F358169

General Info

Members Datasets Scaffolds Average Seq Length
246 159 492 276

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10267037|Ga0157378_102670372
Length 322
Sequence VNGERQWRDTVSSVIDRLHSLCDVTNRVEYPLHRLRKAIERQEGSTLHTGCIHTSDYLKRIGVPDIAAATSPFDPGYDPSTLASHLQQSAHLMSTLKISMACWMVANESATRMKIAMARAHGVPTVTGGGPFEIAVAQGELPAYLDLCADVGVTRIECGQGFTDSELHPRDIVAAAHSRGLDVQMELGKKHDGGFSDRTLAAWIDQGKEWLDAGAVQLVVEARESAQGVGLFDQDGHLNTAYAERFVRAFGFDTVIFEAPNKPSQFALLNHFGRDVHLCNVRLEELLRVEIYRRGLHSDAFGHTNLRPAAPEVFAIQTGGNP

Samples

Sample ID Description Type Environment
1 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
82 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
85 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
86 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
88 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
89 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
125 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
126 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
127 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
128 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
129 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
130 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
131 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
132 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
136 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
139 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
140 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
141 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
142 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
143 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
144 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
145 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.75
Metatranscriptomes 2.85
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.41
Rhizoplane 1.63
Rhizosphere 96.75
Stem 0
Stem Tuber 0
Unclassified 27.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157378_10267037 3300013297 Bacteria 1644
2 SwRhRL2b_contig_1647996 2162886007 Bacteria 6934
3 Ga0058862_10068974 3300004803 Unclassified 3002
4 Ga0065704_10002853 3300005289 Bacteria 9604
5 Ga0065715_10107969 3300005293 Bacteria 2743
6 Ga0065707_10087557 3300005295 Bacteria 4981
7 Ga0070690_100023323 3300005330 Bacteria 3795
8 Ga0070690_100440763 3300005330 Bacteria 964
9 Ga0070666_10004214 3300005335 Bacteria 8731
10 Ga0068868_100126313 3300005338 Unclassified 2090
11 Ga0068868_100183953 3300005338 Bacteria 1735
12 Ga0070689_100026660 3300005340 Unclassified 4353
13 Ga0070661_100095783 3300005344 Unclassified 2202
14 Ga0070661_100114452 3300005344 Bacteria 2016
15 Ga0070692_10020509 3300005345 Bacteria 3205
16 Ga0070669_100006326 3300005353 Bacteria 8538
17 Ga0070675_100349443 3300005354 Bacteria 1311
18 Ga0070671_100080644 3300005355 Bacteria 2721
19 Ga0070673_100119626 3300005364 Bacteria 2195
20 Ga0070673_100364980 3300005364 Bacteria 1284
21 Ga0070688_100032416 3300005365 Bacteria 3150
