F357224

General Info

Members Datasets Scaffolds Average Seq Length
245 224 151 1130

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10014105|Ga0081539_100141053
Length 1126
Sequence MERQENASNSGRGVLALPVSRLRLSLPGTGRGKMDVSDNGTDPMATPLMLSRRFAPLFWCQFFSAFSDNFLKNALVFLILFKLSGSSTDALITLAAATFIAPYFFLSAFGGEMADRYDKSIIAQRLKLAEIGIAAIAVAGFWLHSIVILFIALFLFGVIGALFGPIKYGILPDHLARSELPAGNALVEGATFLAILLGTIVGGLAAKDGGDPASFAALMMVFSLLCYGSALFIPRTGEAAPDLKISTNILKSTIGLINHLRSDRRLWWGALVVSWFWLVGAVVLSLMPVLVKNVLGGNEEVVTLFLAVFSIAIAVGSLLAAWLASGRIILLPTVVGAVLIGIFSIDLGWATYGRVSVDLAGLAIAGGLFIVPAFSALQAWAGADSRARVIAANNVLNAAFMVTMPARAAADFLSIVFRAFYRVEVKGLENMQKGGHNPIIALNHVSFLDAALAVSLLGRDPVFAIDSGIAKRWWVKPFLRFTRAMPLDPTKPMATRTLINAVRAGETLIIFPEGRITVTGSLMKVYDGAGLIADKSDAMVIPVRIDGLEATPFSRLSRGQVRRRWFPKVKVTVLEPVKLSVDPNLRGKYRRQAAGAALYEVMSNLVFSTMSTDRTVVEALIEAAHIHGMNHVIVEDPTSGALKYRRLLLGVSILGSKLMHLAEEGKAVGVMLPNANGAVVTLFGLMSGGRVPAMINFTAGTANILAACKAAQVDTIVTSRAFIERGKLGALIESLEKDIRFVYLEDVRATIGILDKIRGILRSKRPLVKRKPDDWAAILFTSGSEGVPKGVVLSHRNMLANCAQATARVDFGRTDKVFNVLPVFHSFGLTVGVVLPLVSGVRIFLYPSPLHYRTVPELIYGVNATIMFGTDTFLNGYARAGHAYDFRSLRYILAGAEPVKESTRRTYLEKFGLRILEGYGVTETAPVLAINTPMFNKFGSVGRLLPGMEARLEKVEGVDEGGRLYVRGPNVMLGYLKAENPGVLEPPVEGWHDTGDIVTIDAQGFITIKGRAKRFAKIAGEMVSLSTVESMAAALWPQAMSVAVAIPDARKGERVVLLTTQADALRETFQKHAKALGATELAVPADLRVIDKVPLLGSGKTDYVAATALAKELAAGPAAPAEQQVA

