFETIDAAERATRLGPADAAGEASW

Samples

Sample ID Description Type Environment
1 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
105 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
111 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
112 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
120 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
121 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
137 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
138 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.45
Rhizosphere 95.14
Stem 0
Stem Tuber 0
Unclassified 21.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga05p37_11145_c1 3300050507 Bacteria 10682
2 Ga0070676_10035616 3300005328 Bacteria 2863
3 Ga0070690_100003270 3300005330 Bacteria 8853
4 Ga0070670_100277142 3300005331 Bacteria 1464
5 Ga0070670_100351628 3300005331 Unclassified 1295
6 Ga0070677_10006541 3300005333 Bacteria 3873
7 Ga0068869_100097921 3300005334 Bacteria 2215
8 Ga0070666_10002223 3300005335 Bacteria 11739
9 Ga0070666_10033420 3300005335 Unclassified 3403
10 Ga0070666_10129022 3300005335 Unclassified 1756
11 Ga0068868_100131052 3300005338 Bacteria 2052
12 Ga0070689_100052738 3300005340 Unclassified 3146
13 Ga0070689_100078022 3300005340 Bacteria 2596
14 Ga0070687_100011837 3300005343 Bacteria 3831
15 Ga0070669_100045452 3300005353 Bacteria 3200
16 Ga0070674_100031467 3300005356 Bacteria 3516
17 Ga0070673_100013340 3300005364 Bacteria 5680
18 Ga0070659_100028976 3300005366 Unclassified 4277
19 Ga0070703_10059108 3300005406 Bacteria 1249
20 Ga0070701_10007931 3300005438 Bacteria 4566
21 Ga0070701_10111179 3300005438 Bacteria 1531
22 Ga0070705_100008173 3300005440 Bacteria 5175
23 Ga0070705_100009692 3300005440 Bacteria 4797
24 Ga0070705_100261722 3300005440 Bacteria 1220
25 Ga0070700_100004360 3300005441 Bacteria 7388
26 Ga0070694_100003382 3300005444 Bacteria 9554
27 Ga0070694_100027454 3300005444 Bacteria 3696
28 Ga0070694_100094367 3300005444 Unclassified 2105
29 Ga0070708_100061901 3300005445 Bacteria 3345
30 Ga0070678_100013550 3300005456 Bacteria 5118
31 Ga0070678_100099602 3300005456 Bacteria 2249
32 Ga0070678_100319741 3300005456 Bacteria 1325
33 Ga0070662_100071917 3300005457 Bacteria 2552
34 Ga0070662_100125879 3300005457 Bacteria 1970
35 Ga0070681_10455775 3300005458 Bacteria 1191
36 Ga0068867_100003466 3300005459 Bacteria 11093
37 Ga0068867_100004963 3300005459 Bacteria 9375
38 Ga0068867_100302558 3300005459 Bacteria 1319
39 Ga0070707_100028398 3300005468 Bacteria 5325
40 Ga0070707_100058396 3300005468 Unclassified 3700
41 Ga0070698_100027615 3300005471 Bacteria 5900
42 Ga0070698_100044543 3300005471 Unclassified 4543
43 Ga0070698_100493639 3300005471 Unclassified 1162
44 Ga0070686_100000557 3300005544 Bacteria 22262
45 Ga0070695_100000285 3300005545 Bacteria 25550
46 Ga0070695_100001307 3300005545 Bacteria 13765
47 Ga0070695_100027151 3300005545 Bacteria 3545
48 Ga0070696_100033268 3300005546 Bacteria 3541
49 Ga0070696_100081920 3300005546 Bacteria 2287
50 Ga0070696_100124793 3300005546 Bacteria 1867