22 Ga0070659_100057974 3300005366 Bacteria 3055
23 Ga0070709_10071592 3300005434 Bacteria 2239
24 Ga0070714_100025751 3300005435 Bacteria 4858
25 Ga0070713_100146291 3300005436 Bacteria 2098
26 Ga0070705_100028331 3300005440 Bacteria 3067
27 Ga0070705_100156544 3300005440 Bacteria 1518
28 Ga0070700_100004410 3300005441 Bacteria 7351
29 Ga0070694_100015582 3300005444 Bacteria 4777
30 Ga0070694_100319703 3300005444 Unclassified 1194
31 Ga0070662_100014872 3300005457 Bacteria 5204
32 Ga0070681_10000864 3300005458 Bacteria 25499
33 Ga0068867_100006248 3300005459 Bacteria 8426
34 Ga0070706_100004855 3300005467 Bacteria 12876
35 Ga0070707_100002618 3300005468 Bacteria 17104
36 Ga0070707_100265606 3300005468 Bacteria 1669
37 Ga0070698_100083704 3300005471 Bacteria 3179
38 Ga0070698_100091057 3300005471 Bacteria 3033
39 Ga0070699_100001573 3300005518 Bacteria 20875
40 Ga0070699_100004316 3300005518 Bacteria 12570
41 Ga0070699_100357648 3300005518 Bacteria 1316
42 Ga0070699_100401551 3300005518 Bacteria 1239
43 Ga0070679_100028847 3300005530 Bacteria 5474
44 Ga0070697_100042596 3300005536 Bacteria 3674
45 Ga0070697_100322767 3300005536 Unclassified 1330
46 Ga0070672_100013234 3300005543 Bacteria 5818
47 Ga0070672_100358765 3300005543 Bacteria 1244
48 Ga0070686_100139079 3300005544 Bacteria 1688
49 Ga0070686_100250370 3300005544 Bacteria 1294
50 Ga0070696_100029063 3300005546 Bacteria 3774
51 Ga0070693_100225983 3300005547 Unclassified 1229
52 Ga0070704_100001721 3300005549 Bacteria 11934
53 Ga0068855_100097869 3300005563 Unclassified 3380
54 Ga0068857_100045477 3300005577 Bacteria 3895
55 Ga0068857_100103891 3300005577 Bacteria 2551
56 Ga0068859_100000637 3300005617 Bacteria 35037
57 Ga0068859_100265315 3300005617 Bacteria 1809
58 Ga0068864_100028384 3300005618 Bacteria 4729
59 Ga0068861_100002665 3300005719 Bacteria 11684
60 Ga0068870_10008471 3300005840 Bacteria 4628
61 Ga0068870_10056975 3300005840 Bacteria 2088
62 Ga0068863_100031920 3300005841 Bacteria 5024
63 Ga0068858_100075756 3300005842 Bacteria 3125
64 Ga0068858_100120720 3300005842 Bacteria 2451
65 Ga0068860_100001818 3300005843 Bacteria 22707
66 Ga0068860_100118131 3300005843 Bacteria 2538
67 Ga0068860_100185982 3300005843 Bacteria 2009
68 Ga0068862_100004347 3300005844 Bacteria 11995
69 Ga0068862_100190326 3300005844 Bacteria 1846
70 Ga0081455_10102375 3300005937 Bacteria 2296
71 Ga0081539_10031082 3300005985 Unclassified 3299
72 Ga0070717_10002026 3300006028 Bacteria 14185
73 Ga0097621_100001170 3300006237 Bacteria 18151
74 Ga0097621_100054453 3300006237 Bacteria 3263
75 Ga0075428_100157648 3300006844 Bacteria 2465
76 Ga0075431_100302623 3300006847 Unclassified 1615
77 Ga0075433_10001139 3300006852 Bacteria 19258
78 Ga0075433_10060237 3300006852 Unclassified 3323
79 Ga0075434_100000126 3300006871 Bacteria 45504
80 Ga0075434_100017065 3300006871 Bacteria 6986
81 Ga0075434_100028030 3300006871 Bacteria 5531
82 Ga0075434_100055996 3300006871 Unclassified 3918
83 Ga0075434_100154369 3300006871 Bacteria 2315
84 Ga0075434_100223234 3300006871 Unclassified 1904