Samples

Sample ID Description Type Environment
1 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
2 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
3 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
4 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
5 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
6 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
7 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
8 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
9 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
10 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
11 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
12 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
13 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
14 2643221557 Ensifer sp. Root558 Isolate Unclassified
15 2643221626 Ensifer sp. Root31 Isolate Unclassified
16 2643221723 Ensifer sp. Root278 Isolate Unclassified
17 2643221734 Bosea sp. Root670 Isolate Unclassified
18 2643221736 Bosea sp. Root483D1 Isolate Unclassified
19 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
20 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
21 2738541293 Rhizobium sp. GV031 Isolate Unclassified
22 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
23 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
24 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
25 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
26 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
27 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
28 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
29 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
30 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
31 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
32 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
33 2844163670 Ensifer sp. 1H6 Isolate Unclassified
34 2847670302 Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1 Isolate Nodule
35 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
36 2856314179 Mesorhizobium sp. M3A.F.Ca.ET.175.01.1.1 Isolate Nodule
37 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
38 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
39 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
40 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
41 2878035449 Mesorhizobium sp. M3A.F.Ca.ET.201.01.1.1 Isolate Nodule
42 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
43 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
44 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
45 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
46 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
47 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
48 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
49 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
50 2902330777 Methylobacterium sp. 2A Isolate Unclassified
51 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
52 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
53 2906414383 Mesorhizobium sp. M3A.F.Ca.ET.174.01.1.1 Isolate Nodule
54 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
55 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
56 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
57 2924718760 Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 Isolate Nodule
58 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
59 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
60 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
61 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
62 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
63 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
64 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
65 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
66 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
67 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
68 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
69 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
70 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
71 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
72 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
73 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
74 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
75 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
76 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
77 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
78 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
79 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
80 2977828996 Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 Isolate Nodule
81 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
82 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
83 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
84 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
85 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
86 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
87 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
88 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
89 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
90 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
91 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
92 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
93 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
94 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
95 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
96 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
97 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
98 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
99 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
100 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
101 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
102 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
103 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
104 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
105 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
106 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
107 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
108 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
109 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
110 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
111 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
112 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
113 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
114 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
115 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
116 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
117 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
118 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
119 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
120 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
121 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
122 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
123 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
124 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
125 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
127 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
128 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
129 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
131 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
132 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
155 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
156 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
157 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
158 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
159 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
160 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
161 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
162 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
163 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
164 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
165 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
166 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
167 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
168 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
169 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
170 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
171 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
172 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
173 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
174 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
175 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
176 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
177 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
178 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
179 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
180 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
181 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
182 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
183 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
184 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
185 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
186 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
187 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
