F357867

General Info

Members Datasets Scaffolds Average Seq Length
246 115 492 449

Family's Representative Sequence

Representative Sequence 3300003759|Ga0055525_1000029|Ga0055525_1000029169
Length 525
Sequence MSNRDHGRDDGHRTGAKLLGNTVKTLRRWKREGRLVPANRTTSNGRRYTGSHTRSCAWRLPNRAASLPSAGCPARPWRVTVLLAHRIRIDATASQRDYFARAAGTARRVWNWALAEWNRQAASGRRPNAMALKKAFNRIKYLDPDWLDADGKPWLRAIHRDAHAQPFANLAKAWRRYDAQRRAGQPAHAPRFKKKGRVPDGFYLANDKFRLEGRGAVLPKVGRIVLREALRWHGKIIGASVSREAGHWYLAVQVDVPDHLARRRRTGDAVAGVDLGVTSAATLSSNEKIAAPRPLKAALRRLRIRSRRQSRKLEAAKAAAGIVGRIAKGTRLQASKNRTKGALALARLQARIARVRRDFTHKLTTRLCRENQTVVIEDLNVRGMLANARLARAIADVGFYEFRRQLQYKAARYGTRIVLADRWYPSSKLCSGCGIRNGALVLGERTWTAQHDRDVNAAINLQRLATGALEARTALPEASHAVTRGAAAGPGPAGGGEVTPVRHEHGQQDDSGQEENAVHICTRNR