85 Ga0075434_100399076 3300006871 Unclassified 1396
86 Ga0075434_100509850 3300006871 Bacteria 1223
87 Ga0075434_100627689 3300006871 Unclassified 1093
88 Ga0075429_100100750 3300006880 Unclassified 2521
89 Ga0075436_100108850 3300006914 Bacteria 1933
90 Ga0097620_100000637 3300006931 Bacteria 35037
91 Ga0097620_100265326 3300006931 Bacteria 1809
92 Ga0075435_100008404 3300007076 Bacteria 7404
93 Ga0075435_100018896 3300007076 Bacteria 5252
94 Ga0075435_100023623 3300007076 Bacteria 4758
95 Ga0075435_100050616 3300007076 Unclassified 3344
96 Ga0099794_10000614 3300007265 Bacteria 11849
97 Ga0111539_10011670 3300009094 Bacteria 11021
98 Ga0105245_10000852 3300009098 Bacteria 27661
99 Ga0105247_10034584 3300009101 Bacteria 3077
100 Ga0114129_10030210 3300009147 Bacteria 7673
101 Ga0114129_10057442 3300009147 Bacteria 5445
102 Ga0114129_10480900 3300009147 Unclassified 1625
103 Ga0114129_10627239 3300009147 Unclassified 1390
104 Ga0105243_10042120 3300009148 Bacteria 3573
105 Ga0105241_10654011 3300009174 Unclassified 955
106 Ga0105242_10018284 3300009176 Bacteria 5477
107 Ga0105248_10000788 3300009177 Bacteria 35553
108 Ga0105249_10032163 3300009553 Unclassified 4745
109 Ga0105249_10293016 3300009553 Unclassified 1629
110 Ga0099796_10004762 3300010159 Bacteria 3317
111 Ga0105246_10083610 3300011119 Bacteria 2281
112 Ga0157370_10070561 3300013104 Unclassified 3298
113 Ga0157370_10367584 3300013104 Unclassified 1325
114 Ga0157369_10042261 3300013105 Unclassified 4973
115 Ga0157369_10144066 3300013105 Unclassified 2519
116 Ga0157374_10564121 3300013296 Bacteria 1147
117 Ga0163162_10003636 3300013306 Bacteria 14778
118 Ga0163162_10014070 3300013306 Bacteria 7820
119 Ga0163162_10703979 3300013306 Unclassified 1132
120 Ga0157372_10033997 3300013307 Bacteria 5601
121 Ga0157375_10007605 3300013308 Bacteria 9479
122 Ga0163163_10008041 3300014325 Bacteria 9342
123 Ga0163163_10051685 3300014325 Unclassified 4051
124 Ga0157380_10011959 3300014326 Bacteria 6279
125 Ga0157380_10337173 3300014326 Bacteria 1405
126 Ga0182008_10115603 3300014497 Bacteria 1331
127 Ga0157379_10012418 3300014968 Bacteria 7438
128 Ga0157376_10001926 3300014969 Bacteria 13865
129 Ga0157376_10043957 3300014969 Bacteria 3669
130 Ga0206356_10096535 3300020070 Unclassified 1299
131 Ga0206356_10656542 3300020070 Unclassified 2500
132 Ga0206352_10507898 3300020078 Unclassified 2909
133 Ga0206354_10198382 3300020081 Unclassified 1391
134 Ga0206354_10416802 3300020081 Unclassified 1130
135 Ga0213876_10197477 3300021384 Archaea 1069
136 Ga0224712_10011212 3300022467 Unclassified 2772
137 Ga0207680_10001396 3300025903 Bacteria 11425
138 Ga0207680_10380291 3300025903 Unclassified 995
139 Ga0207647_10075416 3300025904 Unclassified 2030
140 Ga0207643_10005649 3300025908 Bacteria 6687
141 Ga0207643_10064800 3300025908 Bacteria 2092
142 Ga0207684_10000723 3300025910 Bacteria 38859
143 Ga0207684_10039765 3300025910 Unclassified 3987
144 Ga0207684_10084645 3300025910 Bacteria 2701
145 Ga0207707_10058718 3300025912 Unclassified 3348
146 Ga0207662_10007725 3300025918 Bacteria 5859