188 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
189 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
190 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
191 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
192 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
193 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
194 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
195 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
196 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
197 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
198 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
199 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
200 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
201 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
203 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
204 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
206 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
207 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
208 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
209 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
210 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
211 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
212 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
213 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
214 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
215 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
216 641522639 Methylobacterium sp. 4-46 Isolate Nodule
217 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
218 8002060224 Methylocystis sp. Sn-Cys Isolate Unclassified
219 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
220 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
221 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
222 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
223 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
224 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 61.63
Metatranscriptomes 0
Isolates 38.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.06
Nodule 23.27
Rhizoplane 9.8
Rhizosphere 40.82
Stem 0
Stem Tuber 0
Unclassified 13.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24750J21931_1000736 3300002070 Bacteria 4686
2 JGI24744J21845_10001447 3300002077 Bacteria 4722
3 JGI25162J39368_1000222 3300002737 Bacteria 58781
4 JGI25150J39212_1000016 3300002774 Bacteria 153945
5 JGI25159J45721_1000041 3300002987 Bacteria 66706
6 JGI25151J46595_10000073 3300003187 Bacteria 136684
7 JGI25165J46597_1001319 3300003214 Bacteria 14034
8 JGI25153J46596_10001135 3300003215 Bacteria 16110
9 JGI25160J50197_1000133 3300003354 Bacteria 66706
10 Ga0055526_1005723 3300003771 Bacteria 7028
11 Ga0055524_1000975 3300003775 Bacteria 17934
12 Ga0055543_1000119 3300004625 Bacteria 66744
13 Ga0065165_1000423 3300005262 Bacteria 66744
14 Ga0070670_100024922 3300005331 Bacteria 5146
15 Ga0070689_100000823 3300005340 Bacteria 19216
16 Ga0070673_100001290 3300005364 Bacteria 14598
17 Ga0070688_100002337 3300005365 Bacteria 9568
18 Ga0070688_100009277 3300005365 Bacteria 5373
19 Ga0070709_10003578 3300005434 Bacteria 8345
20 Ga0070713_100017533 3300005436 Bacteria 5417
21 Ga0070713_100029620 3300005436 Bacteria 4338
22 Ga0070700_100002912 3300005441 Bacteria 8782
23 Ga0070663_100022173 3300005455 Bacteria 4240
24 Ga0070679_100013650 3300005530 Bacteria 7782
25 Ga0068852_100010507 3300005616 Bacteria 6923
26 Ga0068864_100024614 3300005618 Bacteria 5065
27 Ga0068858_100025546 3300005842 Bacteria 5496
28 Ga0068860_100030473 3300005843 Bacteria 5188
29 Ga0081455_10001183 3300005937 Bacteria 32679
30 Ga0081538_10002208 3300005981 Bacteria 19292
31 Ga0081539_10014105 3300005985 Bacteria 5941
32 Ga0075364_10025160 3300006051 Bacteria 3787
33 Ga0075435_100045104 3300007076 Bacteria 3532
34 Ga0114129_10029138 3300009147 Bacteria 7820
35 Ga0171462_1055 3300013250 Bacteria 30171
36 Ga0213875_10000074 3300021388 Bacteria 118349
37 Ga0209437_100040 3300025233 Bacteria 448096
38 Ga0207425_1000054 3300025245 Bacteria 153997
39 Ga0209129_1000108 3300025258 Bacteria 153997
40 Ga0209233_1000051 3300025261 Bacteria 447617
41 Ga0209130_1000257 3300025284 Bacteria 66804
42 Ga0209676_1000680 3300025292 Bacteria 48191
43 Ga0209025_1000189 3300025294 Bacteria 153997
44 Ga0209025_1000301 3300025294 Bacteria 110450
45 Ga0209564_1000449 3300025295 Bacteria 70234
46 Ga0209758_1000162 3300025297 Bacteria 153997
47 Ga0209758_1000760 3300025297 Bacteria 46690
48 Ga0209050_1002323 3300025298 Bacteria 16733
49 Ga0209256_1000089 3300025299 Bacteria 214426
50 Ga0209256_1001649 3300025299 Bacteria 21718
51 Ga0207426_1000413 3300025302 Bacteria 70783
52 Ga0209051_1003258 3300025303 Bacteria 10783
53 Ga0207710_10006125 3300025900 Bacteria 5152
54 Ga0207688_10002461 3300025901 Bacteria 9960
55 Ga0207680_10010209 3300025903 Bacteria 4690
56 Ga0207647_10011095 3300025904 Bacteria 6332
57 Ga0207643_10000233 3300025908 Bacteria 38972
58 Ga0207684_10009926 3300025910 Bacteria 8393
59 Ga0207693_10008217 3300025915 Bacteria 8548
60 Ga0207662_10001110 3300025918 Bacteria 12632
61 Ga0207659_10026920 3300025926 Bacteria 3886
62 Ga0207700_10011128 3300025928 Bacteria 5723
63 Ga0207706_10003976 3300025933 Bacteria 14004
64 Ga0207670_10001432 3300025936 Bacteria 12527
65 Ga0207689_10028272 3300025942 Bacteria 4691
66 Ga0207651_10003620 3300025960 Bacteria 7616
67 Ga0207678_10031616 3300026067 Bacteria 4616
68 Ga0207708_10000911 3300026075 Bacteria 22215
69 Ga0207702_10031977 3300026078 Bacteria 4389
70 Ga0207676_10024568 3300026095 Bacteria 4460
71 Ga0207675_100021570 3300026118 Bacteria 5998
72 Ga0207683_10004734 3300026121 Bacteria 11725
73 Ga0268264_10021359 3300028381 Bacteria 5285
74 Ga0265332_10001854 3300031238 Bacteria 11225
75 Ga0265328_10000008 3300031239 Bacteria 208282
76 Ga0265325_10000031 3300031241 Bacteria 102905
77 Ga0265340_10005856 3300031247 Bacteria 6803
78 Ga0265331_10000889 3300031250 Bacteria 24285
79 Ga0265342_10000146 3300031712 Bacteria 80151
80 Ga0373943_0000185 3300035170 Bacteria 24985
81 Ga0373946_0001621 3300035171 Bacteria 7835
82 Ga0373935_0003389 3300035692 Bacteria 9255
83 Ga0373927_0000434 3300035695 Bacteria 32038
84 Ga0373927_0009924 3300035695 Bacteria 6382
85 Ga0373937_0034015 3300036401 Bacteria 4634
86 Ga0316584_0011580 3300036712 Bacteria 6201
87 Ga0373925_0004820 3300037068 Bacteria 10163
88 Ga0436364_1140800 3300037853 Bacteria 21361
89 Ga0237819_01906 3300038705 Bacteria 4756
90 Ga0451576_0012958 3300045051 Bacteria 9344
91 Ga0495638_0000031 3300046460 Bacteria 296510
92 Ga0495638_0000053 3300046460 Bacteria 199398
93 Ga0495662_0002257 3300046476 Bacteria 9716
94 Ga0495664_0003373 3300046477 Bacteria 8682
95 Ga0495618_0003711 3300046514 Bacteria 9458
96 Ga0495643_0003413 3300046522 Bacteria 11668
97 Ga0495643_0005205 3300046522 Bacteria 8860
98 Ga0495640_0006568 3300046533 Bacteria 9188
99 Ga0495586_0005871 3300046535 Bacteria 6562
100 Ga0495622_0003033 3300046557 Bacteria 7966
101 Ga0495633_0002078 3300046558 Bacteria 14407
102 Ga0495633_0014488 3300046558 Bacteria 4121
103 Ga0495625_0000775 3300046660 Bacteria 44423
104 Ga0495613_0005693 3300046689 Bacteria 9339
105 Ga0495613_0010848 3300046689 Bacteria 6760
106 Ga0495624_0000948 3300046690 Bacteria 22863
107 Ga0495660_0000001 3300046810 Bacteria 1431121
108 Ga0495674_0006441 3300047319 Bacteria 11254
109 Ga0495681_0000079 3300047470 Bacteria 85095
110 Ga0495686_0004268 3300047472 Bacteria 11849
111 Ga0496101_0000610 3300048904 Bacteria 21834
112 Ga0496104_0000436 3300048907 Bacteria 36214
113 Ga0496104_0003562 3300048907 Bacteria 13436
114 Ga0496104_0004893 3300048907 Bacteria 11681
115 Ga0496105_0027492 3300048908 Bacteria 4648
116 Ga0496106_0010368 3300048909 Bacteria 6885
117 Ga0496107_0003740 3300048910 Bacteria 10219
118 Ga0496107_0013188 3300048910 Bacteria 5774
119 Ga0496108_0003447 3300048911 Bacteria 12687
120 Ga0496109_0026038 3300048912 Bacteria 5213
121 Ga0496110_0000498 3300048913 Bacteria 26638
122 Ga0496110_0044489 3300048913 Bacteria 3877
123 Ga0496111_0007935 3300048914 Bacteria 7000
124 Ga0496111_0012132 3300048914 Bacteria 5827
125 Ga0496111_0022440 3300048914 Bacteria 4420
126 Ga0496112_0002298 3300048915 Bacteria 15309
127 Ga0496112_0006934 3300048915 Bacteria 9999
128 Ga0496112_0010849 3300048915 Bacteria 8290
129 Ga0496112_0016869 3300048915 Bacteria 6851
130 Ga0496112_0038600 3300048915 Bacteria 4664
131 Ga0496114_0019166 3300048917 Bacteria 5544
132 Ga0496115_0035092 3300048918 Bacteria 3966
133 Ga0496121_0000033 3300048924 Bacteria 377542
134 Ga0496123_0023722 3300048926 Bacteria 4687
135 Ga0496125_0000152 3300048928 Bacteria 153295
136 Ga0501046_0000011 3300049580 Bacteria 326457
137 Ga0501072_0002839 3300049588 Bacteria 12998
138 Ga0501073_0016033 3300049589 Bacteria 5431
139 Ga0501035_0033214 3300049822 Bacteria 4692
140 Ga0501044_0001075 3300049823 Bacteria 32629
141 nmdc:mga0k408_8220_c1 3300050493 Bacteria 5593
142 nmdc:mga05p37_26476_c1 3300050507 Bacteria 5956
143 nmdc:mga05p37_5608_c1 3300050507 Bacteria 14752
144 nmdc:mga0n895_33868_c1 3300050512 Bacteria 4912
145 Ga0495601_0009511 3300053077 Bacteria 5753
146 Ga0495612_0000688 3300053078 Bacteria 13638
147 Ga0495619_0002604 3300053085 Bacteria 11784
148 Ga0500590_000252 3300053148 Bacteria 16558
149 Ga0500624_000938 3300053157 Bacteria 6081
150 Ga0500636_0016698 3300053177 Bacteria 4329
151 Ga0501082_0002683 3300060353 Bacteria 15546