51 Ga0070665_100002605 3300005548 Bacteria 19694
52 Ga0070665_100020416 3300005548 Bacteria 6654
53 Ga0070704_100005612 3300005549 Bacteria 7326
54 Ga0070704_100017535 3300005549 Unclassified 4555
55 Ga0070704_100123259 3300005549 Bacteria 1995
56 Ga0068855_100355043 3300005563 Bacteria 1614
57 Ga0068854_100004144 3300005578 Bacteria 9112
58 Ga0068854_100081742 3300005578 Unclassified 2387
59 Ga0068854_100110252 3300005578 Bacteria 2075
60 Ga0070702_100005242 3300005615 Bacteria 6012
61 Ga0068864_100036961 3300005618 Bacteria 4164
62 Ga0068861_100001598 3300005719 Bacteria 14419
63 Ga0068861_100486280 3300005719 Unclassified 1113
64 Ga0068858_100005990 3300005842 Bacteria 11873
65 Ga0068858_100036418 3300005842 Unclassified 4563
66 Ga0068858_100251172 3300005842 Bacteria 1680
67 Ga0068858_100726246 3300005842 Bacteria 967
68 Ga0068862_100018860 3300005844 Bacteria 5749
69 Ga0068862_100101219 3300005844 Bacteria 2520
70 Ga0068862_100729088 3300005844 Bacteria 962
71 Ga0070717_10316081 3300006028 Bacteria 1391
72 Ga0097621_100009229 3300006237 Bacteria 7155
73 Ga0097621_100066559 3300006237 Bacteria 2968
74 Ga0068871_100020817 3300006358 Bacteria 5031
75 Ga0075431_100028262 3300006847 Bacteria 5759
76 Ga0075431_100403823 3300006847 Bacteria 1367
77 Ga0075433_10155681 3300006852 Bacteria 2033
78 Ga0075433_10489656 3300006852 Bacteria 1083
79 Ga0075434_100122908 3300006871 Bacteria 2612
80 Ga0075434_100726567 3300006871 Unclassified 1010
81 Ga0075429_100265766 3300006880 Unclassified 1502
82 Ga0068865_100016844 3300006881 Bacteria 4687
83 Ga0105240_10455604 3300009093 Bacteria 1430
84 Ga0111539_10012208 3300009094 Bacteria 10774
85 Ga0105245_10021022 3300009098 Bacteria 5724
86 Ga0105245_10021919 3300009098 Bacteria 5606
87 Ga0105245_10027137 3300009098 Bacteria 5044
88 Ga0105245_10317422 3300009098 Bacteria 1534
89 Ga0105247_10001308 3300009101 Bacteria 18279
90 Ga0105247_10021306 3300009101 Bacteria 3900
91 Ga0114129_10002855 3300009147 Bacteria 24166
92 Ga0114129_10003412 3300009147 Bacteria 22328
93 Ga0114129_10003501 3300009147 Bacteria 22077
94 Ga0114129_10016594 3300009147 Bacteria 10492
95 Ga0114129_10068426 3300009147 Bacteria 4951
96 Ga0114129_10097431 3300009147 Bacteria 4072
97 Ga0114129_10317520 3300009147 Bacteria 2072
98 Ga0114129_10508667 3300009147 Bacteria 1572
99 Ga0105243_10033716 3300009148 Bacteria 3960
100 Ga0105243_10151293 3300009148 Bacteria 1991
101 Ga0105242_10001526 3300009176 Bacteria 18195
102 Ga0105242_10005531 3300009176 Bacteria 9751
103 Ga0105248_10002676 3300009177 Bacteria 19788
104 Ga0105248_10008556 3300009177 Bacteria 11235
105 Ga0105248_10011401 3300009177 Bacteria 9799
106 Ga0105248_10045624 3300009177 Bacteria 4914
107 Ga0105248_10055490 3300009177 Unclassified 4444
108 Ga0105248_10070261 3300009177 Bacteria 3932
109 Ga0105248_10088284 3300009177 Unclassified 3490
110 Ga0105248_10417362 3300009177 Bacteria 1511
111 Ga0105238_10170721 3300009551 Bacteria 2151
112 Ga0105238_10344724 3300009551 Unclassified 1478
113 Ga0105249_10658920 3300009553 Unclassified 1105
114 Ga0157374_10072723 3300013296 Unclassified 3244