147 Ga0207649_10078004 3300025920 Unclassified 2136
148 Ga0207646_10017944 3300025922 Bacteria 6608
149 Ga0207646_10057989 3300025922 Bacteria 3459
150 Ga0207681_10003425 3300025923 Bacteria 9917
151 Ga0207650_10092883 3300025925 Bacteria 2309
152 Ga0207659_10164720 3300025926 Bacteria 1744
153 Ga0207687_10007300 3300025927 Bacteria 7291
154 Ga0207700_10273846 3300025928 Unclassified 1450
155 Ga0207700_10391893 3300025928 Bacteria 1216
156 Ga0207664_10004580 3300025929 Bacteria 9368
157 Ga0207706_10118956 3300025933 Bacteria 2323
158 Ga0207686_10014152 3300025934 Bacteria 4433
159 Ga0207686_10039800 3300025934 Bacteria 2854
160 Ga0207670_10068695 3300025936 Unclassified 2442
161 Ga0207669_10155493 3300025937 Bacteria 1608
162 Ga0207691_10023910 3300025940 Bacteria 5750
163 Ga0207691_10169109 3300025940 Unclassified 1915
164 Ga0207711_10003817 3300025941 Bacteria 12961
165 Ga0207667_10143629 3300025949 Unclassified 2457
166 Ga0207712_10103962 3300025961 Bacteria 2117
167 Ga0207668_10024435 3300025972 Unclassified 3900
168 Ga0207640_10063712 3300025981 Bacteria 2451
169 Ga0207658_10119495 3300025986 Bacteria 2098
170 Ga0207677_10026324 3300026023 Bacteria 3646
171 Ga0207703_10014451 3300026035 Bacteria 6156
172 Ga0207703_10110223 3300026035 Bacteria 2348
173 Ga0207708_10008149 3300026075 Bacteria 7761
174 Ga0207708_10093644 3300026075 Bacteria 2319
175 Ga0207648_10002160 3300026089 Bacteria 21368
176 Ga0207676_10002027 3300026095 Bacteria 14721
177 Ga0207674_10016344 3300026116 Bacteria 8129
178 Ga0207674_10115599 3300026116 Bacteria 2655
179 Ga0207675_100005431 3300026118 Bacteria 12212
180 Ga0207675_100660988 3300026118 Unclassified 1052
181 Ga0207428_10006089 3300027907 Bacteria 11155
182 Ga0268265_10000430 3300028380 Bacteria 44554
183 Ga0268264_10019375 3300028381 Bacteria 5561
184 Ga0268264_10099156 3300028381 Bacteria 2528
185 Ga0268264_10391962 3300028381 Bacteria 1332
186 Ga0265338_10295091 3300028800 Bacteria 1180
187 Ga0265325_10007834 3300031241 Bacteria 6358
188 Ga0373926_0065858 3300035083 Unclassified 1326
189 Ga0373961_0024570 3300035241 Unclassified 1631
190 Ga0373931_0130878 3300035691 Bacteria 1444
191 Ga0373935_0080124 3300035692 Bacteria 2121
192 Ga0373935_0274752 3300035692 Unclassified 1185
193 Ga0373927_0000042 3300035695 Bacteria 94293
194 Ga0373927_0025498 3300035695 Bacteria 3866
195 Ga0373947_0002757 3300035725 Bacteria 10513
196 Ga0373947_0096278 3300035725 Bacteria 1853
197 Ga0373947_0114798 3300035725 Unclassified 1706
198 Ga0373925_0063687 3300037068 Bacteria 2775
199 Ga0373925_0065760 3300037068 Bacteria 2732
200 Ga0373925_0069036 3300037068 Unclassified 2669
201 Ga0395900_0029556 3300037418 Bacteria 5622
202 Ga0395900_0215647 3300037418 Unclassified 1937
203 Ga0395898_0555604 3300037466 Unclassified 1090
204 Ga0436364_1410238 3300037853 Bacteria 6184
205 Ga0436365_1040418 3300039437 Bacteria 2243
206 Ga0451576_0034317 3300045051 Bacteria 5390
207 Ga0451576_0100029 3300045051 Bacteria 3016
208 Ga0451576_0369322 3300045051 Unclassified 1503
209 Ga0466958_0318161 3300045836 Bacteria 1000