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050507 nmdc:mga05p37_26476_c1 nmdc:mga05p37_26476_c1_3162_5930 922
2 3300048910 Ga0496107_0003740 Ga0496107_0003740_23_2884 944
3 3300050512 nmdc:mga0n895_33868_c1 nmdc:mga0n895_33868_c1_1983_4883 962
4 3300005985 Ga0081539_10014105 Ga0081539_100141053 1081
5 iso_pu_bacteria 3003665799 3003669813 1081
6 3300048904 Ga0496101_0000610 Ga0496101_0000610_297_3551 1083
7 iso_pu_bacteria 2977828996 2977831866 1092
8 3300036401 Ga0373937_0034015 Ga0373937_0034015_62_3481 1099
9 3300006051 Ga0075364_10025160 Ga0075364_100251602 1100
10 3300005530 Ga0070679_100013650 Ga0070679_1000136501 1107
11 3300003775 Ga0055524_1000975 Ga0055524_10009757 1113
12 3300025299 Ga0209256_1000089 Ga0209256_1000089106 1113
13 3300053177 Ga0500636_0016698 Ga0500636_0016698_333_3731 1116
14 iso_pu_bacteria 2842482326 2842484024 1122
15 iso_pu_bacteria 2842509118 2842513529 1122
16 iso_pu_bacteria 2913308742 2913313836 1122
17 3300046660 Ga0495625_0000775 Ga0495625_0000775_34903_38283 1125
18 3300005364 Ga0070673_100001290 Ga0070673_1000012903 1126
19 3300025960 Ga0207651_10003620 Ga0207651_100036203 1126
20 3300046558 Ga0495633_0014488 Ga0495633_0014488_290_3670 1126
21 3300048915 Ga0496112_0002298 Ga0496112_0002298_7734_11141 1126
22 3300053157 Ga0500624_000938 Ga0500624_000938_748_4128 1126
23 iso_pu_bacteria 2523231067 2523470691 1126
24 iso_pu_bacteria 2738543031 2739352011 1126
25 3300002987 JGI25159J45721_1000041 JGI25159J45721_100004150 1127
26 3300003354 JGI25160J50197_1000133 JGI25160J50197_100013350 1127
27 3300003771 Ga0055526_1005723 Ga0055526_10057235 1127
28 3300004625 Ga0055543_1000119 Ga0055543_100011913 1127
29 3300005262 Ga0065165_1000423 Ga0065165_100042313 1127
30 3300021388 Ga0213875_10000074 Ga0213875_1000007480 1127
31 3300037853 Ga0436364_1140800 Ga0436364_1140800_38_3448 1127
32 iso_pu_bacteria 2513237146 2513924966 1127
33 iso_pu_bacteria 2582581315 2585324809 1127
34 iso_pu_bacteria 2582581316 2585332239 1127
35 iso_pu_bacteria 2585427527 2585531994 1127
36 iso_pu_bacteria 2585427530 2585552354 1127
37 iso_pu_bacteria 2599185170 2599416531 1127
38 iso_pu_bacteria 2615840626 2616307867 1127
39 iso_pu_bacteria 2617270742 2617381818 1127
40 iso_pu_bacteria 2667528174 2671112869 1127
41 iso_pu_bacteria 2738541293 2738804025 1127
42 iso_pu_bacteria 2738541317 2738949055 1127
43 iso_pu_bacteria 2775507266 2778178298 1127
44 iso_pu_bacteria 2818991453 2819640239 1127
45 iso_pu_bacteria 2838035591 2838036643 1127
46 iso_pu_bacteria 2838661181 2838662332 1127
47 iso_pu_bacteria 2842475841 2842479502 1127
48 iso_pu_bacteria 2842502639 2842506832 1127
49 iso_pu_bacteria 2852387548 2852395094 1127
50 iso_pu_bacteria 2919408235 2919412656 1127
51 iso_pu_bacteria 2929138655 2929144218 1127
52 iso_pu_bacteria 2933016740 2933021085 1127
53 iso_pu_bacteria 3005416602 3005421178 1127
54 iso_pu_bacteria 8005314921 8005319087 1127
55 iso_pu_bacteria 8005484373 8005489590 1127
56 iso_pu_bacteria 8005682033 8005684100 1127
57 iso_pu_bacteria 8046767195 8046772709 1127
58 iso_pu_bacteria 8057575449 8057581747 1127
59 3300038705 Ga0237819_01906 Ga0237819_01906_940_4326 1128
60 iso_pu_bacteria 2545555834 2545679192 1128
61 iso_pu_bacteria 2599185352 2600196827 1128
62 iso_pu_bacteria 2643221557 2643808832 1128
63 iso_pu_bacteria 2643221626 2644146773 1128
64 iso_pu_bacteria 2643221723 2644677374 1128
65 iso_pu_bacteria 2844163670 2844166017 1128
66 iso_pu_bacteria 641522639 641644718 1128