115 Ga0157378_10255067 3300013297 Bacteria 1680
116 Ga0163162_10025759 3300013306 Bacteria 5814
117 Ga0163162_10408699 3300013306 Unclassified 1490
118 Ga0163162_10628429 3300013306 Bacteria 1199
119 Ga0157372_10338675 3300013307 Unclassified 1752
120 Ga0163163_10014501 3300014325 Bacteria 7247
121 Ga0163163_10546849 3300014325 Bacteria 1220
122 Ga0157377_10229563 3300014745 Bacteria 1192
123 Ga0157379_10025098 3300014968 Bacteria 5292
124 Ga0157379_10030496 3300014968 Unclassified 4801
125 Ga0157376_10032951 3300014969 Bacteria 4166
126 Ga0157376_10044334 3300014969 Unclassified 3656
127 Ga0157376_10326162 3300014969 Unclassified 1461
128 Ga0163161_10150069 3300017792 Bacteria 1771
129 Ga0207653_10060096 3300025885 Bacteria 1280
130 Ga0207710_10003024 3300025900 Bacteria 7575
131 Ga0207680_10008623 3300025903 Bacteria 5017
132 Ga0207645_10007127 3300025907 Bacteria 7937
133 Ga0207663_10330016 3300025916 Bacteria 1149
134 Ga0207646_10029448 3300025922 Bacteria 4990
135 Ga0207681_10006649 3300025923 Bacteria 7100
136 Ga0207681_10044204 3300025923 Bacteria 2984
137 Ga0207650_10116953 3300025925 Bacteria 2071
138 Ga0207687_10015522 3300025927 Bacteria 4995
139 Ga0207687_10163263 3300025927 Bacteria 1712
140 Ga0207687_10217927 3300025927 Unclassified 1501
141 Ga0207687_10270017 3300025927 Bacteria 1359
142 Ga0207706_10066763 3300025933 Bacteria 3166
143 Ga0207706_10199621 3300025933 Bacteria 1754
144 Ga0207709_10025881 3300025935 Bacteria 3364
145 Ga0207709_10083321 3300025935 Bacteria 2067
146 Ga0207670_10034417 3300025936 Bacteria 3274
147 Ga0207670_10193673 3300025936 Unclassified 1540
148 Ga0207669_10099857 3300025937 Bacteria 1915
149 Ga0207704_10005811 3300025938 Bacteria 5707
150 Ga0207704_10176321 3300025938 Bacteria 1540
151 Ga0207704_10225036 3300025938 Bacteria 1391
152 Ga0207691_10287488 3300025940 Unclassified 1414
153 Ga0207711_10017009 3300025941 Bacteria 6040
154 Ga0207711_10024083 3300025941 Bacteria 5096
155 Ga0207711_10024394 3300025941 Bacteria 5066
156 Ga0207711_10065328 3300025941 Unclassified 3145
157 Ga0207711_10206353 3300025941 Unclassified 1794
158 Ga0207711_10230669 3300025941 Bacteria 1695
159 Ga0207711_10297995 3300025941 Bacteria 1487
160 Ga0207679_10225396 3300025945 Bacteria 1579
161 Ga0207651_10201394 3300025960 Bacteria 1596
162 Ga0207712_10358775 3300025961 Bacteria 1214
163 Ga0207668_10463586 3300025972 Unclassified 1084
164 Ga0207640_10003432 3300025981 Bacteria 8536
165 Ga0207658_10338758 3300025986 Unclassified 1307
166 Ga0207703_10004466 3300026035 Bacteria 11488
167 Ga0207703_10010446 3300026035 Bacteria 7260
168 Ga0207703_10110835 3300026035 Bacteria 2342
169 Ga0207639_10331627 3300026041 Bacteria 1354
170 Ga0207708_10010959 3300026075 Bacteria 6744
171 Ga0207708_10262820 3300026075 Bacteria 1393
172 Ga0207648_10010999 3300026089 Bacteria 8545
173 Ga0207648_10026055 3300026089 Bacteria 5200
174 Ga0207648_10334496 3300026089 Bacteria 1363
175 Ga0207648_10601724 3300026089 Bacteria 1013
176 Ga0207676_10034481 3300026095 Bacteria 3832
177 Ga0207676_10277986 3300026095 Bacteria 1519