210 Ga0466967_0029825 3300045976 Unclassified 4570
211 Ga0495580_0058282 3300046472 Bacteria 2716
212 Ga0495580_0204160 3300046472 Unclassified 1361
213 Ga0495582_0099363 3300046473 Unclassified 1628
214 Ga0495659_0021210 3300046664 Bacteria 2188
215 Ga0495659_0024597 3300046664 Bacteria 2055
216 Ga0495659_0027646 3300046664 Unclassified 1958
217 Ga0495669_0049300 3300046684 Bacteria 1885
218 Ga0495636_0012605 3300047318 Bacteria 3348
219 Ga0495676_0119736 3300047321 Bacteria 1917
220 Ga0495684_0145865 3300047471 Bacteria 1773
221 Ga0495602_0409654 3300048088 Unclassified 965
222 Ga0496109_0042764 3300048912 Unclassified 4106
223 Ga0496111_0025792 3300048914 Unclassified 4148
224 Ga0496112_0237957 3300048915 Unclassified 1774
225 Ga0496113_0100806 3300048916 Unclassified 2238
226 nmdc:mga05p37_120316_c1 3300050507 Bacteria 3226
227 nmdc:mga06r32_319730_c1 3300050510 Unclassified 1537
228 nmdc:mga08y16_2241_c1 3300050511 Bacteria 19824
229 nmdc:mga0n895_1046_c1 3300050512 Bacteria 20148
230 nmdc:mga0n895_165797_c1 3300050512 Bacteria 2241
231 nmdc:mga0n895_214205_c1 3300050512 Unclassified 1956
232 nmdc:mga0n895_25761_c1 3300050512 Bacteria 5561
233 nmdc:mga0n895_44497_c1 3300050512 Bacteria 4329
234 nmdc:mga0n895_462898_c1 3300050512 Unclassified 1280
235 nmdc:mga0n895_486801_c1 3300050512 Bacteria 1244
236 nmdc:mga0rr50_19516_c1 3300050513 Bacteria 4578
237 nmdc:mga0rr50_289681_c1 3300050513 Unclassified 1368
238 nmdc:mga0rr50_316654_c1 3300050513 Bacteria 1307
239 nmdc:mga0rr50_68859_c1 3300050513 Unclassified 2692
240 nmdc:mga0rr50_9013_c1 3300050513 Bacteria 6242
241 nmdc:mga0rr50_97718_c1 3300050513 Bacteria 2300
242 nmdc:mga08x19_68699_c1 3300050514 Bacteria 2306
243 nmdc:mga0a205_227173_c1 3300050515 Bacteria 1751
244 nmdc:mga0a205_43510_c1 3300050515 Bacteria 4330
245 nmdc:mga0a205_656564_c1 3300050515 Unclassified 900
246 2513675990 2513237098 Bacteria 9902361
247 Ga0157378_10267037
248 SwRhRL2b_contig_1647996
249 Ga0058862_10068974
250 Ga0065704_10002853
251 Ga0065715_10107969
252 Ga0065707_10087557
253 Ga0070690_100023323
254 Ga0070690_100440763
255 Ga0070666_10004214
256 Ga0068868_100126313
257 Ga0068868_100183953
258 Ga0070689_100026660
259 Ga0070661_100095783
260 Ga0070661_100114452
261 Ga0070692_10020509
262 Ga0070669_100006326
263 Ga0070675_100349443
264 Ga0070671_100080644
265 Ga0070673_100119626
266 Ga0070673_100364980
267 Ga0070688_100032416
268 Ga0070659_100057974
269 Ga0070709_10071592
270 Ga0070714_100025751
271 Ga0070713_100146291
272 Ga0070705_100028331
273 Ga0070705_100156544
274 Ga0070700_100004410
275 Ga0070694_100015582
276 Ga0070694_100319703
277 Ga0070662_100014872
278 Ga0070681_10000864
279 Ga0068867_100006248
280 Ga0070706_100004855
281 Ga0070707_100002618
282 Ga0070707_100265606
283 Ga0070698_100083704
284 Ga0070698_100091057
285 Ga0070699_100001573
286 Ga0070699_100004316
287 Ga0070699_100357648
288 Ga0070699_100401551
289 Ga0070679_100028847
290 Ga0070697_100042596
291 Ga0070697_100322767
292 Ga0070672_100013234
293 Ga0070672_100358765
294 Ga0070686_100139079