67 iso_pu_bacteria 643348564 643602157 1128
68 3300048907 Ga0496104_0003562 Ga0496104_0003562_1507_4908 1129
69 3300048915 Ga0496112_0038600 Ga0496112_0038600_816_4217 1129
70 iso_pu_bacteria 2595698237 2596373495 1129
71 iso_pu_bacteria 2721755686 2723575111 1129
72 iso_pu_bacteria 2847670302 2847672285 1129
73 iso_pu_bacteria 2856314179 2856315280 1129
74 iso_pu_bacteria 2871488783 2871492594 1129
75 iso_pu_bacteria 2878035449 2878041106 1129
76 iso_pu_bacteria 2878753008 2878758475 1129
77 iso_pu_bacteria 2881845957 2881848119 1129
78 iso_pu_bacteria 2882632389 2882638962 1129
79 iso_pu_bacteria 2885350715 2885350804 1129
80 iso_pu_bacteria 2889306138 2889306913 1129
81 iso_pu_bacteria 2902330777 2902336489 1129
82 iso_pu_bacteria 2902405164 2902411619 1129
83 iso_pu_bacteria 2903492973 2903496674 1129
84 iso_pu_bacteria 2906414383 2906415277 1129
85 iso_pu_bacteria 2924784321 2924785052 1129
86 iso_pu_bacteria 2928125067 2928128613 1129
87 iso_pu_bacteria 2961127735 2961128867 1129
88 iso_pu_bacteria 2961170736 2961173330 1129
89 iso_pu_bacteria 2967996073 2967998501 1129
90 iso_pu_bacteria 2968003550 2968006073 1129
91 iso_pu_bacteria 2970503327 2970505924 1129
92 iso_pu_bacteria 2977821940 2977827009 1129
93 iso_pu_bacteria 2979808191 2979810645 1129
94 iso_pu_bacteria 8004374579 8004379992 1129
95 3300031238 Ga0265332_10001854 Ga0265332_100018548 1130
96 3300031247 Ga0265340_10005856 Ga0265340_100058563 1130
97 3300031712 Ga0265342_10000146 Ga0265342_1000014618 1130
98 3300036712 Ga0316584_0011580 Ga0316584_0011580_46_3756 1130
99 3300046460 Ga0495638_0000031 Ga0495638_0000031_117660_121055 1130
100 3300046460 Ga0495638_0000053 Ga0495638_0000053_150831_154226 1130
101 3300046522 Ga0495643_0003413 Ga0495643_0003413_4845_8240 1130
102 3300046522 Ga0495643_0005205 Ga0495643_0005205_2134_5529 1130
103 3300046558 Ga0495633_0002078 Ga0495633_0002078_6043_9438 1130
104 3300046810 Ga0495660_0000001 Ga0495660_0000001_1133346_1136741 1130
105 3300047470 Ga0495681_0000079 Ga0495681_0000079_14227_17622 1130
106 3300047472 Ga0495686_0004268 Ga0495686_0004268_3896_7291 1130
107 iso_pu_bacteria 2856320880 2856327831 1130
108 iso_pu_bacteria 2869278585 2869279780 1130
109 iso_pu_bacteria 2874139085 2874145726 1130
110 iso_pu_bacteria 2878738818 2878740376 1130
111 iso_pu_bacteria 2888337043 2888342742 1130
112 iso_pu_bacteria 2924718760 2924719167 1130
113 iso_pu_bacteria 2924776078 2924777977 1130
114 iso_pu_bacteria 2937877337 2937884539 1130
115 iso_pu_bacteria 2937972304 2937980562 1130
116 iso_pu_bacteria 2958034702 2958035648 1130
117 iso_pu_bacteria 2958041894 2958044680 1130
118 iso_pu_bacteria 2958064165 2958066766 1130
119 iso_pu_bacteria 2958084443 2958091850 1130
120 iso_pu_bacteria 2958092219 2958098024 1130
121 iso_pu_bacteria 2958144490 2958149698 1130
122 iso_pu_bacteria 2968016561 2968021662 1130
123 iso_pu_bacteria 2970469710 2970476659 1130
124 iso_pu_bacteria 2970593180 2970594380 1130
125 iso_pu_bacteria 2996348954 2996356082 1130
126 iso_pu_bacteria 3004275668 3004282396 1130
127 3300002737 JGI25162J39368_1000222 JGI25162J39368_10002228 1131
128 3300002774 JGI25150J39212_1000016 JGI25150J39212_100001691 1131
129 3300003187 JGI25151J46595_10000073 JGI25151J46595_1000007342 1131
130 3300003214 JGI25165J46597_1001319 JGI25165J46597_10013195 1131
131 3300003215 JGI25153J46596_10001135 JGI25153J46596_1000113514 1131
132 3300025233 Ga0209437_100040 Ga0209437_100040235 1131