Samples

Sample ID Description Type Environment
1 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
7 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
8 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
9 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
10 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
11 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
12 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
13 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
14 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
15 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
16 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
17 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
18 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
30 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
31 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
32 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
33 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
34 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
35 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
36 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
37 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
38 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
39 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
40 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
41 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
42 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
43 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
44 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
45 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
46 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
47 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
48 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
49 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
50 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
51 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
52 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
53 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
54 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
55 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
56 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
57 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
58 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
59 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
60 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
61 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
62 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
63 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
64 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
65 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
66 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
67 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
68 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
69 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
70 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
71 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
72 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
73 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
74 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
75 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
76 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
77 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
78 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
79 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
80 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
81 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
82 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
83 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
84 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
85 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
86 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
87 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
88 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
89 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
90 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
91 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
92 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
93 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
94 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
95 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
96 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
105 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
106 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
107 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
108 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
109 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
110 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
113 2643221556 Massilia sp. Root1485 Isolate Unclassified
114 2643221684 Massilia sp. Root133 Isolate Unclassified
115 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.34
Metatranscriptomes 0.41
Isolates 3.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.22
Nodule 0
Rhizoplane 2.85
Rhizosphere 89.84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055525_1000029 3300003759 Bacteria 320663
2 rootL2_10028458 3300003322 Bacteria 13504
3 Ga0007409J51694_1044098 3300003575 Bacteria 1785
4 Ga0070658_10025488 3300005327 Bacteria 4740
5 Ga0070658_10038473 3300005327 Bacteria 3857
6 Ga0070658_10081369 3300005327 Bacteria 2660
7 Ga0070658_10141589 3300005327 Bacteria 2009
8 Ga0070660_100065853 3300005339 Bacteria 2820
9 Ga0070662_100009750 3300005457 Bacteria 6289
10 Ga0068855_100017333 3300005563 Bacteria 8667
11 Ga0068855_100069191 3300005563 Bacteria 4108
12 Ga0068855_100146429 3300005563 Bacteria 2688
13 Ga0068854_100087831 3300005578 Bacteria 2307
14 Ga0068852_100034923 3300005616 Bacteria 4188
15 Ga0068851_10030921 3300005834 Bacteria 2657
16 Ga0105240_10172819 3300009093 Bacteria 2557
17 Ga0105240_10245099 3300009093 Bacteria 2076
18 Ga0105243_10017985 3300009148 Bacteria 5347
19 Ga0105241_10017747 3300009174 Bacteria 5234
20 Ga0105242_10009480 3300009176 Bacteria 7461
21 Ga0105242_10037415 3300009176 Bacteria 3898
22 Ga0105242_10050831 3300009176 Bacteria 3376
23 Ga0105237_10180058 3300009545 Bacteria 2114
24 Ga0105238_10063522 3300009551 Bacteria 3693
25 Ga0157374_10200966 3300013296 Bacteria 1952
26 Ga0209563_100003 3300025230 Bacteria 1932942
27 Ga0209677_100653 3300025253 Bacteria 18276
28 Ga0207656_10029787 3300025321 Bacteria 2251
29 Ga0207705_10000840 3300025909 Bacteria 25150
30 Ga0207705_10001119 3300025909 Bacteria 21799
31 Ga0207705_10003503 3300025909 Bacteria 11949
32 Ga0207705_10016365 3300025909 Bacteria 5318
33 Ga0207705_10129242 3300025909 Bacteria 1879
34 Ga0207695_10284561 3300025913 Bacteria 1546
35 Ga0207690_10027598 3300025932 Bacteria 3589
36 Ga0207706_10018179 3300025933 Bacteria 6324
37 Ga0207706_10101795 3300025933 Bacteria 2527
38 Ga0207706_10136632 3300025933 Bacteria 2156
39 Ga0207686_10005960 3300025934 Bacteria 6543
40 Ga0207686_10026372 3300025934 Bacteria 3389
41 Ga0207686_10038062 3300025934 Bacteria 2908
42 Ga0207709_10007139 3300025935 Bacteria 6236
43 Ga0207667_10006079 3300025949 Bacteria 14670
44 Ga0207667_10007824 3300025949 Bacteria 12774
45 Ga0207667_10008093 3300025949 Bacteria 12535
46 Ga0207667_10023489 3300025949 Bacteria 6789
47 Ga0207667_10242603 3300025949 Bacteria 1844
48 Ga0207698_10074619 3300026142 Bacteria 2707
49 Ga0307408_100123459 3300031548 Bacteria 2009
50 Ga0307416_100143030 3300032002 Bacteria 2178
51 Ga0395899_0001780 3300037312 Bacteria 17854
52 Ga0395899_0013563 3300037312 Bacteria 6229
53 Ga0395899_0020065 3300037312 Bacteria 5071
54 Ga0395900_0001653 3300037418 Bacteria 26100
55 Ga0395900_0010763 3300037418 Bacteria 9357
56 Ga0395900_0025744 3300037418 Bacteria 6021
57 Ga0395900_0036042 3300037418 Bacteria 5098
58 Ga0395900_0098832 3300037418 Bacteria 2998
59 Ga0395898_0028439 3300037466 Bacteria 5601
60 Ga0395898_0035814 3300037466 Bacteria 4932
61 Ga0395898_0058803 3300037466 Bacteria 3741
62 Ga0395898_0093992 3300037466 Bacteria 2881
63 Ga0395905_0015270 3300037471 Bacteria 7302
64 Ga0395901_0001912 3300038443 Bacteria 21440
65 Ga0395901_0196958 3300038443 Bacteria 2112
66 Ga0439455_0014132 3300042012 Bacteria 1818
67 Ga0466969_0011211 3300044656 Bacteria 4745
68 Ga0466972_0063402 3300044658 Bacteria 1770
69 Ga0466966_0038271 3300044684 Bacteria 3091
70 Ga0466966_0043448 3300044684 Bacteria 2880
71 Ga0466966_0059327 3300044684 Bacteria 2416
72 Ga0466964_0010588 3300044706 Bacteria 3480
73 Ga0466968_0023338 3300044735 Bacteria 2519
74 Ga0466957_0020664 3300044842 Bacteria 3875
75 Ga0466957_0064583 3300044842 Bacteria 2252
76 Ga0466959_0027104 3300045049 Bacteria 4250
77 Ga0466959_0102570 3300045049 Bacteria 2047