295 Ga0070686_100250370
296 Ga0070696_100029063
297 Ga0070693_100225983
298 Ga0070704_100001721
299 Ga0068855_100097869
300 Ga0068857_100045477
301 Ga0068857_100103891
302 Ga0068859_100000637
303 Ga0068859_100265315
304 Ga0068864_100028384
305 Ga0068861_100002665
306 Ga0068870_10008471
307 Ga0068870_10056975
308 Ga0068863_100031920
309 Ga0068858_100075756
310 Ga0068858_100120720
311 Ga0068860_100001818
312 Ga0068860_100118131
313 Ga0068860_100185982
314 Ga0068862_100004347
315 Ga0068862_100190326
316 Ga0081455_10102375
317 Ga0081539_10031082
318 Ga0070717_10002026
319 Ga0097621_100001170
320 Ga0097621_100054453
321 Ga0075428_100157648
322 Ga0075431_100302623
323 Ga0075433_10001139
324 Ga0075433_10060237
325 Ga0075434_100000126
326 Ga0075434_100017065
327 Ga0075434_100028030
328 Ga0075434_100055996
329 Ga0075434_100154369
330 Ga0075434_100223234
331 Ga0075434_100399076
332 Ga0075434_100509850
333 Ga0075434_100627689
334 Ga0075429_100100750
335 Ga0075436_100108850
336 Ga0097620_100000637
337 Ga0097620_100265326
338 Ga0075435_100008404
339 Ga0075435_100018896
340 Ga0075435_100023623
341 Ga0075435_100050616
342 Ga0099794_10000614
343 Ga0111539_10011670
344 Ga0105245_10000852
345 Ga0105247_10034584
346 Ga0114129_10030210
347 Ga0114129_10057442
348 Ga0114129_10480900
349 Ga0114129_10627239
350 Ga0105243_10042120
351 Ga0105241_10654011
352 Ga0105242_10018284
353 Ga0105248_10000788
354 Ga0105249_10032163
355 Ga0105249_10293016
356 Ga0099796_10004762
357 Ga0105246_10083610
358 Ga0157370_10070561
359 Ga0157370_10367584
360 Ga0157369_10042261
361 Ga0157369_10144066
362 Ga0157374_10564121
363 Ga0163162_10003636
364 Ga0163162_10014070
365 Ga0163162_10703979
366 Ga0157372_10033997
367 Ga0157375_10007605
368 Ga0163163_10008041
369 Ga0163163_10051685
370 Ga0157380_10011959
371 Ga0157380_10337173
372 Ga0182008_10115603
373 Ga0157379_10012418
374 Ga0157376_10001926
375 Ga0157376_10043957
376 Ga0206356_10096535
377 Ga0206356_10656542
378 Ga0206352_10507898
379 Ga0206354_10198382
380 Ga0206354_10416802
381 Ga0213876_10197477
382 Ga0224712_10011212
383 Ga0207680_10001396
384 Ga0207680_10380291
385 Ga0207647_10075416
386 Ga0207643_10005649
387 Ga0207643_10064800
388 Ga0207684_10000723
389 Ga0207684_10039765
390 Ga0207684_10084645
391 Ga0207707_10058718
392 Ga0207662_10007725
393 Ga0207649_10078004
394 Ga0207646_10017944
395 Ga0207646_10057989
396 Ga0207681_10003425
397 Ga0207650_10092883
398 Ga0207659_10164720
399 Ga0207687_10007300
400 Ga0207700_10273846
401 Ga0207700_10391893
402 Ga0207664_10004580
403 Ga0207706_10118956
404 Ga0207686_10014152
405 Ga0207686_10039800
406 Ga0207670_10068695
407 Ga0207669_10155493
408 Ga0207691_10023910
409 Ga0207691_10169109
410 Ga0207711_10003817
411 Ga0207667_10143629
412 Ga0207712_10103962
413 Ga0207668_10024435
414 Ga0207640_10063712
415 Ga0207658_10119495
416 Ga0207677_10026324
417 Ga0207703_10014451
418 Ga0207703_10110223
419 Ga0207708_10008149
420 Ga0207708_10093644
421 Ga0207648_10002160
422 Ga0207676_10002027
423 Ga0207674_10016344
424 Ga0207674_10115599
425 Ga0207675_100005431
426 Ga0207675_100660988