133 3300025245 Ga0207425_1000054 Ga0207425_100005493 1131
134 3300025258 Ga0209129_1000108 Ga0209129_100010893 1131
135 3300025261 Ga0209233_1000051 Ga0209233_1000051236 1131
136 3300025294 Ga0209025_1000189 Ga0209025_100018993 1131
137 3300025297 Ga0209758_1000162 Ga0209758_100016261 1131
138 3300046557 Ga0495622_0003033 Ga0495622_0003033_675_4070 1131
139 3300048924 Ga0496121_0000033 Ga0496121_0000033_256015_259410 1131
140 3300048926 Ga0496123_0023722 Ga0496123_0023722_572_3967 1131
141 3300048928 Ga0496125_0000152 Ga0496125_0000152_43331_46726 1131
142 3300053148 Ga0500590_000252 Ga0500590_000252_9407_12802 1131
143 iso_pu_bacteria 2643221734 2644734612 1131
144 iso_pu_bacteria 2643221736 2644745961 1131
145 iso_pu_bacteria 2842698319 2842699812 1131
146 iso_pu_bacteria 2917699015 2917703713 1131
147 3300025284 Ga0209130_1000257 Ga0209130_100025750 1132
148 3300025292 Ga0209676_1000680 Ga0209676_100068035 1132
149 3300025294 Ga0209025_1000301 Ga0209025_100030148 1132
150 3300025295 Ga0209564_1000449 Ga0209564_100044962 1132
151 3300025298 Ga0209050_1002323 Ga0209050_10023238 1132
152 3300025299 Ga0209256_1001649 Ga0209256_100164910 1132
153 3300025302 Ga0207426_1000413 Ga0207426_100041348 1132
154 3300025303 Ga0209051_1003258 Ga0209051_10032588 1132
155 3300048911 Ga0496108_0003447 Ga0496108_0003447_5089_8490 1133
156 3300048912 Ga0496109_0026038 Ga0496109_0026038_1796_5197 1133
157 3300048913 Ga0496110_0000498 Ga0496110_0000498_20010_23411 1133
158 3300048914 Ga0496111_0007935 Ga0496111_0007935_2783_6184 1133
159 3300048915 Ga0496112_0006934 Ga0496112_0006934_4487_7888 1133
160 3300007076 Ga0075435_100045104 Ga0075435_1000451041 1134
161 3300009147 Ga0114129_10029138 Ga0114129_100291387 1134
162 iso_pu_bacteria 2509276022 2509393016 1134
163 3300013250 Ga0171462_1055 Ga0171462_105529 1135
164 3300035170 Ga0373943_0000185 Ga0373943_0000185_5316_8723 1135
165 3300035171 Ga0373946_0001621 Ga0373946_0001621_812_4219 1135
166 3300035692 Ga0373935_0003389 Ga0373935_0003389_5619_9026 1135
167 3300035695 Ga0373927_0000434 Ga0373927_0000434_9098_12505 1135
168 3300035695 Ga0373927_0009924 Ga0373927_0009924_1142_4570 1135
169 3300045051 Ga0451576_0012958 Ga0451576_0012958_467_3883 1135
170 3300046476 Ga0495662_0002257 Ga0495662_0002257_5427_8834 1135
171 3300046477 Ga0495664_0003373 Ga0495664_0003373_1588_4995 1135
172 3300046514 Ga0495618_0003711 Ga0495618_0003711_298_3705 1135
173 3300046533 Ga0495640_0006568 Ga0495640_0006568_5627_9034 1135
174 3300046535 Ga0495586_0005871 Ga0495586_0005871_2046_5453 1135
175 3300046689 Ga0495613_0005693 Ga0495613_0005693_133_3540 1135
176 3300046690 Ga0495624_0000948 Ga0495624_0000948_9092_12499 1135
177 3300047319 Ga0495674_0006441 Ga0495674_0006441_5646_9053 1135
178 3300053077 Ga0495601_0009511 Ga0495601_0009511_1198_4605 1135
179 3300053078 Ga0495612_0000688 Ga0495612_0000688_5955_9362 1135
180 3300053085 Ga0495619_0002604 Ga0495619_0002604_3222_6629 1135
181 iso_pu_bacteria 2891088606 2891092434 1135
182 iso_pu_bacteria 8002060224 8002061007 1135
183 3300025297 Ga0209758_1000760 Ga0209758_100076020 1136
184 3300048917 Ga0496114_0019166 Ga0496114_0019166_374_3793 1136
185 3300005340 Ga0070689_100000823 Ga0070689_10000082310 1137
186 3300005365 Ga0070688_100002337 Ga0070688_1000023373 1137
187 3300025936 Ga0207670_10001432 Ga0207670_100014324 1137
188 3300031241 Ga0265325_10000031 Ga0265325_100000314 1137
189 3300048915 Ga0496112_0010849 Ga0496112_0010849_467_3904 1137