78 Ga0466958_0030673 3300045836 Bacteria 3195
79 Ga0495627_005262 3300046453 Bacteria 5244
80 Ga0495590_0033065 3300046457 Bacteria 1808
81 Ga0495638_0005957 3300046460 Bacteria 8945
82 Ga0495638_0034453 3300046460 Bacteria 3232
83 Ga0495580_0025576 3300046472 Bacteria 4314
84 Ga0495582_0029827 3300046473 Bacteria 2994
85 Ga0495605_0010560 3300046474 Bacteria 5165
86 Ga0495584_0000069 3300046491 Bacteria 73277
87 Ga0495584_0069115 3300046491 Bacteria 1774
88 Ga0495585_0037837 3300046492 Bacteria 2716
89 Ga0495585_0056232 3300046492 Bacteria 2173
90 Ga0495585_0064077 3300046492 Bacteria 2016
91 Ga0495596_0003595 3300046500 Bacteria 7802
92 Ga0495596_0009825 3300046500 Bacteria 4195
93 Ga0495596_0022878 3300046500 Bacteria 2540
94 Ga0495596_0032127 3300046500 Bacteria 2094
95 Ga0495607_0003138 3300046501 Bacteria 12826
96 Ga0495607_0003692 3300046501 Bacteria 11607
97 Ga0495607_0006533 3300046501 Bacteria 8197
98 Ga0495607_0006607 3300046501 Bacteria 8138
99 Ga0495607_0053685 3300046501 Bacteria 2326
100 Ga0495607_0054307 3300046501 Bacteria 2308
101 Ga0495583_0013856 3300046506 Bacteria 4471
102 Ga0495583_0019255 3300046506 Bacteria 3567
103 Ga0495583_0024763 3300046506 Bacteria 3009
104 Ga0495606_0024133 3300046507 Bacteria 4393
105 Ga0495606_0100386 3300046507 Bacteria 1763
106 Ga0495606_0102104 3300046507 Bacteria 1744
107 Ga0495616_0000048 3300046513 Bacteria 108577
108 Ga0495616_0011397 3300046513 Bacteria 5096
109 Ga0495616_0014362 3300046513 Bacteria 4434
110 Ga0495616_0027883 3300046513 Bacteria 2993
111 Ga0495616_0035579 3300046513 Bacteria 2575
112 Ga0495616_0046756 3300046513 Bacteria 2183
113 Ga0495616_0051312 3300046513 Bacteria 2058
114 Ga0495616_0093667 3300046513 Bacteria 1418
115 Ga0495630_0003779 3300046517 Bacteria 10570
116 Ga0495631_0000399 3300046518 Bacteria 30049
117 Ga0495631_0000447 3300046518 Bacteria 28226
118 Ga0495631_0011436 3300046518 Bacteria 4363
119 Ga0495631_0051225 3300046518 Bacteria 1804
120 Ga0495631_0052166 3300046518 Bacteria 1786
121 Ga0495632_0000828 3300046519 Bacteria 27232
122 Ga0495632_0000934 3300046519 Bacteria 25619
123 Ga0495632_0001672 3300046519 Bacteria 18170
124 Ga0495632_0002332 3300046519 Bacteria 14575
125 Ga0495632_0024685 3300046519 Bacteria 3189
126 Ga0495643_0001641 3300046522 Bacteria 19734
127 Ga0495643_0003755 3300046522 Bacteria 10988
128 Ga0495643_0044283 3300046522 Bacteria 2419
129 Ga0495644_0019024 3300046523 Bacteria 2621
130 Ga0495644_0037296 3300046523 Bacteria 1834
131 Ga0495648_0094357 3300046524 Bacteria 1666
132 Ga0495663_0024632 3300046525 Bacteria 1750
133 Ga0495666_0008158 3300046526 Bacteria 5251
134 Ga0495642_0001585 3300046528 Bacteria 9960
135 Ga0495642_0005780 3300046528 Bacteria 4744
136 Ga0495642_0013868 3300046528 Bacteria 3120
137 Ga0495654_0027492 3300046530 Bacteria 2916
138 Ga0495665_0002406 3300046531 Bacteria 10113
139 Ga0495586_0009935 3300046535 Bacteria 5068
140 Ga0495587_0016953 3300046536 Bacteria 4529
141 Ga0495609_0051510 3300046538 Bacteria 1833
142 Ga0495597_0018945 3300046542 Bacteria 3224
143 Ga0495633_0014116 3300046558 Bacteria 4187
144 Ga0495656_0035403 3300046615 Bacteria 2051
145 Ga0495668_0000435 3300046616 Bacteria 53680
146 Ga0495668_0000707 3300046616 Bacteria 40246
147 Ga0495668_0003746 3300046616 Bacteria 11160
148 Ga0495668_0021966 3300046616 Bacteria 3651
149 Ga0495634_0003814 3300046642 Bacteria 11979
150 Ga0495611_0031933 3300046648 Bacteria 2320
151 Ga0495625_0019245 3300046660 Bacteria 5302
152 Ga0495625_0044445 3300046660 Bacteria 3216
153 Ga0495625_0072229 3300046660 Bacteria 2420
154 Ga0495625_0107372 3300046660 Bacteria 1911
155 Ga0495661_0000190 3300046665 Bacteria 71131
156 Ga0495661_0001279 3300046665 Bacteria 21554
157 Ga0495661_0002578 3300046665 Bacteria 13905
158 Ga0495661_0002617 3300046665 Bacteria 13793
159 Ga0495661_0002718 3300046665 Bacteria 13479
160 Ga0495661_0004034 3300046665 Bacteria 10697
161 Ga0495661_0004282 3300046665 Bacteria 10357
162 Ga0495661_0007671 3300046665 Bacteria 7516
163 Ga0495661_0016532 3300046665 Bacteria 4888
164 Ga0495661_0031418 3300046665 Bacteria 3370
165 Ga0495661_0035141 3300046665 Bacteria 3148
166 Ga0495661_0046825 3300046665 Bacteria 2637
167 Ga0495661_0052471 3300046665 Bacteria 2457
168 Ga0495588_0013869 3300046674 Bacteria 3847
169 Ga0495588_0032940 3300046674 Bacteria 2614
170 Ga0495670_0009302 3300046691 Bacteria 4836
171 Ga0495670_0023625 3300046691 Bacteria 3034