178 Ga0207675_100001546 3300026118 Bacteria 23054
179 Ga0207683_10029464 3300026121 Bacteria 4752
180 Ga0207683_10355457 3300026121 Unclassified 1345
181 Ga0207428_10118893 3300027907 Bacteria 2028
182 Ga0268265_10046485 3300028380 Bacteria 3245
183 Ga0268265_10346045 3300028380 Bacteria 1355
184 Ga0268264_10249968 3300028381 Unclassified 1647
185 Ga0373945_0066017 3300035116 Unclassified 1360
186 Ga0373935_0037496 3300035692 Bacteria 3034
187 Ga0373937_0066408 3300036401 Bacteria 3322
188 Ga0436365_1301979 3300039437 Bacteria 2085
189 Ga0495603_0180852 3300046455 Unclassified 1220
190 Ga0495653_0155801 3300046463 Unclassified 1591
191 Ga0495582_0271965 3300046473 Unclassified 972
192 Ga0495664_0093228 3300046477 Bacteria 1812
193 Ga0495608_0002810 3300046511 Bacteria 12481
194 Ga0495608_0148981 3300046511 Bacteria 1492
195 Ga0495628_0018188 3300046516 Bacteria 5829
196 Ga0495630_0002722 3300046517 Bacteria 12258
197 Ga0495652_0092529 3300046529 Bacteria 2470
198 Ga0495586_0087116 3300046535 Unclassified 1722
199 Ga0495587_0023632 3300046536 Bacteria 3777
200 Ga0495645_0009520 3300046543 Bacteria 6793
201 Ga0495645_0044672 3300046543 Bacteria 3231
202 Ga0495667_0106180 3300046559 Bacteria 1815
203 Ga0495634_0248633 3300046642 Unclassified 1088
204 Ga0495635_0029015 3300046663 Unclassified 3847
205 Ga0495599_0101801 3300046678 Bacteria 1790
206 Ga0495658_0040837 3300046683 Bacteria 2581
207 Ga0495658_0226917 3300046683 Unclassified 1170
208 Ga0495613_0000318 3300046689 Bacteria 43663
209 Ga0495600_0003179 3300046809 Bacteria 9610
210 Ga0495581_0081560 3300047315 Bacteria 1873
211 Ga0495604_0084313 3300047317 Unclassified 2373
212 Ga0495674_0098839 3300047319 Unclassified 2485
213 Ga0495674_0179969 3300047319 Bacteria 1761
214 Ga0495684_0000053 3300047471 Bacteria 82157
215 Ga0496101_0333413 3300048904 Bacteria 1191
216 Ga0496108_0025024 3300048911 Bacteria 4917
217 Ga0496108_0227479 3300048911 Bacteria 1621
218 Ga0496109_0036020 3300048912 Bacteria 4467
219 Ga0496109_0179542 3300048912 Bacteria 1988
220 Ga0496110_0201801 3300048913 Unclassified 1807
221 Ga0496110_0258964 3300048913 Bacteria 1583
222 Ga0496112_0024381 3300048915 Bacteria 5790
223 Ga0496112_0064946 3300048915 Unclassified 3602
224 Ga0496113_0017356 3300048916 Bacteria 4994
225 Ga0496114_0096265 3300048917 Bacteria 2520
226 nmdc:mga05p37_119484_c1 3300050507 Bacteria 3238
227 nmdc:mga05p37_19522_c1 3300050507 Bacteria 8199
228 nmdc:mga05p37_337893_c1 3300050507 Bacteria 1777
229 nmdc:mga05p37_45821_c1 3300050507 Unclassified 2635
230 nmdc:mga05p37_604499_c1 3300050507 Bacteria 1237
231 nmdc:mga05p37_7392_c1 3300050507 Bacteria 12958
232 nmdc:mga05p37_98171_c1 3300050507 Unclassified 3608
233 nmdc:mga09592_295697_c1 3300050508 Unclassified 1404
234 nmdc:mga09592_313935_c1 3300050508 Unclassified 1358
235 nmdc:mga06r32_42269_c1 3300050510 Bacteria 4333
236 nmdc:mga08y16_4432_c1 3300050511 Bacteria 14670
237 nmdc:mga0rr50_127191_c1 3300050513 Bacteria 2036
238 nmdc:mga0rr50_247158_c1 3300050513 Bacteria 1480
239 nmdc:mga0a205_132970_c1 3300050515 Bacteria 2388