190 3300049588 Ga0501072_0002839 Ga0501072_0002839_6681_10100 1137
191 3300060353 Ga0501082_0002683 Ga0501082_0002683_2147_5614 1137
192 3300005981 Ga0081538_10002208 Ga0081538_100022082 1138
193 3300048914 Ga0496111_0022440 Ga0496111_0022440_430_3858 1138
194 3300049823 Ga0501044_0001075 Ga0501044_0001075_18435_21872 1138
195 3300050507 nmdc:mga05p37_5608_c1 nmdc:mga05p37_5608_c1_5775_9218 1138
196 3300002070 JGI24750J21931_1000736 JGI24750J21931_10007362 1139
197 3300002077 JGI24744J21845_10001447 JGI24744J21845_100014472 1139
198 3300005331 Ga0070670_100024922 Ga0070670_1000249224 1139
199 3300005365 Ga0070688_100009277 Ga0070688_1000092772 1139
200 3300005434 Ga0070709_10003578 Ga0070709_100035787 1139
201 3300005436 Ga0070713_100017533 Ga0070713_1000175332 1139
202 3300005436 Ga0070713_100029620 Ga0070713_1000296202 1139
203 3300005441 Ga0070700_100002912 Ga0070700_1000029124 1139
204 3300005455 Ga0070663_100022173 Ga0070663_1000221732 1139
205 3300005616 Ga0068852_100010507 Ga0068852_1000105073 1139
206 3300005618 Ga0068864_100024614 Ga0068864_1000246144 1139
207 3300005842 Ga0068858_100025546 Ga0068858_1000255463 1139
208 3300005843 Ga0068860_100030473 Ga0068860_1000304732 1139
209 3300005937 Ga0081455_10001183 Ga0081455_1000118328 1139
210 3300025900 Ga0207710_10006125 Ga0207710_100061252 1139
211 3300025901 Ga0207688_10002461 Ga0207688_100024612 1139
212 3300025903 Ga0207680_10010209 Ga0207680_100102094 1139
213 3300025904 Ga0207647_10011095 Ga0207647_100110955 1139
214 3300025908 Ga0207643_10000233 Ga0207643_1000023321 1139
215 3300025910 Ga0207684_10009926 Ga0207684_100099266 1139
216 3300025915 Ga0207693_10008217 Ga0207693_100082175 1139
217 3300025918 Ga0207662_10001110 Ga0207662_100011105 1139
218 3300025926 Ga0207659_10026920 Ga0207659_100269202 1139
219 3300025928 Ga0207700_10011128 Ga0207700_100111283 1139
220 3300025933 Ga0207706_10003976 Ga0207706_1000397613 1139
221 3300025942 Ga0207689_10028272 Ga0207689_100282722 1139
222 3300026067 Ga0207678_10031616 Ga0207678_100316162 1139
223 3300026075 Ga0207708_10000911 Ga0207708_100009119 1139
224 3300026078 Ga0207702_10031977 Ga0207702_100319772 1139
225 3300026095 Ga0207676_10024568 Ga0207676_100245682 1139
226 3300026118 Ga0207675_100021570 Ga0207675_1000215703 1139
227 3300026121 Ga0207683_10004734 Ga0207683_100047349 1139
228 3300028381 Ga0268264_10021359 Ga0268264_100213592 1139
229 3300031239 Ga0265328_10000008 Ga0265328_10000008143 1139
230 3300031250 Ga0265331_10000889 Ga0265331_100008893 1139
231 3300037068 Ga0373925_0004820 Ga0373925_0004820_2594_6013 1139
232 3300046689 Ga0495613_0010848 Ga0495613_0010848_1044_4463 1139
233 3300048907 Ga0496104_0000436 Ga0496104_0000436_5310_8741 1139
234 3300048907 Ga0496104_0004893 Ga0496104_0004893_6756_10175 1139
235 3300048908 Ga0496105_0027492 Ga0496105_0027492_858_4277 1139
236 3300048909 Ga0496106_0010368 Ga0496106_0010368_2266_5685 1139
237 3300048910 Ga0496107_0013188 Ga0496107_0013188_1003_4422 1139
238 3300048913 Ga0496110_0044489 Ga0496110_0044489_412_3831 1139
239 3300048914 Ga0496111_0012132 Ga0496111_0012132_651_4070 1139
240 3300048915 Ga0496112_0016869 Ga0496112_0016869_2246_5665 1139
241 3300048918 Ga0496115_0035092 Ga0496115_0035092_65_3484 1139
242 3300049580 Ga0501046_0000011 Ga0501046_0000011_18224_21658 1139
243 3300049589 Ga0501073_0016033 Ga0501073_0016033_417_3857 1139
244 3300049822 Ga0501035_0033214 Ga0501035_0033214_879_4319 1139
245 3300050493 nmdc:mga0k408_8220_c1 nmdc:mga0k408_8220_c1_914_4336 1139