172 Ga0495670_0032147 3300046691 Bacteria 2609
173 Ga0495670_0052039 3300046691 Bacteria 2049
174 Ga0495670_0071194 3300046691 Bacteria 1760
175 Ga0495671_0017682 3300046692 Bacteria 3791
176 Ga0495649_0000885 3300046694 Bacteria 23904
177 Ga0495649_0016287 3300046694 Bacteria 4214
178 Ga0495649_0094069 3300046694 Bacteria 1595
179 Ga0495589_0033099 3300046794 Bacteria 2597
180 Ga0495589_0062909 3300046794 Bacteria 1820
181 Ga0495660_0005163 3300046810 Bacteria 7848
182 Ga0495660_0007122 3300046810 Bacteria 6589
183 Ga0495660_0015592 3300046810 Bacteria 4390
184 Ga0495660_0026160 3300046810 Bacteria 3309
185 Ga0495660_0075410 3300046810 Bacteria 1779
186 Ga0495660_0094959 3300046810 Bacteria 1543
187 Ga0495672_0054250 3300047320 Bacteria 2344
188 Ga0495672_0062588 3300047320 Bacteria 2140
189 Ga0495683_0011508 3300047323 Bacteria 4652
190 Ga0495683_0017138 3300047323 Bacteria 3757
191 Ga0495687_000108 3300047443 Bacteria 126739
192 Ga0495687_026808 3300047443 Bacteria 2706
193 Ga0495675_0076090 3300047444 Bacteria 2115
194 Ga0495677_0000609 3300047445 Bacteria 14618
195 Ga0495677_0008361 3300047445 Bacteria 3847
196 Ga0495677_0009462 3300047445 Bacteria 3599
197 Ga0495677_0026134 3300047445 Bacteria 2118
198 Ga0495677_0037674 3300047445 Bacteria 1766
199 Ga0495679_001132 3300047446 Bacteria 16003
200 Ga0495679_007618 3300047446 Bacteria 4497
201 Ga0495685_005734 3300047447 Bacteria 4053
202 Ga0495681_0002458 3300047470 Bacteria 13219
203 Ga0495681_0014906 3300047470 Bacteria 4428
204 Ga0495681_0045896 3300047470 Bacteria 2087
205 Ga0495686_0000140 3300047472 Bacteria 144956
206 Ga0495602_0001954 3300048088 Bacteria 20668
207 Ga0495602_0010861 3300048088 Bacteria 9439
208 Ga0495626_0002544 3300048091 Bacteria 12528
209 Ga0495626_0007986 3300048091 Bacteria 5846
210 Ga0495626_0012841 3300048091 Bacteria 4372
211 Ga0495626_0016763 3300048091 Bacteria 3714
212 Ga0495626_0017110 3300048091 Bacteria 3668
213 Ga0495626_0019684 3300048091 Bacteria 3372
214 Ga0495626_0023578 3300048091 Bacteria 3028
215 Ga0495626_0047408 3300048091 Bacteria 1997
216 Ga0495626_0066854 3300048091 Bacteria 1624
217 Ga0496102_0028449 3300048905 Bacteria 4992
218 Ga0496103_0017304 3300048906 Bacteria 4314
219 Ga0496107_0026918 3300048910 Bacteria 4081
220 Ga0496109_0285838 3300048912 Bacteria 1554
221 Ga0496112_0108619 3300048915 Bacteria 2744
222 Ga0496113_0195853 3300048916 Bacteria 1605
223 Ga0496114_0182490 3300048917 Bacteria 1833
224 Ga0496122_0000248 3300048925 Bacteria 121158
225 Ga0496122_0004347 3300048925 Bacteria 17708
226 Ga0496122_0005144 3300048925 Bacteria 15777
227 Ga0496123_0000122 3300048926 Bacteria 158966
228 Ga0496123_0002231 3300048926 Bacteria 24567
229 Ga0496123_0006687 3300048926 Bacteria 11109
230 Ga0496123_0006741 3300048926 Bacteria 11046
231 Ga0496124_0011071 3300048927 Bacteria 9055
232 Ga0496125_0003268 3300048928 Bacteria 19942
233 Ga0496126_0179406 3300048929 Bacteria 1800
234 Ga0495678_029607 3300049459 Bacteria 2297
235 Ga0495682_0007609 3300049460 Bacteria 4302
236 Ga0495682_0021718 3300049460 Bacteria 2404
237 Ga0501043_0165098 3300049579 Bacteria 1729
238 Ga0501217_021145 3300049661 Bacteria 1534
239 2643797833 2643221556 Bacteria 7251154
240 2643798074 2643221556 Bacteria 7251154
241 2644473011 2643221684 Bacteria 7145183
242 2644473252 2643221684 Bacteria 7145183
243 8047677282 8047673197 Bacteria 7395230
244 8047677524 8047673197 Bacteria 7395230
245 8047677940 8047673197 Bacteria 7395230
246 8047678079 8047673197 Bacteria 7395230
247 Ga0055525_1000029
248 rootL2_10028458
249 Ga0007409J51694_1044098
250 Ga0070658_10025488
251 Ga0070658_10038473
252 Ga0070658_10081369
253 Ga0070658_10141589
254 Ga0070660_100065853
255 Ga0070662_100009750
256 Ga0068855_100017333
257 Ga0068855_100069191
258 Ga0068855_100146429
259 Ga0068854_100087831
260 Ga0068852_100034923
261 Ga0068851_10030921
262 Ga0105240_10172819
263 Ga0105240_10245099
264 Ga0105243_10017985
265 Ga0105241_10017747
266 Ga0105242_10009480
267 Ga0105242_10037415
268 Ga0105242_10050831
269 Ga0105237_10180058
270 Ga0105238_10063522
271 Ga0157374_10200966
272 Ga0209563_100003
273 Ga0209677_100653
274 Ga0207656_10029787
275 Ga0207705_10000840
276 Ga0207705_10001119
277 Ga0207705_10003503
278 Ga0207705_10016365
279 Ga0207705_10129242
280 Ga0207695_10284561
281 Ga0207690_10027598
282 Ga0207706_10018179
283 Ga0207706_10101795
284 Ga0207706_10136632
285 Ga0207686_10005960
286 Ga0207686_10026372
287 Ga0207686_10038062