240 nmdc:mga0a205_139809_c1 3300050515 Bacteria 2322
241 nmdc:mga0a205_327861_c1 3300050515 Bacteria 1401
242 nmdc:mga0a205_58881_c1 3300050515 Unclassified 3711
243 Ga0495601_0003710 3300053077 Bacteria 8790
244 Ga0495601_0210641 3300053077 Bacteria 1270
245 Ga0495612_0083200 3300053078 Bacteria 1347
246 Ga0495595_0058346 3300053084 Unclassified 1802
247 Ga0495619_0351148 3300053085 Unclassified 1020
248 nmdc:mga05p37_11145_c1
249 Ga0070676_10035616
250 Ga0070690_100003270
251 Ga0070670_100277142
252 Ga0070670_100351628
253 Ga0070677_10006541
254 Ga0068869_100097921
255 Ga0070666_10002223
256 Ga0070666_10033420
257 Ga0070666_10129022
258 Ga0068868_100131052
259 Ga0070689_100052738
260 Ga0070689_100078022
261 Ga0070687_100011837
262 Ga0070669_100045452
263 Ga0070674_100031467
264 Ga0070673_100013340
265 Ga0070659_100028976
266 Ga0070703_10059108
267 Ga0070701_10007931
268 Ga0070701_10111179
269 Ga0070705_100008173
270 Ga0070705_100009692
271 Ga0070705_100261722
272 Ga0070700_100004360
273 Ga0070694_100003382
274 Ga0070694_100027454
275 Ga0070694_100094367
276 Ga0070708_100061901
277 Ga0070678_100013550
278 Ga0070678_100099602
279 Ga0070678_100319741
280 Ga0070662_100071917
281 Ga0070662_100125879
282 Ga0070681_10455775
283 Ga0068867_100003466
284 Ga0068867_100004963
285 Ga0068867_100302558
286 Ga0070707_100028398
287 Ga0070707_100058396
288 Ga0070698_100027615
289 Ga0070698_100044543
290 Ga0070698_100493639
291 Ga0070686_100000557
292 Ga0070695_100000285
293 Ga0070695_100001307
294 Ga0070695_100027151
295 Ga0070696_100033268
296 Ga0070696_100081920
297 Ga0070696_100124793
298 Ga0070665_100002605
299 Ga0070665_100020416
300 Ga0070704_100005612
301 Ga0070704_100017535
302 Ga0070704_100123259
303 Ga0068855_100355043
304 Ga0068854_100004144
305 Ga0068854_100081742
306 Ga0068854_100110252
307 Ga0070702_100005242
308 Ga0068864_100036961
309 Ga0068861_100001598
310 Ga0068861_100486280
311 Ga0068858_100005990
312 Ga0068858_100036418
313 Ga0068858_100251172
314 Ga0068858_100726246
315 Ga0068862_100018860
316 Ga0068862_100101219
317 Ga0068862_100729088
318 Ga0070717_10316081
319 Ga0097621_100009229
320 Ga0097621_100066559
321 Ga0068871_100020817
322 Ga0075431_100028262
323 Ga0075431_100403823
324 Ga0075433_10155681
325 Ga0075433_10489656
326 Ga0075434_100122908
327 Ga0075434_100726567
328 Ga0075429_100265766
329 Ga0068865_100016844
330 Ga0105240_10455604
331 Ga0111539_10012208
332 Ga0105245_10021022
333 Ga0105245_10021919
334 Ga0105245_10027137
335 Ga0105245_10317422
336 Ga0105247_10001308
337 Ga0105247_10021306
338 Ga0114129_10002855
339 Ga0114129_10003412
340 Ga0114129_10003501
341 Ga0114129_10016594
342 Ga0114129_10068426
343 Ga0114129_10097431
344 Ga0114129_10317520
345 Ga0114129_10508667
346 Ga0105243_10033716
347 Ga0105243_10151293
348 Ga0105242_10001526
349 Ga0105242_10005531
350 Ga0105248_10002676
351 Ga0105248_10008556
352 Ga0105248_10011401
353 Ga0105248_10045624
354 Ga0105248_10055490
355 Ga0105248_10070261
356 Ga0105248_10088284
357 Ga0105248_10417362
358 Ga0105238_10170721
359 Ga0105238_10344724
360 Ga0105249_10658920
361 Ga0157374_10072723