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01553

Acyltransferase

Acyltransferase

422

546

0.95

PF00501

AMP-binding

AMP-binding enzyme

621

976

0.84

PF07690

MFS_1

Major Facilitator Superfamily

57

405

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wv5-assembly2.cif.gz_B complex structure of vinn with 3-methylaspartate 0.8883 626 989
3wvn-assembly2.cif.gz_B complex structure of vinn with l-aspartate 0.8844 626 989
3ipl-assembly3.cif.gz_C crystal structure of o-succinylbenzoic acid-coa ligase from staphylococcus aureus subsp. aureus mu50 0.8777 633 1021
3wv4-assembly2.cif.gz_B crystal structure of vinn 0.8658 626 1020
3ipl-assembly3.cif.gz_C crystal structure of o-succinylbenzoic acid-coa ligase from staphylococcus aureus subsp. aureus mu50 0.8638 633 1021
ID Description Score Start End Superfamily
af_P31119_222_618_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9583 646 1030 3.40.50.12780
af_P31119_619_716_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9493 1031 1127 3.30.300.30
af_P31119_619_716_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.931 1031 1127 3.30.300.30
af_P31119_222_618_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9277 646 1030 3.40.50.12780
3wvnB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.8844 626 989 3.40.50.12780
ID Description Score Start End GO Terms
AF-A0A257WU83-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.8895 56 412 GO:0005886
GO:0022857
AF-A0A6I6D4S7-F1-model_v4 MFS transporter 0.8793 1 421 GO:0005886
GO:0022857
AF-A0A257WU83-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.8566 56 412 GO:0005886
GO:0022857
AF-A0A6I6D4S7-F1-model_v4 MFS transporter 0.8521 1 421 GO:0005886
GO:0022857
AF-A0A7Z9WMD3-F1-model_v4 MFS transporter 0.8515 2 192 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
85.01 0.72 High
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Predicted Structure (AlphaFold2)

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