288 Ga0207709_10007139
289 Ga0207667_10006079
290 Ga0207667_10007824
291 Ga0207667_10008093
292 Ga0207667_10023489
293 Ga0207667_10242603
294 Ga0207698_10074619
295 Ga0307408_100123459
296 Ga0307416_100143030
297 Ga0395899_0001780
298 Ga0395899_0013563
299 Ga0395899_0020065
300 Ga0395900_0001653
301 Ga0395900_0010763
302 Ga0395900_0025744
303 Ga0395900_0036042
304 Ga0395900_0098832
305 Ga0395898_0028439
306 Ga0395898_0035814
307 Ga0395898_0058803
308 Ga0395898_0093992
309 Ga0395905_0015270
310 Ga0395901_0001912
311 Ga0395901_0196958
312 Ga0439455_0014132
313 Ga0466969_0011211
314 Ga0466972_0063402
315 Ga0466966_0038271
316 Ga0466966_0043448
317 Ga0466966_0059327
318 Ga0466964_0010588
319 Ga0466968_0023338
320 Ga0466957_0020664
321 Ga0466957_0064583
322 Ga0466959_0027104
323 Ga0466959_0102570
324 Ga0466958_0030673
325 Ga0495627_005262
326 Ga0495590_0033065
327 Ga0495638_0005957
328 Ga0495638_0034453
329 Ga0495580_0025576
330 Ga0495582_0029827
331 Ga0495605_0010560
332 Ga0495584_0000069
333 Ga0495584_0069115
334 Ga0495585_0037837
335 Ga0495585_0056232
336 Ga0495585_0064077
337 Ga0495596_0003595
338 Ga0495596_0009825
339 Ga0495596_0022878
340 Ga0495596_0032127
341 Ga0495607_0003138
342 Ga0495607_0003692
343 Ga0495607_0006533
344 Ga0495607_0006607
345 Ga0495607_0053685
346 Ga0495607_0054307
347 Ga0495583_0013856
348 Ga0495583_0019255
349 Ga0495583_0024763
350 Ga0495606_0024133
351 Ga0495606_0100386
352 Ga0495606_0102104
353 Ga0495616_0000048
354 Ga0495616_0011397
355 Ga0495616_0014362
356 Ga0495616_0027883
357 Ga0495616_0035579
358 Ga0495616_0046756
359 Ga0495616_0051312
360 Ga0495616_0093667
361 Ga0495630_0003779
362 Ga0495631_0000399
363 Ga0495631_0000447
364 Ga0495631_0011436
365 Ga0495631_0051225
366 Ga0495631_0052166
367 Ga0495632_0000828
368 Ga0495632_0000934
369 Ga0495632_0001672
370 Ga0495632_0002332
371 Ga0495632_0024685
372 Ga0495643_0001641
373 Ga0495643_0003755
374 Ga0495643_0044283
375 Ga0495644_0019024
376 Ga0495644_0037296
377 Ga0495648_0094357
378 Ga0495663_0024632
379 Ga0495666_0008158
380 Ga0495642_0001585
381 Ga0495642_0005780
382 Ga0495642_0013868
383 Ga0495654_0027492
384 Ga0495665_0002406
385 Ga0495586_0009935
386 Ga0495587_0016953
387 Ga0495609_0051510
388 Ga0495597_0018945
389 Ga0495633_0014116
390 Ga0495656_0035403
391 Ga0495668_0000435
392 Ga0495668_0000707
393 Ga0495668_0003746
394 Ga0495668_0021966
395 Ga0495634_0003814
396 Ga0495611_0031933
397 Ga0495625_0019245
398 Ga0495625_0044445
399 Ga0495625_0072229
400 Ga0495625_0107372
401 Ga0495661_0000190
402 Ga0495661_0001279
403 Ga0495661_0002578
404 Ga0495661_0002617
405 Ga0495661_0002718
406 Ga0495661_0004034
407 Ga0495661_0004282
408 Ga0495661_0007671
409 Ga0495661_0016532
410 Ga0495661_0031418
411 Ga0495661_0035141
412 Ga0495661_0046825
413 Ga0495661_0052471
414 Ga0495588_0013869
415 Ga0495588_0032940
416 Ga0495670_0009302
417 Ga0495670_0023625
418 Ga0495670_0032147
419 Ga0495670_0052039
420 Ga0495670_0071194
421 Ga0495671_0017682
422 Ga0495649_0000885
423 Ga0495649_0016287
424 Ga0495649_0094069
425 Ga0495589_0033099
426 Ga0495589_0062909
427 Ga0495660_0005163
428 Ga0495660_0007122
429 Ga0495660_0015592
430 Ga0495660_0026160
431 Ga0495660_0075410
432 Ga0495660_0094959
433 Ga0495672_0054250
434 Ga0495672_0062588
435 Ga0495683_0011508
436 Ga0495683_0017138
437 Ga0495687_000108
438 Ga0495687_026808
439 Ga0495675_0076090
440 Ga0495677_0000609
441 Ga0495677_0008361
442 Ga0495677_0009462
443 Ga0495677_0026134
444 Ga0495677_0037674
445 Ga0495679_001132
446 Ga0495679_007618
447 Ga0495685_005734
448 Ga0495681_0002458
449 Ga0495681_0014906
450 Ga0495681_0045896
451 Ga0495686_0000140
452 Ga0495602_0001954
453 Ga0495602_0010861
454 Ga0495626_0002544
455 Ga0495626_0007986
456 Ga0495626_0012841
457 Ga0495626_0016763
458 Ga0495626_0017110
459 Ga0495626_0019684
460 Ga0495626_0023578
461 Ga0495626_0047408
462 Ga0495626_0066854
463 Ga0496102_0028449
464 Ga0496103_0017304
465 Ga0496107_0026918
466 Ga0496109_0285838
467 Ga0496112_0108619
468 Ga0496113_0195853
469 Ga0496114_0182490
470 Ga0496122_0000248
471 Ga0496122_0004347
472 Ga0496122_0005144
473 Ga0496123_0000122
474 Ga0496123_0002231
475 Ga0496123_0006687
476 Ga0496123_0006741
477 Ga0496124_0011071
478 Ga0496125_0003268
479 Ga0496126_0179406
480 Ga0495678_029607
481 Ga0495682_0007609
482 Ga0495682_0021718
483 Ga0501043_0165098
484 Ga0501217_021145
485 2643797833
486 2643798074
487 2644473011
488 2644473252
489 8047677282
490 8047677524
491 8047677940
492 8047678079