427 Ga0207428_10006089
428 Ga0268265_10000430
429 Ga0268264_10019375
430 Ga0268264_10099156
431 Ga0268264_10391962
432 Ga0265338_10295091
433 Ga0265325_10007834
434 Ga0373926_0065858
435 Ga0373961_0024570
436 Ga0373931_0130878
437 Ga0373935_0080124
438 Ga0373935_0274752
439 Ga0373927_0000042
440 Ga0373927_0025498
441 Ga0373947_0002757
442 Ga0373947_0096278
443 Ga0373947_0114798
444 Ga0373925_0063687
445 Ga0373925_0065760
446 Ga0373925_0069036
447 Ga0395900_0029556
448 Ga0395900_0215647
449 Ga0395898_0555604
450 Ga0436364_1410238
451 Ga0436365_1040418
452 Ga0451576_0034317
453 Ga0451576_0100029
454 Ga0451576_0369322
455 Ga0466958_0318161
456 Ga0466967_0029825
457 Ga0495580_0058282
458 Ga0495580_0204160
459 Ga0495582_0099363
460 Ga0495659_0021210
461 Ga0495659_0024597
462 Ga0495659_0027646
463 Ga0495669_0049300
464 Ga0495636_0012605
465 Ga0495676_0119736
466 Ga0495684_0145865
467 Ga0495602_0409654
468 Ga0496109_0042764
469 Ga0496111_0025792
470 Ga0496112_0237957
471 Ga0496113_0100806
472 nmdc:mga05p37_120316_c1
473 nmdc:mga06r32_319730_c1
474 nmdc:mga08y16_2241_c1
475 nmdc:mga0n895_1046_c1
476 nmdc:mga0n895_165797_c1
477 nmdc:mga0n895_214205_c1
478 nmdc:mga0n895_25761_c1
479 nmdc:mga0n895_44497_c1
480 nmdc:mga0n895_462898_c1
481 nmdc:mga0n895_486801_c1
482 nmdc:mga0rr50_19516_c1
483 nmdc:mga0rr50_289681_c1
484 nmdc:mga0rr50_316654_c1
485 nmdc:mga0rr50_68859_c1
486 nmdc:mga0rr50_9013_c1
487 nmdc:mga0rr50_97718_c1
488 nmdc:mga08x19_68699_c1
489 nmdc:mga0a205_227173_c1
490 nmdc:mga0a205_43510_c1
491 nmdc:mga0a205_656564_c1
492 2513675990

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02679

ComA

(2R)-phospho-3-sulfolactate synthase (ComA)

60

299

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qwg-assembly1.cif.gz_A crystal structure of methanococcus jannaschii phosphosulfolactate synthase 0.8748 7 247
1u83-assembly1.cif.gz_A psl synthase from bacillus subtilis 0.8559 11 244
1qwg-assembly1.cif.gz_A crystal structure of methanococcus jannaschii phosphosulfolactate synthase 0.8385 7 247
1u83-assembly1.cif.gz_A psl synthase from bacillus subtilis 0.7925 11 244
6h3c-assembly1.cif.gz_J cryo-em structure of the brisc complex bound to shmt2 0.7107 86 161
ID Description Score Start End Superfamily
1qwgA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8748 7 247 3.20.20.70
1u83A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8537 11 244 3.20.20.70
1qwgA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8385 7 247 3.20.20.70
1u83A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7899 11 244 3.20.20.70
af_Q653W2_25_286_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7561 3 239 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A2V9DEW1-F1-model_v4 Phosphosulfolactate synthase 0.9814 2 254
AF-A0A2V8XY13-F1-model_v4 Phosphosulfolactate synthase 0.9795 3 254
AF-A0A2V7IUI2-F1-model_v4 Phosphosulfolactate synthase 0.9776 55 250
AF-A0A3B0ZX59-F1-model_v4 Phosphosulfolactate synthase (EC 4.4.1.19) 0.9767 2 253 GO:0043817
AF-A0A2V7FL72-F1-model_v4 Phosphosulfolactate synthase 0.976 49 250

Map