362 Ga0157378_10255067
363 Ga0163162_10025759
364 Ga0163162_10408699
365 Ga0163162_10628429
366 Ga0157372_10338675
367 Ga0163163_10014501
368 Ga0163163_10546849
369 Ga0157377_10229563
370 Ga0157379_10025098
371 Ga0157379_10030496
372 Ga0157376_10032951
373 Ga0157376_10044334
374 Ga0157376_10326162
375 Ga0163161_10150069
376 Ga0207653_10060096
377 Ga0207710_10003024
378 Ga0207680_10008623
379 Ga0207645_10007127
380 Ga0207663_10330016
381 Ga0207646_10029448
382 Ga0207681_10006649
383 Ga0207681_10044204
384 Ga0207650_10116953
385 Ga0207687_10015522
386 Ga0207687_10163263
387 Ga0207687_10217927
388 Ga0207687_10270017
389 Ga0207706_10066763
390 Ga0207706_10199621
391 Ga0207709_10025881
392 Ga0207709_10083321
393 Ga0207670_10034417
394 Ga0207670_10193673
395 Ga0207669_10099857
396 Ga0207704_10005811
397 Ga0207704_10176321
398 Ga0207704_10225036
399 Ga0207691_10287488
400 Ga0207711_10017009
401 Ga0207711_10024083
402 Ga0207711_10024394
403 Ga0207711_10065328
404 Ga0207711_10206353
405 Ga0207711_10230669
406 Ga0207711_10297995
407 Ga0207679_10225396
408 Ga0207651_10201394
409 Ga0207712_10358775
410 Ga0207668_10463586
411 Ga0207640_10003432
412 Ga0207658_10338758
413 Ga0207703_10004466
414 Ga0207703_10010446
415 Ga0207703_10110835
416 Ga0207639_10331627
417 Ga0207708_10010959
418 Ga0207708_10262820
419 Ga0207648_10010999
420 Ga0207648_10026055
421 Ga0207648_10334496
422 Ga0207648_10601724
423 Ga0207676_10034481
424 Ga0207676_10277986
425 Ga0207675_100001546
426 Ga0207683_10029464
427 Ga0207683_10355457
428 Ga0207428_10118893
429 Ga0268265_10046485
430 Ga0268265_10346045
431 Ga0268264_10249968
432 Ga0373945_0066017
433 Ga0373935_0037496
434 Ga0373937_0066408
435 Ga0436365_1301979
436 Ga0495603_0180852
437 Ga0495653_0155801
438 Ga0495582_0271965
439 Ga0495664_0093228
440 Ga0495608_0002810
441 Ga0495608_0148981
442 Ga0495628_0018188
443 Ga0495630_0002722
444 Ga0495652_0092529
445 Ga0495586_0087116
446 Ga0495587_0023632
447 Ga0495645_0009520
448 Ga0495645_0044672
449 Ga0495667_0106180
450 Ga0495634_0248633
451 Ga0495635_0029015
452 Ga0495599_0101801
453 Ga0495658_0040837
454 Ga0495658_0226917
455 Ga0495613_0000318
456 Ga0495600_0003179
457 Ga0495581_0081560
458 Ga0495604_0084313
459 Ga0495674_0098839
460 Ga0495674_0179969
461 Ga0495684_0000053
462 Ga0496101_0333413
463 Ga0496108_0025024
464 Ga0496108_0227479
465 Ga0496109_0036020
466 Ga0496109_0179542
467 Ga0496110_0201801
468 Ga0496110_0258964
469 Ga0496112_0024381
470 Ga0496112_0064946
471 Ga0496113_0017356
472 Ga0496114_0096265
473 nmdc:mga05p37_119484_c1
474 nmdc:mga05p37_19522_c1
475 nmdc:mga05p37_337893_c1
476 nmdc:mga05p37_45821_c1
477 nmdc:mga05p37_604499_c1
478 nmdc:mga05p37_7392_c1
479 nmdc:mga05p37_98171_c1
480 nmdc:mga09592_295697_c1
481 nmdc:mga09592_313935_c1
482 nmdc:mga06r32_42269_c1
483 nmdc:mga08y16_4432_c1
484 nmdc:mga0rr50_127191_c1
485 nmdc:mga0rr50_247158_c1
486 nmdc:mga0a205_132970_c1
487 nmdc:mga0a205_139809_c1
488 nmdc:mga0a205_327861_c1
489 nmdc:mga0a205_58881_c1
490 Ga0495601_0003710
491 Ga0495601_0210641
492 Ga0495612_0083200
493 Ga0495595_0058346
494 Ga0495619_0351148