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01385

OrfB_IS605

Probable transposase

249

388

0.94

PF12323

HTH_OrfB_IS605

Helix-turn-helix domain

81

126

0.93

PF07282

OrfB_Zn_ribbon

Putative transposase DNA-binding domain

399

461

0.89

PF13411

MerR_1

MerR HTH family regulatory protein

14

54

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ex9-assembly1.cif.gz_A isdra2 tnpb in complex with rerna and cognate dna, conformation 2 (ruvc domain unresolved) 0.8721 1 173
8ex9-assembly1.cif.gz_A isdra2 tnpb in complex with rerna and cognate dna, conformation 2 (ruvc domain unresolved) 0.8574 1 173
8bf8-assembly1.cif.gz_A isdra2 tnpb in complex with rerna 0.8565 1 394
8exa-assembly1.cif.gz_A isdra2 tnpb in complex with rerna and cognate dna, conformation 1 (ruvc domain resolved) 0.8559 2 394
8exa-assembly1.cif.gz_A isdra2 tnpb in complex with rerna and cognate dna, conformation 1 (ruvc domain resolved) 0.8465 2 394
ID Description Score Start End Superfamily
af_I1LAL2_2_108_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.7382 215 287 1.20.1270.60
af_Q6R5P0_766_923_3.40.50.10140 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Toll/interleukin-1 receptor homology (TIR) domain 0.7374 282 339 3.40.50.10140
1zkeB00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.6906 214 279 1.20.58.90
af_Q9VIA4_813_960_3.40.50.10140 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Toll/interleukin-1 receptor homology (TIR) domain 0.6629 280 339 3.40.50.10140
af_F4IUF0_1_170_3.40.50.10140 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Toll/interleukin-1 receptor homology (TIR) domain 0.6467 281 339 3.40.50.10140
ID Description Score Start End GO Terms
AF-A0A176S176-F1-model_v4 Transposase, IS605 OrfB family 0.9386 1 176
AF-A0A4Q9UUG5-F1-model_v4 deleted 0.9318 1 163
AF-A0A4Q9UUG5-F1-model_v4 deleted 0.9203 1 163
AF-A0A098U108-F1-model_v4 deleted 0.9171 20 125
AF-A0A098U108-F1-model_v4 deleted 0.9089 20 125

Map