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13091

PLDc_2

PLD-like domain

24

151

0.93

PF13091

PLDc_2

PLD-like domain

163

252

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5eks-assembly3.cif.gz_A structure of 3-dehydroquinate synthase from acinetobacter baumannii in complex with nad 0.8563 61 97
5eks-assembly3.cif.gz_B-2 structure of 3-dehydroquinate synthase from acinetobacter baumannii in complex with nad 0.856 61 97
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.8264 9 153
4urj-assembly1.cif.gz_A crystal structure of human bj-tsa-9 0.826 9 149
6lk2-assembly2.cif.gz_D crystal structure of providencia alcalifaciens 3-dehydroquinate synthase (dhqs) in complex with mg2+, nad and chlorogenic acid 0.8191 61 97
ID Description Score Start End Superfamily
af_Q8N2A8_32_212_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8829 20 158 3.30.870.10
af_P0AA84_201_339_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8649 17 148 3.30.870.10
af_Q2FWG8_323_468_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8598 17 149 3.30.870.10
af_P0A6H8_316_458_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8582 20 154 3.30.870.10
af_O17405_364_549_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8529 21 149 3.30.870.10
ID Description Score Start End GO Terms
AF-A0A2V8B7V9-F1-model_v4 phospholipase D (EC 3.1.4.4) 0.9734 4 277 GO:0006793
GO:0016042
GO:0016891
AF-A0A7X2TZA4-F1-model_v4 phospholipase D (EC 3.1.4.4) 0.948 2 280 GO:0016891
GO:0030572
GO:0032049
AF-A0A359LXE2-F1-model_v4 phospholipase D (EC 3.1.4.4) 0.9472 5 276 GO:0006793
GO:0016042
GO:0016891
AF-A0A2V8K371-F1-model_v4 phospholipase D (EC 3.1.4.4) 0.9458 10 149 GO:0006793
GO:0016891
AF-A0A2V8F1S6-F1-model_v4 Phosphatidylserine synthase 0.9449 11 271 GO:0006793
GO:0016042
GO:0016891

Map